Cmc01g0024891 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0024891
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr01: 25426117 .. 25427616 (+)
RNA-Seq ExpressionCmc01g0024891
SyntenyCmc01g0024891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTAAAAGAGTATGAACAAAAACAAAACAAATGACACGATCATTAGGACTAAATTAGACATTTACATATTTCACAACAGCCACACAAGCCAAAACCAGCTTAAAAGTACATTGTGTTTACCCTATGGCTCCACAATGATTTTGCCAGTGGCATGGCCGTCCATGCTTTTTGCCCAAGCATCTTCAGCTTTGCTAAGAGGATACCGTGAATCGATCACTGTCTTCAGCTTGCCTTCCTTGATCAGATTGATAAGATAGCTCAGATTCTCACTCTTGAAAGACATCAACAATGGCACCAGCTGCTTCTTGGAGAAGGTGAGTTTCTTGAAGGCAAAAGTCGCCAACGCAGCAGGAGTTGGAGTAATGTCTATGACCTTACCATTAGGACTTAAGTTTGGTTCAAATACAGACCATGGGATCCCTGAGGCACAATGAACCACTGCATCATACTTCTTACCTGATGGGCTCTTCAAGGCGGCCCCTTCGGGGGTTTTGTAATCAATAACCTCATCTGCACCTAAGCTCTTCACAAACTCGATATTACGGGCGCCACAAGTAGCCGTCACATGTGTGTTTCCTAACTTTGCTATCTGAACAGCATAATGACCAACACCACCAGAGGCAGCAGTGATGAGAATGTTCGATTGAGGGCCACTCCCATCAAGCTTGACACCGGCAACTTGGGTGAGAGCCTGGTGAGCTGTCAAAGCTGCGACAGGTAGGGCAGCGCCATCGGCCGCAGTCACTTCGGGGGGCCTGTAAACCGTTACCGACTCCTTTCCTACAGCATACTCAGCAAGTCCACCTCCTGTCTGTAATGTAAAAAATATATACTTCTGTAAGATGAAAACTTTCAATGAAGTGGATCACCAGAATAACATAGGATCCAAAAATCGGTTCAGGTTGAATCAACTAGTGGGGTTGTTCTGGCCAACTAGTTTCACAATTCAAGAGTGATGTTCATAACAGAACAGTATGGATACGCATATGACCTAACTTGATTAAATATAATGCAAAAATATAGTTCTTTAGAAAATGAAGCCACTCAAGGATTTTTATCATCAAAAATCATCAAAGATGCCTTAAAAGGAGGGGAATTTTTATCATCAAGAATCTCCAAGGTTGCCTTAAAAGTAGGATGACCAGCATAACACCATTGTTAACCTACGGATGCCTATAAAATTCGAAATTATGGAATTTTATTCTGGTTGCTGTTTTGAACTTGTTTTGAGACTTCCCAGGATCAGGTTTGAAGTACTATGTTATCATTTCTCCTTTTCATGTTGCTGTCTCTTCCGATCAACTTGTCTGTTTTTTCTCATCAATGTAATCTTTTAGATCATTTTGGAATAAGCAAGCTGATAGTTTTTCTTGGAGGGTAGTTTCAGTTTCGTAGATTAGTTCACCCACTAGCCATTATGTCATTTAGAATGTGTTCTAGATTTATAATTTTTCATTTCATCAACAAACATATCTTGTCACTTTTAGAAAAAAGCCTAA

mRNA sequence

CTTTAAAAGAGTATGAACAAAAACAAAACAAATGACACGATCATTAGGACTAAATTAGACATTTACATATTTCACAACAGCCACACAAGCCAAAACCAGCTTAAAAGTACATTGTGTTTACCCTATGGCTCCACAATGATTTTGCCAGTGGCATGGCCGTCCATGCTTTTTGCCCAAGCATCTTCAGCTTTGCTAAGAGGATACCGTGAATCGATCACTGTCTTCAGCTTGCCTTCCTTGATCAGATTGATAAGATAGCTCAGATTCTCACTCTTGAAAGACATCAACAATGGCACCAGCTGCTTCTTGGAGAAGGTGAGTTTCTTGAAGGCAAAAGTCGCCAACGCAGCAGGAGTTGGAGTAATGTCTATGACCTTACCATTAGGACTTAAGTTTGGTTCAAATACAGACCATGGGATCCCTGAGGCACAATGAACCACTGCATCATACTTCTTACCTGATGGGCTCTTCAAGGCGGCCCCTTCGGGGGTTTTGTAATCAATAACCTCATCTGCACCTAAGCTCTTCACAAACTCGATATTACGGGCGCCACAAGTAGCCGTCACATGTGTGTTTCCTAACTTTGCTATCTGAACAGCATAATGACCAACACCACCAGAGGCAGCAGTGATGAGAATGTTCGATTGAGGGCCACTCCCATCAAGCTTGACACCGGCAACTTGGGTGAGAGCCTGGTGAGCTGTCAAAGCTGCGACAGGTAGGGCAGCGCCATCGGCCGCAGTCACTTCGGGGGGCCTGTAAACCGTTACCGACTCCTTTCCTACAGCATACTCAGCAAGTCCACCTCCTGTCTGTAATGTAAAAAATATATACTTCTGTAAGATGAAAACTTTCAATGAAGTGGATCACCAGAATAACATAGGATCCAAAAATCGGTTCAGGTTGAATCAACTAGTGGGGTTGTTCTGGCCAACTAGTTTCACAATTCAAGAGTGATGTTCATAACAGAACAGTATGGATACGCATATGACCTAACTTGATTAAATATAATGCAAAAATATAGTTCTTTAGAAAATGAAGCCACTCAAGGATTTTTATCATCAAAAATCATCAAAGATGCCTTAAAAGGAGGGGAATTTTTATCATCAAGAATCTCCAAGGTTGCCTTAAAAGTAGGATGACCAGCATAACACCATTGTTAACCTACGGATGCCTATAAAATTCGAAATTATGGAATTTTATTCTGGTTGCTGTTTTGAACTTGTTTTGAGACTTCCCAGGATCAGGTTTGAAGTACTATGTTATCATTTCTCCTTTTCATGTTGCTGTCTCTTCCGATCAACTTGTCTGTTTTTTCTCATCAATGTAATCTTTTAGATCATTTTGGAATAAGCAAGCTGATAGTTTTTCTTGGAGGGTAGTTTCAGTTTCGTAGATTAGTTCACCCACTAGCCATTATGTCATTTAGAATGTGTTCTAGATTTATAATTTTTCATTTCATCAACAAACATATCTTGTCACTTTTAGAAAAAAGCCTAA

Coding sequence (CDS)

ATGAACAAAAACAAAACAAATGACACGATCATTAGGACTAAATTAGACATTTACATATTTCACAACAGCCACACAAGCCAAAACCAGCTTAAAAGTACATTGTGTTTACCCTATGGCTCCACAATGATTTTGCCAGTGGCATGGCCGTCCATGCTTTTTGCCCAAGCATCTTCAGCTTTGCTAAGAGGATACCGTGAATCGATCACTGTCTTCAGCTTGCCTTCCTTGATCAGATTGATAAGATAG

Protein sequence

MNKNKTNDTIIRTKLDIYIFHNSHTSQNQLKSTLCLPYGSTMILPVAWPSMLFAQASSALLRGYRESITVFSLPSLIRLIR
Homology
[Close]
BLAST of Cmc01g0024891 vs. ExPASy TrEMBL
Match: J3MYY2 (Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.5e-05
Identity = 28/35 (80.00%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 42 MILPVAWPSMLFAQASSALLRGYRESITVFSLPSL 77
          MILPVAWPSMLFAQAS ALLRGY ES+ V S P L
Sbjct: 1  MILPVAWPSMLFAQASCALLRGYVESMVVLSFPCL 35

The following BLAST results are available for this feature:
BLAST of Cmc01g0024891 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0024891 vs.
Match NameE-valueIdentityDescription
BLAST of Cmc01g0024891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
J3MYY29.5e-0580.00Uncharacterized protein OS=Oryza brachyantha OX=4533 PE=4 SV=1[more]
BLAST of Cmc01g0024891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0024891.1Cmc01g0024891.1mRNA