Cmc01g0013471 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0013471
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionE3 ubiquitin-protein ligase
LocationCMiso1.1chr01: 10005764 .. 10008997 (-)
RNA-Seq ExpressionCmc01g0013471
SyntenyCmc01g0013471
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGTTTGACCATTAAATAAATAAATAAATAACAAAACTTAATGAAAACACAAACACACATACTCTTTGTATTTGCAAGATAAAGGATGGGGAGATATTATTATTCTCTCTCAGTCTCACTCCCAATTATGAACCAATAAACAAGCAGTCCCCAAATTTAAAAATTGGGTCTTTCTCATCTCCATCTTCTTGATGTTGATGTCTTTTACAGATTGAATTTCAATCAAGAAACAAAGGAAGAAAGAAGAAGAAGAATCTAAGAAACAGTTAGTTGGGTTTTTTTTTTTTTTTTTTAGCGTTTTGGATTAGCTCTCCACGTTGCCATTTCAAATTGGGCGGGCCACTCTGAGCTTCTCCTCTCTTCAACAATGGTGTGTGGCCAACCGCCATTCCCTCTCTTTGCTTTAAATATCTGTCTTTGAGGGCCACTCCCCCCGACACCTCCTTCAATCTTGCTAGTTGGATTTGGTGGCCAACCATTTACCTTCTTCAGAAAAACTACTTTCTTTTGTTTCTTTCTCTTATCCATTTTGAAAACCCCTTGTGGGGTTTTGTTTATATCTCTCTATTTTGAATCTTGCAGGAGTATCTGGGTATGGGGGTTTGGAATTACTGATTATGACAGAAGAAGATTTGCGGTTCATTCAACTGTTGTAAGGAAAAAATAAAAAAAAGAGAACGATACGGTTGATTATTGATTATTTCTTCTTCTCTATTTGGTCTTTTTTGTTTTATTTTTTATTTTTTTGAAGTTTGGCCAACGCCTTTAGCGCATTTCTAAACCGTTCGATTGTTGATTTCATCTGAGTTTCTCTGTTTTATTTTTTTATTTTTTCATTTTTCTTGAGTTTCTGGCCACCCTCTGCGACCCAACATCAACTTCCTGTCTTCTTTTTTTCAACCGTTTTTTGTTGCCTTCTTCTTGCTCTTTATGCCTTTATATACGCCCTGATTCCAATTTTTTGTTTGTTATGAGATACCCTTTTAAAGCTTCTCTCTGAATTGGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGCTTCACTGAATACCTTATAGTTTGGGACATGAGACTTTCATGAATTTGGATCGTTTGCTTTTGTCCCAAAACGGGTTCCGTTTCTCTTTTAATCATTACGGGCAAAACTTATGTGATTTTTGTTGTCTTCGTGCTTGGACTTGCCCTTTCGTTTTAGTTATCCTTCCATGAGAACCATCCCCTTTTCTTTCTTCATATTTCCAACTTTCTCCATGTCCGTGTAGTTTGTTGTCTTGTTCTTGATAAGGAACCTGGTTGGTTTTAGTTGGAAAAGGTCATTTTGCAATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCATTTAATTCTGATGCTACTACGTCTTTCATATCAATTTCGGTGTCTGGAGAAGATGGCGCTATGGCTGATGATATCAGAAACGAAGCATCTGATTCTGTCCCTCCTTCCTTTTGGGTTAAAATGGCGATGAAAATATCTAGAGCTAGATGGTTTATATTTTTGAGAAGAGTTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCTAATCCTTTCAATTCGGGTTTGTGGATGGCGATGGAACTTGTAGCTCTGTTGTTTCAGCTAATTATCTCAGTGTTTACTCTTGCCATTTCACAGGCTGAAAAGCCAGTTTGGCCTATGAGGTTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAATGCAGGGAAATGATAACCGTCTTTCAGATATTGAACATGAACAGCAGAGGAGCAATGAATCATCAAGGTAATCTTTAACCTACAGTTTCCTATGAATTTATTTCATAGTATTTCCTTGAAAAGCTACTGAGGATTGAGTTTAGAATGGACAAGAAGCTTAGGGTCAATCATGTTCTAACATTCTTTTCCCATAACGTTCAGGTTAAAAGTTCATGCAATTTTTATGAGTCTTTATTTAACTCAAAAACTGAATTGAAGAACGGAAGATTTTCAAATGACCCACAGGGTTAAAAGTAATAATATTGTGTAACTGAAAATAAGTCAATGCAGACTAGGGAGATCAATTAAGAGTAAACACAATATTTTATTGAGTTTCTATTTCTTCATTATTCAAAAAGTTTGCATCTGCAAAATTTGACGTCTAATCTGACTACTTTTATTCAACATAATTCAGGTATTCACATTTGATGAACAGATGCCGCACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGATTCTCGCTTAGCCTCATTCCAGAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTACAGGGTATAACATTAACATGGGATCATCCGAAAAAGGGGCATCAGATGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCGGTCGAAGCCAACATCAACCCCAGAAGTCAACCTGACAATAGCAATACAGGACTTCTAAAAGAGGATCCAGTAAGTAATAATTCTCTTCCTGGTTTTGAAAAAACTACAGAAGAAAATTCAAATAAAAAGAGCGATGGGGGACTAAAATACTTCCGGTTGCCTCCGATTTTGCAGGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAGAGAGCCAAGAAATTAGTAGAAGCAGTTCAAGTGCTTCATTGGGTTTTTTTTCTCTTCTTTTTCCCTTCCAAATGGAAATTTTCTCATTTTCACTGTTTTTATGGTTTAGTCCGTAGATTAGAGTCTCACATGGTTACTTGAGTGAGTTCTAGAGCTCACCAGTTACCTAATTATACTCAAATACTTAAGGTTACATGTAGCAGGAAAATGATGCCTTATTTGTAGATATTGTGAGAACTATTGTATTTGCCTAAAGAATACAAACCAAGTGTGCTTTTTTCATCTTTAATTCTGTGGAACTTATTGTTATAAATGAACTTGACAAGGCCCCGTCTACGTCCTCAACATGATTAGCTGTGTAAAGTTTGTCTG

mRNA sequence

GGTTTGACCATTAAATAAATAAATAAATAACAAAACTTAATGAAAACACAAACACACATACTCTTTGTATTTGCAAGATAAAGGATGGGGAGATATTATTATTCTCTCTCAGTCTCACTCCCAATTATGAACCAATAAACAAGCAGTCCCCAAATTTAAAAATTGGGTCTTTCTCATCTCCATCTTCTTGATGTTGATGTCTTTTACAGATTGAATTTCAATCAAGAAACAAAGGAAGAAAGAAGAAGAAGAATCTAAGAAACAGTTAGTTGGGTTTTTTTTTTTTTTTTTTAGCGTTTTGGATTAGCTCTCCACGTTGCCATTTCAAATTGGGCGGGCCACTCTGAGCTTCTCCTCTCTTCAACAATGGTGTGTGGCCAACCGCCATTCCCTCTCTTTGCTTTAAATATCTGTCTTTGAGGGCCACTCCCCCCGACACCTCCTTCAATCTTGCTAGTTGGATTTGGTGGCCAACCATTTACCTTCTTCAGAAAAACTACTTTCTTTTGTTTCTTTCTCTTATCCATTTTGAAAACCCCTTGTGGGGTTTTGTTTATATCTCTCTATTTTGAATCTTGCAGGAGTATCTGGGTATGGGGGTTTGGAATTACTGATTATGACAGAAGAAGATTTGCGGTTCATTCAACTGTTGTAAGGAAAAAATAAAAAAAAGAGAACGATACGGTTGATTATTGATTATTTCTTCTTCTCTATTTGGTCTTTTTTGTTTTATTTTTTATTTTTTTGAAGTTTGGCCAACGCCTTTAGCGCATTTCTAAACCGTTCGATTGTTGATTTCATCTGAGTTTCTCTGTTTTATTTTTTTATTTTTTCATTTTTCTTGAGTTTCTGGCCACCCTCTGCGACCCAACATCAACTTCCTGTCTTCTTTTTTTCAACCGTTTTTTGTTGCCTTCTTCTTGCTCTTTATGCCTTTATATACGCCCTGATTCCAATTTTTTGTTTGTTATGAGATACCCTTTTAAAGCTTCTCTCTGAATTGGCAGTTTTGGGCCTGCACGATAGGTGTTTGATGTTTTGCTTCACTGAATACCTTATAGTTTGGGACATGAGACTTTCATGAATTTGGATCGTTTGCTTTTGTCCCAAAACGGGTTCCGTTTCTCTTTTAATCATTACGGGCAAAACTTATGTGATTTTTGTTGTCTTCGTGCTTGGACTTGCCCTTTCGTTTTAGTTATCCTTCCATGAGAACCATCCCCTTTTCTTTCTTCATATTTCCAACTTTCTCCATGTCCGTGTAGTTTGTTGTCTTGTTCTTGATAAGGAACCTGGTTGGTTTTAGTTGGAAAAGGTCATTTTGCAATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCATTTAATTCTGATGCTACTACGTCTTTCATATCAATTTCGGTGTCTGGAGAAGATGGCGCTATGGCTGATGATATCAGAAACGAAGCATCTGATTCTGTCCCTCCTTCCTTTTGGGTTAAAATGGCGATGAAAATATCTAGAGCTAGATGGTTTATATTTTTGAGAAGAGTTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCTAATCCTTTCAATTCGGGTTTGTGGATGGCGATGGAACTTGTAGCTCTGTTGTTTCAGCTAATTATCTCAGTGTTTACTCTTGCCATTTCACAGGCTGAAAAGCCAGTTTGGCCTATGAGGTTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAATGCAGGGAAATGATAACCGTCTTTCAGATATTGAACATGAACAGCAGAGGAGCAATGAATCATCAAGGTATTCACATTTGATGAACAGATGCCGCACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGATTCTCGCTTAGCCTCATTCCAGAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTACAGGGTATAACATTAACATGGGATCATCCGAAAAAGGGGCATCAGATGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCGGTCGAAGCCAACATCAACCCCAGAAGTCAACCTGACAATAGCAATACAGGACTTCTAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAGAGAGCCAAGAAATTAGTAGAAGCAGTTCAAGTGCTTCATTGGGTTTTTTTTCTCTTCTTTTTCCCTTCCAAATGGAAATTTTCTCATTTTCACTGTTTTTATGGTTTAGTCCGTAGATTAGAGTCTCACATGGTTACTTGAGTGAGTTCTAGAGCTCACCAGTTACCTAATTATACTCAAATACTTAAGGTTACATGTAGCAGGAAAATGATGCCTTATTTGTAGATATTGTGAGAACTATTGTATTTGCCTAAAGAATACAAACCAAGTGTGCTTTTTTCATCTTTAATTCTGTGGAACTTATTGTTATAAATGAACTTGACAAGGCCCCGTCTACGTCCTCAACATGATTAGCTGTGTAAAGTTTGTCTG

Coding sequence (CDS)

ATGATTCATTCTGGTTTCTTCCTTTCGGGACCATCATTTAATTCTGATGCTACTACGTCTTTCATATCAATTTCGGTGTCTGGAGAAGATGGCGCTATGGCTGATGATATCAGAAACGAAGCATCTGATTCTGTCCCTCCTTCCTTTTGGGTTAAAATGGCGATGAAAATATCTAGAGCTAGATGGTTTATATTTTTGAGAAGAGTTTTCCACTACCAAAACGGATCGAGATCTGATCTTGGGCCTAATCCTTTCAATTCGGGTTTGTGGATGGCGATGGAACTTGTAGCTCTGTTGTTTCAGCTAATTATCTCAGTGTTTACTCTTGCCATTTCACAGGCTGAAAAGCCAGTTTGGCCTATGAGGTTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGCTTCTCTATGGCCGCCATCGGTATCATTATCTAATGCAGGGAAATGATAACCGTCTTTCAGATATTGAACATGAACAGCAGAGGAGCAATGAATCATCAAGGTATTCACATTTGATGAACAGATGCCGCACGTCTCTCGATCTTTTCTTTGCAATATGGTTTGTAATGGGAAATCTTTGGGTCTTCGATTCTCGCTTAGCCTCATTCCAGAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGCCATCTGCTACTCTTTCCCATTTATTCTGTTTCTGCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTACAGGGTATAACATTAACATGGGATCATCCGAAAAAGGGGCATCAGATGATCAAATTTCCCAGCTACCTTGCTGGAGATACAAAGCGGTCGAAGCCAACATCAACCCCAGAAGTCAACCTGACAATAGCAATACAGGACTTCTAAAAGAGGATCCAGAATGTTGCATTTGCCTTGCCAAGTATATAGACAAGGAAGAAGTGAGACAATTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTACATCTTCATGCCCTCTCTGTAAGCAACAACTTCAAAGATAG

Protein sequence

MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR
Homology
[Close]
BLAST of Cmc01g0013471 vs. NCBI nr
Match: XP_008463025.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo])

HSP 1 Score: 716.1 bits (1847), Expect = 1.5e-202
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cmc01g0013471 vs. NCBI nr
Match: KAA0048251.1 (E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK08006.1 E3 ubiquitin-protein ligase [Cucumis melo var. makuwa])

HSP 1 Score: 694.9 bits (1792), Expect = 3.6e-196
Identity = 346/382 (90.58%), Postives = 346/382 (90.58%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLS IEHEQQRSNESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSYIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDP- 300
           VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDP 
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPV 300

Query: 301 ----------------------------------ECCICLAKYIDKEEVRQLPCSHVFHL 348
                                             ECCICLAKYIDKEEVRQLPCSHVFHL
Sbjct: 301 SNNSLPGFEKTTEENSNKKSDGGLKYFRLPPILQECCICLAKYIDKEEVRQLPCSHVFHL 360

[Close]
BLAST of Cmc01g0013471 vs. NCBI nr
Match: XP_011659087.1 (E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis sativus])

HSP 1 Score: 688.0 bits (1774), Expect = 4.3e-194
Identity = 334/347 (96.25%), Postives = 338/347 (97.41%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVS EDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSG WMAMELVALLFQLIIS FTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ + N LSDIEHEQQR+NESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLW FDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VPLISSLTGYNIN GS+EKGASDDQISQLPCWRYKAVEANINPRSQ DNSNTGLLKEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           CCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cmc01g0013471 vs. NCBI nr
Match: XP_038899145.1 (E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida])

HSP 1 Score: 671.0 bits (1730), Expect = 5.5e-189
Identity = 322/346 (93.06%), Postives = 330/346 (95.38%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSD TTSFISI VSGEDGA AD+I N  SDS+PPSFWV+MAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDVTTSFISIPVSGEDGARADEISNHTSDSIPPSFWVRMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRR+FHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIIS FTLAISQAE+PVWP
Sbjct: 61  RWFIFLRRIFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISAFTLAISQAERPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYL QG+ N LSDIEHEQQRSNESSRYSHLMN+CR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLTQGDGNSLSDIEHEQQRSNESSRYSHLMNKCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VPL SSL GYNINMGS+EKGA DDQISQLPCWRYKAVE NINP SQPDNSNTGL KEDPE
Sbjct: 241 VPLTSSLIGYNINMGSTEKGALDDQISQLPCWRYKAVETNINPGSQPDNSNTGLPKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQ 347
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQ
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQ 346

[Close]
BLAST of Cmc01g0013471 vs. NCBI nr
Match: XP_008463026.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo] >XP_008463027.1 PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo])

HSP 1 Score: 656.8 bits (1693), Expect = 1.1e-184
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 33  MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA 92
           MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA
Sbjct: 1   MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA 60

Query: 93  MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN 152
           MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN
Sbjct: 61  MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN 120

Query: 153 DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL 212
           DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL
Sbjct: 121 DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL 180

Query: 213 HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW 272
           HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW
Sbjct: 181 HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW 240

Query: 273 RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL 332
           RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL
Sbjct: 241 RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL 300

Query: 333 AITSSCPLCKQQLQR 348
           AITSSCPLCKQQLQR
Sbjct: 301 AITSSCPLCKQQLQR 315

[Close]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match: Q93Z92 (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 4.3e-27
Identity = 79/262 (30.15%), Postives = 126/262 (48.09%), Query Frame = 0 

Query: 104 ISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLL----YGRHRYHYLMQGNDNRLSDI 163
           I V  L +S+ EKP  P+R+W+ GY + C L +  +      R R  +   G  + L++ 
Sbjct: 123 IGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNS 182

Query: 164 EHEQQRS----NESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLL 223
             +Q  S     +    S+      ++  +F  IW+++G  WV          +P+L+ L
Sbjct: 183 SSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWL 242

Query: 224 CSFLLVWN----AICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPC 283
           C   L ++      C +   ++ L +CCC+P I ++    +   + ++GAS + I Q+P 
Sbjct: 243 CIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAI----LYAVADQEGASKNDIDQMPK 302

Query: 284 WRYKAVEANINPRSQPDNS-----------NTGLLKEDPECCICLAKYIDKEEVRQLPCS 343
           +R+     N+   S                   L  ED ECCICL +Y D  E+R+LPC+
Sbjct: 303 FRFTKT-GNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCN 362

[Close]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match: Q9LN71 (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.8e-26
Identity = 80/301 (26.58%), Postives = 143/301 (47.51%), Query Frame = 0 

Query: 91  MAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ 150
           + +++V  L  + ++   L +S+ E P+ P+R+W+ GY L CVL ++ +   +R     +
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160

Query: 151 GN---------------DNRLSDIEHEQQRSNESS------------RYSHLMNRCRTSL 210
            N                +  S +E E   S  +S              S +     ++ 
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSSVAKHLESAN 220

Query: 211 DLFFAIWFVMGNLWVFDSRLASFQRAPKLHLL----CSFLLVWNAICYSFPFILFLLLCC 270
            +F  IW+++G  WV        Q +P+++ L      F + +   C +   ++ + +CC
Sbjct: 221 TMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCC 280

Query: 271 CVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAV-EANINPRSQPDNSNTG----- 330
           C+P I ++    +   + ++GAS + I QL  ++++ + +AN +   +   +  G     
Sbjct: 281 CLPCIIAV----LYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTTEGIMTEC 340

Query: 331 ---------LLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQ 346
                    LL+ED ECCICL+ Y D  E+R+LPC H FH  CVDKWL I ++CPLCK  
Sbjct: 341 GTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCKYN 397

[Close]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match: Q8LDB8 (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 1.4e-25
Identity = 80/302 (26.49%), Postives = 141/302 (46.69%), Query Frame = 0 

Query: 91  MAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ 150
           + ++ V  L  ++++   L +S  E P  P+R+WI GY L C++ ++ +   +R     +
Sbjct: 75  VVLDFVWNLAFVVVATAVLVLSSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRR 134

Query: 151 GND----------NRLSDIEHEQ----------------QRSNESSRYSHLMNRCRTSLD 210
             D          +  S ++ E+                Q  NE++ ++  +    T + 
Sbjct: 135 RRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMIS 194

Query: 211 LFFAIWFVMGNLWVFDSRLASFQRAPKLHLLC----SFLLVWNAICYSFPFILFLLLCCC 270
               IW+V+G  WV        Q +P+L+ LC     F + +   C +   ++ + +CCC
Sbjct: 195 F---IWWVIGFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCC 254

Query: 271 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANI-----NPRSQPDNSNT--- 330
           +P I ++    +   + ++GAS + I QL  ++++ V   +       + Q D+      
Sbjct: 255 LPCIIAV----LYAVAEQEGASKEDIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTE 314

Query: 331 ---------GLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQ 346
                     L  ED ECCICL+ Y D+ E+R+LPC H FH  CVDKWL I ++CPLCK 
Sbjct: 315 CGTDSPVEHALPHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCKY 369

[Close]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match: Q8GUU2 (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-25
Identity = 80/285 (28.07%), Postives = 133/285 (46.67%), Query Frame = 0 

Query: 89  LWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYL 148
           LW A  ++A    L+ +V        E+P  P+R+WI  Y L C+  ++L++      Y 
Sbjct: 83  LWNAALVLASAVMLVGTV-------EERPNEPIRVWICVYGLQCLFHVVLVWS----EYW 142

Query: 149 MQGNDNRLSDIE------------HEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNL 208
            + +  R  D+E            +EQ   + S+ YS  + RC +   +   IW+++G  
Sbjct: 143 RRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYS-FVKRCESINTVISFIWWIIGFY 202

Query: 209 WVFDSRLASFQRAPKLHLLCSFLLV----WNAICYSFPFILFLLLCCCVPLISSLTGYNI 268
           WV +        AP L+ L    L     +   C     ++ + LCCC+P I +L    +
Sbjct: 203 WVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIAL----L 262

Query: 269 NMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDN------------SNTGLLKEDPE 328
              +  +G S+ ++  LP +++KA  +N    + P              +   LL ED +
Sbjct: 263 YAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDAD 322

Query: 329 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQL 346
           CCICL+ Y D  E+  LPC+H FH  C+ KWL + ++CPLCK  +
Sbjct: 323 CCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351

[Close]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match: Q9FL07 (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.6e-11
Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 0 

Query: 257 SEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQ 316
           ++ G     I  LP + YK +       S       G  +E  +C +CL ++ +K+++R 
Sbjct: 104 NDSGLDQAFIDALPVFHYKEIVG-----SAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRL 163

Query: 317 LP-CSHVFHLKCVDKWLAITSSCPLCKQQL 346
           LP CSH FHL C+D WL   S+CPLC+  L
Sbjct: 164 LPMCSHAFHLNCIDTWLQSNSTCPLCRGTL 188

[Close]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match: A0A1S3CI94 (E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 7.2e-203
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match: A0A5D3CCB0 (E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001490 PE=4 SV=1)

HSP 1 Score: 694.9 bits (1792), Expect = 1.7e-196
Identity = 346/382 (90.58%), Postives = 346/382 (90.58%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLS IEHEQQRSNESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSYIEHEQQRSNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDP- 300
           VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDP 
Sbjct: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPV 300

Query: 301 ----------------------------------ECCICLAKYIDKEEVRQLPCSHVFHL 348
                                             ECCICLAKYIDKEEVRQLPCSHVFHL
Sbjct: 301 SNNSLPGFEKTTEENSNKKSDGGLKYFRLPPILQECCICLAKYIDKEEVRQLPCSHVFHL 360

[Close]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match: A0A0A0K4H0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 2.1e-194
Identity = 334/347 (96.25%), Postives = 338/347 (97.41%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFLSGPSFNSDATTSFISISVS EDGAMADDIRNEASDSVPPSFWVKMAMKISRA
Sbjct: 1   MIHSGFFLSGPSFNSDATTSFISISVSEEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSG WMAMELVALLFQLIIS FTLAISQAEKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFTLAISQAEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQ + N LSDIEHEQQR+NESSRYSHLMNRCR
Sbjct: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNESSRYSHLMNRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           TSLDLFFAIWFVMGNLW FDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC
Sbjct: 181 TSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VPLISSLTGYNIN GS+EKGASDDQISQLPCWRYKAVEANINPRSQ DNSNTGLLKEDPE
Sbjct: 241 VPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLDNSNTGLLKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           CCICLAKYIDKEEVRQLPCSHVFHL+CVDKWLAITSSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 347

[Close]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match: A0A1S3CIA1 (E3 ubiquitin-protein ligase At4g11680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1)

HSP 1 Score: 656.8 bits (1693), Expect = 5.2e-185
Identity = 315/315 (100.00%), Postives = 315/315 (100.00%), Query Frame = 0 

Query: 33  MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA 92
           MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA
Sbjct: 1   MADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMA 60

Query: 93  MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN 152
           MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN
Sbjct: 61  MELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGN 120

Query: 153 DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL 212
           DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL
Sbjct: 121 DNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWVFDSRLASFQRAPKL 180

Query: 213 HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW 272
           HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW
Sbjct: 181 HLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCW 240

Query: 273 RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL 332
           RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL
Sbjct: 241 RYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWL 300

Query: 333 AITSSCPLCKQQLQR 348
           AITSSCPLCKQQLQR
Sbjct: 301 AITSSCPLCKQQLQR 315

[Close]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match: A0A6J1FHW3 (E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC111445910 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.3e-175
Identity = 300/347 (86.46%), Postives = 317/347 (91.35%), Query Frame = 0 

Query: 1   MIHSGFFLSGPSFNSDATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRA 60
           MIHSGFFL+GPSFNSDATTSFIS +VSGEDGA ADD RN+ S S+PPSFWV+ AM++SRA
Sbjct: 1   MIHSGFFLAGPSFNSDATTSFISSTVSGEDGATADDTRNDTSGSLPPSFWVRTAMRVSRA 60

Query: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWP 120
           RWFIFLRRVFHYQNGSRSDLGPNPFNSG WMAMELVALLFQLIISVFTLAISQ EKPVWP
Sbjct: 61  RWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISVFTLAISQTEKPVWP 120

Query: 121 MRLWIGGYDLGCVLSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCR 180
           MRLWI GYDLGCVLSLLLL GRHR  YLMQG+ N LSDIEH  Q SNESSRYSHL+NRCR
Sbjct: 121 MRLWIAGYDLGCVLSLLLLCGRHRCRYLMQGDSNSLSDIEH--QSSNESSRYSHLINRCR 180

Query: 181 TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCC 240
           T LDLFFAIWFVMGNLW+FDSR ASFQ APKLHLLCSF+LVWNAICYSFPF LFLLLCCC
Sbjct: 181 TFLDLFFAIWFVMGNLWIFDSRFASFQGAPKLHLLCSFVLVWNAICYSFPFFLFLLLCCC 240

Query: 241 VPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPE 300
           VP+ISSL GYNINMGS+EKGA DDQISQLPCW+YK V+ NIN   QPDNSNTGL KEDPE
Sbjct: 241 VPVISSLIGYNINMGSTEKGALDDQISQLPCWKYKVVDVNINLGIQPDNSNTGLPKEDPE 300

Query: 301 CCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           CCICLAKYIDKE+VRQLPCSHVFHL+CVDKWLAI SSCPLCKQQLQR
Sbjct: 301 CCICLAKYIDKEDVRQLPCSHVFHLRCVDKWLAIASSCPLCKQQLQR 345

[Close]
BLAST of Cmc01g0013471 vs. TAIR 10
Match: AT5G55970.1 (RING/U-box superfamily protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-121
Identity = 209/331 (63.14%), Postives = 257/331 (77.64%), Query Frame = 0 

Query: 17  ATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGS 76
           ++++ +S S  G++  +A     E S   P SF++++AMK+SRARWFIFLRRVFHYQNGS
Sbjct: 21  SSSALLSSSPRGDNSHVAAANGQERS---PSSFYIRLAMKVSRARWFIFLRRVFHYQNGS 80

Query: 77  RSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSL 136
           RSDLG NPFNS  WM  EL+ALL QL +  FTLAIS+ E+P+WP+RLWI GYD+GC+L+L
Sbjct: 81  RSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNL 140

Query: 137 LLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNL 196
           +LLYGR+R   + QGN   L D+E +QQR  E +R SHLMN+CRTSL+LFFAIWFV+GN+
Sbjct: 141 MLLYGRYRQLDINQGNGFVLGDVE-QQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNV 200

Query: 197 WVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGS 256
           WVFDSR  SF  APKLH+LC  LL WNAICYSFPF+LFL LCC VPLISSL GYN+NMGS
Sbjct: 201 WVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVPLISSLLGYNMNMGS 260

Query: 257 SEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQ 316
           S++ ASDDQIS LP W++K     I+  +   +S++  + +DPECCICLAKY DKEEVR+
Sbjct: 261 SDRAASDDQISSLPSWKFK----RIDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRK 320

Query: 317 LPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           LPCSH FH KCVD+WL I S CPLCKQ L R
Sbjct: 321 LPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343

[Close]
BLAST of Cmc01g0013471 vs. TAIR 10
Match: AT5G55970.2 (RING/U-box superfamily protein )

HSP 1 Score: 433.7 bits (1114), Expect = 1.4e-121
Identity = 209/331 (63.14%), Postives = 257/331 (77.64%), Query Frame = 0 

Query: 17  ATTSFISISVSGEDGAMADDIRNEASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGS 76
           ++++ +S S  G++  +A     E S   P SF++++AMK+SRARWFIFLRRVFHYQNGS
Sbjct: 21  SSSALLSSSPRGDNSHVAAANGQERS---PSSFYIRLAMKVSRARWFIFLRRVFHYQNGS 80

Query: 77  RSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSL 136
           RSDLG NPFNS  WM  EL+ALL QL +  FTLAIS+ E+P+WP+RLWI GYD+GC+L+L
Sbjct: 81  RSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIWPVRLWITGYDVGCLLNL 140

Query: 137 LLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVMGNL 196
           +LLYGR+R   + QGN   L D+E +QQR  E +R SHLMN+CRTSL+LFFAIWFV+GN+
Sbjct: 141 MLLYGRYRQLDINQGNGFVLGDVE-QQQRGREETRSSHLMNKCRTSLELFFAIWFVIGNV 200

Query: 197 WVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNINMGS 256
           WVFDSR  SF  APKLH+LC  LL WNAICYSFPF+LFL LCC VPLISSL GYN+NMGS
Sbjct: 201 WVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCCLVPLISSLLGYNMNMGS 260

Query: 257 SEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEEVRQ 316
           S++ ASDDQIS LP W++K     I+  +   +S++  + +DPECCICLAKY DKEEVR+
Sbjct: 261 SDRAASDDQISSLPSWKFK----RIDDSASDSDSDSATVTDDPECCICLAKYKDKEEVRK 320

Query: 317 LPCSHVFHLKCVDKWLAITSSCPLCKQQLQR 348
           LPCSH FH KCVD+WL I S CPLCKQ L R
Sbjct: 321 LPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343

[Close]
BLAST of Cmc01g0013471 vs. TAIR 10
Match: AT4G26580.1 (RING/U-box superfamily protein )

HSP 1 Score: 414.8 bits (1065), Expect = 6.6e-116
Identity = 202/332 (60.84%), Postives = 245/332 (73.80%), Query Frame = 0 

Query: 15  SDATTSFISISVSGEDGAMADDIRNEASDSVP-PSFWVKMAMKISRARWFIFLRRVFHYQ 74
           S A  S    S S       DD  + A +S P  SF++++AM++SRARWFIFLRRVFHYQ
Sbjct: 11  SSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQ 70

Query: 75  NGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCV 134
           N SRSDLG NPFNS  WM  EL+ALL Q+ +   TLA+S+ E+PVWPMRLWI GY++GC+
Sbjct: 71  NASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCL 130

Query: 135 LSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVM 194
           L+L+LLYGR+R       N     DIE +Q+   E++R SHLMN+CRTSL+LFFAIWFV+
Sbjct: 131 LNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVI 190

Query: 195 GNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNIN 254
           GN+WVFDSR  SF  AP LH+LC  LL WNA+CYSFPF+LFLLLCC VPL+SS  GYN+N
Sbjct: 191 GNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMN 250

Query: 255 MGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEE 314
           +GSSEKGASDDQIS LP W+YK ++         + S++     DPECCICLAKY +KEE
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLID---------ETSDSSQANNDPECCICLAKYKEKEE 310

Query: 315 VRQLPCSHVFHLKCVDKWLAITSSCPLCKQQL 346
           VR+LPCSH FHLKCVD+WL I S CPLCKQ L
Sbjct: 311 VRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333

[Close]
BLAST of Cmc01g0013471 vs. TAIR 10
Match: AT4G26580.2 (RING/U-box superfamily protein )

HSP 1 Score: 414.8 bits (1065), Expect = 6.6e-116
Identity = 202/332 (60.84%), Postives = 245/332 (73.80%), Query Frame = 0 

Query: 15  SDATTSFISISVSGEDGAMADDIRNEASDSVP-PSFWVKMAMKISRARWFIFLRRVFHYQ 74
           S A  S    S S       DD  + A +S P  SF++++AM++SRARWFIFLRRVFHYQ
Sbjct: 11  SSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWFIFLRRVFHYQ 70

Query: 75  NGSRSDLGPNPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCV 134
           N SRSDLG NPFNS  WM  EL+ALL Q+ +   TLA+S+ E+PVWPMRLWI GY++GC+
Sbjct: 71  NASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCL 130

Query: 135 LSLLLLYGRHRYHYLMQGNDNRLSDIEHEQQRSNESSRYSHLMNRCRTSLDLFFAIWFVM 194
           L+L+LLYGR+R       N     DIE +Q+   E++R SHLMN+CRTSL+LFFAIWFV+
Sbjct: 131 LNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSLELFFAIWFVI 190

Query: 195 GNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFILFLLLCCCVPLISSLTGYNIN 254
           GN+WVFDSR  SF  AP LH+LC  LL WNA+CYSFPF+LFLLLCC VPL+SS  GYN+N
Sbjct: 191 GNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPLVSSFLGYNMN 250

Query: 255 MGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNTGLLKEDPECCICLAKYIDKEE 314
           +GSSEKGASDDQIS LP W+YK ++         + S++     DPECCICLAKY +KEE
Sbjct: 251 VGSSEKGASDDQISSLPSWKYKLID---------ETSDSSQANNDPECCICLAKYKEKEE 310

Query: 315 VRQLPCSHVFHLKCVDKWLAITSSCPLCKQQL 346
           VR+LPCSH FHLKCVD+WL I S CPLCKQ L
Sbjct: 311 VRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333

[Close]
BLAST of Cmc01g0013471 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 194.1 bits (492), Expect = 1.8e-49
Identity = 110/305 (36.07%), Postives = 166/305 (54.43%), Query Frame = 0 

Query: 83  NPFNSGLWMAMELVALLFQLIISVFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGR 142
           +P NSGLW+++EL   + Q+I ++  L++S+ E P  P+  WI GY  GCV +L LLY R
Sbjct: 105 SPLNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWR 164

Query: 143 HRYHYLMQGND-------------------NRLSDIEHEQQR--SNESSRYSHLMNRCR- 202
           + +       D                   +R S+ +  Q    S+  SRY   ++  R 
Sbjct: 165 YYHSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARL 224

Query: 203 --------TSLDLFFAIWFVMGNLWVFDSRLASFQRAPKLHLLCSFLLVWNAICYSFPFI 262
                    +LD FFA+WFV+GN+W+F    +S   AP L+ LC   L ++ I Y+ PFI
Sbjct: 225 KVIVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFI 284

Query: 263 LFLLLCCCVPLISSLTGYNINMGSSEKGASDDQISQLPCWRYKAVEANINPRSQPDNSNT 322
           L   +CCC+P I S+ GY  ++ +  +GA+ + I+ LP  ++K  ++  N      +++ 
Sbjct: 285 LCTTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSE 344

Query: 323 G------------LLKEDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAITSSCPL 346
           G            +  ED  CCICLAKY + EE+R+LPCSH FH +CVDKWL I +SCPL
Sbjct: 345 GGVVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPL 404

The following BLAST results are available for this feature:
BLAST of Cmc01g0013471 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463025.11.5e-202100.00PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo][more]
KAA0048251.13.6e-19690.58E3 ubiquitin-protein ligase [Cucumis melo var. makuwa] >TYK08006.1 E3 ubiquitin-... [more]
XP_011659087.14.3e-19496.25E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis sativus][more]
XP_038899145.15.5e-18993.06E3 ubiquitin-protein ligase At4g11680-like [Benincasa hispida][more]
XP_008463026.11.1e-184100.00PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X2 [Cucumis melo] >XP_0... [more]
BLAST of Cmc01g0013471 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q93Z924.3e-2730.15E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g116... [more]
Q9LN712.8e-2626.58E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g127... [more]
Q8LDB81.4e-2526.49E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g631... [more]
Q8GUU21.8e-2528.07E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV... [more]
Q9FL075.6e-1135.56RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1[more]
BLAST of Cmc01g0013471 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CI947.2e-203100.00E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A5D3CCB01.7e-19690.58E3 ubiquitin-protein ligase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
A0A0A0K4H02.1e-19496.25RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 P... [more]
A0A1S3CIA15.2e-185100.00E3 ubiquitin-protein ligase At4g11680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1... [more]
A0A6J1FHW38.3e-17586.46E3 ubiquitin-protein ligase At1g63170-like OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of Cmc01g0013471 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55970.11.4e-12163.14RING/U-box superfamily protein [more]
AT5G55970.21.4e-12163.14RING/U-box superfamily protein [more]
AT4G26580.16.6e-11660.84RING/U-box superfamily protein [more]
AT4G26580.26.6e-11660.84RING/U-box superfamily protein [more]
AT4G32600.11.8e-4936.07RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 301..341
e-value: 6.4E-7
score: 39.0
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 300..342
e-value: 5.2E-13
score: 49.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 301..342
score: 12.563043
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 249..346
e-value: 3.2E-20
score: 73.6
NoneNo IPR availablePANTHERPTHR46225C3H4 TYPE ZINC FINGER PROTEINcoord: 28..346
NoneNo IPR availablePANTHERPTHR46225:SF1RING/U-BOX SUPERFAMILY PROTEINcoord: 28..346
NoneNo IPR availableCDDcd16474RING-H2_RNF111_likecoord: 299..342
e-value: 7.78896E-19
score: 76.9665
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 294..345

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0013471.1Cmc01g0013471.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane
molecular_function GO:0008270 zinc ion binding