Cmc01g0015031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0015031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome b6
Location	CMiso1.1chr01: 12352148 .. 12352525 (-)
RNA-Seq Expression	Cmc01g0015031
Synteny	Cmc01g0015031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGAAAGCAAATTTTGGTTGGTTAATCCGATTAGTTCATAGATGGTTGGCAAGTATGATGGTCTTAATGATGATCTTGCATGTATTTTACGTGTTTCTTACCGTACATGGTGTAGTTCTAGCTGTATTAACCACATCCTTTGGTGTAACTGGTTATTCTTTACATTGGGATCAAATTGGTTATCAGGCAGTCAAAATTGTAACAGGTGTATCAGAAGTTATTCCAGTAATAGGGTCGCATGTGGTAGAGTTATTACGCATGAGTGCTAGTGTGGGACAATCTACCTTGTCTCGATTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGTCGTATTTATGTTAATGCACTTCCCGATATATGATACATAA

mRNA sequence

ATGACGAAAGCAAATTTTGGTTGGTTAATCCGATTAGTTCATAGATGGTTGGCAAGTATGATGGTCTTAATGATGATCTTGCATGTATTTTACGTGTTTCTTACCGTACATGGTGTAGTTCTAGCTGTATTAACCACATCCTTTGGTGTAACTGGTTATTCTTTACATTGGGATCAAATTGGTTATCAGGCAGTCAAAATTGTAACAGGTGTATCAGAAGTTATTCCAGTAATAGGGTCGCATGTGGTAGAGTTATTACGCATGAGTGCTAGTGTGGGACAATCTACCTTGTCTCGATTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGTCGTATTTATGTTAATGCACTTCCCGATATATGATACATAA

Coding sequence (CDS)

ATGACGAAAGCAAATTTTGGTTGGTTAATCCGATTAGTTCATAGATGGTTGGCAAGTATGATGGTCTTAATGATGATCTTGCATGTATTTTACGTGTTTCTTACCGTACATGGTGTAGTTCTAGCTGTATTAACCACATCCTTTGGTGTAACTGGTTATTCTTTACATTGGGATCAAATTGGTTATCAGGCAGTCAAAATTGTAACAGGTGTATCAGAAGTTATTCCAGTAATAGGGTCGCATGTGGTAGAGTTATTACGCATGAGTGCTAGTGTGGGACAATCTACCTTGTCTCGATTTTATAGTTTACACACTTTTGTATTACCTCTTCTTACTGTCGTATTTATGTTAATGCACTTCCCGATATATGATACATAA

Protein sequence

MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLTVHGVVLAVLTTSFGVTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLPLLTVVFMLMHFPIYDT

Homology

[Close]

BLAST of Cmc01g0015031 vs. NCBI nr
Match: QGA85418.1 (cytochrome b6, partial [Diptychandra aurantiaca])

HSP 1 Score: 186.0 bits (471), Expect = 1.9e-43
Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLTTSFG
Sbjct: 71  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTTSFG 130

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 131 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSASVGQSTLTRFYSLHTFVLP 190

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 191 LLTAVFMLMHFPM 203

[Close]

BLAST of Cmc01g0015031 vs. NCBI nr
Match: QWW33611.1 (cytochrome b6 [Piptanthus concolor])

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 71  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 130

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 131 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 190

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 191 LLTAVFMLMHFPM 203

[Close]

BLAST of Cmc01g0015031 vs. NCBI nr
Match: KAF1876848.1 (hypothetical protein Lal_00033139 [Lupinus albus])

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 106 MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 165

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 166 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 225

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 226 LLTAVFMLMHFPM 238

[Close]

BLAST of Cmc01g0015031 vs. NCBI nr
Match: YP_009368398.1 (cytochrome b6 [Ammopiptanthus mongolicus] >YP_009368483.1 cytochrome b6 [Ammopiptanthus nanus] >YP_009967722.1 cytochrome b6 [Piptanthus concolor] >YP_010118740.1 cytochrome b6 [Piptanthus nepalensis] >KAE9587491.1 Cytochrome b6 [Lupinus albus] >QKQ12880.1 PetB [Sophora flavescens] >ARK36903.1 cytochrome b6 [Ammopiptanthus mongolicus] >ARK36988.1 cytochrome b6 [Ammopiptanthus nanus] >QMX76712.1 cytochrome b6 [Piptanthus concolor])

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 20  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 79

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 80  VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 139

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 140 LLTAVFMLMHFPM 152

[Close]

BLAST of Cmc01g0015031 vs. NCBI nr
Match: RYR39653.1 (hypothetical protein Ahy_A09g045229 isoform A [Arachis hypogaea])

