Homology
BLAST of Cmc02g0042191 vs. NCBI nr
Match:
TYK21506.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 413.7 bits (1062), Expect = 1.0e-111
Identity = 200/223 (89.69%), Postives = 211/223 (94.62%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLANNTRPDI FSVNLLARYSYSPTKRHWN +KHVL YLRGTIDMGLFYSNKSNFDL+G
Sbjct: 37 MYLANNTRPDIAFSVNLLARYSYSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVG 96
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA +LSDPHKAR QTGYLFTC GTAISW S+KQTMTATSSNH EILAI EASRECVWL
Sbjct: 97 YADAGHLSDPHKARSQTGYLFTCEGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWL 156
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMTH+IRETCGLSF+KNLPTILFEDNTACI QIKGGYIKGD+TKHIS KLFYTHDL+EN
Sbjct: 157 RSMTHYIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYTHDLEEN 216
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKELK 224
G+ISVQQISSKDNL DLFTKALLTSTFEKLVHNIGMR+L+ELK
Sbjct: 217 GDISVQQISSKDNLVDLFTKALLTSTFEKLVHNIGMRQLRELK 259
BLAST of Cmc02g0042191 vs. NCBI nr
Match:
KAA0067250.1 (Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa])
HSP 1 Score: 393.3 bits (1009), Expect = 1.4e-105
Identity = 193/223 (86.55%), Postives = 203/223 (91.03%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
M LANNTRPDI FSVNLLARYS SPTKRHWN +KHVL YLRGTIDM LFYSNKSNFDL+G
Sbjct: 47 MCLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVG 106
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDP KAR Q GYLFT GGTAISW S+KQTMTATSSNH EILAI E SRECVWL
Sbjct: 107 YADAGYLSDPDKARSQIGYLFTWGGTAISWRSVKQTMTATSSNHAEILAIHEVSRECVWL 166
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMTHHIRETCGLSF+KNLPTILFEDNTACIAQIKGGYIKGD+TKH+S KLFYTH+L+EN
Sbjct: 167 RSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKGGYIKGDRTKHMSPKLFYTHELEEN 226
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKELK 224
G+ISVQQISSKDNL DLFTKAL T TFEKLVHNIGM RL+ELK
Sbjct: 227 GDISVQQISSKDNLVDLFTKALPTPTFEKLVHNIGMGRLRELK 269
BLAST of Cmc02g0042191 vs. NCBI nr
Match:
ERM98543.1 (hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda])
HSP 1 Score: 354.4 bits (908), Expect = 7.3e-94
Identity = 171/222 (77.03%), Postives = 189/222 (85.14%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLAR+S +PT RHW IKH+L YL+GTID GLFYSN L+G
Sbjct: 59 MYLANCTRPDIAFSVNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCGSQLIG 118
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHKAR QTGYLFTCG TAISW S KQT+ ATSSNH EILAI EASRECVWL
Sbjct: 119 YADAGYLSDPHKARSQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWL 178
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMT HIR TCGL+ NK +PTIL+EDN ACIAQ+KGGYIKGD+TKHIS K F+TH+L+EN
Sbjct: 179 RSMTQHIRGTCGLTSNKEVPTILYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHNLQEN 238
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G+I VQQI S DNLADLFTK+L TSTFEK+VH IGMRRLK+L
Sbjct: 239 GDIDVQQIRSSDNLADLFTKSLPTSTFEKMVHKIGMRRLKDL 280
BLAST of Cmc02g0042191 vs. NCBI nr
Match:
KAF7137709.1 (hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii])
HSP 1 Score: 352.1 bits (902), Expect = 3.6e-93
Identity = 171/222 (77.03%), Postives = 188/222 (84.68%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLARYS +PT+RHW IKH+ YLRGTID+GLFYSN S L+G
Sbjct: 986 MYLANCTRPDIAFSVNLLARYSSAPTQRHWKGIKHIFRYLRGTIDLGLFYSNGSASQLIG 1045
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHKAR QTGY+FTCGG AISW S+KQT+TATSSNH EI+AI E SRECVWL
Sbjct: 1046 YADAGYLSDPHKARSQTGYVFTCGGAAISWRSVKQTLTATSSNHSEIIAIHETSRECVWL 1105
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSM HIRE CGLS K+ PTIL+EDN ACI QIKGGYIKGD+TKHIS K FYTHDL++N
Sbjct: 1106 RSMIQHIREKCGLSSIKDCPTILYEDNAACITQIKGGYIKGDRTKHISPKFFYTHDLQKN 1165
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G+I VQQI S DNLADLFTKAL T+TF+KLV NIGMRRLK L
Sbjct: 1166 GDIDVQQIRSSDNLADLFTKALPTTTFKKLVANIGMRRLKNL 1207
BLAST of Cmc02g0042191 vs. NCBI nr
Match:
RVW59189.1 (Copia protein [Vitis vinifera])
HSP 1 Score: 346.3 bits (887), Expect = 2.0e-91
Identity = 167/222 (75.23%), Postives = 186/222 (83.78%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLARYS +PT+RHWN IKH+L YLRGT DMGLFYS +S LLG
Sbjct: 594 MYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLG 653
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHK R QTGY+F C GTAISW S+KQTM ATSSNH EILAI EASREC+WL
Sbjct: 654 YADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWL 713
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSM HIRE+CGLS K PT LFEDN ACIAQI GGYIKGD+TKHIS K FYTH+L+++
Sbjct: 714 RSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKS 773
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G I VQQI S DNLADLFTK+L TSTF+KL+H IGMR+LK++
Sbjct: 774 GEIDVQQIRSSDNLADLFTKSLPTSTFKKLIHRIGMRQLKDI 815
BLAST of Cmc02g0042191 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 123.2 bits (308), Expect = 3.6e-27
Identity = 72/219 (32.88%), Postives = 113/219 (51.60%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFD--L 60
MY+ TRPD+T +VN+L+RYS W +K VL YL+GTIDM L + F+ +
Sbjct: 1189 MYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKI 1248
Query: 61 LGYADARYLSDPHKARYQTGYLFTCGGTAISWWSIK-QTMTATSSNHVEILAIREASREC 120
+GY D+ + + TGYLF + W+ K Q A SS E +A+ EA RE
Sbjct: 1249 IGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREA 1308
Query: 121 VWLRSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDL 180
+WL+ + ++ P ++EDN CI+ I + KHI +K + +
Sbjct: 1309 LWLKFL------LTSINIKLENPIKIYEDNQGCIS-IANNPSCHKRAKHIDIKYHFAREQ 1368
Query: 181 KENGNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGM 217
+N I ++ I +++ LAD+FTK L + F +L +G+
Sbjct: 1369 VQNNVICLEYIPTENQLADIFTKPLPAARFVELRDKLGL 1400
BLAST of Cmc02g0042191 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 114.0 bits (284), Expect = 2.2e-24
Identity = 70/216 (32.41%), Postives = 110/216 (50.93%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MY TRPDI +V +++R+ +P K HW +K +L YLRGT L + S+ L G
Sbjct: 1119 MYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGG-SDPILKG 1178
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
Y DA D + TGYLFT G AISW S Q A S+ E +A E +E +WL
Sbjct: 1179 YTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWL 1238
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
+ + GL + +++ D+ + I K +TKHI ++ + ++ ++
Sbjct: 1239 KRFLQEL----GLHQKE---YVVYCDSQSAIDLSKNSMYHA-RTKHIDVRYHWIREMVDD 1298
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGM 217
++ V +IS+ +N AD+ TK + + FE +GM
Sbjct: 1299 ESLKVLKISTNENPADMLTKVVPRNKFELCKELVGM 1325
BLAST of Cmc02g0042191 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 3.7e-24
Identity = 65/210 (30.95%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 7 TRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLGYADARY 66
TRPD++++VN L++Y + PT HWN +K VL YL GT D G+F + L Y+DA +
Sbjct: 1241 TRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADW 1300
Query: 67 LSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWLRSMTHH 126
D GY+ G ISW S KQ SS E ++ S E W+ S+
Sbjct: 1301 AGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTE 1360
Query: 127 IRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKENGNISVQ 186
L + P +++ DN + + + KHI+L + + ++G + V
Sbjct: 1361 ------LGIQLSHPPVIYCDNVGA-TYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVV 1420
Query: 187 QISSKDNLADLFTKALLTSTFEKLVHNIGM 217
+S+ D LAD TK L F+ IG+
Sbjct: 1421 HVSTHDQLADTLTKPLSRVAFQNFSRKIGV 1443
BLAST of Cmc02g0042191 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 106.7 bits (265), Expect = 3.5e-22
Identity = 61/213 (28.64%), Postives = 100/213 (46.95%), Query Frame = 0
Query: 7 TRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLGYADARY 66
TRPDI+++VN L+++ + PT+ H +K +L YL GT + G+F + L Y+DA +
Sbjct: 1258 TRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADW 1317
Query: 67 LSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWLRSMTHH 126
D GY+ G ISW S KQ SS E ++ S E W+ S+
Sbjct: 1318 AGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTE 1377
Query: 127 IRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKENGNISVQ 186
L P +++ DN + + + KHI++ + + ++G + V
Sbjct: 1378 ------LGIRLTRPPVIYCDNVGA-TYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVV 1437
Query: 187 QISSKDNLADLFTKALLTSTFEKLVHNIGMRRL 220
+S+ D LAD TK L + F+ IG+ R+
Sbjct: 1438 HVSTHDQLADTLTKPLSRTAFQNFASKIGVTRV 1463
BLAST of Cmc02g0042191 vs. ExPASy Swiss-Prot
Match:
P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 49/128 (38.28%), Postives = 70/128 (54.69%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYL TRPD+ +V +L++++ P HW +K VL YL+ T GL ++ L+G
Sbjct: 14 MYLMVVTRPDLAAAVGVLSQFASDPCPTHWQALKRVLRYLQSTQTYGLEFTRAGTAKLVG 73
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
Y+DA + D R +GYLF G +SW S KQ A SS E +A+ EA++E VWL
Sbjct: 74 YSDADWAGDVESRRSTSGYLFKLNGGCVSWRSKKQRTVALSSTEDEYMALSEATQEAVWL 133
Query: 121 RSMTHHIR 129
T +
Sbjct: 134 TVRTRRTK 141
BLAST of Cmc02g0042191 vs. ExPASy TrEMBL
Match:
A0A5D3DD63 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold518G00010 PE=4 SV=1)
HSP 1 Score: 413.7 bits (1062), Expect = 4.9e-112
Identity = 200/223 (89.69%), Postives = 211/223 (94.62%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLANNTRPDI FSVNLLARYSYSPTKRHWN +KHVL YLRGTIDMGLFYSNKSNFDL+G
Sbjct: 37 MYLANNTRPDIAFSVNLLARYSYSPTKRHWNGVKHVLRYLRGTIDMGLFYSNKSNFDLVG 96
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA +LSDPHKAR QTGYLFTC GTAISW S+KQTMTATSSNH EILAI EASRECVWL
Sbjct: 97 YADAGHLSDPHKARSQTGYLFTCEGTAISWRSVKQTMTATSSNHAEILAIHEASRECVWL 156
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMTH+IRETCGLSF+KNLPTILFEDNTACI QIKGGYIKGD+TKHIS KLFYTHDL+EN
Sbjct: 157 RSMTHYIRETCGLSFSKNLPTILFEDNTACITQIKGGYIKGDRTKHISPKLFYTHDLEEN 216
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKELK 224
G+ISVQQISSKDNL DLFTKALLTSTFEKLVHNIGMR+L+ELK
Sbjct: 217 GDISVQQISSKDNLVDLFTKALLTSTFEKLVHNIGMRQLRELK 259
BLAST of Cmc02g0042191 vs. ExPASy TrEMBL
Match:
A0A5D3CKU4 (Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1)
HSP 1 Score: 393.3 bits (1009), Expect = 6.9e-106
Identity = 193/223 (86.55%), Postives = 203/223 (91.03%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
M LANNTRPDI FSVNLLARYS SPTKRHWN +KHVL YLRGTIDM LFYSNKSNFDL+G
Sbjct: 47 MCLANNTRPDIAFSVNLLARYSSSPTKRHWNGVKHVLRYLRGTIDMSLFYSNKSNFDLVG 106
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDP KAR Q GYLFT GGTAISW S+KQTMTATSSNH EILAI E SRECVWL
Sbjct: 107 YADAGYLSDPDKARSQIGYLFTWGGTAISWRSVKQTMTATSSNHAEILAIHEVSRECVWL 166
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMTHHIRETCGLSF+KNLPTILFEDNTACIAQIKGGYIKGD+TKH+S KLFYTH+L+EN
Sbjct: 167 RSMTHHIRETCGLSFSKNLPTILFEDNTACIAQIKGGYIKGDRTKHMSPKLFYTHELEEN 226
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKELK 224
G+ISVQQISSKDNL DLFTKAL T TFEKLVHNIGM RL+ELK
Sbjct: 227 GDISVQQISSKDNLVDLFTKALPTPTFEKLVHNIGMGRLRELK 269
BLAST of Cmc02g0042191 vs. ExPASy TrEMBL
Match:
U5CXL6 (Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s04311p00004950 PE=4 SV=1)
HSP 1 Score: 354.4 bits (908), Expect = 3.5e-94
Identity = 171/222 (77.03%), Postives = 189/222 (85.14%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLAR+S +PT RHW IKH+L YL+GTID GLFYSN L+G
Sbjct: 59 MYLANCTRPDIAFSVNLLARFSSAPTYRHWKGIKHILRYLQGTIDKGLFYSNNCGSQLIG 118
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHKAR QTGYLFTCG TAISW S KQT+ ATSSNH EILAI EASRECVWL
Sbjct: 119 YADAGYLSDPHKARSQTGYLFTCGDTAISWRSTKQTLVATSSNHAEILAIHEASRECVWL 178
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSMT HIR TCGL+ NK +PTIL+EDN ACIAQ+KGGYIKGD+TKHIS K F+TH+L+EN
Sbjct: 179 RSMTQHIRGTCGLTSNKEVPTILYEDNAACIAQLKGGYIKGDRTKHISPKFFFTHNLQEN 238
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G+I VQQI S DNLADLFTK+L TSTFEK+VH IGMRRLK+L
Sbjct: 239 GDIDVQQIRSSDNLADLFTKSLPTSTFEKMVHKIGMRRLKDL 280
BLAST of Cmc02g0042191 vs. ExPASy TrEMBL
Match:
A0A438ISJ0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_545 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 9.6e-92
Identity = 167/222 (75.23%), Postives = 186/222 (83.78%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLARYS +PT+RHWN IKH+L YLRGT DMGLFYS +S LLG
Sbjct: 649 MYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLG 708
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHK R QTGY+F C GTAISW S+KQTM ATSSNH EILAI EASREC+WL
Sbjct: 709 YADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWL 768
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSM HIRE+CGLS K PT LFEDN ACIAQI GGYIKGD+TKHIS K FYTH+L+++
Sbjct: 769 RSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKS 828
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G I VQQI S DNLADLFTK+L TSTF+KL+H IGMR+LK++
Sbjct: 829 GEIDVQQIRSSDNLADLFTKSLPTSTFKKLIHRIGMRQLKDI 870
BLAST of Cmc02g0042191 vs. ExPASy TrEMBL
Match:
A0A438FGR3 (Copia protein OS=Vitis vinifera OX=29760 GN=GIP_109 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 9.6e-92
Identity = 167/222 (75.23%), Postives = 186/222 (83.78%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYLAN TRPDI FSVNLLARYS +PT+RHWN IKH+L YLRGT DMGLFYS +S LLG
Sbjct: 594 MYLANCTRPDIAFSVNLLARYSSAPTRRHWNGIKHILRYLRGTTDMGLFYSRESKQQLLG 653
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
YADA YLSDPHK R QTGY+F C GTAISW S+KQTM ATSSNH EILAI EASREC+WL
Sbjct: 654 YADAGYLSDPHKGRSQTGYVFNCNGTAISWRSVKQTMVATSSNHSEILAIHEASRECIWL 713
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
RSM HIRE+CGLS K PT LFEDN ACIAQI GGYIKGD+TKHIS K FYTH+L+++
Sbjct: 714 RSMIQHIRESCGLSSIKGGPTTLFEDNAACIAQITGGYIKGDRTKHISPKFFYTHELQKS 773
Query: 181 GNISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
G I VQQI S DNLADLFTK+L TSTF+KL+H IGMR+LK++
Sbjct: 774 GEIDVQQIRSSDNLADLFTKSLPTSTFKKLIHRIGMRQLKDI 815
BLAST of Cmc02g0042191 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 99.0 bits (245), Expect = 5.2e-21
Identity = 72/228 (31.58%), Postives = 112/228 (49.12%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYL TR DI+F+VN L+++S +P H + +L Y++GT+ GLFYS+++ L
Sbjct: 386 MYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 445
Query: 61 YADARYLSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVWL 120
++DA + S R GY G + ISW S KQ + + SS E A+ A+ E +WL
Sbjct: 446 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWL 505
Query: 121 RSMTHHIRETCGLSFNKNLPTILFEDNTACIAQIKGGYIKGDKTKHISLKLFYTHDLKEN 180
++ L +K PT+LF DNTA I I + ++TKHI H ++E
Sbjct: 506 AQFFRELQ----LPLSK--PTLLFCDNTAAI-HIATNAVFHERTKHIESD---CHSVRER 565
Query: 181 G------NISVQQISSKDNLADLFTKALLTSTFEKLVHNIGMRRLKEL 223
+ S Q +D + + +L T +V G+ L+ L
Sbjct: 566 SVYQATLSYSFQAYDEQDGFTE-YLSPILRGTIMYIVSMFGLAGLEAL 601
BLAST of Cmc02g0042191 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 67.4 bits (163), Expect = 1.7e-11
Identity = 34/113 (30.09%), Postives = 58/113 (51.33%), Query Frame = 0
Query: 7 TRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLGYADARY 66
TRPDI+++VN++ + + PT ++ +K VL Y++GTI GL+ S ++ + D+ +
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172
Query: 67 LSDPHKARYQTGYLFTCGGTAISWWSIKQTMTATSSNHVEILAIREASRECVW 120
R TG+ G ISW + +Q + SS E A+ + E W
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
BLAST of Cmc02g0042191 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 61.6 bits (148), Expect = 9.1e-10
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
Query: 1 MYLANNTRPDITFSVNLLARYSYSPTKRHWNEIKHVLLYLRGTIDMGLFYSNKSNFDLLG 60
MYL TRPD+TF+VN L+++S + + VL Y++GT+ GLFYS S+ L
Sbjct: 1 MYL-TITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKA 60
Query: 61 YADARYLSDPHKARYQTGY 80
+AD+ + S P R TG+
Sbjct: 61 FADSDWASCPDTRRSVTGF 78
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK21506.1 | 1.0e-111 | 89.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KAA0067250.1 | 1.4e-105 | 86.55 | Pol [Cucumis melo var. makuwa] >TYK10859.1 Pol [Cucumis melo var. makuwa] | [more] |
ERM98543.1 | 7.3e-94 | 77.03 | hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda] | [more] |
KAF7137709.1 | 3.6e-93 | 77.03 | hypothetical protein RHSIM_Rhsim07G0041900 [Rhododendron simsii] | [more] |
RVW59189.1 | 2.0e-91 | 75.23 | Copia protein [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
P04146 | 3.6e-27 | 32.88 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P10978 | 2.2e-24 | 32.41 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q9ZT94 | 3.7e-24 | 30.95 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Q94HW2 | 3.5e-22 | 28.64 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
P0CV72 | 1.6e-19 | 38.28 | Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 P... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3DD63 | 4.9e-112 | 89.69 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CKU4 | 6.9e-106 | 86.55 | Pol OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold231G00300 PE=4 SV=1 | [more] |
U5CXL6 | 3.5e-94 | 77.03 | Uncharacterized protein (Fragment) OS=Amborella trichopoda OX=13333 GN=AMTR_s043... | [more] |
A0A438ISJ0 | 9.6e-92 | 75.23 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438FGR3 | 9.6e-92 | 75.23 | Copia protein OS=Vitis vinifera OX=29760 GN=GIP_109 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 5.2e-21 | 31.58 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 1.7e-11 | 30.09 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00240.1 | 9.1e-10 | 40.51 | Gag-Pol-related retrotransposon family protein | [more] |