Cmc01g0014521 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0014521
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr01: 11522362 .. 11522844 (-)
RNA-Seq Expression	Cmc01g0014521
Synteny	Cmc01g0014521

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTGTTCATTGATGATTTCTCTCGATTTACATGGATTTATTTTTTTTAAACATCTTTCTGAATTATCTCGCACTTATATTGTGTTTGTTAACATGATTCACACTCAATTCTCTTGTCCTATCAAAATCCTCTGCCTTGATAATGCCTTGGAGTATATAGACTCTACTCTTTTTTCTTTTTTGTCCCAACAAGGTACTCTTGTTCAACGCTCTTGCACCCACACCTCTCAACAAAATGAGTGTGCTGAGCGCAAGCATCACCACATTCTTAACTCAGTACGTGCCCTCTTTCTTTTCGCCTCATGTCTTGAGAAATTTAAGGGTGAAGCAGCTCTTACATCCGTCTACACCATCAATAGTCTTCCTTCTTCTGTTCTTCAGAACATCTATCGATACAAAAGACTATTTGGTACTCCTCCTAACTACTTTAACCTTAAAGTTCTTGGTTGTGTCTGCTTTGTTCTTTTGCATCCTCATTAA

mRNA sequence

ATGTTCTGTTCATTGATGATTTCTCTCGATTTACATGGATTTATTTTTTTTAAACATCTTTCTGAATTATCTCGCACTTATATTGTGTTTGTTAACATGATTCACACTCAATTCTCTTGTCCTATCAAAATCCTCTGCCTTGATAATGCCTTGGAGTATATAGACTCTACTCTTTTTTCTTTTTTGTCCCAACAAGGTACTCTTGTTCAACGCTCTTGCACCCACACCTCTCAACAAAATGAGTGTGCTGAGCGCAAGCATCACCACATTCTTAACTCAGTACGTGCCCTCTTTCTTTTCGCCTCATGTCTTGAGAAATTTAAGGGTGAAGCAGCTCTTACATCCGTCTACACCATCAATAGTCTTCCTTCTTCTGTTCTTCAGAACATCTATCGATACAAAAGACTATTTGGTACTCCTCCTAACTACTTTAACCTTAAAGTTCTTGGTTGTGTCTGCTTTGTTCTTTTGCATCCTCATTAA

Coding sequence (CDS)

ATGTTCTGTTCATTGATGATTTCTCTCGATTTACATGGATTTATTTTTTTTAAACATCTTTCTGAATTATCTCGCACTTATATTGTGTTTGTTAACATGATTCACACTCAATTCTCTTGTCCTATCAAAATCCTCTGCCTTGATAATGCCTTGGAGTATATAGACTCTACTCTTTTTTCTTTTTTGTCCCAACAAGGTACTCTTGTTCAACGCTCTTGCACCCACACCTCTCAACAAAATGAGTGTGCTGAGCGCAAGCATCACCACATTCTTAACTCAGTACGTGCCCTCTTTCTTTTCGCCTCATGTCTTGAGAAATTTAAGGGTGAAGCAGCTCTTACATCCGTCTACACCATCAATAGTCTTCCTTCTTCTGTTCTTCAGAACATCTATCGATACAAAAGACTATTTGGTACTCCTCCTAACTACTTTAACCTTAAAGTTCTTGGTTGTGTCTGCTTTGTTCTTTTGCATCCTCATTAA

Protein sequence

MFCSLMISLDLHGFIFFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTHTSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKRLFGTPPNYFNLKVLGCVCFVLLHPH

Homology

[Close]

BLAST of Cmc01g0014521 vs. NCBI nr
Match: TYK15021.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 228.0 bits (580), Expect = 5.7e-56
Identity = 116/145 (80.00%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  +++
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEK 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLLHPH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLHPH 687

[Close]

BLAST of Cmc01g0014521 vs. NCBI nr
Match: TYK03707.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-56
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 214 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 273

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRA  L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 274 TSQQNGRAERKHRHILDSVRAFLLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFER 333

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLLHPH
Sbjct: 334 LYGTPPNYSNLKVFGCACFVLLHPH 358

[Close]

BLAST of Cmc01g0014521 vs. NCBI nr
Match: TYK19656.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

[Close]

BLAST of Cmc01g0014521 vs. NCBI nr
Match: KAA0037745.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

[Close]

BLAST of Cmc01g0014521 vs. NCBI nr
Match: TYK26360.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

[Close]

BLAST of Cmc01g0014521 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.9e-18
Identity = 53/143 (37.06%), Postives = 77/143 (53.85%), Query Frame = 0


Query: 18  KHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTHTS 77
           K  S++  T+I+F +++  +F   I  L  DN  E++   L  +LSQ G     S  HT 
Sbjct: 541 KQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFV--VLRDYLSQHGISHFTSPPHTP 600

Query: 78  QQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKRLF 137
           + N  +ERKH HI+     L   AS  + +   A   +VY IN LP+ +LQ    +++LF
Sbjct: 601 EHNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLF 660

Query: 138 GTPPNYFNLKVLGCVCFVLLHPH 161
           G PPNY  LKV GC C+  L P+
Sbjct: 661 GQPPNYEKLKVFGCACYPWLRPY 681

[Close]

BLAST of Cmc01g0014521 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.3e-18
Identity = 51/143 (35.66%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 18  KHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTHTS 77
           K  S++  T+I F N++  +F   I     DN  E++   L+ + SQ G     S  HT 
Sbjct: 562 KQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFV--ALWEYFSQHGISHLTSPPHTP 621

Query: 78  QQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKRLF 137
           + N  +ERKH HI+ +   L   AS  + +   A   +VY IN LP+ +LQ    +++LF
Sbjct: 622 EHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLF 681

Query: 138 GTPPNYFNLKVLGCVCFVLLHPH 161
           GT PNY  L+V GC C+  L P+
Sbjct: 682 GTSPNYDKLRVFGCACYPWLRPY 702

[Close]

BLAST of Cmc01g0014521 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 58.2 bits (139), Expect = 1.0e-07
Identity = 39/140 (27.86%), Postives = 63/140 (45.00%), Query Frame = 0


Query: 18  KHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTHTS 77
           K+ S++   +  FV      F+  +  L +DN  EY+ + +  F  ++G     +  HT 
Sbjct: 520 KYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTP 579

Query: 78  QQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYR--YKR 137
           Q N  +ER    I    R +   A   + F GEA LT+ Y IN +PS  L +  +  Y+ 
Sbjct: 580 QLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEM 639

Query: 138 LFGTPPNYFNLKVLGCVCFV 156
                P   +L+V G   +V
Sbjct: 640 WHNKKPYLKHLRVFGATVYV 659

[Close]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL
Match: A0A5D3CT53 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00560 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 2.7e-56
Identity = 116/145 (80.00%), Postives = 121/145 (83.45%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  +++
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFEK 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLLHPH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLHPH 687

[Close]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL
Match: A0A5D3BW28 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold863G00740 PE=4 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 3.6e-56
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 214 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 273

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRA  L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 274 TSQQNGRAERKHRHILDSVRAFLLSASCPEKFWGEAALTSVYTINHLPSSVLQNISPFER 333

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLLHPH
Sbjct: 334 LYGTPPNYSNLKVFGCACFVLLHPH 358

[Close]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

[Close]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

[Close]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL
Match: A0A5A7T8F2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold141G00410 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 1.0e-55
Identity = 116/145 (80.00%), Postives = 120/145 (82.76%), Query Frame = 0


Query: 16  FFKHLSELSRTYIVFVNMIHTQFSCPIKILCLDNALEYIDSTLFSFLSQQGTLVQRSCTH 75
           F KH SELSRTYI F NMI TQFSCPIK L  DNALEY DSTL SFLSQQGTLVQRSC H
Sbjct: 543 FLKHRSELSRTYIEFANMIRTQFSCPIKTLRTDNALEYKDSTLLSFLSQQGTLVQRSCPH 602

Query: 76  TSQQNECAERKHHHILNSVRALFLFASCLEKFKGEAALTSVYTINSLPSSVLQNIYRYKR 135
           TSQQN  AERKH HIL+SVRAL L ASC EKF GEAALTSVYTIN LPSSVLQNI  ++R
Sbjct: 603 TSQQNGRAERKHRHILDSVRALLLSASCPEKFWGEAALTSVYTINRLPSSVLQNISPFER 662

Query: 136 LFGTPPNYFNLKVLGCVCFVLLHPH 161
           L+GTPPNY NLKV GC CFVLL PH
Sbjct: 663 LYGTPPNYSNLKVFGCACFVLLQPH 687

The following BLAST results are available for this feature:

BLAST of Cmc01g0014521 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK15021.1	5.7e-56	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK03707.1	7.4e-56	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK19656.1	2.2e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
KAA0037745.1	2.2e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK26360.1	2.2e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc01g0014521 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZT94	4.9e-18	37.06	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	8.3e-18	35.66	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P04146	1.0e-07	27.86	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CT53	2.7e-56	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BW28	3.6e-56	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	1.0e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	1.0e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7T8F2	1.0e-55	80.00	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc01g0014521 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 8..140 e-value: 3.4E-13 score: 51.7
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 21..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0014521.1	Cmc01g0014521.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding