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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. TACATTTAGATACATCTATGAAAATTGAGGATTTAAAGTCGAAAGAGAAGGTCGGATGATCTAAAGCTAACCACGTCAACATGAAACAAGTCCAAAACATGTGATTGTGATCGAGTGGTTATAACTTGTAAAGGCACATATTTCTATGTTAGGTTGTATGGTATTTTGATTTCTAACCACTATTCGAAAATTACTACGATTAATTGCATGATGAAGTATATGAGCTTTTGGCGCCAAGAATTTCATGATCATCGCAAGATCGAAGAAGAAACTCAATCGATCGAAAATGTCATCGCCGAGAGGATGCTTTTTATGCTTACAACGAGCTCTCTCCTCGAATTATTTTCATGTTCAGAGGACAACATTAATTTTTTAGTGATCAGATTTCATCATTCCTTCAAATTTAGGGCATTCTGCGTGTTGATTTTTTGGGGAAGATCGTGATGCCACTTCATGCTCCCCAAAATTCGGCCACATTTCGTAGCATCAGAGCCTCTTCCATGGCTCGTATCAAGTACATGAGCTCGTCGTCGACTAGGCTACTAGGTGGCGCAATTGATACATTGTTGTTGAAATTGGAAGAAGCTCCTCTTCGCTCTGTTCGTCGTTCGAACAAGGTAAATCTGCAAACCGGACATTGGCCGTTGCTCTTCACCCATGGAACTATGCATTGCTCGTGAAACATATGGTTGCACGGCGTCGTCATCACCTCCTCTTTTGGCTGGAAATCTTCAAGGCAAACGGCGCATCCCTTGCCTTCTTCATCACTATTGTTGTTGTGCCTCTCATTGTAGTTTACTCTGTTATTCTCTCTGTAATAGAAATTTATTCTCCTACTCGTGTTACTCGGAGGATCATAAACTTTTTTCTTCAGCTTATTCAGAGCCATATTTTGCTCTTCAGATGTTAGCGTCGAGTTCCCTTCGGATCTTGGAGTTGGTGAGTACAGCTCCGCAGGTATTGGACTGGCCTCAATCTGTCTCGGTCTTGAGTGTGTGATGATTCTGACTATTGCAGGTGGTTCTTCTGGAAGGCTGGAAATTTCTCAAAAAGTCAATGAATTATCAACAAAGTATGGAGGATATGGATTTTACTTGCAGAATGTAAGGCAATGTAAGTAAATTCCCCCTGAAACCAAATGATATTGTCAAAGAGGATTTAGTTTGTTATTTCAAATTTGGATGCTGCTCATGAAAAAAAAATTGAAAATTATTGCTATCTGTTCTTCTCAAAAGTTACAGCTATTTATAATAGCAATTCAATCAAGAATGCCATATTTCTATT mRNA sequence TACATTTAGATACATCTATGAAAATTGAGGATTTAAAGTCGAAAGAGAAGGTCGGATGATCTAAAGCTAACCACGTCAACATGAAACAAGTCCAAAACATGTGATTGTGATCGAGTGGTTATAACTTGTAAAGGCACATATTTCTATGTTAGGTTGTATGGTATTTTGATTTCTAACCACTATTCGAAAATTACTACGATTAATTGCATGATGAAGTATATGAGCTTTTGGCGCCAAGAATTTCATGATCATCGCAAGATCGAAGAAGAAACTCAATCGATCGAAAATGTCATCGCCGAGAGGATGCTTTTTATGCTTACAACGAGCTCTCTCCTCGAATTATTTTCATGTTCAGAGGACAACATTAATTTTTTAGTGATCAGATTTCATCATTCCTTCAAATTTAGGGCATTCTGCGTGTTGATTTTTTGGGGAAGATCGTGATGCCACTTCATGCTCCCCAAAATTCGGCCACATTTCGTAGCATCAGAGCCTCTTCCATGGCTCGTATCAAGTACATGAGCTCGTCGTCGACTAGGCTACTAGGTGGCGCAATTGATACATTGTTGTTGAAATTGGAAGAAGCTCCTCTTCGCTCTGTTCGTCGTTCGAACAAGGTAAATCTGCAAACCGGACATTGGCCGTTGCTCTTCACCCATGGAACTATGCATTGCTCGTGAAACATATGGTTGCACGGCGTCGTCATCACCTCCTCTTTTGGCTGGAAATCTTCAAGATGTTAGCGTCGAGTTCCCTTCGGATCTTGGAGTTGGTGGTTCTTCTGGAAGGCTGGAAATTTCTCAAAAAGTCAATGAATTATCAACAAAGTATGGAGGATATGGATTTTACTTGCAGAATGTAAGGCAATGTAAGTAAATTCCCCCTGAAACCAAATGATATTGTCAAAGAGGATTTAGTTTGTTATTTCAAATTTGGATGCTGCTCATGAAAAAAAAATTGAAAATTATTGCTATCTGTTCTTCTCAAAAGTTACAGCTATTTATAATAGCAATTCAATCAAGAATGCCATATTTCTATT Coding sequence (CDS) ATGCCACTTCATGCTCCCCAAAATTCGGCCACATTTCGTAGCATCAGAGCCTCTTCCATGGCTCGTATCAAGTACATGAGCTCGTCGTCGACTAGGCTACTAGGTGGCGCAATTGATACATTGTTGTTGAAATTGGAAGAAGCTCCTCTTCGCTCTGTTCGTCGTTCGAACAAGGTAAATCTGCAAACCGGACATTGGCCGTTGCTCTTCACCCATGGAACTATGCATTGCTCGTGA Protein sequence MPLHAPQNSATFRSIRASSMARIKYMSSSSTRLLGGAIDTLLLKLEEAPLRSVRRSNKVNLQTGHWPLLFTHGTMHCS
Homology
BLAST of Cmc01g0006521 vs. NCBI nr
Match: KAG7022948.1 (hypothetical protein SDJN02_16684, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 38/58 (65.52%), Postives = 42/58 (72.41%), Query Frame = 0 Query: 1 MPLHAPQNSATFRSIRASSMARIKYMSSSSTRLLGGAIDTLLLKLEEAPLRSVRRSNK 59 M H+P N FRSIR SSMARI+Y SSSSTRLL AID L L+EA LR+V RSNK Sbjct: 1 MAPHSPHNPVRFRSIRESSMARIRYTSSSSTRLLPDAIDAAL--LDEASLRTV-RSNK 55
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAG7022948.1 | 1.3e-05 | 65.52 | hypothetical protein SDJN02_16684, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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