HSP 1 Score: 185.3 bits (469), Expect = 3.3e-43
Identity = 105/133 (78.95%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR +HRW ASMMVLMMILHVF+V+LT           V GVVLAVLT SFG
Sbjct: 20  MTEANFGWLIRSIHRWSASMMVLMMILHVFHVYLTGGFKKTREFTWVTGVVLAVLTASFG 79

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IP IGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 80  VTGYSLPWDQIGYWAVKIVTGVPEAIPGIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 139

Query: 121 LLTVVFMLMHFPI 123
           LLTVVFMLMHFP+
Sbjct: 140 LLTVVFMLMHFPM 152

[Close]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot
Match: Q7YJU8 (Cytochrome b6 OS=Calycanthus floridus var. glaucus OX=212734 GN=petB PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 105/133 (78.95%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot
Match: Q6L372 (Cytochrome b6 OS=Saccharum hybrid OX=15819 GN=petB PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 105/133 (78.95%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot
Match: Q6ENT4 (Cytochrome b6 OS=Saccharum officinarum OX=4547 GN=petB PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 105/133 (78.95%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot
Match: A1E9V4 (Cytochrome b6 OS=Sorghum bicolor OX=4558 GN=petB PE=3 SV=2)

HSP 1 Score: 183.7 bits (465), Expect = 1.3e-45
Identity = 105/133 (78.95%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot
Match: Q3BAK7 (Cytochrome b6 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 GN=petB PE=3 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-45
Identity = 104/133 (78.20%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IP+IGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPIIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL
Match: A0A5Q0UV74 (Cytochrome b6 (Fragment) OS=Diptychandra aurantiaca OX=149693 GN=petB PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.3e-44
Identity = 106/133 (79.70%), Postives = 111/133 (83.46%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLTTSFG
Sbjct: 71  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTTSFG 130

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 131 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSASVGQSTLTRFYSLHTFVLP 190

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 191 LLTAVFMLMHFPM 203

[Close]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL
Match: A0A1W6F858 (Cytochrome b6 OS=Ammopiptanthus nanus OX=111851 GN=petB PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 20  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 79

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 80  VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 139

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 140 LLTAVFMLMHFPM 152

[Close]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL
Match: A0A6H0ECB3 (Cytochrome b6 OS=Senna bicapsularis OX=346951 GN=petB PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL
Match: A0A1C7D3A7 (Cytochrome b6 OS=Lupinus albus OX=3870 GN=petB PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL
Match: A0A6M4EHG5 (Cytochrome b6 OS=Sesbania cannabina OX=206307 GN=petB PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 106/133 (79.70%), Postives = 110/133 (82.71%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVLAVLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV E IPVIGS VVELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSVVELLRGSASVGQSTLTRFYSLHTFVLP 192

Query: 121 LLTVVFMLMHFPI 123
           LLT VFMLMHFP+
Sbjct: 193 LLTAVFMLMHFPM 205

[Close]

BLAST of Cmc01g0015031 vs. TAIR 10
Match: ATCG00720.1 (photosynthetic electron transfer B )

HSP 1 Score: 178.3 bits (451), Expect = 3.8e-45
Identity = 102/131 (77.86%), Postives = 107/131 (81.68%), Query Frame = 0


Query: 1   MTKANFGWLIRLVHRWLASMMVLMMILHVFYVFLT-----------VHGVVLAVLTTSFG 60
           MT+ANFGWLIR VHRW ASMMVLMMILHVF V+LT           V GVVL VLT SFG
Sbjct: 73  MTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLGVLTASFG 132

Query: 61  VTGYSLHWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLP 120
           VTGYSL WDQIGY AVKIVTGV + IPVIGS +VELLR SASVGQSTL+RFYSLHTFVLP
Sbjct: 133 VTGYSLPWDQIGYWAVKIVTGVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLP 192

[Close]

BLAST of Cmc01g0015031 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 7   GWLIRLVHRWLASMMVLMMILHVF-----------YVFLTVHGVVLAVLTTSFGVTGYSL 66
           GWL+R +H   ASM ++++ LH+F             F+   GVV+ +L       GY L
Sbjct: 81  GWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVL 140

Query: 67  HWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLPLLTVVF 120
            W Q+ +    ++T ++  IPV+G  +V  L    SV  +TL+RF+SLH  +LP + V  
Sbjct: 141 PWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGA 200

[Close]

BLAST of Cmc01g0015031 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 58.9 bits (141), Expect = 3.3e-09
Identity = 42/124 (33.87%), Postives = 66/124 (53.23%), Query Frame = 0


