Cmc01g0013721 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0013721
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr01: 10388837 .. 10390807 (-)
RNA-Seq Expression	Cmc01g0013721
Synteny	Cmc01g0013721

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTACAATACCCGTGCTCGCACTACCCGATTGGTCTTTGCCTTTTATGATAGAGACTGATGCCTTAGGCAGTGGATTAGGAGCAGTACTGTCTCAGAACGGCCATCCCATCGCATTCTTCAGCCGGAAGTTGTCTCCAAGGGCCCAATCCAAATCCTTCTACGAAAGAGAATTGATGGCTGTAGTACTATCAGTACAGAAGTGGCGGCATTATCTCATAGGAAGAAGGTTTACCATTATATCGGACCAAAAAGCTCTAAAGTTCCTATTGGAGCAGAGGGAGGTTCAACCACAGTTCCAAAAATGGTTGACCAAGCTGTTGAGATATGACTTTGAGATTCTATATCAACCAGGACTCCAAAATAAAGCAGTTGATGCACTTTCAAGAGTCAATCACCAGTCGGAATTGAACGCAATGTCCACAGCAGGAATTGTAGATATGGAAACAGTTACAAAAAAAGTTGAGAAAGATGAAGAACTTCAACTCATAGCACAACAGCTTCAAACCGACCCTTCACTGGAGGGGAAATATTCCTTGTTGAATGGCAAGTTAATGTATAAAGGAAGGGTGGTATTTTCCAAATCATCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATCTTTGGAGGACATTCAGGTTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAATTATGTAGAACAGTGCGAAATCTGCCAACGGAATAAATATGAAGCAACCAAACCGGGCGAAGTTCTTCAACCACAACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATAGAAGGGCTGCCTAAAGCAGGGGGTATGAATGTGATCATGGTTGTGGTTGACCGGCTGAGCAAATACGCTTACTTTGTCACCATGAAACACCCTTTCTCAGCAAAGCAAGTAGCAACAGAATTCATCGATAAGATAGTCCGAATACATGGCATTCCTAAGTCAATCATATCGGATAGGGATAAAATCTTTCTTAGCAACTTTTGGAAGGAGCTATTGTATGCTATGGATACTATTCTTAAACGAAGCACCGCATTTCATCCACAAACGGACGGGCAGACAGAAAGGGTTAACCAGTGTTTAGAAACATACTTAAGATGTTTCTGTAACGAGCAGCCAAACAAATGGCATCAGTTCATACCATGGGCGGAGTTATGGTACAATACCACCTTCCATGCTTCAACACACACAACCCCCTTCCAAGCTGTGTATGGTAGACCTCCACCACCCTTAATATCCTATGGAGATAAGAAGACACCTAATGATGAGGTTGAAACATTGCTGAAAGAGAGGGACTTGGCCATTAGCGCGCTCAAGGAAAACCTTACTATAGCTCAAAACAGAATGAAGAAGTTTGCGGACTCAAAGAGGAGAGAACTTAAGTTTAAAGTGGGAGATGAAGTCTATCTCAAGTTGAGGTCTTACCGTCAACGCTCATTAGCAAAGAAAAGGGCCGAAAAATTAGCTCCTAAGTATTATGGCCCGTACCGCATCACTGAGACCATAGGGGAGGTGGTCTATCGACTTGATCTGCCCCCAGAAGCCTCAATTCACAATGTTTTCCATATCTCGCAACTCAAACTTAAACTGGACAAACAGCACACAGTTCAAACCCAACAGCCGAAGCTCACAGCCAAATTTGAGTTACAACTTTGGCCAGAAACAGTAATGGGCATCCGTTGGAGTCCAGAGTTGGGAGCAAATGAATGGCTGGTGAAGTGGAAAGGATTACCCGACAGTGAAGCCACCTGGGAATCCGTTTACTCAATGAACCAACAGTTTCTTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGAGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAAGGGCAAGAAAGGAATTACACAAAACAGCATGGAGGAAAGAAAGAATTGA

mRNA sequence

ATGACTACAATACCCGTGCTCGCACTACCCGATTGGTCTTTGCCTTTTATGATAGAGACTGATGCCTTAGGCAGTGGATTAGGAGCAGTACTGTCTCAGAACGGCCATCCCATCGCATTCTTCAGCCGGAAGTTGTCTCCAAGGGCCCAATCCAAATCCTTCTACGAAAGAGAATTGATGGCTGTAGTACTATCAGTACAGAAGTGGCGGCATTATCTCATAGGAAGAAGGTTTACCATTATATCGGACCAAAAAGCTCTAAAGTTCCTATTGGAGCAGAGGGAGGTTCAACCACAGTTCCAAAAATGGTTGACCAAGCTGTTGAGATATGACTTTGAGATTCTATATCAACCAGGACTCCAAAATAAAGCAGTTGATGCACTTTCAAGAGTCAATCACCAGTCGGAATTGAACGCAATGTCCACAGCAGGAATTGTAGATATGGAAACAGTTACAAAAAAAGTTGAGAAAGATGAAGAACTTCAACTCATAGCACAACAGCTTCAAACCGACCCTTCACTGGAGGGGAAATATTCCTTGTTGAATGGCAAGTTAATGTATAAAGGAAGGGTGGTATTTTCCAAATCATCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATCTTTGGAGGACATTCAGGTTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAATTATGTAGAACAGTGCGAAATCTGCCAACGGAATAAATATGAAGCAACCAAACCGGGCGAAGTTCTTCAACCACAACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATAGAAGGGCTGCCTAAAGCAGGGGGTATGAATGTGATCATGGTTGTGGTTGACCGGCTGAGCAAATACGCTTACTTTGTCACCATGAAACACCCTTTCTCAGCAAAGCAAGTAGCAACAGAATTCATCGATAAGATAGTCCGAATACATGGCATTCCTAAGTCAATCATATCGGATAGGGATAAAATCTTTCTTAGCAACTTTTGGAAGGAGCTATTGTATGCTATGGATACTATTCTTAAACGAAGCACCGCATTTCATCCACAAACGGACGGGCAGACAGAAAGGGTTAACCAGTGTTTAGAAACATACTTAAGATGTTTCTGTAACGAGCAGCCAAACAAATGGCATCAGTTCATACCATGGGCGGAGTTATGGTACAATACCACCTTCCATGCTTCAACACACACAACCCCCTTCCAAGCTGTGTATGGTAGACCTCCACCACCCTTAATATCCTATGGAGATAAGAAGACACCTAATGATGAGGTTGAAACATTGCTGAAAGAGAGGGACTTGGCCATTAGCGCGCTCAAGGAAAACCTTACTATAGCTCAAAACAGAATGAAGAAGTTTGCGGACTCAAAGAGGAGAGAACTTAAGTTTAAAGTGGGAGATGAAGTCTATCTCAAGTTGAGGTCTTACCGTCAACGCTCATTAGCAAAGAAAAGGGCCGAAAAATTAGCTCCTAAGTATTATGGCCCGTACCGCATCACTGAGACCATAGGGGAGGTGGTCTATCGACTTGATCTGCCCCCAGAAGCCTCAATTCACAATGTTTTCCATATCTCGCAACTCAAACTTAAACTGGACAAACAGCACACAGTTCAAACCCAACAGCCGAAGCTCACAGCCAAATTTGAGTTACAACTTTGGCCAGAAACAGTAATGGGCATCCGTTGGAGTCCAGAGTTGGGAGCAAATGAATGGCTGGTGAAGTGGAAAGGATTACCCGACAGTGAAGCCACCTGGGAATCCGTTTACTCAATGAACCAACAGTTTCTTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGAGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAAGGGCAAGAAAGGAATTACACAAAACAGCATGGAGGAAAGAAAGAATTGA

Coding sequence (CDS)

ATGACTACAATACCCGTGCTCGCACTACCCGATTGGTCTTTGCCTTTTATGATAGAGACTGATGCCTTAGGCAGTGGATTAGGAGCAGTACTGTCTCAGAACGGCCATCCCATCGCATTCTTCAGCCGGAAGTTGTCTCCAAGGGCCCAATCCAAATCCTTCTACGAAAGAGAATTGATGGCTGTAGTACTATCAGTACAGAAGTGGCGGCATTATCTCATAGGAAGAAGGTTTACCATTATATCGGACCAAAAAGCTCTAAAGTTCCTATTGGAGCAGAGGGAGGTTCAACCACAGTTCCAAAAATGGTTGACCAAGCTGTTGAGATATGACTTTGAGATTCTATATCAACCAGGACTCCAAAATAAAGCAGTTGATGCACTTTCAAGAGTCAATCACCAGTCGGAATTGAACGCAATGTCCACAGCAGGAATTGTAGATATGGAAACAGTTACAAAAAAAGTTGAGAAAGATGAAGAACTTCAACTCATAGCACAACAGCTTCAAACCGACCCTTCACTGGAGGGGAAATATTCCTTGTTGAATGGCAAGTTAATGTATAAAGGAAGGGTGGTATTTTCCAAATCATCTTCACTTATACCCAGCCTCTTACACACCTTTCACGACTCTATCTTTGGAGGACATTCAGGTTTTTTGAGGACCTACAAGCGGATGAGTGGTGAGCTGTTTTGGAAGGGTATGAAGACAGATATTAAGAATTATGTAGAACAGTGCGAAATCTGCCAACGGAATAAATATGAAGCAACCAAACCGGGCGAAGTTCTTCAACCACAACCCATACCCGACCGCATATTGGAAGATTGGACTATGGACTTCATAGAAGGGCTGCCTAAAGCAGGGGGTATGAATGTGATCATGGTTGTGGTTGACCGGCTGAGCAAATACGCTTACTTTGTCACCATGAAACACCCTTTCTCAGCAAAGCAAGTAGCAACAGAATTCATCGATAAGATAGTCCGAATACATGGCATTCCTAAGTCAATCATATCGGATAGGGATAAAATCTTTCTTAGCAACTTTTGGAAGGAGCTATTGTATGCTATGGATACTATTCTTAAACGAAGCACCGCATTTCATCCACAAACGGACGGGCAGACAGAAAGGGTTAACCAGTGTTTAGAAACATACTTAAGATGTTTCTGTAACGAGCAGCCAAACAAATGGCATCAGTTCATACCATGGGCGGAGTTATGGTACAATACCACCTTCCATGCTTCAACACACACAACCCCCTTCCAAGCTGTGTATGGTAGACCTCCACCACCCTTAATATCCTATGGAGATAAGAAGACACCTAATGATGAGGTTGAAACATTGCTGAAAGAGAGGGACTTGGCCATTAGCGCGCTCAAGGAAAACCTTACTATAGCTCAAAACAGAATGAAGAAGTTTGCGGACTCAAAGAGGAGAGAACTTAAGTTTAAAGTGGGAGATGAAGTCTATCTCAAGTTGAGGTCTTACCGTCAACGCTCATTAGCAAAGAAAAGGGCCGAAAAATTAGCTCCTAAGTATTATGGCCCGTACCGCATCACTGAGACCATAGGGGAGGTGGTCTATCGACTTGATCTGCCCCCAGAAGCCTCAATTCACAATGTTTTCCATATCTCGCAACTCAAACTTAAACTGGACAAACAGCACACAGTTCAAACCCAACAGCCGAAGCTCACAGCCAAATTTGAGTTACAACTTTGGCCAGAAACAGTAATGGGCATCCGTTGGAGTCCAGAGTTGGGAGCAAATGAATGGCTGGTGAAGTGGAAAGGATTACCCGACAGTGAAGCCACCTGGGAATCCGTTTACTCAATGAACCAACAGTTTCTTTCATTCCACCTTGAGGACAAGGTGATTTTGGAACCCCGAGGTATTGTAAGACCTCCTATTATTAATGTGTATAAGAGGAAGGGCAAGAAAGGAATTACACAAAACAGCATGGAGGAAAGAAAGAATTGA

Protein sequence

MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELMAVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGLQNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSLLNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQAVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELKFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVFHISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSEATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN

Homology

[Close]

BLAST of Cmc01g0013721 vs. NCBI nr
Match: KAA0048288.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 641/656 (97.71%), Postives = 646/656 (98.48%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTI VLALPDWSLPFMIETDA GSGLGAVLSQNGHPIAFFS+KLSPRAQSKSFYERELM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 182

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKA DALSRV+HQSELNAMSTAGIVDMETVTK+VEKDEELQLIAQQLQTDPSLEGKYSL
Sbjct: 183 QNKAADALSRVDHQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSL 242

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGR VFSKSSSLIPSLLHTFHDSIF GHSGFLRTYKRMSGELFWKGMKTDIKN
Sbjct: 243 LNGKLMYKGRAVFSKSSSLIPSLLHTFHDSIFRGHSGFLRTYKRMSGELFWKGMKTDIKN 302

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNKYE TKPGEVLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 303 YVEQCEICQRNKYETTKPGEVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 362

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVATEFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 363 KYAYFVTMKHPFSAKQVATEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 422

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFHPQTDGQTERVN+CLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ
Sbjct: 423 RSTAFHPQTDGQTERVNRCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 482

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 483 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 542

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLRSYRQRSLAKK+AEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF
Sbjct: 543 FKVGDEVYLKLRSYRQRSLAKKKAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 602

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE
Sbjct: 603 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 662

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN
Sbjct: 663 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 718

[Close]

BLAST of Cmc01g0013721 vs. NCBI nr
Match: TYK07972.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 640/656 (97.56%), Postives = 645/656 (98.32%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTI VLALPDWSLPFMIETDA GSGLGAVLSQNGHPIAFFS+KLSPRAQSKSFYERELM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 182

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKA DALSRV+HQSELNAMSTAGIVDMETVTK+VEKDEELQLIAQQLQTDPSLEGKYSL
Sbjct: 183 QNKAADALSRVDHQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSL 242

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGR VFSKSSSLIPSLLHTFHDSIF GHSGFLRTYKRMSGELFWKGMKTDIKN
Sbjct: 243 LNGKLMYKGRAVFSKSSSLIPSLLHTFHDSIFRGHSGFLRTYKRMSGELFWKGMKTDIKN 302

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNKYE TKPGEVLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 303 YVEQCEICQRNKYETTKPGEVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 362

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVATEFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 363 KYAYFVTMKHPFSAKQVATEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 422

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFHPQTDGQTERVN+CLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ
Sbjct: 423 RSTAFHPQTDGQTERVNRCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 482

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVY RPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 483 AVYVRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 542

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLRSYRQRSLAKK+AEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF
Sbjct: 543 FKVGDEVYLKLRSYRQRSLAKKKAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 602

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE
Sbjct: 603 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 662

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN
Sbjct: 663 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 718

[Close]

BLAST of Cmc01g0013721 vs. NCBI nr
Match: KAA0063362.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 608/656 (92.68%), Postives = 624/656 (95.12%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTIPVLALPDWSLPFMIETDA GSGLGA+LSQNGHPIAFFS+KLSPRAQSKS YERELM
Sbjct: 330 MTTIPVLALPDWSLPFMIETDASGSGLGAILSQNGHPIAFFSQKLSPRAQSKSIYERELM 389

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLS+QKW+HYL+GRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 390 AVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 449

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKAVDALSR++HQ  L AMSTA IV+METVTK+VEKDEELQLIAQQLQTDPSLEGKYS 
Sbjct: 450 QNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSW 509

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGRVV SKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 
Sbjct: 510 LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKK 569

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNK EATKP  V QP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 570 YVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 629

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 630 KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 689

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST  TPFQ
Sbjct: 690 RSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRMTPFQ 749

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISY DKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSK RELK
Sbjct: 750 AVYGRPPPPLISYRDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKSRELK 809

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLR Y QRSLAKKRAEKLAPKYYGPYRITETIGEV YR DLPPEASIHNVF
Sbjct: 810 FKVGDEVYLKLRPYHQRSLAKKRAEKLAPKYYGPYRITETIGEVAYRFDLPPEASIHNVF 869

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKL +QHT+QTQQPKLT +FELQLWPETV+GIRWSPELGANEWLVKWKGL DSE
Sbjct: 870 HISQLKLKLRRQHTIQTQQPKLTVEFELQLWPETVLGIRWSPELGANEWLVKWKGLSDSE 929

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQF SFHLEDKVILEPRGIVRP IINVYKRKGKKGITQ+SMEERKN
Sbjct: 930 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPLIINVYKRKGKKGITQDSMEERKN 985

[Close]

BLAST of Cmc01g0013721 vs. NCBI nr
Match: TYK28064.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 607/656 (92.53%), Postives = 623/656 (94.97%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTIPVL LPDWSLPFMIETDA GSGLGA+LSQNGHPIAFFS+KLSPRAQSKS YERELM
Sbjct: 330 MTTIPVLVLPDWSLPFMIETDASGSGLGAILSQNGHPIAFFSQKLSPRAQSKSIYERELM 389

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLS+QKW+HYL+GRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 390 AVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 449

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKAVDALSR++HQ  L AMSTA IV+METVTK+VEKDEELQLIAQQLQTDPSLEGKYS 
Sbjct: 450 QNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSW 509

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGRVV SKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 
Sbjct: 510 LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKK 569

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNK EATKP  V QP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 570 YVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 629

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 630 KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 689

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST  TPFQ
Sbjct: 690 RSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRMTPFQ 749

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISY DKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSK RELK
Sbjct: 750 AVYGRPPPPLISYRDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKSRELK 809

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLR Y QRSLAKKRAEKLAPKYYGPYRITETIGEV YR DLPPEASIHNVF
Sbjct: 810 FKVGDEVYLKLRPYHQRSLAKKRAEKLAPKYYGPYRITETIGEVAYRFDLPPEASIHNVF 869

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKL +QHT+QTQQPKLT +FELQLWPETV+GIRWSPELGANEWLVKWKGL DSE
Sbjct: 870 HISQLKLKLRRQHTIQTQQPKLTVEFELQLWPETVLGIRWSPELGANEWLVKWKGLSDSE 929

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQF SFHLEDKVILEPRGIVRP IINVYKRKGKKGITQ+SMEERKN
Sbjct: 930 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPLIINVYKRKGKKGITQDSMEERKN 985

[Close]

BLAST of Cmc01g0013721 vs. NCBI nr
Match: TYK03842.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1208.7 bits (3126), Expect = 0.0e+00
Identity = 595/656 (90.70%), Postives = 618/656 (94.21%), Query Frame = 0


Query: 1    MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
            M+TIPVLALPDWSLPFMIETDA GSGLGAVLSQN HPIAFFS+KLS RAQ+KS YERELM
Sbjct: 875  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELM 934

Query: 61   AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
            AVVLSVQKWRHYL+GRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 935  AVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 994

Query: 121  QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
            QNKA DALSR++H  EL A+ST GIVDME VTK+VEKDEELQL+ QQLQT+P+LEGKYSL
Sbjct: 995  QNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYSL 1054

Query: 181  LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
             N  LMYKGRVV SKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK 
Sbjct: 1055 TNRTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKK 1114

Query: 241  YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
            YVEQCEICQRNK EATKP  VLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 1115 YVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 1174

Query: 301  KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
            KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIF+SNFWKEL YAMDTILK
Sbjct: 1175 KYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTILK 1234

Query: 361  RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
            RSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST TTPFQ
Sbjct: 1235 RSTAFHPQTDGQTERINQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQ 1294

Query: 421  AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
             VYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 1295 TVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 1354

Query: 481  FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
            FKVGDEVYLKLR YRQRSLA+KRAEKLAPKYYGPYRITETIGEV YRLDLPPEASIHNVF
Sbjct: 1355 FKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHNVF 1414

Query: 541  HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
            HISQLKLKL  QH VQTQQP+LTA+FELQLWPETV+GIRWSPELGANEWLVKWKGLPDSE
Sbjct: 1415 HISQLKLKLGNQHNVQTQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPDSE 1474

Query: 601  ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
            ATWESVYSMNQQF SFHLEDKVILEPRGIVRPPIINVYKR+GKKG   +S EER+N
Sbjct: 1475 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLHDSKEEREN 1530

[Close]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-73
Identity = 185/572 (32.34%), Postives = 286/572 (50.00%), Query Frame = 0


Query: 5    PVLALPDWSLPFMIETDALGSGLGAVLSQNG-----HPIAFFSRKLSPRAQSKSFYEREL 64
            PVL   D+S   ++ETDA    +GAVLSQ       +P+ ++S K+S    + S  ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQKWRHYLIG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLRYDFEIL 124
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLQNKAVDALSRVNHQSE----------LNAMSTAGIVD---METVTKKVEKDEELQ 184
            Y+PG  N   DALSR+  ++E          +N ++   I D    + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRT 244
            L+  +   D  +E    L +G L+  K +++    + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 245  YKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIE 304
               +     WKG++  I+ YV+ C  CQ NK    KP   LQP P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 305  GLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDK 364
             LP++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 365  IFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPW 424
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I  
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISL 1116

Query: 425  AELWYNTTFHASTHTTPFQAVY----GRPPPPLISYGDKKTPNDEVETLLKERDLAISAL 484
             +  YN   H++T  TPF+ V+       P  L S+ DK   N +      E       +
Sbjct: 1117 VQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTV 1176

Query: 485  KENLTIAQNRMKKFADSKRREL-KFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYR 544
            KE+L     +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ 
Sbjct: 1177 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFY 1236

Query: 545  ITETIGEVVYRLDLPPEAS--IHNVFHISQLK 547
            + +  G   Y LDLP        + FH+S L+
Sbjct: 1237 VLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-73
Identity = 185/572 (32.34%), Postives = 286/572 (50.00%), Query Frame = 0


Query: 5    PVLALPDWSLPFMIETDALGSGLGAVLSQNG-----HPIAFFSRKLSPRAQSKSFYEREL 64
            PVL   D+S   ++ETDA    +GAVLSQ       +P+ ++S K+S    + S  ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQKWRHYLIG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLRYDFEIL 124
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLQNKAVDALSRVNHQSE----------LNAMSTAGIVD---METVTKKVEKDEELQ 184
            Y+PG  N   DALSR+  ++E          +N ++   I D    + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRT 244
            L+  +   D  +E    L +G L+  K +++    + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 245  YKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIE 304
               +     WKG++  I+ YV+ C  CQ NK    KP   LQP P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 305  GLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDK 364
             LP++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 365  IFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPW 424
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I  
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISL 1116

Query: 425  AELWYNTTFHASTHTTPFQAVY----GRPPPPLISYGDKKTPNDEVETLLKERDLAISAL 484
             +  YN   H++T  TPF+ V+       P  L S+ DK   N +      E       +
Sbjct: 1117 VQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTV 1176

Query: 485  KENLTIAQNRMKKFADSKRREL-KFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYR 544
            KE+L     +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ 
Sbjct: 1177 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFY 1236

Query: 545  ITETIGEVVYRLDLPPEAS--IHNVFHISQLK 547
            + +  G   Y LDLP        + FH+S L+
Sbjct: 1237 VLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-73
Identity = 185/572 (32.34%), Postives = 286/572 (50.00%), Query Frame = 0


Query: 5    PVLALPDWSLPFMIETDALGSGLGAVLSQNG-----HPIAFFSRKLSPRAQSKSFYEREL 64
            PVL   D+S   ++ETDA    +GAVLSQ       +P+ ++S K+S    + S  ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQKWRHYLIG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLRYDFEIL 124
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLQNKAVDALSRVNHQSE----------LNAMSTAGIVD---METVTKKVEKDEELQ 184
            Y+PG  N   DALSR+  ++E          +N ++   I D    + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRT 244
            L+  +   D  +E    L +G L+  K +++    + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 245  YKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIE 304
               +     WKG++  I+ YV+ C  CQ NK    KP   LQP P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 305  GLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDK 364
             LP++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 365  IFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPW 424
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I  
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISL 1116

Query: 425  AELWYNTTFHASTHTTPFQAVY----GRPPPPLISYGDKKTPNDEVETLLKERDLAISAL 484
             +  YN   H++T  TPF+ V+       P  L S+ DK   N +      E       +
Sbjct: 1117 VQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTV 1176

Query: 485  KENLTIAQNRMKKFADSKRREL-KFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYR 544
            KE+L     +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ 
Sbjct: 1177 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFY 1236

Query: 545  ITETIGEVVYRLDLPPEAS--IHNVFHISQLK 547
            + +  G   Y LDLP        + FH+S L+
Sbjct: 1237 VLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-73
Identity = 185/572 (32.34%), Postives = 286/572 (50.00%), Query Frame = 0


Query: 5    PVLALPDWSLPFMIETDALGSGLGAVLSQNG-----HPIAFFSRKLSPRAQSKSFYEREL 64
            PVL   D+S   ++ETDA    +GAVLSQ       +P+ ++S K+S    + S  ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQKWRHYLIG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLRYDFEIL 124
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLQNKAVDALSRVNHQSE----------LNAMSTAGIVD---METVTKKVEKDEELQ 184
            Y+PG  N   DALSR+  ++E          +N ++   I D    + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRT 244
            L+  +   D  +E    L +G L+  K +++    + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 245  YKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIE 304
               +     WKG++  I+ YV+ C  CQ NK    KP   LQP P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 305  GLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDK 364
             LP++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 365  IFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPW 424
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I  
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISL 1116

Query: 425  AELWYNTTFHASTHTTPFQAVY----GRPPPPLISYGDKKTPNDEVETLLKERDLAISAL 484
             +  YN   H++T  TPF+ V+       P  L S+ DK   N +      E       +
Sbjct: 1117 VQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTV 1176

Query: 485  KENLTIAQNRMKKFADSKRREL-KFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYR 544
            KE+L     +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ 
Sbjct: 1177 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFY 1236

Query: 545  ITETIGEVVYRLDLPPEAS--IHNVFHISQLK 547
            + +  G   Y LDLP        + FH+S L+
Sbjct: 1237 VLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.4e-73
Identity = 185/572 (32.34%), Postives = 286/572 (50.00%), Query Frame = 0


Query: 5    PVLALPDWSLPFMIETDALGSGLGAVLSQNG-----HPIAFFSRKLSPRAQSKSFYEREL 64
            PVL   D+S   ++ETDA    +GAVLSQ       +P+ ++S K+S    + S  ++E+
Sbjct: 697  PVLRHFDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEM 756

Query: 65   MAVVLSVQKWRHYLIG--RRFTIISDQKAL--KFLLEQREVQPQFQKWLTKLLRYDFEIL 124
            +A++ S++ WRHYL      F I++D + L  +   E      +  +W   L  ++FEI 
Sbjct: 757  LAIIKSLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEIN 816

Query: 125  YQPGLQNKAVDALSRVNHQSE----------LNAMSTAGIVD---METVTKKVEKDEELQ 184
            Y+PG  N   DALSR+  ++E          +N ++   I D    + VT+     + L 
Sbjct: 817  YRPGSANHIADALSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLLN 876

Query: 185  LIAQQLQTDPSLEGKYSLLNGKLM-YKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRT 244
            L+  +   D  +E    L +G L+  K +++    + L  +++  +H+     H G    
Sbjct: 877  LLNNE---DKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELL 936

Query: 245  YKRMSGELFWKGMKTDIKNYVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIE 304
               +     WKG++  I+ YV+ C  CQ NK    KP   LQP P  +R  E  +MDFI 
Sbjct: 937  TNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFIT 996

Query: 305  GLPKAGGMNVIMVVVDRLSKYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDK 364
             LP++ G N + VVVDR SK A  V      +A+Q A  F  +++   G PK II+D D 
Sbjct: 997  ALPESSGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDH 1056

Query: 365  IFLSNFWKELLYAMDTILKRSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPW 424
            IF S  WK+  +  + ++K S  + PQTDGQTER NQ +E  LRC C+  PN W   I  
Sbjct: 1057 IFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISL 1116

Query: 425  AELWYNTTFHASTHTTPFQAVY----GRPPPPLISYGDKKTPNDEVETLLKERDLAISAL 484
             +  YN   H++T  TPF+ V+       P  L S+ DK   N +      E       +
Sbjct: 1117 VQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQ------ETIQVFQTV 1176

Query: 485  KENLTIAQNRMKKFADSKRREL-KFKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYR 544
            KE+L     +MKK+ D K +E+ +F+ GD V +K    R ++    ++ KLAP + GP+ 
Sbjct: 1177 KEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVK----RTKTGFLHKSNKLAPSFAGPFY 1236

Query: 545  ITETIGEVVYRLDLPPEAS--IHNVFHISQLK 547
            + +  G   Y LDLP        + FH+S L+
Sbjct: 1237 VLQKSGPNNYELDLPDSIKHMFSSTFHVSHLE 1255

[Close]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL
Match: A0A5A7TZ91 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G002180 PE=4 SV=1)

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 641/656 (97.71%), Postives = 646/656 (98.48%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTI VLALPDWSLPFMIETDA GSGLGAVLSQNGHPIAFFS+KLSPRAQSKSFYERELM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 182

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKA DALSRV+HQSELNAMSTAGIVDMETVTK+VEKDEELQLIAQQLQTDPSLEGKYSL
Sbjct: 183 QNKAADALSRVDHQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSL 242

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGR VFSKSSSLIPSLLHTFHDSIF GHSGFLRTYKRMSGELFWKGMKTDIKN
Sbjct: 243 LNGKLMYKGRAVFSKSSSLIPSLLHTFHDSIFRGHSGFLRTYKRMSGELFWKGMKTDIKN 302

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNKYE TKPGEVLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 303 YVEQCEICQRNKYETTKPGEVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 362

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVATEFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 363 KYAYFVTMKHPFSAKQVATEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 422

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFHPQTDGQTERVN+CLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ
Sbjct: 423 RSTAFHPQTDGQTERVNRCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 482

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 483 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 542

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLRSYRQRSLAKK+AEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF
Sbjct: 543 FKVGDEVYLKLRSYRQRSLAKKKAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 602

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE
Sbjct: 603 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 662

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN
Sbjct: 663 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 718

[Close]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL
Match: A0A5D3C9J2 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001010 PE=4 SV=1)

HSP 1 Score: 1290.4 bits (3338), Expect = 0.0e+00
Identity = 640/656 (97.56%), Postives = 645/656 (98.32%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTI VLALPDWSLPFMIETDA GSGLGAVLSQNGHPIAFFS+KLSPRAQSKSFYERELM
Sbjct: 63  MTTILVLALPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQKLSPRAQSKSFYERELM 122

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 123 AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 182

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKA DALSRV+HQSELNAMSTAGIVDMETVTK+VEKDEELQLIAQQLQTDPSLEGKYSL
Sbjct: 183 QNKAADALSRVDHQSELNAMSTAGIVDMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSL 242

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGR VFSKSSSLIPSLLHTFHDSIF GHSGFLRTYKRMSGELFWKGMKTDIKN
Sbjct: 243 LNGKLMYKGRAVFSKSSSLIPSLLHTFHDSIFRGHSGFLRTYKRMSGELFWKGMKTDIKN 302

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNKYE TKPGEVLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 303 YVEQCEICQRNKYETTKPGEVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 362

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVATEFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 363 KYAYFVTMKHPFSAKQVATEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 422

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFHPQTDGQTERVN+CLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ
Sbjct: 423 RSTAFHPQTDGQTERVNRCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 482

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVY RPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 483 AVYVRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 542

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLRSYRQRSLAKK+AEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF
Sbjct: 543 FKVGDEVYLKLRSYRQRSLAKKKAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 602

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE
Sbjct: 603 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 662

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN
Sbjct: 663 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 718

[Close]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL
Match: A0A5A7V529 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1505G00350 PE=4 SV=1)

HSP 1 Score: 1225.7 bits (3170), Expect = 0.0e+00
Identity = 608/656 (92.68%), Postives = 624/656 (95.12%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTIPVLALPDWSLPFMIETDA GSGLGA+LSQNGHPIAFFS+KLSPRAQSKS YERELM
Sbjct: 330 MTTIPVLALPDWSLPFMIETDASGSGLGAILSQNGHPIAFFSQKLSPRAQSKSIYERELM 389

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLS+QKW+HYL+GRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 390 AVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 449

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKAVDALSR++HQ  L AMSTA IV+METVTK+VEKDEELQLIAQQLQTDPSLEGKYS 
Sbjct: 450 QNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSW 509

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGRVV SKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 
Sbjct: 510 LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKK 569

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNK EATKP  V QP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 570 YVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 629

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 630 KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 689

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST  TPFQ
Sbjct: 690 RSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRMTPFQ 749

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISY DKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSK RELK
Sbjct: 750 AVYGRPPPPLISYRDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKSRELK 809

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLR Y QRSLAKKRAEKLAPKYYGPYRITETIGEV YR DLPPEASIHNVF
Sbjct: 810 FKVGDEVYLKLRPYHQRSLAKKRAEKLAPKYYGPYRITETIGEVAYRFDLPPEASIHNVF 869

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKL +QHT+QTQQPKLT +FELQLWPETV+GIRWSPELGANEWLVKWKGL DSE
Sbjct: 870 HISQLKLKLRRQHTIQTQQPKLTVEFELQLWPETVLGIRWSPELGANEWLVKWKGLSDSE 929

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQF SFHLEDKVILEPRGIVRP IINVYKRKGKKGITQ+SMEERKN
Sbjct: 930 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPLIINVYKRKGKKGITQDSMEERKN 985

[Close]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL
Match: A0A5D3DX13 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G003250 PE=4 SV=1)

HSP 1 Score: 1224.2 bits (3166), Expect = 0.0e+00
Identity = 607/656 (92.53%), Postives = 623/656 (94.97%), Query Frame = 0


Query: 1   MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
           MTTIPVL LPDWSLPFMIETDA GSGLGA+LSQNGHPIAFFS+KLSPRAQSKS YERELM
Sbjct: 330 MTTIPVLVLPDWSLPFMIETDASGSGLGAILSQNGHPIAFFSQKLSPRAQSKSIYERELM 389

Query: 61  AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
           AVVLS+QKW+HYL+GRRFTIISDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 390 AVVLSMQKWQHYLLGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 449

Query: 121 QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
           QNKAVDALSR++HQ  L AMSTA IV+METVTK+VEKDEELQLIAQQLQTDPSLEGKYS 
Sbjct: 450 QNKAVDALSRMDHQLGLKAMSTARIVNMETVTKEVEKDEELQLIAQQLQTDPSLEGKYSW 509

Query: 181 LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
           LNGKLMYKGRVV SKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIK 
Sbjct: 510 LNGKLMYKGRVVLSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKK 569

Query: 241 YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
           YVEQCEICQRNK EATKP  V QP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 570 YVEQCEICQRNKSEATKPAGVFQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 629

Query: 301 KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
           KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIFLSNFWKEL YAMDTILK
Sbjct: 630 KYAYFVTMKHPFSAKQVAIEFIDKIVRRHGIPKSIISDRDKIFLSNFWKELFYAMDTILK 689

Query: 361 RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
           RSTAFH QTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST  TPFQ
Sbjct: 690 RSTAFHHQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRMTPFQ 749

Query: 421 AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
           AVYGRPPPPLISY DKKTPNDEVET+LKERDLAISALKENLTIAQNRMKKFADSK RELK
Sbjct: 750 AVYGRPPPPLISYRDKKTPNDEVETMLKERDLAISALKENLTIAQNRMKKFADSKSRELK 809

Query: 481 FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
           FKVGDEVYLKLR Y QRSLAKKRAEKLAPKYYGPYRITETIGEV YR DLPPEASIHNVF
Sbjct: 810 FKVGDEVYLKLRPYHQRSLAKKRAEKLAPKYYGPYRITETIGEVAYRFDLPPEASIHNVF 869

Query: 541 HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
           HISQLKLKL +QHT+QTQQPKLT +FELQLWPETV+GIRWSPELGANEWLVKWKGL DSE
Sbjct: 870 HISQLKLKLRRQHTIQTQQPKLTVEFELQLWPETVLGIRWSPELGANEWLVKWKGLSDSE 929

Query: 601 ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
           ATWESVYSMNQQF SFHLEDKVILEPRGIVRP IINVYKRKGKKGITQ+SMEERKN
Sbjct: 930 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPLIINVYKRKGKKGITQDSMEERKN 985

[Close]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL
Match: A0A5D3BYA1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00360 PE=4 SV=1)

HSP 1 Score: 1208.7 bits (3126), Expect = 0.0e+00
Identity = 595/656 (90.70%), Postives = 618/656 (94.21%), Query Frame = 0


Query: 1    MTTIPVLALPDWSLPFMIETDALGSGLGAVLSQNGHPIAFFSRKLSPRAQSKSFYERELM 60
            M+TIPVLALPDWSLPFMIETDA GSGLGAVLSQN HPIAFFS+KLS RAQ+KS YERELM
Sbjct: 875  MSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQKLSTRAQAKSIYERELM 934

Query: 61   AVVLSVQKWRHYLIGRRFTIISDQKALKFLLEQREVQPQFQKWLTKLLRYDFEILYQPGL 120
            AVVLSVQKWRHYL+GRRFTI+SDQKALKFLLEQREVQPQFQKWLTKLL YDFEILYQPGL
Sbjct: 935  AVVLSVQKWRHYLLGRRFTIMSDQKALKFLLEQREVQPQFQKWLTKLLGYDFEILYQPGL 994

Query: 121  QNKAVDALSRVNHQSELNAMSTAGIVDMETVTKKVEKDEELQLIAQQLQTDPSLEGKYSL 180
            QNKA DALSR++H  EL A+ST GIVDME VTK+VEKDEELQL+ QQLQT+P+LEGKYSL
Sbjct: 995  QNKAADALSRMDHSIELKALSTTGIVDMEVVTKEVEKDEELQLLIQQLQTNPALEGKYSL 1054

Query: 181  LNGKLMYKGRVVFSKSSSLIPSLLHTFHDSIFGGHSGFLRTYKRMSGELFWKGMKTDIKN 240
             N  LMYKGRVV SKSSS+IPSLLHTFHDSI GGHSGFLRTYKRMSGELFWKGMK DIK 
Sbjct: 1055 TNRTLMYKGRVVLSKSSSIIPSLLHTFHDSILGGHSGFLRTYKRMSGELFWKGMKEDIKK 1114

Query: 241  YVEQCEICQRNKYEATKPGEVLQPQPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 300
            YVEQCEICQRNK EATKP  VLQP PIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS
Sbjct: 1115 YVEQCEICQRNKSEATKPAGVLQPLPIPDRILEDWTMDFIEGLPKAGGMNVIMVVVDRLS 1174

Query: 301  KYAYFVTMKHPFSAKQVATEFIDKIVRIHGIPKSIISDRDKIFLSNFWKELLYAMDTILK 360
            KYAYFVTMKHPFSAKQVA EFIDKIVR HGIPKSIISDRDKIF+SNFWKEL YAMDTILK
Sbjct: 1175 KYAYFVTMKHPFSAKQVAMEFIDKIVRRHGIPKSIISDRDKIFVSNFWKELFYAMDTILK 1234

Query: 361  RSTAFHPQTDGQTERVNQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHASTHTTPFQ 420
            RSTAFHPQTDGQTER+NQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFH+ST TTPFQ
Sbjct: 1235 RSTAFHPQTDGQTERINQCLETYLRCFCNEQPNKWHQFIPWAELWYNTTFHSSTRTTPFQ 1294

Query: 421  AVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 480
             VYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK
Sbjct: 1295 TVYGRPPPPLISYGDKKTPNDEVETLLKERDLAISALKENLTIAQNRMKKFADSKRRELK 1354

Query: 481  FKVGDEVYLKLRSYRQRSLAKKRAEKLAPKYYGPYRITETIGEVVYRLDLPPEASIHNVF 540
            FKVGDEVYLKLR YRQRSLA+KRAEKLAPKYYGPYRITETIGEV YRLDLPPEASIHNVF
Sbjct: 1355 FKVGDEVYLKLRPYRQRSLARKRAEKLAPKYYGPYRITETIGEVAYRLDLPPEASIHNVF 1414

Query: 541  HISQLKLKLDKQHTVQTQQPKLTAKFELQLWPETVMGIRWSPELGANEWLVKWKGLPDSE 600
            HISQLKLKL  QH VQTQQP+LTA+FELQLWPETV+GIRWSPELGANEWLVKWKGLPDSE
Sbjct: 1415 HISQLKLKLGNQHNVQTQQPQLTAEFELQLWPETVLGIRWSPELGANEWLVKWKGLPDSE 1474

Query: 601  ATWESVYSMNQQFLSFHLEDKVILEPRGIVRPPIINVYKRKGKKGITQNSMEERKN 657
            ATWESVYSMNQQF SFHLEDKVILEPRGIVRPPIINVYKR+GKKG   +S EER+N
Sbjct: 1475 ATWESVYSMNQQFPSFHLEDKVILEPRGIVRPPIINVYKRRGKKGKLHDSKEEREN 1530

The following BLAST results are available for this feature:

BLAST of Cmc01g0013721 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048288.1	0.0e+00	97.71	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK07972.1	0.0e+00	97.56	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0063362.1	0.0e+00	92.68	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK28064.1	0.0e+00	92.53	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK03842.1	0.0e+00	90.70	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc01g0013721 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	4.4e-73	32.34	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	4.4e-73	32.34	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	4.4e-73	32.34	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	4.4e-73	32.34	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	4.4e-73	32.34	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZ91	0.0e+00	97.71	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3C9J2	0.0e+00	97.56	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7V529	0.0e+00	92.68	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DX13	0.0e+00	92.53	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3BYA1	0.0e+00	90.70	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc01g0013721 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 454..474
None	No IPR available	GENE3D	3.10.20.370		coord: 11..81 e-value: 4.0E-8 score: 35.1
None	No IPR available	GENE3D	2.40.50.40		coord: 573..621 e-value: 4.6E-6 score: 28.3
None	No IPR available	GENE3D	1.10.340.70		coord: 162..252 e-value: 4.7E-16 score: 60.8
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 4..421
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 18..130 e-value: 2.12398E-48 score: 163.432
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 197..253 e-value: 1.8E-18 score: 66.3
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 11..110 e-value: 6.7E-28 score: 97.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 261..463 e-value: 3.6E-49 score: 168.8
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 573..605 e-value: 2.2E-6 score: 27.5
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 570..605 score: 9.987301
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 262..426 score: 22.032061
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..116
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 535..611
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 264..426

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0013721.1	Cmc01g0013721.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding