Cmc01g0005091 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0005091
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Unknown protein
Location	CMiso1.1chr01: 1404733 .. 1407191 (+)
RNA-Seq Expression	Cmc01g0005091
Synteny	Cmc01g0005091

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACCAAAAGACATAATAATAATAATCAATCACAGAAGGGGGAGAGAGAGAGATCAAGTGTAAAGGGATAGGTTTGCACACAACTATATATTAAATTCTTATTCCATAATAATATGATAACATATCATTATTTCCACACAAATAAACAGGAAAAAGTGACACAGACACAAATGCATGGAATCAAATGTGCACTTTCACACCCTGTTTTTGAGGATTACATATTAAGAGTCAGCTCTTCCTCTTGAGCTTCCATTGAAAACTTAGAGAAAAAAAGAAAACTAAACAGAAGTCCCATTATTTTTCATCCATAACAATACCACCAAATAACCCACATAGAAAGAGAGCTAGGGAGAGAAGAGAGAGTGTTTATCAGAGAATTAAGCTCAGTTTCTGGTCAAGGAGAAGGATTAGATGGTGGAGAGAAAAATGGGAAGTTGGGAAAGATGGAAGAAGGAGTATTCGGACCAAAAAATGTAAGTGGAGGAGGCAATCTGAATTCAGGGTAAAATGGTGGCACATTGAAATCCGGGAGCTCCGGAAAATCCGAAGCCAAGAGCTTACGAGATACGATAGTGGAGGAGGAGGAGAAAGAGGAAGAAGAACTCAAGCTTGAAAGAAGCAATGTGGCAAGAAAAGCAACGAGAAGAGTAAAACGAGCCATTGTTTAGAATAATAATGGTAATGTGGTTTGAGTTAGAAGTTGGATTATTTGAGGTTTTATATAGATGAATAGTGTGGGCCATCTTTTAAGTACATTAACAAGTATTATTAGTTAAAAGCTAGGTTACAAAATCAACGATTAAACAATGTGAAGAATGTAAAGATTAACACATATATAATGGTTATTTACTAACCGTTAGTAAAGCGAAATTGAGATTCGATTATGATTTTTGATCTCATTAGATTGGTATGATTCATGCATGCAAAGTTTGGAGGAGTTACTTCCATCTAAATTAGAGGTGGGTTTTTATTGTAGAGGGGATCTTTTTATTTATGCCTATTGTAAATGTAGTCAAATTTGGTTGTTTAAAATGGTTGAGGTTGGAGAATTATGTAATAAATAATAGAAGGTCCAGAAGGTTGTAGCTATTAAGCTAGCTGCTTTTATGTGTGGGTAATGAATGTGTTTAGGAATTGTATAGAAATAAATGAGTAGCTAGATACGTTTTTTTCTTGGCATTAGAGATTGAAATTATTATATAAGATGATATACTTGAAAATTATTCGAGGATTATCTAAGTCAAAGACGCAAAAAGGCCAGTATGATGTAATCAAGTTTAAGGAAAACTGAAGGGTGATATGGTGGAAAAACGTGCCCCAAATAAAGGTTGGTACGTTCTCAAATATCGATCTAACCAACCTCATGAATATATATAAATTAGGAAATAAATAAGTTTGGCTTGGTTTGGCATTTGCAATCTCAAGCAACAAATTGTAATATCCCAAATGTTTAAATAATTCATTTGAATTAATTTTATCATATATATATATATATTACATTAAACAATACAATAATCAGTGATGGTATGTCACACACTAAAAGAAGTACTCATTCATATATAGTATATGTTTTATAAGAAGACATCATATAACTGTATCGACATGCTGATAGGAAAAGAAAAACAACACGCCATAACACGTATCAGAAATCATACAACTAAAGAGAAAGTTACATAACAAAAGAAAAAAGAAAAGAGAACAATTCATTTTCTAGTGCTTTGGATGAATATGTGCTATTCAAGGGTTTGATGTGGTCGTGTGGGGTGGGTTAAATGAAGGGAAAGGCATGTCTTTTGGAAGAGTAGGAAGAACTGGTTTTGGGAGAGGTGATAATTCAGGCAATTTAGGGAGTTCTGGTTTAGGAACATTTGGTAATTCAGGTAATTTTGGGAGTTCTGGTTTAGGCACATTTGGCAATTCAGGTAATTTTGGGAGTTCTGGTTTAAGTCCATTTGACAATTCAGGTGATTTTGGGAGTTCAGATTGTGGTGGATTTGAAACTTCAGACAACTTAGGAAGATCAAACTTAGGCACACTTGGAACTTGAGGAATTTTGGAGAGATCGAGATTAGGTACTTTTGGTAATTCAGGCAACTTTGGGAGTTCAGGCTTTGACAATTCAGGAAGTTTAGGCTTTTCCAAAGGTGGAAGATGAGGCAATGGAGGTAACTCAAACTTTGGTAGTGGAGGAAGCTCAGGTTTTGCCAAAGTGGGTATTTCAAGCTTTGGAAGTTCTTCAGGTACCTTAGGTAACGGCGTCTCCAAAAGATGCCTTGCACTTGCTGTCATGATAAAGAAATCAAAGCTCATCATTATCATAAGAACACCAAATATGAGGTGCGATGCAAAGGTTGAGTAGCGATGAGTAGACATTGAATTCAAGAAAACACAACAAAAAGCAATAGCAAAATCTATATAGATAATGGATCTTGAAATGAAGTTGATTAGATCAATTACGTG

mRNA sequence

TACCAAAAGACATAATAATAATAATCAATCACAGAAGGGGGAGAGAGAGAGATCAAGTGTAAAGGGATAGGTTTGCACACAACTATATATTAAATTCTTATTCCATAATAATATGATAACATATCATTATTTCCACACAAATAAACAGGAAAAAGTGACACAGACACAAATGCATGGAATCAAATGTGCACTTTCACACCCTGTTTTTGAGGATTACATATTAAGAGTCAGCTCTTCCTCTTGAGCTTCCATTGAAAACTTAGAGAAAAAAAGAAAACTAAACAGAAGTCCCATTATTTTTCATCCATAACAATACCACCAAATAACCCACATAGAAAGAGAGCTAGGGAGAGAAGAGAGAGTGTTTATCAGAGAATTAAGCTCAGTTTCTGGTCAAGGAGAAGGATTAGATGGTGGAGAGAAAAATGGGAAGTTGGGAAAGATGGAAGAAGGAGTATTCGGACCAAAAAATGTAAGTGGAGGAGGCAATCTGAATTCAGGGTAAAATGGTGGCACATTGAAATCCGGGAGCTCCGGAAAATCCGAAGCCAAGAGCTTACGAGATACGATAGTGGAGGAGGAGGAGAAAGAGGAAGAAGAACTCAAGCTTGAAAGAAGCAATGTGGCAAGAAAAGCAACGAGAAGAGTAAAACGAGCCATTGTTTAGAATAATAATGGTAATGTGGTTTGAGTTAGAAGTTGGATTATTTGAGGTTTTATATAGATGAATAGTGTGGGCCATCTTTTAAGTACATTAACAAGTATTATTAGTTAAAAGCTAGGTTACAAAATCAACGATTAAACAATGTGAAGAATGTAAAGATTAACACATATATAATGGTTATTTACTAACCGTTAGTAAAGCGAAATTGAGATTCGATTATGATTTTTGATCTCATTAGATTGGTATGATTCATGCATGCAAAGTTTGGAGGAGTTACTTCCATCTAAATTAGAGGTGGGTTTTTATTGTAGAGGGGATCTTTTTATTTATGCCTATTGTAAATGTAGTCAAATTTGGTTGTTTAAAATGGTTGAGGTTGGAGAATTATGTAATAAATAATAGAAGGTCCAGAAGGTTGTAGCTATTAAGCTAGCTGCTTTTATGTGTGGGTAATGAATGTGTTTAGGAATTGTATAGAAATAAATGAGTAGCTAGATACGTTTTTTTCTTGGCATTAGAGATTGAAATTATTATATAAGATGATATACTTGAAAATTATTCGAGGATTATCTAAGTCAAAGACGCAAAAAGGCCAGTATGATGTAATCAAGTTTAAGGAAAACTGAAGGGTGATATGGTGGAAAAACGTGCCCCAAATAAAGGTTGGTACGTTCTCAAATATCGATCTAACCAACCTCATGAATATATATAAATTAGGAAATAAATAAGTTTGGCTTGGTTTGGCATTTGCAATCTCAAGCAACAAATTGTAATATCCCAAATGTTTAAATAATTCATTTGAATTAATTTTATCATATATATATATATATTACATTAAACAATACAATAATCAGTGATGGTATGTCACACACTAAAAGAAGTACTCATTCATATATAGTATATGTTTTATAAGAAGACATCATATAACTGTATCGACATGCTGATAGGAAAAGAAAAACAACACGCCATAACACGTATCAGAAATCATACAACTAAAGAGAAAGTTACATAACAAAAGAAAAAAGAAAAGAGAACAATTCATTTTCTAGTGCTTTGGATGAATATGTGCTATTCAAGGGTTTGATGTGGTCGTGTGGGGTGGGTTAAATGAAGGGAAAGGCATGTCTTTTGGAAGAGTAGGAAGAACTGGTTTTGGGAGAGGTGATAATTCAGGCAATTTAGGGAGTTCTGGTTTAGGAACATTTGGTAATTCAGGTAATTTTGGGAGTTCTGGTTTAGGCACATTTGGCAATTCAGGTAATTTTGGGAGTTCTGGTTTAAGTCCATTTGACAATTCAGGTGATTTTGGGAGTTCAGATTGTGGTGGATTTGAAACTTCAGACAACTTAGGAAGATCAAACTTAGGCACACTTGGAACTTGAGGAATTTTGGAGAGATCGAGATTAGGTACTTTTGGTAATTCAGGCAACTTTGGGAGTTCAGGCTTTGACAATTCAGGAAGTTTAGGCTTTTCCAAAGGTGGAAGATGAGGCAATGGAGGTAACTCAAACTTTGGTAGTGGAGGAAGCTCAGGTTTTGCCAAAGTGGGTATTTCAAGCTTTGGAAGTTCTTCAGGTACCTTAGGTAACGGCGTCTCCAAAAGATGCCTTGCACTTGCTGTCATGATAAAGAAATCAAAGCTCATCATTATCATAAGAACACCAAATATGAGGTGCGATGCAAAGGTTGAGTAGCGATGAGTAGACATTGAATTCAAGAAAACACAACAAAAAGCAATAGCAAAATCTATATAGATAATGGATCTTGAAATGAAGTTGATTAGATCAATTACGTG

Coding sequence (CDS)

ATGTCTTTTGGAAGAGTAGGAAGAACTGGTTTTGGGAGAGGTGATAATTCAGGCAATTTAGGGAGTTCTGGTTTAGGAACATTTGGTAATTCAGGTAATTTTGGGAGTTCTGGTTTAGGCACATTTGGCAATTCAGGTAATTTTGGGAGTTCTGGTTTAAGTCCATTTGACAATTCAGGTGATTTTGGGAGTTCAGATTGTGGTGGATTTGAAACTTCAGACAACTTAGGAAGATCAAACTTAGGCACACTTGGAACTTGA

Protein sequence

MSFGRVGRTGFGRGDNSGNLGSSGLGTFGNSGNFGSSGLGTFGNSGNFGSSGLSPFDNSGDFGSSDCGGFETSDNLGRSNLGTLGT

Homology

[Close]

BLAST of Cmc01g0005091 vs. ExPASy TrEMBL
Match: A0A061E185 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_047110 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-04
Identity = 47/91 (51.65%), Postives = 51/91 (56.04%), Query Frame = 0


Query: 4  GRVGRTGFGRGDNSGNLGSSGLGT--------FGNSGNFGSSGLGTFGNSGNFGSSGLSP 63
          G +G +GFG   NSG LGSSG G         FGNSG FG+SG G  G  GN G+ G S 
Sbjct: 3  GSLGNSGFG---NSGTLGSSGFGMSGNLGNSGFGNSGTFGNSGSGNSGALGNSGTVGNSG 62

Query: 64 FDNSGDFGSSDCGGFETSDNLGRSNLGTLGT 87
            NSG F SS   GF  SDNLG S  G  GT
Sbjct: 63 VGNSGAFTSS---GFRNSDNLGNSGFGDSGT 87

The following BLAST results are available for this feature:

BLAST of Cmc01g0005091 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0005091 vs.


Match Name	E-value	Identity	Description

BLAST of Cmc01g0005091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A061E185	8.5e-04	51.65	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_047110 PE=4 SV=1	[more]

BLAST of Cmc01g0005091 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0005091.1	Cmc01g0005091.1	mRNA