Cmc01g0013341 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0013341
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
LocationCMiso1.1chr01: 9875261 .. 9876174 (-)
RNA-Seq ExpressionCmc01g0013341
SyntenyCmc01g0013341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACACAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTCCTCAAGATCTAGTAAATAATTTCATTAATAATATGCAGTCAGAATTCAAAATGAGCATGATTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGGCATTTTCATATCACAAGAAAAGTATGCCAGGAATATGGTCAAAAAATTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGACACATGTTAAACTTAGAAAAGACACTGGAGGTGCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGCCTATTATACTTAACAGCAAGTCGACCTGACATAGCTTATGCTATGGGAATATGTGCTCGTTATCAGGCGGATCCCCACATCACTCACCTAGAAGTTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACTTCCACTTTAGTTGGATATTGTGATGCTGATTGGGCAGGTTCAACTGATGATCGTAAAAGTAGGTCTGAAGGTTGCTTCTTTTTGGGAAACAATTTAATCTCTTGGTTAAGTAGCAAAACTGTGTTTCTTTATCTACAGTTGAAGCTGAATATATAGTTGCAGGTAGTGGTTGTACACAATTGATTTGGAAGAAAAACATGCTGCTTGAATATGGCGTCGATCAAGACACTATGACGTTGTATTGTCACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAATATAGTCGAACTAAGCACATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACTAA

mRNA sequence

ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACACAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTCCTCAAGATCTAGTAAATAATTTCATTAATAATATGCAGTCAGAATTCAAAATGAGCATGATTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGGCATTTTCATATCACAAGAAAAGTATGCCAGGAATATGGTCAAAAAATTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGACACATGTTAAACTTAGAAAAGACACTGGAGGTGCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGCCTATTATACTTAACAGCAAGTCGACCTGACATAGCTTATGCTATGGGAATATGTGCTCGTTATCAGGCGGATCCCCACATCACTCACCTAGAAGTTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACTTCCACTTTAGTTGGATATTGTGATGCTGATTGGGCAGGTTCAACTGATGATCGTAAAAGTAGGTCTGAAGTTGAAGCTGAATATATAGTTGCAGGTAGTGGTTGTACACAATTGATTTGGAAGAAAAACATGCTGCTTGAATATGGCGTCGATCAAGACACTATGACGTTGTATTGTCACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAATATAGTCGAACTAAGCACATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACTAA

Coding sequence (CDS)

ATGTACTTGAGAGGTAGAGGATATTCCAGAGGAGAAATTGACAAGACCTTGTTCATACACAGGAAATCTGACCAACTGTTGATGGCTCAAATTTATGTTGATGACATCATTTTTGGAGGATTTCCTCAAGATCTAGTAAATAATTTCATTAATAATATGCAGTCAGAATTCAAAATGAGCATGATTGGAGAGCTTTCATGTTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGGCATTTTCATATCACAAGAAAAGTATGCCAGGAATATGGTCAAAAAATTTGGTTTGGAACAGGCTCGAAATAAGCGGACTCCAGCTGCGACACATGTTAAACTTAGAAAAGACACTGGAGGTGCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGCCTATTATACTTAACAGCAAGTCGACCTGACATAGCTTATGCTATGGGAATATGTGCTCGTTATCAGGCGGATCCCCACATCACTCACCTAGAAGTTGTTAAACGAATTCTTAAATACGTTCATGGGACCAGTGACTTTGGAATGATGTATTCCTATGATACCACTTCCACTTTAGTTGGATATTGTGATGCTGATTGGGCAGGTTCAACTGATGATCGTAAAAGTAGGTCTGAAGTTGAAGCTGAATATATAGTTGCAGGTAGTGGTTGTACACAATTGATTTGGAAGAAAAACATGCTGCTTGAATATGGCGTCGATCAAGACACTATGACGTTGTATTGTCACAATATGAGTGCAATTGATATATCTAAGAATCCCGTTCAATATAGTCGAACTAAGCACATTGATATAAGACACCACTTTATTCGAGAACTAGTTGAAGACTAA

Protein sequence

MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED
Homology
BLAST of Cmc01g0013341 vs. NCBI nr
Match: TYK08028.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 514.2 bits (1323), Expect = 7.0e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0

Query: 12  EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
           +++K L+  +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 216 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 275

Query: 72  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
           QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 276 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 335

Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
           GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 336 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 395

Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
           VGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 396 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 455

Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 456 AIDISKNPVQYSRTKHIDIRHHFIRELVED 481

BLAST of Cmc01g0013341 vs. NCBI nr
Match: KAA0048226.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 514.2 bits (1323), Expect = 7.0e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0

Query: 12  EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
           +++K L+  +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 35  KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 94

Query: 72  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
           QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 95  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 154

Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
           GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 155 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 214

Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
           VGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 215 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 274

Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 275 AIDISKNPVQYSRTKHIDIRHHFIRELVED 300

BLAST of Cmc01g0013341 vs. NCBI nr
Match: KAA0066405.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 498.0 bits (1281), Expect = 5.2e-137
Identity = 245/281 (87.19%), Postives = 256/281 (91.10%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGFPQDLVNNFIN MQSEFKMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GELSCFLGLQIKQ ND IFISQEKY RNMVKKFGLEQARNKRTPA THVKL KDT  A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSI+GSLLYLTASRPDIAY +GICARYQ DP ITHL  VK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
           MMYSYDTT TLVGYCDADW GS DDRK+ SEVEAEYI AGSGCTQLIW KNMLLEYG DQ
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNTSEVEAEYIAAGSGCTQLIWTKNMLLEYGFDQ 295

Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           DTMTLYC NMSAIDIS NPVQ+SRT+HIDIRHHFI ELV+D
Sbjct: 296 DTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIPELVKD 335

BLAST of Cmc01g0013341 vs. NCBI nr
Match: KAA0066740.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 488.4 bits (1256), Expect = 4.1e-134
Identity = 242/281 (86.12%), Postives = 256/281 (91.10%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFPQDLVNNFIN MQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GEL CFLGLQI+QKND IFISQ+KYARN+VKKFGLEQARNKRTPA THVKL KD  GA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSIVGSLLYLTASRPDIAYAMGI ARYQ  P ITHLE +KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
           MMYSYDTT TLVGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIW KN+L EYG DQ
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWMKNVLHEYGFDQ 295

Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           DTMTLYC+NMSAIDISKN VQ+SRTKHIDIRHHFIRE VE+
Sbjct: 296 DTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 332

BLAST of Cmc01g0013341 vs. NCBI nr
Match: TYK23188.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 478.8 bits (1231), Expect = 3.2e-131
Identity = 240/305 (78.69%), Postives = 256/305 (83.93%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFP DLVNNFIN MQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GELSCFLG QIKQKND I ISQ+KYA+NM KKFGLEQARNKRTPAATHVKL +D  GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSIV +LLYLTASRPDIAYA+GICARYQADP I+HLE VKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSR------------------------SEVEAEY 240
           MMYSYDTT TLVGYCDADWAG  DDRKS                         S  EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 241 IVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 282
           IVAGSGCTQLIW +N+L EYG DQ T+TLY  NMSAIDISKNPVQ+SR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355

BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.7e-42
Identity = 105/314 (33.44%), Postives = 169/314 (53.82%), Query Frame = 0

Query: 2    YLRGRGYSRGEIDKTLFIHRKSD-QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 61
            +++ + Y +   D  ++  R S+   ++  +YVDD++  G  + L+     ++   F M 
Sbjct: 977  FMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMK 1036

Query: 62   MIGELSCFLGLQIKQKNDG--IFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTG 121
             +G     LG++I ++     +++SQEKY   ++++F ++ A+   TP A H+KL K   
Sbjct: 1037 DLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMC 1096

Query: 122  GAEVDHK------LYRSIVGSLLY-LTASRPDIAYAMGICARYQADPHITHLEVVKRILK 181
               V+ K       Y S VGSL+Y +  +RPDIA+A+G+ +R+  +P   H E VK IL+
Sbjct: 1097 PTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILR 1156

Query: 182  YVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKSR---------------------- 241
            Y+ GT+   + +   +   L GY DAD AG  D+RKS                       
Sbjct: 1157 YLRGTTGDCLCFG-GSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKCV 1216

Query: 242  --SEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKH 282
              S  EAEYI A     ++IW K  L E G+ Q    +YC + SAID+SKN + ++RTKH
Sbjct: 1217 ALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCDSQSAIDLSKNSMYHARTKH 1276

BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.0e-39
Identity = 100/304 (32.89%), Postives = 154/304 (50.66%), Query Frame = 0

Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSM 61
            YL   G+     D +LF+ ++   ++   +YVDDI+  G    L++N ++N+   F +  
Sbjct: 1120 YLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKD 1179

Query: 62   IGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAE 121
              EL  FLG++ K+   G+ +SQ +Y  +++ +  +  A+   TP A   KL   +G   
Sbjct: 1180 HEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKL 1239

Query: 122  VDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGM 181
             D   YR IVGSL YL  +RPDI+YA+   +++   P   HL+ +KRIL+Y+ GT + G+
Sbjct: 1240 TDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGI 1299

Query: 182  MYSYDTTSTLVGYCDADWAGSTDDRKS------------------------RSEVEAEYI 241
                  T +L  Y DADWAG  DD  S                        RS  EAEY 
Sbjct: 1300 FLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1359

Query: 242  VAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 281
               +  +++ W  ++L E G+       +YC N+ A  +  NPV +SR KHI I +HFIR
Sbjct: 1360 SVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIR 1419

BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.3e-39
Identity = 98/304 (32.24%), Postives = 152/304 (50.00%), Query Frame = 0

Query: 2    YLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSM 61
            YL   G+     D +LF+ ++   ++   +YVDDI+  G    L+ + ++ +   F +  
Sbjct: 1103 YLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKE 1162

Query: 62   IGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAE 121
              +L  FLG++ K+   G+ +SQ +Y  +++ +  +  A+   TP AT  KL   +G   
Sbjct: 1163 HEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKL 1222

Query: 122  VDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGM 181
             D   YR IVGSL YL  +RPD++YA+   ++Y   P   H   +KR+L+Y+ GT D G+
Sbjct: 1223 PDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGI 1282

Query: 182  MYSYDTTSTLVGYCDADWAGSTDDRKS------------------------RSEVEAEYI 241
                  T +L  Y DADWAG TDD  S                        RS  EAEY 
Sbjct: 1283 FLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYR 1342

Query: 242  VAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 281
               +  ++L W  ++L E G+       +YC N+ A  +  NPV +SR KHI + +HFIR
Sbjct: 1343 SVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRMKHIALDYHFIR 1402

BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 143.3 bits (360), Expect = 4.2e-33
Identity = 84/306 (27.45%), Postives = 157/306 (51.31%), Query Frame = 0

Query: 8    YSRGEIDKTLFIHRKS--DQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGEL 67
            +    +D+ ++I  K   ++ +   +YVDD++        +NNF   +  +F+M+ + E+
Sbjct: 1061 FVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEI 1120

Query: 68   SCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVD-H 127
              F+G++I+ + D I++SQ  Y + ++ KF +E      TP  +  K+  +   ++ D +
Sbjct: 1121 KHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPS--KINYELLNSDEDCN 1180

Query: 128  KLYRSIVGSLLY-LTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMY 187
               RS++G L+Y +  +RPD+  A+ I +RY +  +    + +KR+L+Y+ GT D  +++
Sbjct: 1181 TPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIF 1240

Query: 188  SYDTT--STLVGYCDADWAGSTDDRKS-------------------------RSEVEAEY 247
              +    + ++GY D+DWAGS  DRKS                          S  EAEY
Sbjct: 1241 KKNLAFENKIIGYVDSDWAGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEY 1300

Query: 248  IVAGSGCTQLIWKKNMLLEYGVD-QDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFI 282
            +       + +W K +L    +  ++ + +Y  N   I I+ NP  + R KHIDI++HF 
Sbjct: 1301 MALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCISIANNPSCHKRAKHIDIKYHFA 1360

BLAST of Cmc01g0013341 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.0e-27
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 0

Query: 31  IYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGLQIKQKNDGIFISQEKYARN 90
           +YVDDI+  G    L+N  I  + S F M  +G +  FLG+QIK    G+F+SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  MVKKFGLEQARNKRTPAATHVKLRKDTGGAEV-DHKLYRSIVGSLLYLTASRPDIAYAMG 150
           ++   G+   +   TP    +KL      A+  D   +RSIVG+L YLT +RPDI+YA+ 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKS 209
           I  +   +P +   +++KR+L+YV GT   G+    ++   +  +CD+DWAG T  R+S
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match: A0A5D3CA21 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G001740 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.4e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0

Query: 12  EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
           +++K L+  +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 216 KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 275

Query: 72  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
           QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 276 QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 335

Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
           GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 336 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 395

Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
           VGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 396 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 455

Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 456 AIDISKNPVQYSRTKHIDIRHHFIRELVED 481

BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match: A0A5A7U1W9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001410 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 3.4e-142
Identity = 253/270 (93.70%), Postives = 260/270 (96.30%), Query Frame = 0

Query: 12  EIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 71
           +++K L+  +KS+QLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL
Sbjct: 35  KLNKALYELKKSNQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGL 94

Query: 72  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEVDHKLYRSIV 131
           QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL KDTGGAEVDHKLYRSIV
Sbjct: 95  QIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLTKDTGGAEVDHKLYRSIV 154

Query: 132 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTL 191
           GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTT TL
Sbjct: 155 GSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTPTL 214

Query: 192 VGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 251
           VGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS
Sbjct: 215 VGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMS 274

Query: 252 AIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           AIDISKNPVQYSRTKHIDIRHHFIRELVED
Sbjct: 275 AIDISKNPVQYSRTKHIDIRHHFIRELVED 300

BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match: A0A5D3BPB5 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G00390 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.5e-137
Identity = 245/281 (87.19%), Postives = 256/281 (91.10%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFI+RKSDQLL+ QIYVDDIIFGGFPQDLVNNFIN MQSEFKMS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIYRKSDQLLVTQIYVDDIIFGGFPQDLVNNFINIMQSEFKMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GELSCFLGLQIKQ ND IFISQEKY RNMVKKFGLEQARNKRTPA THVKL KDT  A
Sbjct: 116 MVGELSCFLGLQIKQNNDDIFISQEKYTRNMVKKFGLEQARNKRTPAVTHVKLTKDTESA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSI+GSLLYLTASRPDIAY +GICARYQ DP ITHL  VK ILKYVHGTSDFG
Sbjct: 176 EVDHKLYRSIIGSLLYLTASRPDIAYVVGICARYQVDPCITHLVAVK-ILKYVHGTSDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
           MMYSYDTT TLVGYCDADW GS DDRK+ SEVEAEYI AGSGCTQLIW KNMLLEYG DQ
Sbjct: 236 MMYSYDTTLTLVGYCDADWEGSADDRKNTSEVEAEYIAAGSGCTQLIWTKNMLLEYGFDQ 295

Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           DTMTLYC NMSAIDIS NPVQ+SRT+HIDIRHHFI ELV+D
Sbjct: 296 DTMTLYCDNMSAIDISNNPVQHSRTRHIDIRHHFIPELVKD 335

BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match: A0A5D3DWS6 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G00720 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 242/281 (86.12%), Postives = 256/281 (91.10%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFPQDLVNNFIN MQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQDLVNNFINIMQSEFEMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GEL CFLGLQI+QKND IFISQ+KYARN+VKKFGLEQARNKRTPA THVKL KD  GA
Sbjct: 116 MVGELLCFLGLQIRQKNDDIFISQKKYARNIVKKFGLEQARNKRTPATTHVKLTKDIEGA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSIVGSLLYLTASRPDIAYAMGI ARYQ  P ITHLE +KRILKYVH T DFG
Sbjct: 176 EVDHKLYRSIVGSLLYLTASRPDIAYAMGIYARYQVVPRITHLEAIKRILKYVHRTCDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSRSEVEAEYIVAGSGCTQLIWKKNMLLEYGVDQ 240
           MMYSYDTT TLVGYCDADWAGSTDDRK    +EAEYI AGSGCTQLIW KN+L EYG DQ
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGSTDDRK----IEAEYIAAGSGCTQLIWMKNVLHEYGFDQ 295

Query: 241 DTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRELVED 282
           DTMTLYC+NMSAIDISKN VQ+SRTKHIDIRHHFIRE VE+
Sbjct: 296 DTMTLYCNNMSAIDISKNLVQHSRTKHIDIRHHFIREPVEE 332

BLAST of Cmc01g0013341 vs. ExPASy TrEMBL
Match: A0A5D3DI97 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002180 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.6e-131
Identity = 240/305 (78.69%), Postives = 256/305 (83.93%), Query Frame = 0

Query: 1   MYLRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMS 60
           +YLRG+GYSRGEIDKTLFIHRKSDQLL+AQIYVDDIIFGGFP DLVNNFIN MQSEF+MS
Sbjct: 56  VYLRGKGYSRGEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPHDLVNNFINIMQSEFEMS 115

Query: 61  MIGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGA 120
           M+GELSCFLG QIKQKND I ISQ+KYA+NM KKFGLEQARNKRTPAATHVKL +D  GA
Sbjct: 116 MVGELSCFLGFQIKQKNDDIIISQKKYAKNMAKKFGLEQARNKRTPAATHVKLTRDNDGA 175

Query: 121 EVDHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFG 180
           EVDHKLYRSIV +LLYLTASRPDIAYA+GICARYQADP I+HLE VKRILKYVHGT+DFG
Sbjct: 176 EVDHKLYRSIVSNLLYLTASRPDIAYAVGICARYQADPRISHLEAVKRILKYVHGTNDFG 235

Query: 181 MMYSYDTTSTLVGYCDADWAGSTDDRKSR------------------------SEVEAEY 240
           MMYSYDTT TLVGYCDADWAG  DDRKS                         S  EAEY
Sbjct: 236 MMYSYDTTPTLVGYCDADWAGLADDRKSTSGGCFFLGNNLIYWLSKKQNCVSLSTTEAEY 295

Query: 241 IVAGSGCTQLIWKKNMLLEYGVDQDTMTLYCHNMSAIDISKNPVQYSRTKHIDIRHHFIR 282
           IVAGSGCTQLIW +N+L EYG DQ T+TLY  NMSAIDISKNPVQ+SR KHIDIRHHFIR
Sbjct: 296 IVAGSGCTQLIWMENILDEYGFDQHTITLYSDNMSAIDISKNPVQHSRIKHIDIRHHFIR 355

BLAST of Cmc01g0013341 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 140.2 bits (352), Expect = 2.5e-33
Identity = 91/300 (30.33%), Postives = 139/300 (46.33%), Query Frame = 0

Query: 3   LRGRGYSRGEIDKTLFIHRKSDQLLMAQIYVDDIIFGGFPQDLVNNFINNMQSEFKMSMI 62
           L G G+ +   D T F+   +   L   +YVDDII        V+   + ++S FK+  +
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313

Query: 63  GELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLEQARNKRTPAATHVKLRKDTGGAEV 122
           G L  FLGL+I +   GI I Q KYA +++ + GL   +    P    V     +GG  V
Sbjct: 314 GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373

Query: 123 DHKLYRSIVGSLLYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMM 182
           D K YR ++G L+YL  +R DI++A+   +++   P + H + V +IL Y+ GT   G+ 
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433

Query: 183 YSYDTTSTLVGYCDADWAGSTDDRK------------------------SRSEVEAEYIV 242
           YS      L  + DA +    D R+                        S+S  EAEY  
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493

Query: 243 AGSGCTQLIWKKNMLLEYGVDQDTMT-LYCHNMSAIDISKNPVQYSRTKHIDIRHHFIRE 278
                 +++W      E  +     T L+C N +AI I+ N V + RTKHI+   H +RE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553

BLAST of Cmc01g0013341 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-28
Identity = 67/179 (37.43%), Postives = 102/179 (56.98%), Query Frame = 0

Query: 31  IYVDDIIFGGFPQDLVNNFINNMQSEFKMSMIGELSCFLGLQIKQKNDGIFISQEKYARN 90
           +YVDDI+  G    L+N  I  + S F M  +G +  FLG+QIK    G+F+SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 91  MVKKFGLEQARNKRTPAATHVKLRKDTGGAEV-DHKLYRSIVGSLLYLTASRPDIAYAMG 150
           ++   G+   +   TP    +KL      A+  D   +RSIVG+L YLT +RPDI+YA+ 
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 151 ICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGYCDADWAGSTDDRKS 209
           I  +   +P +   +++KR+L+YV GT   G+    ++   +  +CD+DWAG T  R+S
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181

BLAST of Cmc01g0013341 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 55.8 bits (133), Expect = 6.3e-08
Identity = 24/74 (32.43%), Postives = 42/74 (56.76%), Query Frame = 0

Query: 135 LYLTASRPDIAYAMGICARYQADPHITHLEVVKRILKYVHGTSDFGMMYSYDTTSTLVGY 194
           +YLT +RPD+ +A+   +++ +      ++ V ++L YV GT   G+ YS  +   L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 195 CDADWAGSTDDRKS 209
            D+DWA   D R+S
Sbjct: 61  ADSDWASCPDTRRS 74

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK08028.17.0e-14293.70gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0048226.17.0e-14293.70gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0066405.15.2e-13787.19gag-pol polyprotein [Cucumis melo var. makuwa] >TYK00880.1 gag-pol polyprotein [... [more]
KAA0066740.14.1e-13486.12gag-pol polyprotein [Cucumis melo var. makuwa] >TYK27888.1 gag-pol polyprotein [... [more]
TYK23188.13.2e-13178.69gag-pol polyprotein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
P109781.7e-4233.44Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q94HW21.0e-3932.89Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.3e-3932.24Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041464.2e-3327.45Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925192.0e-2737.43Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5D3CA213.4e-14293.70Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G... [more]
A0A5A7U1W93.4e-14293.70Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G0... [more]
A0A5D3BPB52.5e-13787.19Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G... [more]
A0A5D3DWS62.0e-13486.12Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G... [more]
A0A5D3DI971.6e-13178.69Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G... [more]
Match NameE-valueIdentityDescription
AT4G23160.12.5e-3330.33cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.11.4e-2837.43DNA/RNA polymerases superfamily protein [more]
ATMG00240.16.3e-0832.43Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..107
e-value: 9.4E-18
score: 64.7
NoneNo IPR availablePANTHERPTHR11439:SF308SUBFAMILY NOT NAMEDcoord: 100..208
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 100..208
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 192..281
e-value: 2.02064E-37
score: 127.584
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 15..271

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0013341.1Cmc01g0013341.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding