Cmc01g0007001 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0007001
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Epidermal patterning factor-like protein
Location	CMiso1.1chr01: 2586932 .. 2587957 (+)
RNA-Seq Expression	Cmc01g0007001
Synteny	Cmc01g0007001

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCTCTCTAAAAACAACTAATTACCTGATCTTAATTTTCTTCAACTTCTACTCTCAAATATCATGAAGCCTTTCACTTGCTTTTCTATTATCTTCATTGGTTTCTTATTATCCTCAACACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTAATTCACTCTCTTTTACCCTTTCTTCTTTCTTTCCTTTTTACTGTCATGAAAAAAGCAAAAACGACAAACAAAGAAAGCATACACAGTATGCAGAAATTTACGTAGTTTACTAATTATATGCATGCTAGCTACAACCACAGCCAAAAAGAGAGTAGTTTTATATAACGAGGTTATAATAGGATTAGTTAGTTTTATATATGACACCCTTTTGAACCCTTTATATGTTTTAGATAAGTATTTTTGAAACATGTCATTTAATTTCTATGTGTAGGTCATGGCCATCACCGCAAGGGGGCAGCATCCTCTGGTAAAGCAGCAATGGTAGTGGTGAATGAGAAGGTGACGATGATGACGATGGGGAGAAAAGGAACGGAGACGGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTCGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAAATCCAAACCCACTTTTCTTAATTAATTTCGTTGGAACAACTTTACAGGGTTGGATGTATAAGGAAACAAAAATCAAAAAAGTTTTAGTTCTATTGTATTGTATATCCAATATGATTTAGAGAGTACTAACTACAGTGTGATCACCGTCACATTGTATGTACAAATATATCGATCAACTGTAGTTTTTCTACTAACATTTCTTGTTTCTTTCAGTTCTTTTCTTTCTTGATTTTTTTTTGCGAGTATTAATCAGAGAGTTGTAATCAAAGAGCATATATTTGAGTAACATTTTGACAACTTAGATATATTTATGTCTGTTC

mRNA sequence

CCTCTCTCTAAAAACAACTAATTACCTGATCTTAATTTTCTTCAACTTCTACTCTCAAATATCATGAAGCCTTTCACTTGCTTTTCTATTATCTTCATTGGTTTCTTATTATCCTCAACACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCATCACCGCAAGGGGGCAGCATCCTCTGGTAAAGCAGCAATGGTAGTGGTGAATGAGAAGGTGACGATGATGACGATGGGGAGAAAAGGAACGGAGACGGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTCGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAAATCCAAACCCACTTTTCTTAATTAATTTCGTTGGAACAACTTTACAGGGTTGGATGTATAAGGAAACAAAAATCAAAAAAGTTTTAGTTCTATTGTATTGTATATCCAATATGATTTAGAGAGTACTAACTACAGTGTGATCACCGTCACATTGTATGTACAAATATATCGATCAACTGTAGTTTTTCTACTAACATTTCTTGTTTCTTTCAGTTCTTTTCTTTCTTGATTTTTTTTTGCGAGTATTAATCAGAGAGTTGTAATCAAAGAGCATATATTTGAGTAACATTTTGACAACTTAGATATATTTATGTCTGTTC

Coding sequence (CDS)

ATGAAGCCTTTCACTTGCTTTTCTATTATCTTCATTGGTTTCTTATTATCCTCAACACCCATTTCCTCCAGACGCATTTCTCAACAAAACTCACGTCATGGCCATCACCGCAAGGGGGCAGCATCCTCTGGTAAAGCAGCAATGGTAGTGGTGAATGAGAAGGTGACGATGATGACGATGGGGAGAAAAGGAACGGAGACGGTTGAAGTAGCAGGGTCGAGCTTGCCGGATTGTTCACATGCGTGTGGCTCATGCTCGCCTTGCAGATTAGTGATGATAAGCTTCGTGTGTGCTTCACTTCAAGAGGCTGAAACATGTCCAATGGCTTATAGATGCATGTGCAATAACAAGTCCTATCCTGTTCCTTAA

Protein sequence

MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP

Homology

[Close]

BLAST of Cmc01g0007001 vs. NCBI nr
Match: XP_008455333.1 (PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo])

HSP 1 Score: 248.1 bits (632), Expect = 4.0e-62
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60
           MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60

Query: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
           GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120

Query: 121 VP 123
           VP
Sbjct: 121 VP 122

[Close]

BLAST of Cmc01g0007001 vs. NCBI nr
Match: XP_004136818.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical protein Csa_020445 [Cucumis sativus])

HSP 1 Score: 227.6 bits (579), Expect = 5.6e-56
Identity = 116/124 (93.55%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAA-SSGKAAMVVVNEKVTMMT 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAA SSGKAAMVVV EK  MMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  -MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 123
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of Cmc01g0007001 vs. NCBI nr
Match: KAA0031583.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo var. makuwa] >TYK07035.1 protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo var. makuwa])

HSP 1 Score: 187.6 bits (475), Expect = 6.5e-44
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 33  HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM 92
           HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM
Sbjct: 15  HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM 74

Query: 93  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           ISFVCASLQEAETCPMAYRCMCNNKSYPVP
Sbjct: 75  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 104

[Close]

BLAST of Cmc01g0007001 vs. NCBI nr
Match: XP_038888568.1 (protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida])

HSP 1 Score: 178.7 bits (452), Expect = 3.0e-41
Identity = 89/122 (72.95%), Postives = 98/122 (80.33%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60
           M P T FSI+FI F L  TPISSR ISQ+NS HGHHRK A ++ K  +    +K     +
Sbjct: 1   MNPSTWFSILFIAFFLFPTPISSRHISQRNSHHGHHRKMATTTVKEKLYSPEKKA---VI 60

Query: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
           GRKG +TVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGADTVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 119

Query: 121 VP 123
           +P
Sbjct: 121 IP 119

[Close]

BLAST of Cmc01g0007001 vs. NCBI nr
Match: XP_022930814.1 (uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 uncharacterized protein LOC111793854 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178.3 bits (451), Expect = 3.9e-41
Identity = 92/129 (71.32%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVV-------VNE 60
           MK   CFS+IFI FLL   PISSRRISQ NSR GHH K A  S +A           V +
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  KVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
            V    MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 123
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Cmc01g0007001 vs. ExPASy Swiss-Prot
Match: Q8S8I4 (Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-26
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 62  RKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 121
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 122 P 123
           P
Sbjct: 104 P 104

[Close]

BLAST of Cmc01g0007001 vs. ExPASy Swiss-Prot
Match: Q8LC53 (Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-11
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 72  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Cmc01g0007001 vs. ExPASy Swiss-Prot
Match: C4B8C5 (EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EPFL7 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-11
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 69  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Cmc01g0007001 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 6.8e-04
Identity = 37/124 (29.84%), Postives = 57/124 (45.97%), Query Frame = 0


Query: 4   FTCFSIIFIGFLL------SSTPISSRRISQQNSRHGH-HRKGAASSGKAAMVV-VNEKV 63
           F+ F ++ + F+L      + TP S+     +NS  G      A   GK+ +V+    K+
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 64  TMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120
              +   +    +   GSS P CS  CG C+PC+ V +     +   AE  P A+RC C 
Sbjct: 91  GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCG 150

[Close]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL
Match: A0A1S3C0N9 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.0e-62
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60
           MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM
Sbjct: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60

Query: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
           GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP
Sbjct: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120

Query: 121 VP 123
           VP
Sbjct: 121 VP 122

[Close]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL
Match: A0A0A0K5P8 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047370 PE=3 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 2.7e-56
Identity = 116/124 (93.55%), Postives = 117/124 (94.35%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAA-SSGKAAMVVVNEKVTMMT 60
           MKPFTCFSI+FI FLL STPISSRRISQQNSRHGHHRKGAA SSGKAAMVVV EK  MMT
Sbjct: 1   MKPFTCFSILFIAFLLFSTPISSRRISQQNSRHGHHRKGAASSSGKAAMVVVKEKAAMMT 60

Query: 61  -MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120
            MGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS
Sbjct: 61  RMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKS 120

Query: 121 YPVP 123
           YPVP
Sbjct: 121 YPVP 124

[Close]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL
Match: A0A5A7SMZ1 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003530 PE=3 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.1e-44
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 33  HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM 92
           HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM
Sbjct: 15  HGHHRKGAASSGKAAMVVVNEKVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVM 74

Query: 93  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           ISFVCASLQEAETCPMAYRCMCNNKSYPVP
Sbjct: 75  ISFVCASLQEAETCPMAYRCMCNNKSYPVP 104

[Close]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL
Match: A0A6J1ESJ9 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111437184 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 92/129 (71.32%), Postives = 96/129 (74.42%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVV-------VNE 60
           MK   CFS+IFI FLL   PISSRRISQ NSR GHH K A  S +A           V +
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVRAVEAAKGKSYWPVTK 60

Query: 61  KVTMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCM 120
            V    MGRKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCM
Sbjct: 61  AVAAAVMGRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCM 120

Query: 121 CNNKSYPVP 123
           CNNKSYPVP
Sbjct: 121 CNNKSYPVP 129

[Close]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL
Match: A0A6J1JEL1 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111486204 PE=3 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 1.0e-39
Identity = 88/122 (72.13%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MKPFTCFSIIFIGFLLSSTPISSRRISQQNSRHGHHRKGAASSGKAAMVVVNEKVTMMTM 60
           MK   CFS+IFI FLL   PISSRRISQ NSR GHH K A  S + A+    +      +
Sbjct: 1   MKGLPCFSLIFIAFLLFPIPISSRRISQLNSRRGHHHKAAVDSVR-AVEAAKQNSYWPAL 60

Query: 61  GRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYP 120
            RKG ETVEVAGSSLPDCSHACGSCSPCRLVMISFVCA+L EAETCPMAYRCMCNNKSYP
Sbjct: 61  WRKGPETVEVAGSSLPDCSHACGSCSPCRLVMISFVCATLHEAETCPMAYRCMCNNKSYP 120

Query: 121 VP 123
           VP
Sbjct: 121 VP 121

[Close]

BLAST of Cmc01g0007001 vs. TAIR 10
Match: AT2G20875.1 (epidermal patterning factor 1 )

HSP 1 Score: 117.9 bits (294), Expect = 5.9e-27
Identity = 51/61 (83.61%), Postives = 58/61 (95.08%), Query Frame = 0


Query: 62  RKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPV 121
           R+  +TV+VAGS LPDCSHACGSCSPCRLVM+SFVCAS++EAETCPMAY+CMCNNKSYPV
Sbjct: 44  RRRPDTVQVAGSRLPDCSHACGSCSPCRLVMVSFVCASVEEAETCPMAYKCMCNNKSYPV 103

Query: 122 P 123
           P
Sbjct: 104 P 104

[Close]

BLAST of Cmc01g0007001 vs. TAIR 10
Match: AT1G34245.1 (Putative membrane lipoprotein )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 31/51 (60.78%), Postives = 38/51 (74.51%), Query Frame = 0


Query: 72  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           GSSLPDCS+ACG+CSPC+ VMISF C+    AE+C + YRC C  + Y VP
Sbjct: 70  GSSLPDCSYACGACSPCKRVMISFECS---VAESCSVIYRCTCRGRYYHVP 117

[Close]

BLAST of Cmc01g0007001 vs. TAIR 10
Match: AT1G71866.1 (LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Putative membrane lipoprotein (TAIR:AT1G34245.1). )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 0


Query: 69  EVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSYPVP 123
           + +GSS+PDCS+ACG C PC+LV+IS  C++   +E CP+ Y+C+C  K Y VP
Sbjct: 119 KASGSSIPDCSNACGPCKPCKLVVISSTCSA---SEACPLVYKCLCKGKYYHVP 169

[Close]

BLAST of Cmc01g0007001 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 45.8 bits (107), Expect = 2.8e-05
Identity = 22/48 (45.83%), Postives = 27/48 (56.25%), Query Frame = 0


Query: 72  GSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCNNKSY 120
           GSS P CS  CG C+PC+ V +     +   AE  P A+RC C NK Y
Sbjct: 181 GSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLY 228

[Close]

BLAST of Cmc01g0007001 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 45.1 bits (105), Expect = 4.8e-05
Identity = 37/124 (29.84%), Postives = 57/124 (45.97%), Query Frame = 0


Query: 4   FTCFSIIFIGFLL------SSTPISSRRISQQNSRHGH-HRKGAASSGKAAMVV-VNEKV 63
           F+ F ++ + F+L      + TP S+     +NS  G      A   GK+ +V+    K+
Sbjct: 31  FSLFYLLLLFFVLCVIATFTITPTSTSSPYNRNSNSGTLGNFYAKEEGKSTVVIKKTRKI 90

Query: 64  TMMTMGRKGTETVEVAGSSLPDCSHACGSCSPCRLVMISFVCASLQEAETCPMAYRCMCN 120
              +   +    +   GSS P CS  CG C+PC+ V +     +   AE  P A+RC C 
Sbjct: 91  GDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCG 150

The following BLAST results are available for this feature:

BLAST of Cmc01g0007001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455333.1	4.0e-62	100.00	PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo]	[more]
XP_004136818.1	5.6e-56	93.55	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis sativus] >KGN43602.1 hypothetical...	[more]
KAA0031583.1	6.5e-44	100.00	protein EPIDERMAL PATTERNING FACTOR 1 [Cucumis melo var. makuwa] >TYK07035.1 pro...	[more]
XP_038888568.1	3.0e-41	72.95	protein EPIDERMAL PATTERNING FACTOR 1 [Benincasa hispida]	[more]
XP_022930814.1	3.9e-41	71.32	uncharacterized protein LOC111437184 [Cucurbita moschata] >XP_023531684.1 unchar...	[more]

BLAST of Cmc01g0007001 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8I4	8.3e-26	83.61	Protein EPIDERMAL PATTERNING FACTOR 1 OS=Arabidopsis thaliana OX=3702 GN=EPF1 PE...	[more]
Q8LC53	4.4e-11	60.78	Protein EPIDERMAL PATTERNING FACTOR 2 OS=Arabidopsis thaliana OX=3702 GN=EPF2 PE...	[more]
C4B8C5	4.4e-11	51.85	EPIDERMAL PATTERNING FACTOR-like protein 7 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	6.8e-04	29.84	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]

BLAST of Cmc01g0007001 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C0N9	2.0e-62	100.00	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103495522...	[more]
A0A0A0K5P8	2.7e-56	93.55	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_7G047...	[more]
A0A5A7SMZ1	3.1e-44	100.00	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1ESJ9	1.9e-41	71.32	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEL1	1.0e-39	72.13	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]

BLAST of Cmc01g0007001 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20875.1	5.9e-27	83.61	epidermal patterning factor 1	[more]
AT1G34245.1	3.1e-12	60.78	Putative membrane lipoprotein	[more]
AT1G71866.1	3.1e-12	51.85	LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Put...	[more]
AT2G30370.1	2.8e-05	45.83	allergen-related	[more]
AT2G30370.2	4.8e-05	29.84	allergen-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 71..120 e-value: 4.0E-15 score: 55.5
None	No IPR available	PANTHER	PTHR33109:SF41	PROTEIN EPIDERMAL PATTERNING FACTOR 1	coord: 4..122
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 4..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0007001.1	Cmc01g0007001.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region