Cmc01g0014951 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0014951
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr01: 12173424 .. 12174232 (+)
RNA-Seq Expression	Cmc01g0014951
Synteny	Cmc01g0014951

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGTAATGAATTTGAAATCAAGAATTTGGGAGATCTGAAATATTTCCTTGGAATGGAGGTGACCATATCTAAAGAAGGCATCTCCGTGTCTCAGAAAAAATACACCCTTGATCAGCTAACCGAGATAGGTGTGTTGGGATGTCGTCCCACTAACACTCCTATTGAATTTAACTGTAAACTAGGAAACTCCGATGATCAAGTTCCAGTCGATAAAGAACAATATCAATGCCTTGTGGGTAAATTGATTTATTTATCTCATACTCGTCCTGATATTTCCTTTGTTGTGAGTGTTGTCAACCAGCTTATGCAGCCTCCCTAGAAGGAACACATGGAAACTGTCAAAAGAATTCTGAAATACTTAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGATTGACAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTGTTAACAGAAAGTCTACCTCCGGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTAGCCAGGAGCAGTGCTGAAGCCGAATATAGAGCTATGAGTTTAGGAATATGTGAGGAAATTTGGCTCCTGAAAGTCCTGTATGATCTTCATCAAGAATGTGAGATTCCATTGAAGCTCTTTTGTGATAATAAAGCTGCTATTAGTATTGCTAAGAACCCAGTTCAGCATGATAGAATTAAACATGTTGAGATTGATCGACATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCCATTCCATACATCCCTTCGAGCCGATAAGTTGCTGA

mRNA sequence

ATGTGTAATGAATTTGAAATCAAGAATTTGGGAGATCTGAAATATTTCCTTGGAATGGAGGTGACCATATCTAAAGAAGGCATCTCCGTGTCTCAGAAAAAATACACCCTTGATCAGCTAACCGAGATAGGTGTGTTGGGATGTCGTCCCACTAACACTCCTATTGAATTTAACTGTAAACTAGGAAACTCCGATGATCAAGTTCCAGTCGATAAAGAACAATATCAATGCCTTGTGGCTTATGCAGCCTCCCTAGAAGGAACACATGGAAACTGTCAAAAGAATTCTGAAATACTTAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGATTGACAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTGTTAACAGAAAGTCTACCTCCGGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTAGCCAGGAGCAGTGCTGAAGCCGAATATAGAGCTATGAGTTTAGGAATATGTGAGGAAATTTGGCTCCTGAAAGTCCTGTATGATCTTCATCAAGAATGTGAGATTCCATTGAAGCTCTTTTGTGATAATAAAGCTGCTATTAGTATTGCTAAGAACCCAGTTCAGCATGATAGAATTAAACATGTTGAGATTGATCGACATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCCATTCCATACATCCCTTCGAGCCGATAAGTTGCTGA

Coding sequence (CDS)

ATGTGTAATGAATTTGAAATCAAGAATTTGGGAGATCTGAAATATTTCCTTGGAATGGAGGTGACCATATCTAAAGAAGGCATCTCCGTGTCTCAGAAAAAATACACCCTTGATCAGCTAACCGAGATAGGTGTGTTGGGATGTCGTCCCACTAACACTCCTATTGAATTTAACTGTAAACTAGGAAACTCCGATGATCAAGTTCCAGTCGATAAAGAACAATATCAATGCCTTGTGGCTTATGCAGCCTCCCTAGAAGGAACACATGGAAACTGTCAAAAGAATTCTGAAATACTTAAAACGACACCTGGTAAAGGGTTGATGTTTAGAAAGATTGACAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAAGATCTGTTGTTAACAGAAAGTCTACCTCCGGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTAGCCAGGAGCAGTGCTGAAGCCGAATATAGAGCTATGAGTTTAGGAATATGTGAGGAAATTTGGCTCCTGAAAGTCCTGTATGATCTTCATCAAGAATGTGAGATTCCATTGAAGCTCTTTTGTGATAATAAAGCTGCTATTAGTATTGCTAAGAACCCAGTTCAGCATGATAGAATTAAACATGTTGAGATTGATCGACATTTCATCAAAGAAAAACTTGACAGTAGGAGCATATGCCATTCCATACATCCCTTCGAGCCGATAAGTTGCTGA

Protein sequence

MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCKLGNSDDQVPVDKEQYQCLVAYAASLEGTHGNCQKNSEILKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKHVEIDRHFIKEKLDSRSICHSIHPFEPISC

Homology

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BLAST of Cmc01g0014951 vs. NCBI nr
Match: KAA0057585.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 384.8 bits (987), Expect = 5.6e-103
Identity = 196/258 (75.97%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           M NEFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE  +LGCRP +TPIEFNCK
Sbjct: 722 MGNEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETSMLGCRPADTPIEFNCK 781

Query: 61  LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
           LGNSDDQVPVDKEQYQCLV     L  T  +                +K+ E        
Sbjct: 782 LGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFVVSVVSQFMQVSYEKHMEAVNRILRY 841

Query: 121 LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
           LK TPGKGLMFRK +RKTIEAYTDSDWARSV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 842 LKNTPGKGLMFRKTNRKTIEAYTDSDWARSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 901

Query: 181 RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            SSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 902 SSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 961

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BLAST of Cmc01g0014951 vs. NCBI nr
Match: XP_031740860.1 (uncharacterized protein LOC116403658 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 2.1e-102
Identity = 198/258 (76.74%), Postives = 207/258 (80.23%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KY LD LTE G+LGCRPT+TPIEFNCK
Sbjct: 21  MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYILDLLTETGMLGCRPTDTPIEFNCK 80

Query: 61  LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNCQ------------KNSE----------I 120
           LGNSDDQVPVDKEQYQ LV     L  T  +               N E           
Sbjct: 81  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQTPNEEHMKAVNRILRY 140

Query: 121 LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
           LK+TPGKGLMFRK DRKTIEAYTDSDWA SVV+RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 141 LKSTPGKGLMFRKTDRKTIEAYTDSDWAGSVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 200

Query: 181 RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
           RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 201 RSSAEAEYRAMSLGICEEIWLQKVLTDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 260

[Close]

BLAST of Cmc01g0014951 vs. NCBI nr
Match: XP_031741968.1 (uncharacterized protein LOC116403980 [Cucumis sativus])

HSP 1 Score: 382.9 bits (982), Expect = 2.1e-102
Identity = 198/258 (76.74%), Postives = 207/258 (80.23%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KY LD LTE G+LGCRPT+TPIEFNCK
Sbjct: 91  MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYILDLLTETGMLGCRPTDTPIEFNCK 150

Query: 61  LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNCQ------------KNSE----------I 120
           LGNSDDQVPVDKEQYQ LV     L  T  +               N E           
Sbjct: 151 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQTPNEEHMKAVNRILRY 210

Query: 121 LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
           LK+TPGKGLMFRK DRKTIEAYTDSDWA SVV+RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 211 LKSTPGKGLMFRKTDRKTIEAYTDSDWAGSVVDRKSTSGYCTFVWGNLVTWRSKKQSVVA 270

Query: 181 RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
           RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 271 RSSAEAEYRAMSLGICEEIWLQKVLTDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 330

[Close]

BLAST of Cmc01g0014951 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 380.2 bits (975), Expect = 1.4e-101
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 3.1e-32
Identity = 83/258 (32.17%), Postives = 133/258 (51.55%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            +   F +K   DL YFLG+E     +G+ +SQ++YTLD L    +L  +P  TP+  + K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   LG-NSDDQVPVDKEQYQCLVAYAASLEGT---------------------HGNCQKN-SE 120
            L  +S  ++P D  +Y+ +V     L  T                     H N  K    
Sbjct: 1214 LTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1273

Query: 121  ILKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVV 180
             L  TP  G+  +K +  ++ AY+D+DWA    +  ST+GY  ++  + ++W SKKQ  V
Sbjct: 1274 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGV 1333

Query: 181  ARSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIK 236
             RSS EAEYR+++    E  W+  +L +L  +   P  ++CDN  A  +  NPV H R+K
Sbjct: 1334 VRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMK 1393

[Close]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 135.6 bits (340), Expect = 7.8e-31
Identity = 86/270 (31.85%), Postives = 145/270 (53.70%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPI--EFN 60
            +  +F + +L ++K+F+G+ + + ++ I +SQ  Y    L++  +  C   +TP+  + N
Sbjct: 1108 LMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKIN 1167

Query: 61   CKLGNSDDQVPVD-KEQYQCL----------VAYAASLEGTHGNCQKNSEI--------- 120
             +L NSD+      +    CL          +  A ++   + + + NSE+         
Sbjct: 1168 YELLNSDEDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSS-KNNSELWQNLKRVLR 1227

Query: 121  -LKTTPGKGLMFRK---IDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWG-NLVTWRSKK 180
             LK T    L+F+K    + K I  Y DSDWA S ++RKST+GY   ++  NL+ W +K+
Sbjct: 1228 YLKGTIDMKLIFKKNLAFENKII-GYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKR 1287

Query: 181  QSVVARSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQH 240
            Q+ VA SS EAEY A+   + E +WL  +L  ++ + E P+K++ DN+  ISIA NP  H
Sbjct: 1288 QNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCH 1347

Query: 241  DRIKHVEIDRHFIKEKLDSRSICHSIHPFE 244
             R KH++I  HF +E++ +  IC    P E
Sbjct: 1348 KRAKHIDIKYHFAREQVQNNVICLEYIPTE 1375

[Close]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-30
Identity = 78/257 (30.35%), Postives = 129/257 (50.19%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            +   F +K+  +L YFLG+E      G+ +SQ++Y LD L    ++  +P  TP+  + K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGT---------------HGNCQKNSEILKT---- 120
            L         D  +Y+ +V     L  T               H   +++ + LK     
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 121  ---TPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
               TP  G+  +K +  ++ AY+D+DWA    +  ST+GY  ++  + ++W SKKQ  V 
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVV 1350

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 236
            RSS EAEYR+++    E  W+  +L +L      P  ++CDN  A  +  NPV H R+KH
Sbjct: 1351 RSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKH 1410

[Close]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.4e-24
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           + + F +K+LG + YFLG+++     G+ +SQ KY    L   G+L C+P +TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVP--------VDKEQYQCL----VAYAASL------EGTHGNCQKNSEILKTT 120
              S  + P        V   QY  L    ++YA ++      E T  +      +L+  
Sbjct: 87  SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYV 146

Query: 121 PG---KGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVAR 179
            G    GL   K  +  ++A+ DSDWA     R+ST+G+CTF+  N+++W +K+Q  V+R
Sbjct: 147 KGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSR 206

[Close]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.3e-22
Identity = 75/268 (27.99%), Postives = 130/268 (48.51%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEG--ISVSQKKYTLDQLTEIGVLGCRPTNTPIEFN 60
            +   F++K+LG  +  LGM++   +    + +SQ+KY    L    +   +P +TP+  +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   CKLGNSDDQVPVDKEQYQCLVAYAASL-----------------EGTHGNCQKNS----- 120
             KL        V+++     V Y++++                  G      +N      
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1148

Query: 121  -------EILKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTW 180
                     L+ T G  L F   D   ++ YTD+D A  + NRKS++GY     G  ++W
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISW 1208

Query: 181  RSKKQSVVARSSAEAEYRAMSLGICEEIWLLKVLYD--LHQECEIPLKLFCDNKAAISIA 236
            +SK Q  VA S+ EAEY A +    E IWL + L +  LHQ+  +   ++CD+++AI ++
Sbjct: 1209 QSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYV---VYCDSQSAIDLS 1268

[Close]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL
Match: A0A5A7UVJ5 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00580 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.7e-103
Identity = 196/258 (75.97%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           M NEFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE  +LGCRP +TPIEFNCK
Sbjct: 722 MGNEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETSMLGCRPADTPIEFNCK 781

Query: 61  LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
           LGNSDDQVPVDKEQYQCLV     L  T  +                +K+ E        
Sbjct: 782 LGNSDDQVPVDKEQYQCLVGKLIYLSHTRPDISFVVSVVSQFMQVSYEKHMEAVNRILRY 841

Query: 121 LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
           LK TPGKGLMFRK +RKTIEAYTDSDWARSV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 842 LKNTPGKGLMFRKTNRKTIEAYTDSDWARSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 901

Query: 181 RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            SSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 902 SSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 961

[Close]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.7e-102
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.7e-102
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.7e-102
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 6.7e-102
Identity = 195/258 (75.58%), Postives = 208/258 (80.62%), Query Frame = 0


Query: 1    MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
            M +EFEIK+LG+LKYFLGMEV  SKEGISVSQ+KYTLD LTE G+LGCRP +TPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQCLVAYAASLEGTHGNC---------------QKNSE-------I 120
            LGNSDDQVPVDKEQYQ LV     L  T  +                +K+ E        
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKTTPGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVA 180
            LK TPGKGLMFRK +RKTIEAYTDSDWA SV++RKSTSGYCTFVWGNLVTWRSKKQSVVA
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFVWGNLVTWRSKKQSVVA 1488

Query: 181  RSSAEAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKH 237
            RSSAEAEYRAMSLGICEEIWL KVL DLHQECE PLKLFCDNKAAISIA NPVQHDR KH
Sbjct: 1489 RSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKH 1548

[Close]

BLAST of Cmc01g0014951 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 166.4 bits (420), Expect = 2.9e-41
Identity = 89/247 (36.03%), Postives = 137/247 (55.47%), Query Frame = 0


Query: 5   FEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCKLGNS 64
           F++++LG LKYFLG+E+  S  GI++ Q+KY LD L E G+LGC+P++ P++ +      
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 65  DDQVPVDKEQYQCLVAYAASLEGTHGN----------------------CQKNSEILKTT 124
                VD + Y+ L+     L+ T  +                        K    +K T
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427

Query: 125 PGKGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVARSSA 184
            G+GL +       ++ ++D+ +      R+ST+GYC F+  +L++W+SKKQ VV++SSA
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSA 487

Query: 185 EAEYRAMSLGICEEIWLLKVLYDLHQECEIPLKLFCDNKAAISIAKNPVQHDRIKHVEID 230
           EAEYRA+S    E +WL +   +L      P  LFCDN AAI IA N V H+R KH+E D
Sbjct: 488 EAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESD 547

[Close]

BLAST of Cmc01g0014951 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 3.8e-25
Identity = 64/199 (32.16%), Postives = 102/199 (51.26%), Query Frame = 0


Query: 1   MCNEFEIKNLGDLKYFLGMEVTISKEGISVSQKKYTLDQLTEIGVLGCRPTNTPIEFNCK 60
           + + F +K+LG + YFLG+++     G+ +SQ KY    L   G+L C+P +TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVP--------VDKEQYQCL----VAYAASL------EGTHGNCQKNSEILKTT 120
              S  + P        V   QY  L    ++YA ++      E T  +      +L+  
Sbjct: 87  SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYV 146

Query: 121 PG---KGLMFRKIDRKTIEAYTDSDWARSVVNRKSTSGYCTFVWGNLVTWRSKKQSVVAR 179
            G    GL   K  +  ++A+ DSDWA     R+ST+G+CTF+  N+++W +K+Q  V+R
Sbjct: 147 KGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSR 206

The following BLAST results are available for this feature:

BLAST of Cmc01g0014951 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0057585.1	5.6e-103	75.97	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
XP_031740860.1	2.1e-102	76.74	uncharacterized protein LOC116403658 [Cucumis sativus]	[more]
XP_031741968.1	2.1e-102	76.74	uncharacterized protein LOC116403980 [Cucumis sativus]	[more]
TYJ99952.1	1.4e-101	75.58	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
TYK08054.1	1.4e-101	75.58	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0014951 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	3.1e-32	32.17	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	7.8e-31	31.85	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	1.0e-30	30.35	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P92519	5.4e-24	32.16	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	1.3e-22	27.99	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc01g0014951 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVJ5	2.7e-103	75.97	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G0...	[more]
A0A5D3BJK7	6.7e-102	75.58	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	6.7e-102	75.58	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	6.7e-102	75.58	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	6.7e-102	75.58	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]

BLAST of Cmc01g0014951 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.9e-41	36.03	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	3.8e-25	32.16	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF273	RIBOSOME BIOGENESIS PROTEIN BOP1 HOMOLOG	coord: 138..232
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 138..232
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 118..236 e-value: 1.40532E-62 score: 190.757
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 8..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0014951.1	Cmc01g0014951.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding