Homology
BLAST of Cmc01g0013621 vs. NCBI nr
Match:
TYK06518.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 428.3 bits (1100), Expect = 4.0e-116
Identity = 212/222 (95.50%), Postives = 215/222 (96.85%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPEIVSETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLSNRMHDPEIVSE PVSETVDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQEQ 180
EAIKSELDSL MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQ+Q
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTAFLN 223
GVDYFDTYSPVTKIT IRALIALAAI+NLLIHQMDVKTAFLN
Sbjct: 911 GVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLN 952
BLAST of Cmc01g0013621 vs. NCBI nr
Match:
KAA0036643.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 380.2 bits (975), Expect = 1.3e-101
Identity = 186/198 (93.94%), Postives = 189/198 (95.45%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPEIVSETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLSNRMHDPEIVSE PVSE VDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSEIVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LI+ED KTYQEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLINEDSKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQEQ 180
EAIKSELDSL MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQ+Q
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITIIR 199
GVDYFDTYSPVTKIT IR
Sbjct: 911 GVDYFDTYSPVTKITTIR 928
BLAST of Cmc01g0013621 vs. NCBI nr
Match:
KAA0042080.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK18022.1 ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 366.7 bits (940), Expect = 1.4e-97
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLS RMHDPE IVSE PVSETVDT NL
Sbjct: 461 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSKRMHDPENPSIVSEIPVSETVDTSNLR 520
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELELRRSKRQRTEKSFG DFLSTFIVERRDEID NFTNLYLIDEDPKTYQEALNSVD S
Sbjct: 521 CELELRRSKRQRTEKSFGQDFLSTFIVERRDEIDRNFTNLYLIDEDPKTYQEALNSVDLS 580
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 180
MWKEAI SELDSLVMNHTW+LVDLPM NKPIRCKWIFKRKTKPNG IERYKARLVVVGYT
Sbjct: 581 MWKEAINSELDSLVMNHTWDLVDLPMENKPIRCKWIFKRKTKPNGSIERYKARLVVVGYT 640
Query: 181 QEQGVDYFDTYSPVTKITIIRAL 201
Q+QG+DYFDTYSPVTKIT IRAL
Sbjct: 641 QKQGIDYFDTYSPVTKITTIRAL 663
BLAST of Cmc01g0013621 vs. NCBI nr
Match:
KAA0038001.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 345.9 bits (886), Expect = 2.6e-91
Identity = 171/194 (88.14%), Postives = 178/194 (91.75%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MCLNDKTINESRDAE FEHVF LKQSLYA SLS RMHDPE IVSET VSE V+T NL
Sbjct: 459 MCLNDKTINESRDAEFFEHVFSLKQSLYAPSLSKRMHDPENTSIVSETHVSEIVNTSNLR 518
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELELRRSKRQRTEKSF PDFLSTFIVERRDEID NFTNLYLIDEDPKTYQE LNSV+ S
Sbjct: 519 CELELRRSKRQRTEKSFSPDFLSTFIVERRDEIDFNFTNLYLIDEDPKTYQETLNSVELS 578
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 180
MWKEAIKSELDSLVMNHTW+LVDLPMGNKPIRC+WIFKRKTKPNG +ERYKARLVVVGYT
Sbjct: 579 MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCRWIFKRKTKPNGSMERYKARLVVVGYT 638
Query: 181 QEQGVDYFDTYSPV 192
Q+QG+DYFDTYSPV
Sbjct: 639 QKQGIDYFDTYSPV 652
BLAST of Cmc01g0013621 vs. NCBI nr
Match:
TYJ97996.1 (ty1-copia retrotransposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 330.5 bits (846), Expect = 1.1e-86
Identity = 164/180 (91.11%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MC NDKTINESRDAE FEHVFPLKQSL A SLS RMHDPE IVSETPVSETV+T NL
Sbjct: 315 MCFNDKTINESRDAEFFEHVFPLKQSLSAPSLSKRMHDPENPSIVSETPVSETVNTSNLR 374
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELEL RSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSV+SS
Sbjct: 375 CELELMRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVESS 434
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 178
MWKEAIKSELDSLVMNHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYT
Sbjct: 435 MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT 494
BLAST of Cmc01g0013621 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 118.2 bits (295), Expect = 1.2e-25
Identity = 65/161 (40.37%), Postives = 102/161 (63.35%), Query Frame = 0
Query: 62 LRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWKE 121
LRRS+R R E P ST V D D +P++ +E L+ + + +
Sbjct: 784 LRRSERPRVESRRYP---STEYVLISD------------DREPESLKEVLSHPEKNQLMK 843
Query: 122 AIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQEQG 181
A++ E++SL N T++LV+LP G +P++CKW+FK K + + RYKARLVV G+ Q++G
Sbjct: 844 AMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKG 903
Query: 182 VDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTAFLN 223
+D+ + +SPV K+T IR +++LAA +L + Q+DVKTAFL+
Sbjct: 904 IDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLH 929
BLAST of Cmc01g0013621 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 107.1 bits (266), Expect = 2.7e-22
Identity = 63/173 (36.42%), Postives = 96/173 (55.49%), Query Frame = 0
Query: 53 TPNLSCELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDED-PKTYQEAL 112
T N E+ RRS+R +T+ + E + ++ N + I D P ++ E
Sbjct: 846 TKNDGIEIINRRSERLKTKPQISYN-------EEDNSLNKVVLNAHTIFNDVPNSFDEIQ 905
Query: 113 NSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARL 172
D S W+EAI +EL++ +N+TW + P + +W+F K G RYKARL
Sbjct: 906 YRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARL 965
Query: 173 VVVGYTQEQGVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTAFLNVT 225
V G+TQ+ +DY +T++PV +I+ R +++L YNL +HQMDVKTAFLN T
Sbjct: 966 VARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGT 1011
BLAST of Cmc01g0013621 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 5.6e-20
Identity = 51/125 (40.80%), Postives = 77/125 (61.60%), Query Frame = 0
Query: 101 DEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTK 160
+ +P+T A+ ++ W+ A+ SE+++ + NHTW+LV P + I C+WIF +K
Sbjct: 953 ESEPRT---AIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYN 1012
Query: 161 PNGLIERYKARLVVVGYTQEQGVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTA 220
+G + RYKARLV GY Q G+DY +T+SPV K T IR ++ +A + I Q+DV A
Sbjct: 1013 SDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1072
Query: 221 FLNVT 225
FL T
Sbjct: 1073 FLQGT 1074
BLAST of Cmc01g0013621 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 7.3e-20
Identity = 51/125 (40.80%), Postives = 78/125 (62.40%), Query Frame = 0
Query: 101 DEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPI-RCKWIFKRKTK 160
+ +P+T A+ ++ W++A+ SE+++ + NHTW+LV P + I C+WIF +K
Sbjct: 936 NSEPRT---AIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFN 995
Query: 161 PNGLIERYKARLVVVGYTQEQGVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTA 220
+G + RYKARLV GY Q G+DY +T+SPV K T IR ++ +A + I Q+DV A
Sbjct: 996 SDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNA 1055
Query: 221 FLNVT 225
FL T
Sbjct: 1056 FLQGT 1057
BLAST of Cmc01g0013621 vs. ExPASy Swiss-Prot
Match:
P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 1.1e-15
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 100 IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTK 159
I ++PK+ AL W +A++ ELD+L N TW LV P+ + CKW+FK K
Sbjct: 24 IKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 83
Query: 160 PNGLIERYKARLVVVGYTQEQGVDYFDTYSPVTKITIIRALIALA 205
+G ++R KARLV G+ QE+G+ + +TYSPV + IR ++ +A
Sbjct: 84 SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
BLAST of Cmc01g0013621 vs. ExPASy TrEMBL
Match:
A0A5D3C5T2 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00500 PE=4 SV=1)
HSP 1 Score: 428.3 bits (1100), Expect = 1.9e-116
Identity = 212/222 (95.50%), Postives = 215/222 (96.85%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPEIVSETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLSNRMHDPEIVSE PVSETVDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSETVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LIDEDPKTYQEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLIDEDPKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQEQ 180
EAIKSELDSL MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQ+Q
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTAFLN 223
GVDYFDTYSPVTKIT IRALIALAAI+NLLIHQMDVKTAFLN
Sbjct: 911 GVDYFDTYSPVTKITTIRALIALAAIHNLLIHQMDVKTAFLN 952
BLAST of Cmc01g0013621 vs. ExPASy TrEMBL
Match:
A0A5A7T166 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold3921G00120 PE=4 SV=1)
HSP 1 Score: 380.2 bits (975), Expect = 6.1e-102
Identity = 186/198 (93.94%), Postives = 189/198 (95.45%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPEIVSETPVSETVDTPNLSCEL 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLSNRMHDPEIVSE PVSE VDTPNLSCEL
Sbjct: 731 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSNRMHDPEIVSEIPVSEIVDTPNLSCEL 790
Query: 61 ELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSSMWK 120
E RRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNL+LI+ED KTYQEALNSVDS MWK
Sbjct: 791 EPRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLFLINEDSKTYQEALNSVDSRMWK 850
Query: 121 EAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQEQ 180
EAIKSELDSL MNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQ+Q
Sbjct: 851 EAIKSELDSLAMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYTQKQ 910
Query: 181 GVDYFDTYSPVTKITIIR 199
GVDYFDTYSPVTKIT IR
Sbjct: 911 GVDYFDTYSPVTKITTIR 928
BLAST of Cmc01g0013621 vs. ExPASy TrEMBL
Match:
A0A5A7TFH9 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003410 PE=4 SV=1)
HSP 1 Score: 366.7 bits (940), Expect = 6.9e-98
Identity = 184/203 (90.64%), Postives = 187/203 (92.12%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MCLNDKTINESRDAE FEHVFPLKQSLYA SLS RMHDPE IVSE PVSETVDT NL
Sbjct: 461 MCLNDKTINESRDAEFFEHVFPLKQSLYAPSLSKRMHDPENPSIVSEIPVSETVDTSNLR 520
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELELRRSKRQRTEKSFG DFLSTFIVERRDEID NFTNLYLIDEDPKTYQEALNSVD S
Sbjct: 521 CELELRRSKRQRTEKSFGQDFLSTFIVERRDEIDRNFTNLYLIDEDPKTYQEALNSVDLS 580
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 180
MWKEAI SELDSLVMNHTW+LVDLPM NKPIRCKWIFKRKTKPNG IERYKARLVVVGYT
Sbjct: 581 MWKEAINSELDSLVMNHTWDLVDLPMENKPIRCKWIFKRKTKPNGSIERYKARLVVVGYT 640
Query: 181 QEQGVDYFDTYSPVTKITIIRAL 201
Q+QG+DYFDTYSPVTKIT IRAL
Sbjct: 641 QKQGIDYFDTYSPVTKITTIRAL 663
BLAST of Cmc01g0013621 vs. ExPASy TrEMBL
Match:
A0A5A7T8N6 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold36G001890 PE=4 SV=1)
HSP 1 Score: 345.9 bits (886), Expect = 1.3e-91
Identity = 171/194 (88.14%), Postives = 178/194 (91.75%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MCLNDKTINESRDAE FEHVF LKQSLYA SLS RMHDPE IVSET VSE V+T NL
Sbjct: 459 MCLNDKTINESRDAEFFEHVFSLKQSLYAPSLSKRMHDPENTSIVSETHVSEIVNTSNLR 518
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELELRRSKRQRTEKSF PDFLSTFIVERRDEID NFTNLYLIDEDPKTYQE LNSV+ S
Sbjct: 519 CELELRRSKRQRTEKSFSPDFLSTFIVERRDEIDFNFTNLYLIDEDPKTYQETLNSVELS 578
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 180
MWKEAIKSELDSLVMNHTW+LVDLPMGNKPIRC+WIFKRKTKPNG +ERYKARLVVVGYT
Sbjct: 579 MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCRWIFKRKTKPNGSMERYKARLVVVGYT 638
Query: 181 QEQGVDYFDTYSPV 192
Q+QG+DYFDTYSPV
Sbjct: 639 QKQGIDYFDTYSPV 652
BLAST of Cmc01g0013621 vs. ExPASy TrEMBL
Match:
A0A5D3BFX4 (Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold487G00190 PE=4 SV=1)
HSP 1 Score: 330.5 bits (846), Expect = 5.5e-87
Identity = 164/180 (91.11%), Postives = 167/180 (92.78%), Query Frame = 0
Query: 1 MCLNDKTINESRDAELFEHVFPLKQSLYALSLSNRMHDPE---IVSETPVSETVDTPNLS 60
MC NDKTINESRDAE FEHVFPLKQSL A SLS RMHDPE IVSETPVSETV+T NL
Sbjct: 315 MCFNDKTINESRDAEFFEHVFPLKQSLSAPSLSKRMHDPENPSIVSETPVSETVNTSNLR 374
Query: 61 CELELRRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVDSS 120
CELEL RSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSV+SS
Sbjct: 375 CELELMRSKRQRTEKSFGPDFLSTFIVERRDEIDCNFTNLYLIDEDPKTYQEALNSVESS 434
Query: 121 MWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPNGLIERYKARLVVVGYT 178
MWKEAIKSELDSLVMNHTW+LVDLPMGNKPIRCKWIFKRKTKPNG IERYK RLVVVGYT
Sbjct: 435 MWKEAIKSELDSLVMNHTWDLVDLPMGNKPIRCKWIFKRKTKPNGSIERYKTRLVVVGYT 494
BLAST of Cmc01g0013621 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 129.0 bits (323), Expect = 4.7e-30
Identity = 56/121 (46.28%), Postives = 84/121 (69.42%), Query Frame = 0
Query: 102 EDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTKPN 161
++P TY EA + +W A+ E+ ++ HTWE+ LP KPI CKW++K K +
Sbjct: 84 KEPSTYNEAKEFL---VWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSD 143
Query: 162 GLIERYKARLVVVGYTQEQGVDYFDTYSPVTKITIIRALIALAAIYNLLIHQMDVKTAFL 221
G IERYKARLV GYTQ++G+D+ +T+SPV K+T ++ ++A++AIYN +HQ+D+ AFL
Sbjct: 144 GTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 201
Query: 222 N 223
N
Sbjct: 204 N 201
BLAST of Cmc01g0013621 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 85.1 bits (209), Expect = 7.7e-17
Identity = 42/105 (40.00%), Postives = 64/105 (60.95%), Query Frame = 0
Query: 100 IDEDPKTYQEALNSVDSSMWKEAIKSELDSLVMNHTWELVDLPMGNKPIRCKWIFKRKTK 159
I ++PK+ AL W +A++ ELD+L N TW LV P+ + CKW+FK K
Sbjct: 24 IKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLH 83
Query: 160 PNGLIERYKARLVVVGYTQEQGVDYFDTYSPVTKITIIRALIALA 205
+G ++R KARLV G+ QE+G+ + +TYSPV + IR ++ +A
Sbjct: 84 SDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK06518.1 | 4.0e-116 | 95.50 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0036643.1 | 1.3e-101 | 93.94 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
KAA0042080.1 | 1.4e-97 | 90.64 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] >TYK18022.1 ty1-cop... | [more] |
KAA0038001.1 | 2.6e-91 | 88.14 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
TYJ97996.1 | 1.1e-86 | 91.11 | ty1-copia retrotransposon protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.2e-25 | 40.37 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 2.7e-22 | 36.42 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q94HW2 | 5.6e-20 | 40.80 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 7.3e-20 | 40.80 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P92520 | 1.1e-15 | 40.00 | Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C5T2 | 1.9e-116 | 95.50 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7T166 | 6.1e-102 | 93.94 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5A7TFH9 | 6.9e-98 | 90.64 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
A0A5A7T8N6 | 1.3e-91 | 88.14 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3BFX4 | 5.5e-87 | 91.11 | Ty1-copia retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 4.7e-30 | 46.28 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 7.7e-17 | 40.00 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |