Cmc01g0028481 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0028481
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	auxin-binding protein T85
Location	CMiso1.1chr01: 29800107 .. 29804250 (-)
RNA-Seq Expression	Cmc01g0028481
Synteny	Cmc01g0028481

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCTAAATAGAAATTACGGAACTATCTGGAAGGGTATATAGAGTGAACGATTGATGAAGCACCAAAAATGGTGAAAGAGCAGCAAGCGACTAGATATCAATGGCGGGATTTTCCTTTTCTTTATCTTTTTGCTCAATTTTCCTCTTTGCAATCACTGAAGCATCCCGTTGTTCGATCATCGGTAATCACTTTTCTTCTTCCGCCTTCAATCTTGTCGCAGTTGTTGTTTCGTTGGTGTCATGGTCTCTGTGTACTCTGAAAAAGTGAATTCTGTCATATGGAATGCTTTTGACATTATATTGCCTTATATTTGAATCCTTTGGTTTCCATTTCGGTAGCTTTTGAAACCATTTTGACCATTAGGGACTTTGTTTCGTATTAACTAAGCGGCAAGCAACCAGGTCGATATTTCCTTTAGGTTTTTCATAGAATTTTTCGAGGATTTTGATGAATTTGGGAGGAAAATTCGTCATTTGAAGAAGGTTGCATGTTTATACTTGTCCTAAATTTTCCTAAACCAGTTTTAAGAAAGGTTACCCTGGCCGTACCACCGAGAGGCATCACTATGAGCACAAACGAAGTTGGTTCTTTCTTTTATTTTTTGGAATTTGATTCCATAAAAGAACTAGAACACCCTAAGAGCAGGGGTAGCGGGCACCCTTTTTAAAATTTACACAATGATAACCGTTCAATCATTGATAATCATCAAGAAGCTCTAATTACAATGAATGTTGTGTGTAAAGATACGCACCAAGGTGTATTTTGTGCAAGATTACTAAAAAGTAAAAATGTAAAGACTTAAAGGATCTCATATTTGTTTTTTCGATATATGCCACGAAAGAGCTATTGGCTTTCCCCATCAGATTCCACACCTTTAGGCCTTCCATAAGCCAATTTTCCATTATCCTGGCAAGGCAAGTAGAAACTCCCAGATTTCCAAACAAGGAATTCTACGAAACTGAAGATATTGTCTTGAATAATAATATTCATAAAATTGAGTTTCATATTTTCAGCGATACCTACATTGGGTTAAGTATCCTTTGTGCTTGTGTTTTAAGACTAGAGAAATGGTGGTTTTTGGTTTCAGGGTATTTCAGTATTGAACATATTATATCATGATAGCATTTAGGACAAAGAGCTACAAGTTTACAATCGAACTAATTGATGTTATGCTTTGTTTGAGTCTCCAAATTGTTGTCTACAAGCTTATATAACCTTTAAGCATTTGGATTTGGACCTAAGTGTTTTTATGTGTACTTGTAAAGTAAGAAAAATGATGGGGTGGCCTGAAGGCTGATCTTTATGCATCTGACTGACTTCTGTATGGTAGTTATCATCTTTTGTTCTTTTAAATGGATGTAAATTTTTTCCTTGATCCACAGGGTTGCCCCTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGCTGAAGGAGGTAAAGGTTCTAGGACTGAGTCAAGCGTCGTAATGAAACAGAAGATATATTTAATTCGCTTGGGCTAGCCATCACCGCTCTACTGGCTTTTGCAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCGCACACACCTATTCACAGGCACTCATGTGAAGAAGTTTTTGTGGTTCTGAAAGGGACTGGCACTCTCTATTTCGCTCCTAGTTCTCATGAAAAGTACCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCCGTTAATGATGCTCATCAGGTATGTTGATCTACTTAAATCTCCTCCTCGCTTCCCCAACCATCCATAATTGTGGCTTAGTTGATGTTCATCATTCTGCTTCCTTACATATTTTAGGGTAGTAAACCCAATAATTTCGTGCGAGTTGAATTAGGAAAATAACTCAAGTATAAAATGCCGATGTACCAGACACACGAAGGACCAATTGCTATCTTGAGATTTTTTGTTGCCATTCAAAAAGTATTGGAACGCTCTTGGAAGCCTTCTTTTCGAAAGTAGGTGAGGGTGGGGGGGTTCTTACTTTGTTAGGTGAAGTGTCGTGCAATATCCACTGTTTAAGGTTGAGTTGGGTAGCTAACTTGACTTGGAAAAGTCTCCTTCTAATGTGGTTTTGGAGGTTTCGTGGAGAATTTTCTTCTTCAAGGCAAAAGAATGTTTTGAGTGCGTTTAACCTTTACTTCAGTATTTGTGGGACTGCAAAAAGGCTTTTTAATGCTAAAAAGGTTGTTGTATATCCTATGAGTGTAGTGCATGCCAAAGAAGGGTGGCATCATAATGGTTGAGAAAGCAAACAATGAGTTGACTGTTTAAAATCAACTTATTTGTTACTCACGTGCTTTCTTTTCCTCAGACATTCATTTTCTTTTTCAGCCCATGCTATGGCTTTGTCTTTGCTTTAGAACTCTTCAAAACAAATTGCATTACAGCAACAATTACACCTTAGAAAGTTAAAATAAAGGATAAGGGAAAACTTAGAGAACATGCACCAAATTGAGAGTGGCGGTAAAAACTAGAAAACACAGAAAGACAAATCCGAAGATAACATCGACCAAATGTATACAACACAGTACTTCGTCTTACTGTCTTTGGGGAGTTGATGCCTTACCTCCCCTTCCCTTTGTATATCTTTCTTTAGGGAACAACAAATTTCTGTTTCCTCAATGGAAAAAAAAAAAGATATCAAAAGGAATGGGATTAAGGTTATATGTTCCTCTTCTTTTAGTATAACAAAGAATTATGAAATCTGGTGCTCAGGTGGAACCTTTCTCGTTTCCTTTCTTTAAAAAAGATGGAACATTTCTCCAGTGACTTTCTCCTCTGATCTGTGAACTGTGGACTGATGTGGATGGTATCATCAGTTTAAACCTCTGATCGTGCTTGAATTACTTTGTTTTACTAAGTTGCCCCCGCTTATACCTTATTTGGAACTTTTTTTCCAAAATATATTTTTTGGTTTAGCAAATAGACAACAGTGCTTGTATCAATCTTCAACTTGAACCAAGCCTCTGATTAACTTGAATGTTCATCCATTAACACAGGTTGGGAATACAAATGAACATGAGGATCTACAAATGCTTGTCATCATTTCTAGGCCACCAGCCAAAGTGTGTGTATTTTTCTTCCATTTTACATTATATGTTGCATCTGTATCTGTTTCTAAGCGATCAAAGACGAGTCTAACTTGAGCATTCGGTGGTTTAAGGTCCATTAATGAATTATACACTTGCTATTGCGCACACATACACAACATATACACCTAAGTTAATCTTACTTAAAAAATATGCTACTTAAAAGTACTTCAATCTCTTGAGGCAGTAATTTCAAGCTGTTGTTGGGGCTTAAGACTCTTGAACAACTAAAAATACTATTGGTTTAGAGCAAGGAATAAAAAGACTAAACGTCAAAGAAAATTAGTCTTCTATTTTTTCACTCGATTGTTTCTTTTTTGGTTTTTGCTTTCAGGTTTATTTATGATGATTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGACGAACAGTGTTTCGAAGCACCGCCAGTGAAGGACGAACTTTGATCACTTCGATGTTGTTCAAAGTTGTTTTGTCCTTGCACATGAAGTGTGAAGTCGTCGTACTCTCAAGAAAATAGTGGAAATATGTGGAACTTTAGTGTGAAGATCATTCAAATCTTCATTGTTCTACTTCTACCTCTACTTCATATTTCTGGTTTTGTTATGAAGTATCATATTCCCCAATCCTTCCTCATACCATAGGAATGACAAAAACTGGAGTGATTGTCATTTGCTCTACAAGATTTCTCCAATGGGCAGAAAAAAAGGGCAGTGAAAGATCTCACACAACATTTGAGACATTTGGTTGTGGATGAAAGATCTTCGTTCAGACCCAGTTTAGGTTCCCTTTGTGTGACATATATGTCATTTTGAAGTTTTGATAAGATATTTGTTTGTTAATAGATCAGTTTTCATTTATCACTTTATTGCGAAAGAGTTTTGATAAGATATTTATTTGAAAGAAAAACAAAAGTTGGGTTATGTTCTTATTGTTGGAAAAGTTAATGGATAAGATTTTGTTTTGATTCA

mRNA sequence

GTCTAAATAGAAATTACGGAACTATCTGGAAGGGTATATAGAGTGAACGATTGATGAAGCACCAAAAATGGTGAAAGAGCAGCAAGCGACTAGATATCAATGGCGGGATTTTCCTTTTCTTTATCTTTTTGCTCAATTTTCCTCTTTGCAATCACTGAAGCATCCCGTTGTTCGATCATCGGGTTGCCCCTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGCTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCGCACACACCTATTCACAGGCACTCATGTGAAGAAGTTTTTGTGGTTCTGAAAGGGACTGGCACTCTCTATTTCGCTCCTAGTTCTCATGAAAAGTACCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCCGTTAATGATGCTCATCAGGTTGGGAATACAAATGAACATGAGGATCTACAAATGCTTGTCATCATTTCTAGGCCACCAGCCAAAGTGTTTATTTATGATGATTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGACGAACAGTGTTTCGAAGCACCGCCAGTGAAGGACGAACTTTGATCACTTCGATGTTGTTCAAAGTTGTTTTGTCCTTGCACATGAAGTGTGAAGTCGTCGTACTCTCAAGAAAATAGTGGAAATATGTGGAACTTTAGTGTGAAGATCATTCAAATCTTCATTGTTCTACTTCTACCTCTACTTCATATTTCTGGTTTTGTTATGAAGTATCATATTCCCCAATCCTTCCTCATACCATAGGAATGACAAAAACTGGAGTGATTGTCATTTGCTCTACAAGATTTCTCCAATGGGCAGAAAAAAAGGGCAGTGAAAGATCTCACACAACATTTGAGACATTTGGTTGTGGATGAAAGATCTTCGTTCAGACCCAGTTTAGGTTCCCTTTGTGTGACATATATGTCATTTTGAAGTTTTGATAAGATATTTGTTTGTTAATAGATCAGTTTTCATTTATCACTTTATTGCGAAAGAGTTTTGATAAGATATTTATTTGAAAGAAAAACAAAAGTTGGGTTATGTTCTTATTGTTGGAAAAGTTAATGGATAAGATTTTGTTTTGATTCA

Coding sequence (CDS)

ATGGCGGGATTTTCCTTTTCTTTATCTTTTTGCTCAATTTTCCTCTTTGCAATCACTGAAGCATCCCGTTGTTCGATCATCGGGTTGCCCCTAGTAAGAAATATCAGTGAGCTTCCACAAGATAACTATGGAAGGGGAGGCTTGTCTCACATTACTGTTGCAGGTTCATTATTGCATGGGCTGAAGGAGGTGGAGGTGTGGCTCCAAACATTTTCTCCTGGATCGCACACACCTATTCACAGGCACTCATGTGAAGAAGTTTTTGTGGTTCTGAAAGGGACTGGCACTCTCTATTTCGCTCCTAGTTCTCATGAAAAGTACCCTGGAACACCAAAAGAATTTCCTATCTATTCAAACAGTACATTTCTCATACCCGTTAATGATGCTCATCAGGTTGGGAATACAAATGAACATGAGGATCTACAAATGCTTGTCATCATTTCTAGGCCACCAGCCAAAGTGTTTATTTATGATGATTGGTTCATGCCCCACACTGCTGCAAGATTGAAGTTCCCTTACTATTGGGACGAACAGTGTTTCGAAGCACCGCCAGTGAAGGACGAACTTTGA

Protein sequence

MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL

Homology

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BLAST of Cmc01g0028481 vs. NCBI nr
Match: XP_008451403.1 (PREDICTED: auxin-binding protein T85 [Cucumis melo])

HSP 1 Score: 399.1 bits (1024), Expect = 2.2e-107
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAGFSF+LSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EAPPVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Cmc01g0028481 vs. NCBI nr
Match: XP_004148870.1 (auxin-binding protein T85 [Cucumis sativus] >KGN44857.1 hypothetical protein Csa_015544 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.1e-103
Identity = 183/189 (96.83%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MA FS +LSFCSIFLFAI EASRCSIIG+PLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAVFSLALSFCSIFLFAIAEASRCSIIGVPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEK PGTPKEFPIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKCPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EAPPVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Cmc01g0028481 vs. NCBI nr
Match: XP_038896169.1 (auxin-binding protein T85 [Benincasa hispida])

HSP 1 Score: 371.7 bits (953), Expect = 3.8e-99
Identity = 178/189 (94.18%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG S +LSFC IFLFAI+EASRCSIIGLPLVRNISELPQDNYGRGG SHITVAGSLLHG
Sbjct: 3   MAGLSLALSFCLIFLFAISEASRCSIIGLPLVRNISELPQDNYGRGGFSHITVAGSLLHG 62

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGS TPIHRHSCEEVFVVLKGTGTLY APSSHEKYPGTPKEFPIYSNS
Sbjct: 63  LKEVEVWLQTFSPGSRTPIHRHSCEEVFVVLKGTGTLYLAPSSHEKYPGTPKEFPIYSNS 122

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQV NTNEHEDLQML IISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 123 TFLIPVNDAHQVWNTNEHEDLQMLAIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 182

Query: 181 EAPPVKDEL 190
           EA PVKDEL
Sbjct: 183 EA-PVKDEL 190

[Close]

BLAST of Cmc01g0028481 vs. NCBI nr
Match: XP_022992557.1 (auxin-binding protein T85 [Cucurbita maxima])

HSP 1 Score: 356.3 bits (913), Expect = 1.6e-94
Identity = 172/189 (91.01%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG S +LS C IFL AI+EASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+ APSSH KYPGTPKEF IYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+ NTNEHEDLQMLVIISRPPAKVFIYDDW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EA PVKDEL
Sbjct: 181 EA-PVKDEL 188

[Close]

BLAST of Cmc01g0028481 vs. NCBI nr
Match: XP_022150242.1 (auxin-binding protein T85 isoform X2 [Momordica charantia])

HSP 1 Score: 354.4 bits (908), Expect = 6.2e-94
Identity = 169/189 (89.42%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG   +L FCSIF  AI+EASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLY AP SHEKYPGTPKEF IYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF+IP+NDAHQV NTNEHEDLQMLVIISRPPAKVFIY+DW MPHTAARLKFPY WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPPVKDEL 190
           E PPVKDEL
Sbjct: 181 E-PPVKDEL 188

[Close]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot
Match: P33490 (Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 6.3e-81
Identity = 134/178 (75.28%), Postives = 153/178 (85.96%), Query Frame = 0


Query: 12  SIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTF 71
           ++ LFA  EAS+CSI GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF
Sbjct: 10  AVLLFATAEASQCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTF 69

Query: 72  SPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQ 131
           +PGS TPIHRHSCEE+FVVLKG G LY  PSSH KYPG P+EF I+ NSTF IPVND HQ
Sbjct: 70  APGSRTPIHRHSCEEIFVVLKGQGILYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQ 129

Query: 132 VGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 190
           V NT EHEDLQ+LV+ISRPP KVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 130 VWNTGEHEDLQVLVVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSWKDEL 187

[Close]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot
Match: P33491 (Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 5.9e-79
Identity = 131/178 (73.60%), Postives = 150/178 (84.27%), Query Frame = 0


Query: 12  SIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTF 71
           ++F FA  EAS CSI GLPLVRNISELPQ+NYGR GLSH T+AGS+LHG+KE+EVWLQTF
Sbjct: 10  AVFWFATAEASHCSINGLPLVRNISELPQENYGRSGLSHTTIAGSVLHGMKEIEVWLQTF 69

Query: 72  SPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQ 131
           +PG  TPIHRHSCEE+F+VLKG GTLY  PSSH KYPG P+EF I+ NSTF IPVND HQ
Sbjct: 70  APGFRTPIHRHSCEEIFIVLKGQGTLYLTPSSHSKYPGNPQEFHIFPNSTFHIPVNDVHQ 129

Query: 132 VGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 190
           V NT E EDLQ+L +ISRPP KVF+YDDW MPHTAA+LKFPYYWDE+C++    KDEL
Sbjct: 130 VWNTGEQEDLQVLDVISRPPVKVFMYDDWSMPHTAAKLKFPYYWDEECYQTTSRKDEL 187

[Close]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot
Match: P33487 (Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 2.4e-72
Identity = 129/184 (70.11%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 6   FSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVE 65
           FS++    +    +  + C I GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEVE
Sbjct: 18  FSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEVE 77

Query: 66  VWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIP 125
           +WLQTF+PGS TPIHRHSCEEVFVVLKG+GTLY A  +H  +PG P EFPI++NST  IP
Sbjct: 78  IWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHIP 137

Query: 126 VNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPV 185
           +NDAHQV NT  HEDLQ+LVIISRPP K+FIY+DWFMPHTAARLKFPYYWDEQC +    
Sbjct: 138 INDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQ- 197

Query: 186 KDEL 190
           KDEL
Sbjct: 198 KDEL 198

[Close]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot
Match: P33488 (Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.2e-65
Identity = 115/159 (72.33%), Postives = 128/159 (80.50%), Query Frame = 0


Query: 31  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVV 90
           LVR+IS + Q NYGR G SHITV G+L HG KEVEVWLQTF PG  TPIHRHSCEEVF+V
Sbjct: 49  LVRDISRMQQRNYGREGFSHITVTGALAHGTKEVEVWLQTFGPGQRTPIHRHSCEEVFIV 108

Query: 91  LKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRP 150
           LKG GTL    SS  KYPG P+E P++ N+TF IPVND HQV N+NEHEDLQ+LVIISRP
Sbjct: 109 LKGKGTLLLG-SSSLKYPGQPQEVPVFQNTTFSIPVNDPHQVWNSNEHEDLQVLVIISRP 168

Query: 151 PAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 190
           P K+FIYDDW MPHTAA+LKFPY+WDE C  AP  KDEL
Sbjct: 169 PVKIFIYDDWSMPHTAAKLKFPYFWDEDCLPAP--KDEL 204

[Close]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot
Match: P13689 (Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 9.1e-64
Identity = 115/159 (72.33%), Postives = 130/159 (81.76%), Query Frame = 0


Query: 31  LVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVEVWLQTFSPGSHTPIHRHSCEEVFVV 90
           LVR+IS++PQ +YG  GLSHITVAG+L HG+KEVEVWLQT SPG  TPIHRHSCEEVF V
Sbjct: 46  LVRDISQMPQSSYGIEGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTV 105

Query: 91  LKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIPVNDAHQVGNTNEHEDLQMLVIISRP 150
           LKG GTL    SS  KYPG P+E P + N+TF IPVND HQV N++EHEDLQ+LVIISRP
Sbjct: 106 LKGKGTLLMG-SSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHEDLQVLVIISRP 165

Query: 151 PAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPVKDEL 190
           PAK+F+YDDW MPHTAA LKFP+ WDE CFEA   KDEL
Sbjct: 166 PAKIFLYDDWSMPHTAAVLKFPFVWDEDCFEA--AKDEL 201

[Close]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL
Match: A0A1S3BS71 (auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 1.1e-107
Identity = 188/189 (99.47%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAGFSF+LSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAGFSFALSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EAPPVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL
Match: A0A0A0K905 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.5e-104
Identity = 183/189 (96.83%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MA FS +LSFCSIFLFAI EASRCSIIG+PLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAVFSLALSFCSIFLFAIAEASRCSIIGVPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEK PGTPKEFPIYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKCPGTPKEFPIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF
Sbjct: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EAPPVKDEL
Sbjct: 181 EAPPVKDEL 189

[Close]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL
Match: A0A6J1JQ76 (auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 7.9e-95
Identity = 172/189 (91.01%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG S +LS C IFL AI+EASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTL+ APSSH KYPGTPKEF IYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+ NTNEHEDLQMLVIISRPPAKVFIYDDW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYDDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EA PVKDEL
Sbjct: 181 EA-PVKDEL 188

[Close]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL
Match: A0A6J1DA75 (auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018456 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 3.0e-94
Identity = 169/189 (89.42%), Postives = 175/189 (92.59%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG   +L FCSIF  AI+EASRCSI GLPLVRNISELPQDNYGRGGLSHITVAGS+LHG
Sbjct: 1   MAGLHLALIFCSIFFPAISEASRCSITGLPLVRNISELPQDNYGRGGLSHITVAGSILHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLY AP SHEKYPGTPKEF IYSNS
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYLAPESHEKYPGTPKEFSIYSNS 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF+IP+NDAHQV NTNEHEDLQMLVIISRPPAKVFIY+DW MPHTAARLKFPY WDEQCF
Sbjct: 121 TFIIPINDAHQVWNTNEHEDLQMLVIISRPPAKVFIYNDWSMPHTAARLKFPYSWDEQCF 180

Query: 181 EAPPVKDEL 190
           E PPVKDEL
Sbjct: 181 E-PPVKDEL 188

[Close]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL
Match: A0A6J1GNG5 (auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 5.1e-94
Identity = 170/189 (89.95%), Postives = 176/189 (93.12%), Query Frame = 0


Query: 1   MAGFSFSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60
           MAG S +LS C IFL AI+EASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG
Sbjct: 1   MAGLSLALSLCLIFLPAISEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHG 60

Query: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNS 120
           LKEVEVWLQTFSPGSHTPIHRHSCEEVF+VLKGTGTL+ APSSH KYPGTPKEF IYSN 
Sbjct: 61  LKEVEVWLQTFSPGSHTPIHRHSCEEVFLVLKGTGTLFLAPSSHGKYPGTPKEFSIYSNC 120

Query: 121 TFLIPVNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCF 180
           TF IPVNDAHQ+ NTNEHEDLQMLVIISRPPAKVFIY+DW MPHTAARLKFPYYWDEQCF
Sbjct: 121 TFHIPVNDAHQIWNTNEHEDLQMLVIISRPPAKVFIYEDWAMPHTAARLKFPYYWDEQCF 180

Query: 181 EAPPVKDEL 190
           EA PVKDEL
Sbjct: 181 EA-PVKDEL 188

[Close]

BLAST of Cmc01g0028481 vs. TAIR 10
Match: AT4G02980.1 (endoplasmic reticulum auxin binding protein 1 )

HSP 1 Score: 273.1 bits (697), Expect = 1.7e-73
Identity = 129/184 (70.11%), Postives = 151/184 (82.07%), Query Frame = 0


Query: 6   FSLSFCSIFLFAITEASRCSIIGLPLVRNISELPQDNYGRGGLSHITVAGSLLHGLKEVE 65
           FS++    +    +  + C I GLP+VRNIS+LPQDNYGR GLSH+TVAGS+LHG+KEVE
Sbjct: 18  FSVALLLFYFSETSLGAPCPINGLPIVRNISDLPQDNYGRPGLSHMTVAGSVLHGMKEVE 77

Query: 66  VWLQTFSPGSHTPIHRHSCEEVFVVLKGTGTLYFAPSSHEKYPGTPKEFPIYSNSTFLIP 125
           +WLQTF+PGS TPIHRHSCEEVFVVLKG+GTLY A  +H  +PG P EFPI++NST  IP
Sbjct: 78  IWLQTFAPGSETPIHRHSCEEVFVVLKGSGTLYLA-ETHGNFPGKPIEFPIFANSTIHIP 137

Query: 126 VNDAHQVGNTNEHEDLQMLVIISRPPAKVFIYDDWFMPHTAARLKFPYYWDEQCFEAPPV 185
           +NDAHQV NT  HEDLQ+LVIISRPP K+FIY+DWFMPHTAARLKFPYYWDEQC +    
Sbjct: 138 INDAHQVKNTG-HEDLQVLVIISRPPIKIFIYEDWFMPHTAARLKFPYYWDEQCIQESQ- 197

Query: 186 KDEL 190
           KDEL
Sbjct: 198 KDEL 198

The following BLAST results are available for this feature:

BLAST of Cmc01g0028481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451403.1	2.2e-107	99.47	PREDICTED: auxin-binding protein T85 [Cucumis melo]	[more]
XP_004148870.1	1.1e-103	96.83	auxin-binding protein T85 [Cucumis sativus] >KGN44857.1 hypothetical protein Csa...	[more]
XP_038896169.1	3.8e-99	94.18	auxin-binding protein T85 [Benincasa hispida]	[more]
XP_022992557.1	1.6e-94	91.01	auxin-binding protein T85 [Cucurbita maxima]	[more]
XP_022150242.1	6.2e-94	89.42	auxin-binding protein T85 isoform X2 [Momordica charantia]	[more]

BLAST of Cmc01g0028481 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P33490	6.3e-81	75.28	Auxin-binding protein T85 OS=Nicotiana tabacum OX=4097 GN=T85 PE=3 SV=1	[more]
P33491	5.9e-79	73.60	Auxin-binding protein T92 OS=Nicotiana tabacum OX=4097 GN=T92 PE=3 SV=1	[more]
P33487	2.4e-72	70.11	Auxin-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=ERABP1 PE=1 SV=1	[more]
P33488	8.2e-65	72.33	Auxin-binding protein 4 OS=Zea mays OX=4577 GN=ABP4 PE=2 SV=1	[more]
P13689	9.1e-64	72.33	Auxin-binding protein 1 OS=Zea mays OX=4577 GN=ABP1 PE=1 SV=1	[more]

BLAST of Cmc01g0028481 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BS71	1.1e-107	99.47	auxin-binding protein T85 OS=Cucumis melo OX=3656 GN=6D05 PE=4 SV=1	[more]
A0A0A0K905	5.5e-104	96.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G392300 PE=4 SV=1	[more]
A0A6J1JQ76	7.9e-95	91.01	auxin-binding protein T85 OS=Cucurbita maxima OX=3661 GN=LOC111488844 PE=4 SV=1	[more]
A0A6J1DA75	3.0e-94	89.42	auxin-binding protein T85 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1GNG5	5.1e-94	89.95	auxin-binding protein T85 OS=Cucurbita moschata OX=3662 GN=LOC111456045 PE=4 SV=...	[more]

BLAST of Cmc01g0028481 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02980.1	1.7e-73	70.11	endoplasmic reticulum auxin binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000526	Auxin-binding protein	PRINTS	PR00655	AUXINBINDNGP	coord: 50..70 score: 81.82 coord: 160..179 score: 82.27 coord: 117..132 score: 71.02 coord: 30..49 score: 75.0 coord: 104..117 score: 59.09 coord: 138..160 score: 82.21 coord: 73..97 score: 86.18
IPR000526	Auxin-binding protein	PFAM	PF02041	Auxin_BP	coord: 21..188 e-value: 8.2E-96 score: 318.4
IPR000526	Auxin-binding protein	PANTHER	PTHR37236	AUXIN-BINDING PROTEIN 1	coord: 8..189
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10	Jelly Rolls	coord: 25..189 e-value: 4.5E-64 score: 216.5
None	No IPR available	PANTHER	PTHR37236:SF1	AUXIN-BINDING PROTEIN 1	coord: 8..189
None	No IPR available	CDD	cd02220	cupin_ABP1	coord: 30..181 e-value: 2.90626E-113 score: 317.049
IPR011051	RmlC-like cupin domain superfamily	SUPERFAMILY	51182	RmlC-like cupins	coord: 30..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0028481.1	Cmc01g0028481.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0000911	cytokinesis by cell plate formation
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0045793	positive regulation of cell size
biological_process	GO:0032877	positive regulation of DNA endoreduplication
biological_process	GO:0009826	unidimensional cell growth
cellular_component	GO:0005788	endoplasmic reticulum lumen
cellular_component	GO:0016020	membrane
molecular_function	GO:0010011	auxin binding