Cmc01g0004461 (gene) Melon (Charmono) v1.1

Overview
NameCmc01g0004461
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionPathogenesis-related protein 1
LocationCMiso1.1chr01: 1046034 .. 1046522 (-)
RNA-Seq ExpressionCmc01g0004461
SyntenyCmc01g0004461
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAAAATGGCACTCTCCAACATTCCCTCATCCATTTGCTTGATCATGCTAACCTTAATCCCCATGATCGTTGCTCATAATACCCCCCAAAACTACGTCGACGCCCACAATGCAGTTCGAGCTGAGGTTGGGGTCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCTCAAAATTATCTCGATTCAAAGGTTTCAACGTGTGAGATGGTGCACTCCAATGGGCCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCGGCAGCTGCAGTACAGGCATGGGCGGATGAGAAGAAATACTATGACCATAATTCCAACACGTGCGTCGGGGGAGAGTGTCGCCATTACACCCAATTGGTCTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCTGCTGGTAATGTTGCTGGAGAGCTACCTTATTAG

mRNA sequence

ATGTCAAAAATGGCACTCTCCAACATTCCCTCATCCATTTGCTTGATCATGCTAACCTTAATCCCCATGATCGTTGCTCATAATACCCCCCAAAACTACGTCGACGCCCACAATGCAGTTCGAGCTGAGGTTGGGGTCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCTCAAAATTATCTCGATTCAAAGGTTTCAACGTGTGAGATGGTGCACTCCAATGGGCCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCGGCAGCTGCAGTACAGGCATGGGCGGATGAGAAGAAATACTATGACCATAATTCCAACACGTGCGTCGGGGGAGAGTGTCGCCATTACACCCAATTGGTCTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCTGCTGGTAATGTTGCTGGAGAGCTACCTTATTAG

Coding sequence (CDS)

ATGTCAAAAATGGCACTCTCCAACATTCCCTCATCCATTTGCTTGATCATGCTAACCTTAATCCCCATGATCGTTGCTCATAATACCCCCCAAAACTACGTCGACGCCCACAATGCAGTTCGAGCTGAGGTTGGGGTCGATCCAGTCTTTTGGGATGAAGAACTTGCAAAGTATGCTCAAAATTATCTCGATTCAAAGGTTTCAACGTGTGAGATGGTGCACTCCAATGGGCCTTATGGTGAGAACCTAGCAACGCTAGATGGTTTGTTGACAGCGGCAGCTGCAGTACAGGCATGGGCGGATGAGAAGAAATACTATGACCATAATTCCAACACGTGCGTCGGGGGAGAGTGTCGCCATTACACCCAATTGGTCTGGAAGAACAGTTTCTTAATAGGGTGTGCCAATATCAAGTGCAAAAACAATTGGTCTTTGGTCTCATGCAATTATAGTCCTGCTGGTAATGTTGCTGGAGAGCTACCTTATTAG

Protein sequence

MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY
Homology
BLAST of Cmc01g0004461 vs. NCBI nr
Match: XP_008455067.1 (PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa] >TYK06839.1 pathogenesis-related protein 1A-like [Cucumis melo var. makuwa])

HSP 1 Score: 341.7 bits (875), Expect = 3.6e-90
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 60
           MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 120
           NYL+SKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Cmc01g0004461 vs. NCBI nr
Match: XP_004137082.3 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 324.7 bits (831), Expect = 4.5e-85
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTL-IPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYA 60
           MS MALSN PSSICLIMLTL IPMIVAHNTPQNYVDAHNAVRAEVG DPVFWDEELAKYA
Sbjct: 25  MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 84

Query: 61  QNYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECR 120
           QNYLDSK+STCEMVHSNG YGENLATLDGLLTAAAAV+AWADEKKYYDHNSN CVGGECR
Sbjct: 85  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 144

Query: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNV GELPY
Sbjct: 145 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 187

