Cmc02g0042891 (gene) Melon (Charmono) v1.1

Overview
NameCmc02g0042891
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionReverse transcriptase
LocationCMiso1.1chr02: 4834057 .. 4835325 (+)
RNA-Seq ExpressionCmc02g0042891
SyntenyCmc02g0042891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCAAGCGAGCTAAAAGAATTAAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCATCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAACGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATAAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAACTAGTATTTTTTGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAAACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAACTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAATATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGATGAGTTAA

mRNA sequence

ATGGCTCCAAGCGAGCTAAAAGAATTAAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCATCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAACGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATAAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAACTAGTATTTTTTGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAAACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAACTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAATATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGATGAGTTAA

Coding sequence (CDS)

ATGGCTCCAAGCGAGCTAAAAGAATTAAAGATGCAGTTACAAGAACTAGTTGACAAGGGATACATCAGGCCTAGTGTTTCGCCGTGGGGAGCATCAGTGCTTTTTGTGAAAAAGAAAGATGGTACCCTCAGATTATGTATTGACTATAGACAGTTAAACAAGGTTACAATACGTAACAAGTATCCTTTACCACGCATCGATGACTTATTTGATCAACTAAGGGGAGCAACGTTGTTCTCTAAGATTGACTTAAGGTCAGGATACCACCAGTTGAAGGTTAGAGAATCAGATATTGCTAAGACAGCATTTAGAACGAGGTATGGGCATTATGAGTTTCGAGTTATGCCATTTGGTTTAACGAATGCGCCAGCGGTTTTCATGGATCTCATGAACAGGATCTTCCATCGGTATTTAGATAAGTTTGTGATTGTGTTCATTGATGATATATTAGTTTACTCAGTTGACAGAGAATCTCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGAAAAACAGTTATACGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAACTAGTATTTTTTGGGCATGTAGTTTCAGCAAAAGGAGTTAGTGTCGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAAACCAATTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCTCGATTGGCATTGCCTTTGACCGCTTTGACAAGGAAGAATGTTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTTACAGCACCTATTTTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAAGGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAAAAAGAACTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAATATCATCCAGGTAAGGCCAACGTAGTAGCAGATGCATTAAGTAGGAAGTCAAGACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGATGAGTTAA

Protein sequence

MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALLMS
Homology
[Close]
BLAST of Cmc02g0042891 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 9.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 326 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 385

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 386 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 445

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 446 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 505

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 506 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 565

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 566 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 625

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 626 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 685

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 686 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 745

[Close]
BLAST of Cmc02g0042891 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 9.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
            KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

[Close]
BLAST of Cmc02g0042891 vs. NCBI nr
Match: KAA0062270.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 9.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 563 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 622

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 623 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 682

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 683 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 742

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 743 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 802

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 803 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 862

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 863 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 922

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 923 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 982

[Close]
BLAST of Cmc02g0042891 vs. NCBI nr
Match: KAA0036676.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 843.2 bits (2177), Expect = 9.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 266 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 325

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 326 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 385

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 386 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 445

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 446 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 505

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 506 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 565

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 566 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 625

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 626 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 685

[Close]
BLAST of Cmc02g0042891 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 841.3 bits (2172), Expect = 3.7e-240
Identity = 413/420 (98.33%), Postives = 416/420 (99.05%), Query Frame = 0 

Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGA LFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
            KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

[Close]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.1e-88
Identity = 157/403 (38.96%), Postives = 254/403 (63.03%), Query Frame = 0 

Query: 7   KELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGT-----LRLCIDYRQLNKVTIRNKY 66
           +E++ Q+Q+++++G IR S SP+ + +  V KK         R+ IDYR+LN++T+ +++
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 67  PLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTN 126
           P+P +D++  +L     F+ IDL  G+HQ+++    ++KTAF T++GHYE+  MPFGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 127 APAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSK 186
           APA F   MN I    L+K  +V++DDI+V+S   + H + L +V + L +  L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 187 CEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFS 246
           CEF  ++  F GHV++  G+  +P+K+EA+  +  P    E+++FLGL GYYR+FI +F+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 247 RLALPLTALTRKNVKFEWSD-KCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 306
            +A P+T   +KN+K + ++ + + +F++LK  +   PIL +P   K + +  DAS + L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 307 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 366
           G VL QDG+ ++Y SR L EHE NY T + EL A+V A K +RHYL      I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 367 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR 404
            +++  K+ N +  RW   + ++D  I+Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 320.9 bits (821), Expect = 2.2e-86
Identity = 162/403 (40.20%), Postives = 251/403 (62.28%), Query Frame = 0 

Query: 8   ELKMQLQELVDKGYIRPSVSPWGASVLFVKKKD-----GTLRLCIDYRQLNKVTIRNKYP 67
           E++ Q+QE++++G IR S SP+ +    V KK         R+ IDYR+LN++TI ++YP
Sbjct: 221 EVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVIDYRKLNEITIPDRYP 280

Query: 68  LPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNA 127
           +P +D++  +L     F+ IDL  G+HQ+++ E  I+KTAF T+ GHYE+  MPFGL NA
Sbjct: 281 IPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKSGHYEYLRMPFGLRNA 340

Query: 128 PAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKC 187
           PA F   MN I    L+K  +V++DDI+++S     H   +++V   L +  L  +  KC
Sbjct: 341 PATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADANLKLQLDKC 400

Query: 188 EFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFSR 247
           EF  ++  F GH+V+  G+  +P KV+A+V++  P    E+R+FLGL GYYR+FI +++ 
Sbjct: 401 EFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFIPNYAD 460

Query: 248 LALPLTALTRKNVKFEWSDKCE--QSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 307
           +A P+T+  +K  K + + K E  ++F++LK  ++  PIL LP   K +V+  DAS L L
Sbjct: 461 IAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLTTDASNLAL 520

Query: 308 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 367
           G VL Q+G+ I++ SR L +HE NY   + EL A+V A K +RHYL   +  I +DH+ L
Sbjct: 521 GAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFLIASDHQPL 580

Query: 368 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR 404
           +++ + KE   +  RW   + +Y   I+Y  GK N VADALSR
Sbjct: 581 RWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 309.3 bits (791), Expect = 6.7e-83
Identity = 167/417 (40.05%), Postives = 248/417 (59.47%), Query Frame = 0 

Query: 8   ELKMQLQELVDKGYIRPSVSPWGASVLFVKKK-----DGTLRLCIDYRQLNKVTIRNKYP 67
           E++ Q+ EL+  G IRPS SP+ + +  V KK     +   R+ +D+++LN VTI + YP
Sbjct: 138 EVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYP 197

Query: 68  LPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNA 127
           +P I+     L  A  F+ +DL SG+HQ+ ++ESDI KTAF T  G YEF  +PFGL NA
Sbjct: 198 IPDINATLASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNA 257

Query: 128 PAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKC 187
           PA+F  +++ I   ++ K   V+IDDI+V+S D ++H ++LR+VL +L +  L     K 
Sbjct: 258 PAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKS 317

Query: 188 EFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFSR 247
            F   Q+ F G++V+A G+  DP+KV A+     P S  E++ FLG+  YYR+FI+D+++
Sbjct: 318 HFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAK 377

Query: 248 LALPLTALTR---KNVKFEWSDKCE--------QSFQELKKRLVTAPILALPVTGKDYVI 307
           +A PLT LTR    N+K   S K          QSF +LK  L ++ ILA P   K + +
Sbjct: 378 VAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHL 437

Query: 308 YCDASRLGLGCVLMQD----GNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF 367
             DAS   +G VL QD       IAY SR L + E NY T + E+ A++ +L   R YL+
Sbjct: 438 TTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLY 497

Query: 368 -REKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR 404
                 ++TDH+ L +    +  N + +RW   I++Y+C + Y PGK+NVVADALSR
Sbjct: 498 GAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 3.2e-77
Identity = 159/404 (39.36%), Postives = 242/404 (59.90%), Query Frame = 0 

Query: 7    KELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI 66
            +E+   +Q+L+D  +I PS SP  + V+ V KKDGT RLC+DYR LNK TI + +PLPRI
Sbjct: 636  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 695

Query: 67   DDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F
Sbjct: 696  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 755

Query: 127  MDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWL 186
               M   F     +FV V++DDIL++S   E H +HL  VL+ L+ + L  K  KC+F  
Sbjct: 756  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 815

Query: 187  EQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFSRLALP 246
            E+  F G+ +  + ++    K  A+ ++  P +  + + FLG+  YYRRFI + S++A P
Sbjct: 816  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 875

Query: 247  LTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLM 306
            +        K +W++K +++ ++LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 876  IQLFICD--KSQWTEKQDKAIEKLKAALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 935

Query: 307  QDGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKS 366
            +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L  +   + TDH S
Sbjct: 936  EVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHIS 995

Query: 367  LKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR 404
            L  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Sbjct: 996  LLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISR 1034

[Close]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 289.7 bits (740), Expect = 5.5e-77
Identity = 159/404 (39.36%), Postives = 241/404 (59.65%), Query Frame = 0 

Query: 7    KELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNKYPLPRI 66
            +E+   +Q+L+D  +I PS SP  + V+ V KKDGT RLC+DYR LNK TI + +PLPRI
Sbjct: 610  QEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRI 669

Query: 67   DDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLTNAPAVF 126
            D+L  ++  A +F+ +DL SGYHQ+ +   D  KTAF T  G YE+ VMPFGL NAP+ F
Sbjct: 670  DNLLSRIGNAQIFTTLDLHSGYHQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTF 729

Query: 127  MDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFSKCEFWL 186
               M   F     +FV V++DDIL++S   E H +HL  VL+ L+ + L  K  KC+F  
Sbjct: 730  ARYMADTFRDL--RFVNVYLDDILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFAS 789

Query: 187  EQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDFSRLALP 246
            E+  F G+ +  + ++    K  A+ ++  P +  + + FLG+  YYRRFI + S++A P
Sbjct: 790  EETEFLGYSIGIQKIAPLQHKCAAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQP 849

Query: 247  LTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGK-DYVIYCDASRLGLGCVLM 306
            +        K +W++K +++  +LK  L  +P+L +P   K +Y +  DAS+ G+G VL 
Sbjct: 850  IQLFICD--KSQWTEKQDKAIDKLKDALCNSPVL-VPFNNKANYRLTTDASKDGIGAVLE 909

Query: 307  QDGN------VIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKS 366
            +  N      V+ Y S+ L+  + NYP  +LEL  ++ AL  +R+ L  +   + TDH S
Sbjct: 910  EVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHIS 969

Query: 367  LKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSR 404
            L  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR
Sbjct: 970  LLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISR 1008

[Close]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match: A0A5A7T3K4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00170 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 4.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 266 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 325

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 326 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 385

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 386 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 445

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 446 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 505

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 506 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 565

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 566 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 625

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 626 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 685

[Close]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match: A0A5A7U819 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G001730 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 4.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 326 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 385

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 386 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 445

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 446 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 505

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 506 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 565

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 566 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 625

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 626 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 685

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 686 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 745

[Close]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match: A0A5A7VNK4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold271G002190 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 4.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 665  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 724

Query: 61   YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 725  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 784

Query: 121  NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 785  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 844

Query: 181  KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 845  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 904

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 905  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 964

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 965  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 1024

Query: 361  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
            KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 1025 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1084

[Close]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match: A0A5A7V4W9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold679G00400 PE=4 SV=1)

HSP 1 Score: 843.2 bits (2177), Expect = 4.8e-241
Identity = 414/420 (98.57%), Postives = 417/420 (99.29%), Query Frame = 0 

Query: 1   MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
           MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 563 MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 622

Query: 61  YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
           YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 623 YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 682

Query: 121 NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
           NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 683 NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 742

Query: 181 KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
           KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 743 KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 802

Query: 241 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
           SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 803 SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 862

Query: 301 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
           GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 863 GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 922

Query: 361 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
           KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 923 KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 982

[Close]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 841.3 bits (2172), Expect = 1.8e-240
Identity = 413/420 (98.33%), Postives = 416/420 (99.05%), Query Frame = 0 

Query: 1    MAPSELKELKMQLQELVDKGYIRPSVSPWGASVLFVKKKDGTLRLCIDYRQLNKVTIRNK 60
            MAPSELKELKMQLQELVDKGYIRPSVSPWGA VLFVKKKDGTLRLCIDYRQLNKVTIRNK
Sbjct: 627  MAPSELKELKMQLQELVDKGYIRPSVSPWGAPVLFVKKKDGTLRLCIDYRQLNKVTIRNK 686

