Cmc01g0031981 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0031981
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr01: 32624877 .. 32626072 (+)
RNA-Seq Expression	Cmc01g0031981
Synteny	Cmc01g0031981

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCTAACCATTCATTTCTTCTCTCTACCTCTATCACCCATTTTTATGGCCTTCCTTTGGGACGTCTTCTGATTCTTCTTCAATCGCTAACCCTCCATCTCTCTCTCTCTCACAAGACAGATCCCTTTCTCCCTTCACATTCTTTTTCCGATTCCTATTCCGATCGTTCCAGAGGATTATTTCTCCATTATTATTATTATTAGTCCTTTCCCTCGGCGTCGTCTCCATGGGGAAGTTAGTCGAGATTCTTGACGCCGGTGCCAGGATTGTTGCCAGATTTCATTCCCATTGCCCTCAGACTGGTCGGATGTACTACCATCCTCCCGCTAACTCCGACGACGGCCATCACTCTGAAGAGTTTCGCCTCGGCGGCGGCGGCGGCGGCGGCGATGGCGATGCGGCGTCTCATCAGATTGTTCGTTGCGATGTTGCCGAGCGTACTGCTGCCGCCTTCTTAGTTGTCACCGTTGAGAGTAATGAGTTCATTCTTTACTCTGTCTGATTGTGATATTGTTTGAATGGAGAAGTTCTGGAATGTTCTTGTGAGAGAAATTCCTCTCCGATCGTGATATGAAAAATTGGAAAAATTAGTTTTGGATTTGTCTTTTCATTTTTTTAGAATTATTTTTTATATGCTTATTGTTGATGACACGATTTCGTTCGTTACGAGATGAGGACCGATCGTATTCTGATTCTTTGGATGAATGATTGACGAAATTCGAAATTGACGCTTTTCCGAATCTACCGATTTCTAGCTAAGTGTTCTTGCTATTGACTTATGAATTGATTGTTTAATGAATTAGTTTTATAAATTCTTTTCTGTCCCAAGAAATTAGGCGAGAATTTGTGGGGAAAAATGTTGTTTTCGTTTGGTAATAACGTGGAAAAGAAAAGAAAAGAAAAGAAAAGAATCTGAAGCGAATCAAACTTTCCATTTTTCCCCCTTTCTTACTTGTTTTGTTGTTATTAATTTTAGACAGAGAGAGGGAGAGGAAAACACGACTTTGCATTCAACCTCCAAATTACATTCATGAATGGCACTTTGAACAAAGGGAAAAAAACTTAACTTTTTGCTTTTTAAGATTTCGAATCCAAATTTAATTTCGTCATTAGGTTTTGAAATATTGTGTTTTTAAATTTTTACTTTTGTTTTTTATTTTAATTCCTTTGGAATATGGTTACCATCTATGTCTG

mRNA sequence

ATTCTCTAACCATTCATTTCTTCTCTCTACCTCTATCACCCATTTTTATGGCCTTCCTTTGGGACGTCTTCTGATTCTTCTTCAATCGCTAACCCTCCATCTCTCTCTCTCTCACAAGACAGATCCCTTTCTCCCTTCACATTCTTTTTCCGATTCCTATTCCGATCGTTCCAGAGGATTATTTCTCCATTATTATTATTATTAGTCCTTTCCCTCGGCGTCGTCTCCATGGGGAAGTTAGTCGAGATTCTTGACGCCGGTGCCAGGATTGTTGCCAGATTTCATTCCCATTGCCCTCAGACTGGTCGGATGTACTACCATCCTCCCGCTAACTCCGACGACGGCCATCACTCTGAAGAGTTTCGCCTCGGCGGCGGCGGCGGCGGCGGCGATGGCGATGCGGCGTCTCATCAGATTGTTCGTTGCGATGTTGCCGAGCGTACTGCTGCCGCCTTCTTAGTTGTCACCGTTGAGAAAGTTCTGGAATGTTCTTGTGAGAGAAATTCCTCTCCGATCGTGATATGAAAAATTGGAAAAATTAGTTTTGGATTTGTCTTTTCATTTTTTTAGAATTATTTTTTATATGCTTATTGTTGATGACACGATTTCGTTCGTTACGAGATGAGGACCGATCGTATTCTGATTCTTTGGATGAATGATTGACGAAATTCGAAATTGACGCTTTTCCGAATCTACCGATTTCTAGCTAAGTGTTCTTGCTATTGACTTATGAATTGATTGTTTAATGAATTAGTTTTATAAATTCTTTTCTGTCCCAAGAAATTAGGCGAGAATTTGTGGGGAAAAATGTTGTTTTCGTTTGGTAATAACGTGGAAAAGAAAAGAAAAGAAAAGAAAAGAATCTGAAGCGAATCAAACTTTCCATTTTTCCCCCTTTCTTACTTGTTTTGTTGTTATTAATTTTAGACAGAGAGAGGGAGAGGAAAACACGACTTTGCATTCAACCTCCAAATTACATTCATGAATGGCACTTTGAACAAAGGGAAAAAAACTTAACTTTTTGCTTTTTAAGATTTCGAATCCAAATTTAATTTCGTCATTAGGTTTTGAAATATTGTGTTTTTAAATTTTTACTTTTGTTTTTTATTTTAATTCCTTTGGAATATGGTTACCATCTATGTCTG

Coding sequence (CDS)

ATGGGGAAGTTAGTCGAGATTCTTGACGCCGGTGCCAGGATTGTTGCCAGATTTCATTCCCATTGCCCTCAGACTGGTCGGATGTACTACCATCCTCCCGCTAACTCCGACGACGGCCATCACTCTGAAGAGTTTCGCCTCGGCGGCGGCGGCGGCGGCGGCGATGGCGATGCGGCGTCTCATCAGATTGTTCGTTGCGATGTTGCCGAGCGTACTGCTGCCGCCTTCTTAGTTGTCACCGTTGAGAAAGTTCTGGAATGTTCTTGTGAGAGAAATTCCTCTCCGATCGTGATATGA

Protein sequence

MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAASHQIVRCDVAERTAAAFLVVTVEKVLECSCERNSSPIVI

Homology

[Close]

BLAST of Cmc01g0031981 vs. NCBI nr
Match: TYK10407.1 (hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 169.5 bits (428), Expect = 1.5e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 HQIVRCDVAERTAAAFLVVTVE 83
          HQIVRCDVAERTAAAFLVVTVE
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVE 82

[Close]

BLAST of Cmc01g0031981 vs. NCBI nr
Match: KAA0058604.1 (hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa])

HSP 1 Score: 160.6 bits (405), Expect = 6.8e-36
Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL  GGGGGDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL--GGGGGDGDAAS 60

Query: 61 HQIVRCDVAERTAAAFLVVTVE 83
          HQIVRCDVAERTAAAFLVVTVE
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVE 80

[Close]

BLAST of Cmc01g0031981 vs. NCBI nr
Match: KGN45108.1 (hypothetical protein Csa_015813 [Cucumis sativus])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 75/85 (88.24%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL  GGG GDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL--GGGVGDGDAAS 60

Query: 61 HQIVRCDVAERT---AAAFLVVTVE 83
          HQIV C VAE T   AAA LVVTVE
Sbjct: 61 HQIVPC-VAEPTAAAAAAVLVVTVE 82

[Close]

BLAST of Cmc01g0031981 vs. NCBI nr
Match: KAG7025639.1 (hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 109.4 bits (272), Expect = 1.8e-20
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS---EEFRLGGGGGGGDGD 60
          MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G  G  GD
Sbjct: 1  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGARG--GD 60

Query: 61 AASHQIVRCDV---AERTAAAFLV---VTVEKVLECSCE 91
           +S+QIVRCD    AE   AA ++   V+  +V+ C  E
Sbjct: 61 VSSNQIVRCDAEAEAEAAVAAAVLGGDVSSHQVIRCGAE 97

[Close]

BLAST of Cmc01g0031981 vs. NCBI nr
Match: KAG6593287.1 (hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 108.6 bits (270), Expect = 3.1e-20
Identity = 59/99 (59.60%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS---EEFRLGGGGGGGDGD 60
          MG+ +++LDA  RIVARFHSHCPQTGRMYYHPPANSDDGHHS   EE RLG G  G  GD
Sbjct: 1  MGRFIDVLDASVRIVARFHSHCPQTGRMYYHPPANSDDGHHSDNQEELRLGDGTRG--GD 60

Query: 61 AASHQIVRCDV---AERTAAAFLV---VTVEKVLECSCE 91
           +S+QIVRCD    AE   AA ++   V+  +V+ C  E
Sbjct: 61 VSSNQIVRCDAEAEAEAAVAAAVLGGDVSSHQVIRCGAE 97

[Close]

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL
Match: A0A5D3CEL3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00500 PE=4 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 7.1e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60

Query: 61 HQIVRCDVAERTAAAFLVVTVE 83
          HQIVRCDVAERTAAAFLVVTVE
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVE 82

[Close]

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL
Match: A0A5A7UTW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00730 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.3e-36
Identity = 80/82 (97.56%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL  GGGGGDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL--GGGGGDGDAAS 60

Query: 61 HQIVRCDVAERTAAAFLVVTVE 83
          HQIVRCDVAERTAAAFLVVTVE
Sbjct: 61 HQIVRCDVAERTAAAFLVVTVE 80

[Close]

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL
Match: A0A0A0K6I8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 5.1e-29
Identity = 75/85 (88.24%), Postives = 75/85 (88.24%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL  GGG GDGDAAS
Sbjct: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRL--GGGVGDGDAAS 60

Query: 61 HQIVRCDVAERT---AAAFLVVTVE 83
          HQIV C VAE T   AAA LVVTVE
Sbjct: 61 HQIVPC-VAEPTAAAAAAVLVVTVE 82

[Close]

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL
Match: A0A6J1JW88 (uncharacterized protein LOC111488441 OS=Cucurbita maxima OX=3661 GN=LOC111488441 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 8.2e-19
Identity = 54/85 (63.53%), Postives = 61/85 (71.76%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHS--EEFRLGGGGGGGDGDA 60
          MGK VEILDAG RIVARFHSHCPQT RMYYHPPANS++GHHS  +EFRL        GD 
Sbjct: 1  MGKFVEILDAGVRIVARFHSHCPQTARMYYHPPANSNEGHHSDLQEFRL------SSGDV 60

Query: 61 ASHQIVRCDVAERTAAAFLVVTVEK 84
          +SHQIV C      AAA + V+ E+
Sbjct: 61 SSHQIVPCS----AAAAVVAVSAER 75

[Close]

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL
Match: W9R4I1 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15
Identity = 43/66 (65.15%), Postives = 50/66 (75.76%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDGDAAS 60
          MGK VEILD G RIVARFHSHCPQT RMYYHPPAN+D+ HH+    L  GG GGDGD   
Sbjct: 1  MGKFVEILDQGVRIVARFHSHCPQTSRMYYHPPANADNNHHNNNHFLFYGGDGGDGDV-- 60

Query: 61 HQIVRC 67
           ++++C
Sbjct: 61 -KVMKC 63

[Close]

BLAST of Cmc01g0031981 vs. TAIR 10
Match: AT3G57450.1 (unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 32/56 (57.14%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 1  MGKLVEILDAGARIVARFHSHCPQTGRMYYHPPANSDDGHHSEEFRLGGGGGGGDG 57
          MGK  E+LD G RI ARFHSHCPQT R+YYHPP+++   H   +  +GGGG  G G
Sbjct: 1  MGKYTEMLDVGVRIAARFHSHCPQTARLYYHPPSDNHHHHGGVKDLIGGGGVLGSG 56

The following BLAST results are available for this feature:

BLAST of Cmc01g0031981 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK10407.1	1.5e-38	100.00	hypothetical protein E5676_scaffold459G00500 [Cucumis melo var. makuwa]	[more]
KAA0058604.1	6.8e-36	97.56	hypothetical protein E6C27_scaffold339G00730 [Cucumis melo var. makuwa]	[more]
KGN45108.1	1.1e-28	88.24	hypothetical protein Csa_015813 [Cucumis sativus]	[more]
KAG7025639.1	1.8e-20	59.60	hypothetical protein SDJN02_12136, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6593287.1	3.1e-20	59.60	hypothetical protein SDJN03_12763, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Cmc01g0031981 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc01g0031981 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CEL3	7.1e-39	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UTW3	3.3e-36	97.56	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0K6I8	5.1e-29	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426490 PE=4 SV=1	[more]
A0A6J1JW88	8.2e-19	63.53	uncharacterized protein LOC111488441 OS=Cucurbita maxima OX=3661 GN=LOC111488441...	[more]
W9R4I1	1.9e-15	65.15	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_004679 PE=4 SV=1	[more]

BLAST of Cmc01g0031981 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57450.1	1.1e-12	57.14	unknown protein; Has 65 Blast hits to 65 proteins in 11 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..56
None	No IPR available	PANTHER	PTHR33983:SF10	SUBFAMILY NOT NAMED	coord: 1..65
None	No IPR available	PANTHER	PTHR33983	OS07G0185900 PROTEIN	coord: 1..65

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0031981.1	Cmc01g0031981.1	mRNA