BLAST of Cmc01g0004461 vs. NCBI nr
Match: XP_038886847.1 (pathogenesis-related protein 1A-like [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 1.5e-80
Identity = 142/162 (87.65%), Postives = 152/162 (93.83%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 60
           MSKM+LSNI SSICLIMLT IPM +AHNTPQ+YVDAHNAVRAEVG DPVFWDEELA YA 
Sbjct: 1   MSKMSLSNILSSICLIMLTFIPMFLAHNTPQHYVDAHNAVRAEVGADPVFWDEELATYAN 60

Query: 61  NYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 120
           NYL++K++TCEMVHS GPYGENLATLDGLLTAAAAVQAWADEKKYYDH SNTCVGGECRH
Sbjct: 61  NYLETKIATCEMVHSKGPYGENLATLDGLLTAAAAVQAWADEKKYYDHKSNTCVGGECRH 120

Query: 121 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           YTQLVWK SFLIGCAN+KCKN+W+LVSCNYSPAGNV GELPY
Sbjct: 121 YTQLVWKKSFLIGCANVKCKNHWTLVSCNYSPAGNVPGELPY 162

BLAST of Cmc01g0004461 vs. NCBI nr
Match: KAE8645836.1 (hypothetical protein Csa_017290 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 1.7e-79
Identity = 145/153 (94.77%), Postives = 148/153 (96.73%), Query Frame = 0

Query: 4   MALSNIPSSICLIMLTL-IPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNY 63
           MALSN PSSICLIMLTL IPMIVAHNTPQNYVDAHNAVRAEVG DPVFWDEELAKYAQNY
Sbjct: 1   MALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYAQNY 60

Query: 64  LDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYT 123
           LDSK+STCEMVHSNG YGENLATLDGLLTAAAAV+AWADEKKYYDHNSN CVGGECRHYT
Sbjct: 61  LDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECRHYT 120

Query: 124 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGN 156
           QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAG+
Sbjct: 121 QLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGS 153

BLAST of Cmc01g0004461 vs. NCBI nr
Match: XP_004137081.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus])

HSP 1 Score: 251.5 bits (641), Expect = 4.8e-63
Identity = 109/159 (68.55%), Postives = 133/159 (83.65%), Query Frame = 0

Query: 4   MALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYL 63
           MAL+   S++C++ L L P+++A N+PQ++ DAHNAVRA+VG +P+FWDEEL  YA+NY+
Sbjct: 1   MALATTLSALCIVALALTPIVIAQNSPQDFFDAHNAVRAKVGAEPLFWDEELEAYAKNYI 60

Query: 64  DSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQ 123
            SK+ TCEMVH  GPYGENLAT + +LTAAA+V  WA EKKYY+HNSN C GGECRHY Q
Sbjct: 61  TSKIKTCEMVHFVGPYGENLATANPVLTAAASVNTWAAEKKYYNHNSNKCEGGECRHYRQ 120

Query: 124 LVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           LVWKNSFL+GCA +KCKNNWSLVSCNYSP+GNV GE PY
Sbjct: 121 LVWKNSFLVGCATVKCKNNWSLVSCNYSPSGNVVGERPY 159

BLAST of Cmc01g0004461 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 9.5e-46
Identity = 76/143 (53.15%), Postives = 101/143 (70.63%), Query Frame = 0

Query: 20  LIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEMVHSNGPY 79
           LI    A N+PQ+Y++ HNA R +VGV P+ WD  LA YAQNY + ++  C M+HS+GPY
Sbjct: 17  LIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGPY 76

Query: 80  GENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVWKNSFLIGCANIKC 139
           GENLA     L AA AV+ W DEK++YD+NSN+CVGG C HYTQ+VW+NS  +GCA ++ 
Sbjct: 77  GENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVRS 136

Query: 140 KNNWSLVSCNYSPAGNVAGELPY 163
            N W  ++CNY P GN  G+ P+
Sbjct: 137 NNGWFFITCNYDPPGNFIGQRPF 159

BLAST of Cmc01g0004461 vs. ExPASy Swiss-Prot
Match: P09042 (Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3)

HSP 1 Score: 178.3 bits (451), Expect = 6.8e-44
Identity = 82/159 (51.57%), Postives = 111/159 (69.81%), Query Frame = 0

Query: 11  SSICLIMLTLIPMIVAH-----NTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDS 70
           SS  L+   L+ +I++H     N+ Q+Y+DAHN  RA+VGV+P+ WD+++A YAQNY   
Sbjct: 10  SSFFLVSTLLLFLIISHSCHAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQ 69

Query: 71  KVSTCEMVHSNGPYGENLATLDG-LLTAAAAVQAWADEKKYYDHNSNTCVGGE-CRHYTQ 130
             + C +VHS+G YGENLA   G  LTAA AV+ W +EK+YY H+SNTC  G+ C HYTQ
Sbjct: 70  LAADCNLVHSHGQYGENLAWGSGDFLTAAKAVEMWVNEKQYYAHDSNTCAQGQVCGHYTQ 129

Query: 131 LVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           +VW+NS  +GCA ++C N   +VSCNY P GNV G+ PY
Sbjct: 130 VVWRNSVRVGCARVQCNNGGYIVSCNYDPPGNVIGKSPY 168

BLAST of Cmc01g0004461 vs. ExPASy Swiss-Prot
Match: Q9ZNS4 (Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.0e-39
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 0

Query: 11  SSICLIMLTLIPMIV----AHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSK 70
           S I +I+  L+  +V    A ++ Q+YV+AHN  R+++GV P+ WDE LA YA+NY +  
Sbjct: 7   SRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQL 66

Query: 71  VSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVW 130
              C +VHS GPYGENLA   G L+  AAV  W +EK  Y++++NTC  G C HYTQ+VW
Sbjct: 67  KGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVW 126

Query: 131 KNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           +NS  +GCA ++C N  +++SCNY P GN A + PY
Sbjct: 127 RNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

BLAST of Cmc01g0004461 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.3e-39
Identity = 76/153 (49.67%), Postives = 100/153 (65.36%), Query Frame = 0

Query: 13  ICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEM 72
           +C++ L ++   VA N+PQ+YVDAHNA R+ V V PV WDE +A +A+ Y  S+   C +
Sbjct: 15  VCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGDCRL 74

Query: 73  VHSNGP-YGENLATLDGL-LTAAAAVQAWADEKKYYDHNSNTCVGGE-CRHYTQLVWKNS 132
           VHS  P YGENLA   G  LT   AV  W  E+  Y+ N+NTC  G+ C HYTQ+VW+NS
Sbjct: 75  VHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVWRNS 134

Query: 133 FLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
             IGCA ++C N    ++CNYSP GN AG+ PY
Sbjct: 135 VRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

BLAST of Cmc01g0004461 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.3e-39
Identity = 70/143 (48.95%), Postives = 94/143 (65.73%), Query Frame = 0

Query: 14  CLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEMV 73
           C I   +     A    +N+++AHNA R  VGV P+ WD+ LA YAQNY + +   C M+
Sbjct: 9   CFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMI 68

Query: 74  HSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGE-CRHYTQLVWKNSFLI 133
           HS+GPYGENLA     L AA AV+ W DEK++YD+NSNTC  G+ C HYTQ+VW+ S  +
Sbjct: 69  HSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRL 128

Query: 134 GCANIKCKNNWSLVSCNYSPAGN 156
           GCA ++C + W  ++CNY P GN
Sbjct: 129 GCARVRCNSGWVFITCNYDPPGN 151

BLAST of Cmc01g0004461 vs. ExPASy TrEMBL
Match: A0A5D3C911 (Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001430 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.7e-90
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 60
           MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 120
           NYL+SKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Cmc01g0004461 vs. ExPASy TrEMBL
Match: A0A1S3C055 (pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.7e-90
Identity = 161/162 (99.38%), Postives = 162/162 (100.00%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 60
           MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ
Sbjct: 26  MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 85

Query: 61  NYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 120
           NYL+SKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH
Sbjct: 86  NYLESKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 145

Query: 121 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY
Sbjct: 146 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 187

BLAST of Cmc01g0004461 vs. ExPASy TrEMBL
Match: A0A0A0K4C6 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.2e-85
Identity = 154/163 (94.48%), Postives = 156/163 (95.71%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTL-IPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYA 60
           MS MALSN PSSICLIMLTL IPMIVAHNTPQNYVDAHNAVRAEVG DPVFWDEELAKYA
Sbjct: 1   MSNMALSNFPSSICLIMLTLTIPMIVAHNTPQNYVDAHNAVRAEVGADPVFWDEELAKYA 60

Query: 61  QNYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECR 120
           QNYLDSK+STCEMVHSNG YGENLATLDGLLTAAAAV+AWADEKKYYDHNSN CVGGECR
Sbjct: 61  QNYLDSKISTCEMVHSNGSYGENLATLDGLLTAAAAVKAWADEKKYYDHNSNKCVGGECR 120

Query: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNV GELPY
Sbjct: 121 HYTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVVGELPY 163

BLAST of Cmc01g0004461 vs. ExPASy TrEMBL
Match: A0A6J1D6J4 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017385 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 2.0e-54
Identity = 104/162 (64.20%), Postives = 125/162 (77.16%), Query Frame = 0

Query: 1   MSKMALSNIPSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQ 60
           MSKMA      +I LI LTL  +  A NTP +++ AH   R EVG   +FWD+E+A YA+
Sbjct: 1   MSKMASL---FTIFLIGLTLSSIARAQNTPDDFLKAHKKFRDEVGASEMFWDDEVAAYAK 60

Query: 61  NYLDSKVSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRH 120
            Y +SK+ TCEMVHS+  YGENLAT++G LTA  AVQAWADEKK YD+N+N CVGGECRH
Sbjct: 61  RYAESKIDTCEMVHSDTHYGENLATVNGDLTAEMAVQAWADEKKXYDYNANKCVGGECRH 120

Query: 121 YTQLVWKNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           YTQLVWK+SFL+GCA +KCKNNW+L+SCNYSP GNV GE PY
Sbjct: 121 YTQLVWKDSFLLGCATVKCKNNWTLISCNYSPTGNVVGEKPY 159

BLAST of Cmc01g0004461 vs. ExPASy TrEMBL
Match: A0A6J1D615 (basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673 GN=LOC111017366 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.4e-52
Identity = 95/151 (62.91%), Postives = 114/151 (75.50%), Query Frame = 0

Query: 12  SICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCE 71
           +ICL+   + P+ +A N+PQ++VD HNAVRAEVGV PV WD  LA YAQNY +SK  TCE
Sbjct: 13  TICLVGFLIAPLSMAQNSPQDFVDTHNAVRAEVGVWPVSWDATLAAYAQNYANSKSETCE 72

Query: 72  MVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVWKNSFL 131
           MVHSNGPYGENLA   G +TA  AV+ WA EKK+YDH +N CVG EC HYTQ+VW++S  
Sbjct: 73  MVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIVWRDSKR 132

Query: 132 IGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           IGCA +KC+NNW  V CNY P GN  G+LPY
Sbjct: 133 IGCARVKCENNWVFVICNYDPPGNYIGQLPY 163

BLAST of Cmc01g0004461 vs. TAIR 10
Match: AT1G50060.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 164.5 bits (415), Expect = 7.3e-41
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = 0

Query: 10  PSSICLIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVST 69
           P  + + +  L+    A NTPQ+Y+++HN  RA+VGV  V WD  LA YA NY + + + 
Sbjct: 7   PFLVIVAISFLVVATNAQNTPQDYLNSHNTARAQVGVPNVVWDTTLAAYALNYSNFRKAD 66

Query: 70  CEMVHSNGPYGENLAT-LDGLLTAAAAVQAWADEKKYYDHNSNTCVGG-ECRHYTQLVWK 129
           C +VHSNGPYGENLA       +A +AV+ W DEK YY +  N C GG +C HYTQ+VW+
Sbjct: 67  CNLVHSNGPYGENLAKGSSSSFSAISAVKLWVDEKPYYSYAYNNCTGGKQCLHYTQVVWR 126

Query: 130 NSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           +S  IGCA ++C N W  VSCNY+  GN  GE PY
Sbjct: 127 DSVKIGCARVQCTNTWWFVSCNYNSPGNWVGEYPY 161

BLAST of Cmc01g0004461 vs. TAIR 10
Match: AT2G14580.1 (basic pathogenesis-related protein 1 )

HSP 1 Score: 164.5 bits (415), Expect = 7.3e-41
Identity = 74/156 (47.44%), Postives = 104/156 (66.67%), Query Frame = 0

Query: 11  SSICLIMLTLIPMIV----AHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSK 70
           S I +I+  L+  +V    A ++ Q+YV+AHN  R+++GV P+ WDE LA YA+NY +  
Sbjct: 7   SRILIILAALVGALVVPLKAQDSQQDYVNAHNQARSQIGVGPMQWDEGLAAYARNYANQL 66

Query: 71  VSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVW 130
              C +VHS GPYGENLA   G L+  AAV  W +EK  Y++++NTC  G C HYTQ+VW
Sbjct: 67  KGDCRLVHSRGPYGENLAKSGGDLSGVAAVNLWVNEKANYNYDTNTC-NGVCGHYTQVVW 126

Query: 131 KNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           +NS  +GCA ++C N  +++SCNY P GN A + PY
Sbjct: 127 RNSVRLGCAKVRCNNGGTIISCNYDPPGNYANQKPY 161

BLAST of Cmc01g0004461 vs. TAIR 10
Match: AT3G19690.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 9.5e-41
Identity = 68/151 (45.03%), Postives = 103/151 (68.21%), Query Frame = 0

Query: 15  LIMLTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEMVH 74
           L+ + L    +A +  Q +++AHN  R EVG+DP+ WD+E+A YA +Y + +++ C +VH
Sbjct: 11  LLAIALFYGSLAEDLQQQFLEAHNEARNEVGLDPLVWDDEVAAYAASYANQRINDCALVH 70

Query: 75  SNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTC---VGGECRHYTQLVWKNSFL 134
           SNGP+GEN+A   G ++A  A + W +EK+YYD++SNTC    GG C HYTQ+VWKN+  
Sbjct: 71  SNGPFGENIAMSSGEMSAEDAAEMWINEKQYYDYDSNTCNDPNGGTCLHYTQVVWKNTVR 130

Query: 135 IGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           +GCA + C +  + ++CNY P GN  GE P+
Sbjct: 131 LGCAKVVCNSGGTFITCNYDPPGNYIGEKPF 161

BLAST of Cmc01g0004461 vs. TAIR 10
Match: AT4G33720.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 2.1e-40
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 0

Query: 18  LTLIPMIVAHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSKVSTCEMVHSNG 77
           L LI  + A ++PQ+++  HN  RAEVGV P+ WDE++A YA+NY + +   C M HS+G
Sbjct: 18  LVLIVHLKAQDSPQDFLAVHNRARAEVGVGPLRWDEKVAAYARNYANQRKGDCAMKHSSG 77

Query: 78  PYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCV-GGECRHYTQLVWKNSFLIGCAN 137
            YGEN+A   G +T  AAV  W DE+  YD++SNTC    +C HYTQ+VW+NS  +GCA 
Sbjct: 78  SYGENIAWSSGSMTGVAAVDMWVDEQFDYDYDSNTCAWDKQCGHYTQVVWRNSERLGCAK 137

Query: 138 IKCKNNWSLVSCNYSPAGNVAGELPY 163
           ++C N  + ++CNY P GN  GE PY
Sbjct: 138 VRCNNGQTFITCNYDPPGNWVGEWPY 163

BLAST of Cmc01g0004461 vs. TAIR 10
Match: AT2G14610.1 (pathogenesis-related gene 1 )

HSP 1 Score: 152.1 bits (383), Expect = 3.7e-37
Identity = 67/156 (42.95%), Postives = 96/156 (61.54%), Query Frame = 0

Query: 11  SSICLIMLTLIPMIV----AHNTPQNYVDAHNAVRAEVGVDPVFWDEELAKYAQNYLDSK 70
           S   ++ + L+  +V    A ++PQ+Y+  HN  R  VGV P+ WDE +A YA++Y +  
Sbjct: 7   SRFLIVFVALVGALVLPSKAQDSPQDYLRVHNQARGAVGVGPMQWDERVAAYARSYAEQL 66

Query: 71  VSTCEMVHSNGPYGENLATLDGLLTAAAAVQAWADEKKYYDHNSNTCVGGECRHYTQLVW 130
              C ++HS GPYGENLA   G L+  +AV  W  EK  Y++ +NTC  G C HYTQ+VW
Sbjct: 67  RGNCRLIHSGGPYGENLAWGSGDLSGVSAVNMWVSEKANYNYAANTC-NGVCGHYTQVVW 126

Query: 131 KNSFLIGCANIKCKNNWSLVSCNYSPAGNVAGELPY 163
           + S  +GCA ++C N  +++SCNY P GN   E PY
Sbjct: 127 RKSVRLGCAKVRCNNGGTIISCNYDPRGNYVNEKPY 161

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008455067.13.6e-9099.38PREDICTED: pathogenesis-related protein 1A-like [Cucumis melo] >KAA0031387.1 pat... [more]
XP_004137082.34.5e-8594.48basic form of pathogenesis-related protein 1 [Cucumis sativus][more]
XP_038886847.11.5e-8087.65pathogenesis-related protein 1A-like [Benincasa hispida][more]
KAE8645836.11.7e-7994.77hypothetical protein Csa_017290 [Cucumis sativus][more]
XP_004137081.14.8e-6368.55basic form of pathogenesis-related protein 1 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
P116709.5e-4653.15Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P090426.8e-4451.57Pathogenesis-related protein 1C OS=Nicotiana tabacum OX=4097 PE=2 SV=3[more]
Q9ZNS41.0e-3947.44Pathogenesis-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRB1 PE=2 SV=1[more]
Q413591.3e-3949.67Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
Q086972.3e-3948.95Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3C9111.7e-9099.38Pathogenesis-related protein 1A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... [more]
A0A1S3C0551.7e-9099.38pathogenesis-related protein 1A-like OS=Cucumis melo OX=3656 GN=LOC103495332 PE=... [more]
A0A0A0K4C62.2e-8594.48SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G070250 PE=4 SV... [more]
A0A6J1D6J42.0e-5464.20basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673... [more]
A0A6J1D6155.4e-5262.91basic form of pathogenesis-related protein 1-like OS=Momordica charantia OX=3673... [more]
Match NameE-valueIdentityDescription
AT1G50060.17.3e-4149.03CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14580.17.3e-4147.44basic pathogenesis-related protein 1 [more]
AT3G19690.19.5e-4145.03CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT4G33720.12.1e-4048.63CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro... [more]
AT2G14610.13.7e-3742.95pathogenesis-related gene 1 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 118..134
score: 54.8
coord: 145..158
score: 49.25
coord: 95..108
score: 40.45
coord: 49..67
score: 33.57
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 15..162
IPR014044CAP domainSMARTSM00198SCP_3coord: 28..158
e-value: 4.5E-46
score: 169.1
IPR014044CAP domainPFAMPF00188CAPcoord: 34..150
e-value: 2.2E-19
score: 70.5
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 28..162
e-value: 1.0E-40
score: 141.2
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 27..162
NoneNo IPR availablePANTHERPTHR10334:SF488PATHOGENESIS-RELATED PROTEIN 1coord: 15..162
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 30..162
e-value: 1.81285E-61
score: 184.374
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 119..129
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 145..156

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc01g0004461.1Cmc01g0004461.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region