Query: 61   YPLPRIDDLFDQLRGATLFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 120
            YPLPRIDDLFDQLRGA LFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT
Sbjct: 687  YPLPRIDDLFDQLRGAALFSKIDLRSGYHQLKVRESDIAKTAFRTRYGHYEFRVMPFGLT 746

Query: 121  NAPAVFMDLMNRIFHRYLDKFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 180
            NAPAVFMDLMNRIFHRYLD+FVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS
Sbjct: 747  NAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQLYAKFS 806

Query: 181  KCEFWLEQLVFFGHVVSAKGVSVDPQKVEAVVNWEKPISATEVRSFLGLAGYYRRFIEDF 240
            KCEFWLEQ+VF GHVVSAKGVSVDPQKVEAVVNWE+PISATEVRSFLGLAGYYRRFIEDF
Sbjct: 807  KCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYRRFIEDF 866

Query: 241  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 300
            SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL
Sbjct: 867  SRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGL 926

Query: 301  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFREKCHIFTDHKSL 360
            GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLF EKCHIFTDHKSL
Sbjct: 927  GCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTDHKSL 986

Query: 361  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 420
            KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL
Sbjct: 987  KYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCGIRVALL 1046

[Close]
BLAST of Cmc02g0042891 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.0e-26
Identity = 55/124 (44.35%), Postives = 81/124 (65.32%), Query Frame = 0 

Query: 162 HLRIVLQTLREKQLYAKFSKCEFWLEQLVFFG--HVVSAKGVSVDPQKVEAVVNWEKPIS 221
           HL +VLQ   + Q YA   KC F   Q+ + G  H++S +GVS DP K+EA+V W +P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 222 ATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPI 281
            TE+R FLGL GYYRRF++++ ++  PLT L +KN   +W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKN-SLKWTEMAALAFKALKGAVTTLPV 122

Query: 282 LALP 284
           LALP
Sbjct: 123 LALP 125

The following BLAST results are available for this feature:
BLAST of Cmc02g0042891 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050527.19.8e-24198.57DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0066849.19.8e-24198.57DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0062270.19.8e-24198.57DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0036676.19.8e-24198.57DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
KAA0035455.13.7e-24098.33DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1... [more]
BLAST of Cmc02g0042891 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P043234.1e-8838.96Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast... [more]
P208252.2e-8640.20Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste... [more]
Q8I7P96.7e-8340.05Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast... [more]
Q7LHG53.2e-7739.36Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
Q993155.5e-7739.36Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20... [more]
BLAST of Cmc02g0042891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T3K44.8e-24198.57Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51... [more]
A0A5A7U8194.8e-24198.57Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17... [more]
A0A5A7VNK44.8e-24198.57Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold27... [more]
A0A5A7V4W94.8e-24198.57Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67... [more]
A0A5A7U2V71.8e-24098.33Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37... [more]
BLAST of Cmc02g0042891 vs. TAIR 10
Match NameE-valueIdentityDescription
ATMG00860.12.0e-2644.35DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 61..196
e-value: 1.6E-84
score: 284.4
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 206..287
e-value: 2.1E-31
score: 109.8
NoneNo IPR availableGENE3D3.10.20.370coord: 288..354
e-value: 4.8E-6
score: 28.4
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 1..121
e-value: 1.6E-84
score: 284.4
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 2..384
NoneNo IPR availablePANTHERPTHR24559:SF324TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEINcoord: 2..384
NoneNo IPR availableCDDcd01647RT_LTRcoord: 20..196
e-value: 1.53666E-92
score: 274.858
NoneNo IPR availableCDDcd09274RNase_HI_RT_Ty3coord: 290..404
e-value: 8.5883E-57
score: 180.766
IPR041373Reverse transcriptase, RNase H-like domainPFAMPF17917RT_RNaseHcoord: 287..383
e-value: 3.8E-31
score: 107.5
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 36..195
e-value: 1.8E-28
score: 99.6
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 17..196
score: 14.041365
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..389

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc02g0042891.1Cmc02g0042891.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006278 RNA-dependent DNA biosynthetic process
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0003964 RNA-directed DNA polymerase activity
molecular_function GO:0008270 zinc ion binding