Query: 7   GWLIRLVHRWLASMMVLMMILHVF-----------YVFLTVHGVVLAVLTTSFGVTGYSL 66
           GWL+R +H   ASM ++++ LH+F             F+   GVV+ +L       GY L
Sbjct: 81  GWLLRYMHANGASMFLIVVYLHIFRGLYHASYSSPREFVWCLGVVIFLLMIVTAFIGYVL 140

Query: 67  HWDQIGYQAVKIVTGVSEVIPVIGSHVVELLRMSASVGQSTLSRFYSLHTFVLPLLTVVF 120
            W Q+ +    ++T ++  IPV+G  +V  L    SV  +TL+RF+SLH  +LP + V  
Sbjct: 141 PWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLH-HLLPFILVGA 200

The following BLAST results are available for this feature:

BLAST of Cmc01g0015031 vs. NCBI nr


Match Name	E-value	Identity	Description
QGA85418.1	1.9e-43	79.70	cytochrome b6, partial [Diptychandra aurantiaca]	[more]
QWW33611.1	3.3e-43	79.70	cytochrome b6 [Piptanthus concolor]	[more]
KAF1876848.1	3.3e-43	79.70	hypothetical protein Lal_00033139 [Lupinus albus]	[more]
YP_009368398.1	3.3e-43	79.70	cytochrome b6 [Ammopiptanthus mongolicus] >YP_009368483.1 cytochrome b6 [Ammopip...	[more]
RYR39653.1	3.3e-43	78.95	hypothetical protein Ahy_A09g045229 isoform A [Arachis hypogaea]	[more]

BLAST of Cmc01g0015031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7YJU8	1.3e-45	78.95	Cytochrome b6 OS=Calycanthus floridus var. glaucus OX=212734 GN=petB PE=3 SV=1	[more]
Q6L372	1.3e-45	78.95	Cytochrome b6 OS=Saccharum hybrid OX=15819 GN=petB PE=3 SV=2	[more]
Q6ENT4	1.3e-45	78.95	Cytochrome b6 OS=Saccharum officinarum OX=4547 GN=petB PE=3 SV=1	[more]
A1E9V4	1.3e-45	78.95	Cytochrome b6 OS=Sorghum bicolor OX=4558 GN=petB PE=3 SV=2	[more]
Q3BAK7	1.6e-45	78.20	Cytochrome b6 OS=Phalaenopsis aphrodite subsp. formosana OX=308872 GN=petB PE=3 ...	[more]

BLAST of Cmc01g0015031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5Q0UV74	9.3e-44	79.70	Cytochrome b6 (Fragment) OS=Diptychandra aurantiaca OX=149693 GN=petB PE=3 SV=1	[more]
A0A1W6F858	1.6e-43	79.70	Cytochrome b6 OS=Ammopiptanthus nanus OX=111851 GN=petB PE=3 SV=1	[more]
A0A6H0ECB3	1.6e-43	79.70	Cytochrome b6 OS=Senna bicapsularis OX=346951 GN=petB PE=3 SV=1	[more]
A0A1C7D3A7	1.6e-43	79.70	Cytochrome b6 OS=Lupinus albus OX=3870 GN=petB PE=3 SV=1	[more]
A0A6M4EHG5	1.6e-43	79.70	Cytochrome b6 OS=Sesbania cannabina OX=206307 GN=petB PE=3 SV=1	[more]

BLAST of Cmc01g0015031 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00720.1	3.8e-45	77.86	photosynthetic electron transfer B	[more]
AT2G07727.1	3.3e-09	33.87	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	3.3e-09	33.87	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005797	Cytochrome b/b6, N-terminal	PFAM	PF00033	Cytochrome_B	coord: 1..120 e-value: 2.0E-38 score: 132.1
IPR005797	Cytochrome b/b6, N-terminal	PROSITE	PS51002	CYTB_NTER	coord: 1..125 score: 17.279896
IPR027387	Cytochrome b/b6-like domain superfamily	GENE3D	1.20.810.10	Cytochrome Bc1 Complex; Chain C	coord: 1..124 e-value: 3.1E-35 score: 123.3
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..122
IPR023530	Cytochrome b6, PetB	PANTHER	PTHR19271:SF20	SUBFAMILY NOT NAMED	coord: 1..122
IPR016174	Di-haem cytochrome, transmembrane	SUPERFAMILY	81342	Transmembrane di-heme cytochromes	coord: 2..121

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0015031.1	Cmc01g0015031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0022904	respiratory electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity