Homology
BLAST of Cmc01g0013341 vs. NCBI nr
Match:
TYK08028.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 514.2 bits (1323), Expect = 7.0e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0
Query: 12 EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
+++K L+ +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 216 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 275
Query: 72 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 276 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 335
Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 336 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 395
Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
VGYCDADWAGSTDDRK +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 396 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 455
Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 456 AIDISKNPVQYSRTKHIDIRHHFIRELVED 481
BLAST of Cmc01g0013341 vs. NCBI nr
Match:
KAA0048226.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 514.2 bits (1323), Expect = 7.0e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0
Query: 12 EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
+++K L+ +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 35 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 94
Query: 72 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 95 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 154
Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 155 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 214
Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
VGYCDADWAGSTDDRK +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 215 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 274
Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 275 AIDISKNPVQYSRTKHIDIRHHFIRELVED 300
BLAST of Cmc01g0013341 vs. NCBI nr
Match:
KAA0066405.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 498.0 bits (1281), Expect = 5.2e-137
Identity = 245/281 (87.19%), Postives = 256/281 (91.10%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGFPQDLVNNFIN MQSEFKMS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GELSCFLGLQIKQ ND IFISQEKY RNMVKKFGLEQARNKRTPA THVKL KDT A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSI+GSLLYLTASRPDIAY +GICARYQ DP ITHL VK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
MMYSYDTT TLVGYCDADW GS DDRK+ SEVEAEYI AGSGCTQLIW KNMLLEYG DQ
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNTSEVEAEYIAAGSGCTQLIWTKNMLLEYGFDQ 295
Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
DTMTLYC NMSAIDIS NPVQ+SRT+HIDIRHHFI ELV+D
Sbjct: 296 DTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIPELVKD 335
BLAST of Cmc01g0013341 vs. NCBI nr
Match:
KAA0066740.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 488.4 bits (1256), Expect = 4.1e-134
Identity = 242/281 (86.12%), Postives = 256/281 (91.10%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFPQDLVNNFIN MQSEF+MS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GEL CFLGLQI+QKND IFISQ+KYARN+VKKFGLEQARNKRTPA THVKL KD GA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSIVGSLLYLTASRPDIAYAMGI ARYQ P ITHLE +KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
MMYSYDTT TLVGYCDADWAGSTDDRK +EAEYI AGSGCTQLIW KN+L EYG DQ
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWMKNVLHEYGFDQ 295
Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
DTMTLYC+NMSAIDISKN VQ+SRTKHIDIRHHFIRE VE+
Sbjct: 296 DTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 332
BLAST of Cmc01g0013341 vs. NCBI nr
Match:
TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 478.8 bits (1231), Expect = 3.2e-131
Identity = 240/305 (78.69%), Postives = 256/305 (83.93%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFP DLVNNFIN MQSEF+MS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GELSCFLG QIKQKND I ISQ+KYA+NM KKFGLEQARNKRTPAATHVKL +D GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSIV +LLYLTASRPDIAYA+GICARYQADP I+HLE VKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSR------------------------SEVEAEY 240
MMYSYDTT TLVGYCDADWAG DDRKS S EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295
Query: 241 IVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 282
IVAGSGCTQLIW +N+L EYG DQ T+TLY NMSAIDISKNPVQ+SR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355
BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42
Identity = 105/314 (33.44%), Postives = 169/314 (53.82%), Query Frame = 0
Query: 2 YLRGRGYSRGEIDKTLFIHRKSD-QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 61
+++ + Y + D ++ R S+ ++ +YVDD++ G + L+ ++ F M
Sbjct: 977 FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036
Query: 62 MIGELSCFLGLQIKQKNDG--IFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTG 121
+G LG++I ++ +++SQEKY ++++F ++ A+ TP A H+KL K
Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096
Query: 122 GAEVDHK------LYRSIVGSLLY-LTASRPDIAYAMGICARYQADPHITHLEVVKRILK 181
V+ K Y S VGSL+Y + +RPDIA+A+G+ +R+ +P H E VK IL+
Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1156
Query: 182 YVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSR---------------------- 241
Y+ GT+ + + + L GY DAD AG D+RKS
Sbjct: 1157 YLRGTTGDCLCFG-GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1216
Query: 242 --SEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKH 282
S EAEYI A ++IW K L E G+ Q +YC + SAID+SKN + ++RTKH
Sbjct: 1217 ALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKH 1276
BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 1.0e-39
Identity = 100/304 (32.89%), Postives = 154/304 (50.66%), Query Frame = 0
Query: 2 YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSM 61
YL G+ D +LF+ ++ ++ +YVDDI+ G L++N ++N+ F +
Sbjct: 1120 YLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKD 1179
Query: 62 IGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAE 121
EL FLG++ K+ G+ +SQ +Y +++ + + A+ TP A KL +G
Sbjct: 1180 HEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKL 1239
Query: 122 VDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGM 181
D YR IVGSL YL +RPDI+YA+ +++ P HL+ +KRIL+Y+ GT + G+
Sbjct: 1240 TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1299
Query: 182 MYSYDTTSTLVGYCDADWAGSTDDRKS------------------------RSEVEAEYI 241
T +L Y DADWAG DD S RS EAEY
Sbjct: 1300 FLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1359
Query: 242 VAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 281
+ +++ W ++L E G+ +YC N+ A + NPV +SR KHI I +HFIR
Sbjct: 1360 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIR 1419
BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 98/304 (32.24%), Postives = 152/304 (50.00%), Query Frame = 0
Query: 2 YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSM 61
YL G+ D +LF+ ++ ++ +YVDDI+ G L+ + ++ + F +
Sbjct: 1103 YLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKE 1162
Query: 62 IGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAE 121
+L FLG++ K+ G+ +SQ +Y +++ + + A+ TP AT KL +G
Sbjct: 1163 HEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1222
Query: 122 VDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGM 181
D YR IVGSL YL +RPD++YA+ ++Y P H +KR+L+Y+ GT D G+
Sbjct: 1223 PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGI 1282
Query: 182 MYSYDTTSTLVGYCDADWAGSTDDRKS------------------------RSEVEAEYI 241
T +L Y DADWAG TDD S RS EAEY
Sbjct: 1283 FLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1342
Query: 242 VAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 281
+ ++L W ++L E G+ +YC N+ A + NPV +SR KHI + +HFIR
Sbjct: 1343 SVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIR 1402
BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 143.3 bits (360), Expect = 4.2e-33
Identity = 84/306 (27.45%), Postives = 157/306 (51.31%), Query Frame = 0
Query: 8 YSRGEIDKTLFIHRKS--DQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGEL 67
+ +D+ ++I K ++ + +YVDD++ +NNF + +F+M+ + E+
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120
Query: 68 SCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVD-H 127
F+G++I+ + D I++SQ Y + ++ KF +E TP + K+ + ++ D +
Sbjct: 1121 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPS--KINYELLNSDEDCN 1180
Query: 128 KLYRSIVGSLLY-LTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMY 187
RS++G L+Y + +RPD+ A+ I +RY + + + +KR+L+Y+ GT D +++
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240
Query: 188 SYDTT--STLVGYCDADWAGSTDDRKS-------------------------RSEVEAEY 247
+ + ++GY D+DWAGS DRKS S EAEY
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1300
Query: 248 IVAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFI 282
+ + +W K +L + ++ + +Y N I I+ NP + R KHIDI++HF
Sbjct: 1301 MALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFA 1360
BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match:
P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)
HSP 1 Score: 124.4 bits (311), Expect = 2.0e-27
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 0
Query: 31 IYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGLQIKQKNDGIFISQEKYARN 90
+YVDDI+ G L+N I + S F M +G + FLG+QIK G+F+SQ KYA
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 91 MVKKFGLEQARNKRTPAATHVKLRKDTGGAEV-DHKLYRSIVGSLLYLTASRPDIAYAMG 150
++ G+ + TP +KL A+ D +RSIVG+L YLT +RPDI+YA+
Sbjct: 65 ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124
Query: 151 ICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKS 209
I + +P + +++KR+L+YV GT G+ ++ + +CD+DWAG T R+S
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match:
A0A5D3CA21 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001740 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 3.4e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0
Query: 12 EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
+++K L+ +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 216 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 275
Query: 72 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 276 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 335
Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 336 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 395
Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
VGYCDADWAGSTDDRK +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 396 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 455
Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 456 AIDISKNPVQYSRTKHIDIRHHFIRELVED 481
BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match:
A0A5A7U1W9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001410 PE=4 SV=1)
HSP 1 Score: 514.2 bits (1323), Expect = 3.4e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0
Query: 12 EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
+++K L+ +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 35 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 94
Query: 72 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 95 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 154
Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 155 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 214
Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
VGYCDADWAGSTDDRK +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 215 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 274
Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 275 AIDISKNPVQYSRTKHIDIRHHFIRELVED 300
BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match:
A0A5D3BPB5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00390 PE=4 SV=1)
HSP 1 Score: 498.0 bits (1281), Expect = 2.5e-137
Identity = 245/281 (87.19%), Postives = 256/281 (91.10%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGFPQDLVNNFIN MQSEFKMS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GELSCFLGLQIKQ ND IFISQEKY RNMVKKFGLEQARNKRTPA THVKL KDT A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSI+GSLLYLTASRPDIAY +GICARYQ DP ITHL VK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
MMYSYDTT TLVGYCDADW GS DDRK+ SEVEAEYI AGSGCTQLIW KNMLLEYG DQ
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNTSEVEAEYIAAGSGCTQLIWTKNMLLEYGFDQ 295
Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
DTMTLYC NMSAIDIS NPVQ+SRT+HIDIRHHFI ELV+D
Sbjct: 296 DTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIPELVKD 335
BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match:
A0A5D3DWS6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00720 PE=4 SV=1)
HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 242/281 (86.12%), Postives = 256/281 (91.10%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFPQDLVNNFIN MQSEF+MS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GEL CFLGLQI+QKND IFISQ+KYARN+VKKFGLEQARNKRTPA THVKL KD GA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSIVGSLLYLTASRPDIAYAMGI ARYQ P ITHLE +KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
MMYSYDTT TLVGYCDADWAGSTDDRK +EAEYI AGSGCTQLIW KN+L EYG DQ
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWMKNVLHEYGFDQ 295
Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
DTMTLYC+NMSAIDISKN VQ+SRTKHIDIRHHFIRE VE+
Sbjct: 296 DTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 332
BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match:
A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)
HSP 1 Score: 478.8 bits (1231), Expect = 1.6e-131
Identity = 240/305 (78.69%), Postives = 256/305 (83.93%), Query Frame = 0
Query: 1 MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
+YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFP DLVNNFIN MQSEF+MS
Sbjct: 56 VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115
Query: 61 MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
M+GELSCFLG QIKQKND I ISQ+KYA+NM KKFGLEQARNKRTPAATHVKL +D GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175
Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
EVDHKLYRSIV +LLYLTASRPDIAYA+GICARYQADP I+HLE VKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235
Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSR------------------------SEVEAEY 240
MMYSYDTT TLVGYCDADWAG DDRKS S EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295
Query: 241 IVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 282
IVAGSGCTQLIW +N+L EYG DQ T+TLY NMSAIDISKNPVQ+SR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355
BLAST of Cmc01g0013341 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 91/300 (30.33%), Postives = 139/300 (46.33%), Query Frame = 0
Query: 3 LRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMI 62
L G G+ + D T F+ + L +YVDDII V+ + ++S FK+ +
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 63 GELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEV 122
G L FLGL+I + GI I Q KYA +++ + GL + P V +GG V
Sbjct: 314 GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373
Query: 123 DHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMM 182
D K YR ++G L+YL +R DI++A+ +++ P + H + V +IL Y+ GT G+
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
Query: 183 YSYDTTSTLVGYCDADWAGSTDDRK------------------------SRSEVEAEYIV 242
YS L + DA + D R+ S+S EAEY
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
Query: 243 AGSGCTQLIWKKNMLLEYGVDQDTMT-LYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRE 278
+++W E + T L+C N +AI I+ N V + RTKHI+ H +RE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
BLAST of Cmc01g0013341 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 0
Query: 31 IYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGLQIKQKNDGIFISQEKYARN 90
+YVDDI+ G L+N I + S F M +G + FLG+QIK G+F+SQ KYA
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 91 MVKKFGLEQARNKRTPAATHVKLRKDTGGAEV-DHKLYRSIVGSLLYLTASRPDIAYAMG 150
++ G+ + TP +KL A+ D +RSIVG+L YLT +RPDI+YA+
Sbjct: 65 ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124
Query: 151 ICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKS 209
I + +P + +++KR+L+YV GT G+ ++ + +CD+DWAG T R+S
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
BLAST of Cmc01g0013341 vs. TAIR 10
Match:
ATMG00240.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 24/74 (32.43%), Postives = 42/74 (56.76%), Query Frame = 0
Query: 135 LYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGY 194
+YLT +RPD+ +A+ +++ + ++ V ++L YV GT G+ YS + L +
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 195 CDADWAGSTDDRKS 209
D+DWA D R+S
Sbjct: 61 ADSDWASCPDTRRS 74
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
TYK08028.1 | 7.0e-142 | 93.70 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0048226.1 | 7.0e-142 | 93.70 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0066405.1 | 5.2e-137 | 87.19 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [... | [more] |
KAA0066740.1 | 4.1e-134 | 86.12 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [... | [more] |
TYK23188.1 | 3.2e-131 | 78.69 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
P10978 | 1.7e-42 | 33.44 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 1.0e-39 | 32.89 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.3e-39 | 32.24 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P04146 | 4.2e-33 | 27.45 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P92519 | 2.0e-27 | 37.43 | Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CA21 | 3.4e-142 | 93.70 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G... | [more] |
A0A5A7U1W9 | 3.4e-142 | 93.70 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G0... | [more] |
A0A5D3BPB5 | 2.5e-137 | 87.19 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G... | [more] |
A0A5D3DWS6 | 2.0e-134 | 86.12 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G... | [more] |
A0A5D3DI97 | 1.6e-131 | 78.69 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 2.5e-33 | 30.33 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00810.1 | 1.4e-28 | 37.43 | DNA/RNA polymerases superfamily protein | [more] |
ATMG00240.1 | 6.3e-08 | 32.43 | Gag-Pol-related retrotransposon family protein | [more] |