Cmc01g0004281 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0004281
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	cysteine-rich and transmembrane domain-containing protein A-like
Location	CMiso1.1chr01: 926441 .. 928309 (-)
RNA-Seq Expression	Cmc01g0004281
Synteny	Cmc01g0004281

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAAGGCATAAAAAAGTCCGCATTCTTTATTCTTTGATTGTCTTTATAGTTTATAGAGCTCTCGTCTCTTTGTGTTTCCAACTAAGAAAATCAAAACAGAAGAAAGAAAATATGAGTAGTTACTACGCCCAACCACCGCCTCCCGTCGGCGTTCCTCCCCCGCAGGGTAACGTCTAAAAACCCTCACTCTTCACTTTTTTTCCAATTCTTAGATCCAAATCCCATGGATCGTACTGTTCTTTTTTTCCGCAAAACTCATCTGCTAGCTAGTTGTTTGATTTGACCGATCTTGACGATTTTAGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCACAAGGATATCCACCGCAGGGTGGTTATCCACCTGCCGGTTATCCTCCGCAGGGATACCCGCCTCAGCCGCCGTATGGTCCGGCGTACGGTGGTCATCCTCCTCCGCAATATCAAAATAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGGTGGTAAGTCTCTATTTCTGTTTTAGTAAGTCTGTATGGATTGTTGTGCGGCGGCGGTTTTAGTTTTGGAATTTTTGTTTTGTCGTTGGGGAATGTGGAGACGATCCAAATCGGTGATGGCTGACACAGGGTGGAAAGTTCTTCTTTTTTCACATGAACAATAAGCGCAATTTTTGGGTCTTTTTTTTTTTCCTTTTGATCTTTTTCTGCTTTCTTTTTGTATAAAATATACTTTTCTTATTTAAAATAATAAAACCTTTATAAATTCAAATTTTGAAGGGACTTTATTTTAGAAAAATGATTTTAAAATAACAAAATAGATAAAAAAAAAAATATTTACAAAATATTACATTACATAGATAGAAGTTTAACTATAATATATATACATATATATTTAGTATATAGAATTTAGAATTTTTTTAAAATTTTGCTATCTTTTGTAAATATTTTGATCCATTTTAACGTAGATTTGAAGATGTCTTTTTATTTTATTTATTTATTATTACTATTATACTATATTTATACATCAATCAAGATATAAATTAAATGGATATGTTTTAAACAAAAATGAACAAAAGTAAAAAGATTTCAAATTAACCGAGAGATAGACATAGACTCAATAACTAACTAAGAGGTCGGGTAGGTTATCTTATATTAGAACTAGTTGAACTATGTATAAGTTGACTCGAACACTCACGGTATATAAAAAAAATTCCATAAAACAAAATCATGAAAGACAAAATTTATTATACTTGATTTATTTTTCTATAAAGTGTAAATATTTTGTCAAATGTTCTATTTTTTACCATTTTTTGTTCAAAACCAAAACAAGATAAAACGTTTATTATTTATATTATATATATTCACGTAGATATAAAAATATCAATAAAAAATGAAATTACATCTTTTTTAGCCGATAGTTTTTAGGAATGTATTTTGTACCTAAAGTTTTAATTTCATAACGGTTTTAGTAGTTAGTTTGGACGTTGAATTGAATTGGATATGATAGCTTGAAAGGGTAAACAAATTATTTTTTTCGAAAAACAAAATTAGGTTGGACAAATTTCACTTTCCCTCTCAATTTTGATAACTACATAGTTTGCTATTATTATTACTATGATGAGATGATGAAGAAGAAGAAGAAAGAAAAGGCTCTAAATTTGGTTTGTAAATTTTGCAGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATTATATTGATGACAAAGTATATAAAGCTGGGGGGCTCTTTGATTATATTGATGAACTTTAAATCTCCATTATGTTCATTTTATCTTTTTTTGTCAGTGTGTAATATCCATATAATATGTTTCTATATCCCTCATTTATATATATA

mRNA sequence

TAAAAAAGGCATAAAAAAGTCCGCATTCTTTATTCTTTGATTGTCTTTATAGTTTATAGAGCTCTCGTCTCTTTGTGTTTCCAACTAAGAAAATCAAAACAGAAGAAAGAAAATATGAGTAGTTACTACGCCCAACCACCGCCTCCCGTCGGCGTTCCTCCCCCGCAGGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCACAAGGATATCCACCGCAGGGTGGTTATCCACCTGCCGGTTATCCTCCGCAGGGATACCCGCCTCAGCCGCCGTATGGTCCGGCGTACGGTGGTCATCCTCCTCCGCAATATCAAAATAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGGTGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGATTATATTGATGACAAAGTATATAAAGCTGGGGGGCTCTTTGATTATATTGATGAACTTTAAATCTCCATTATGTTCATTTTATCTTTTTTTGTCAGTGTGTAATATCCATATAATATGTTTCTATATCCCTCATTTATATATATA

Coding sequence (CDS)

ATGAGTAGTTACTACGCCCAACCACCGCCTCCCGTCGGCGTTCCTCCCCCGCAGGGTTATCCGCCGCAAGGATATCCTCCGAAGGACGCTTATCCGCCACAAGGATATCCACCGCAGGGTGGTTATCCACCTGCCGGTTATCCTCCGCAGGGATACCCGCCTCAGCCGCCGTATGGTCCGGCGTACGGTGGTCATCCTCCTCCGCAATATCAAAATAACCAAAAGAAAGAAGTTGGATTCGTCGAAGGGTGTTTGGCTGCTCTTTGTTGCTGCTTTATGTTGGATGTTTGCTTTTGA

Protein sequence

MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF

Homology

[Close]

BLAST of Cmc01g0004281 vs. NCBI nr
Match: XP_008455047.1 (PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 3.1e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP
Sbjct: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF
Sbjct: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 98

[Close]

BLAST of Cmc01g0004281 vs. NCBI nr
Match: XP_011658867.1 (cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus] >KGN43843.1 hypothetical protein Csa_017085 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          M+SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP PPYGP
Sbjct: 1  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          AYG HPPPQ+Q NQKKEVGFVEGCLAALCCCFMLDVCF
Sbjct: 61 AYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of Cmc01g0004281 vs. NCBI nr
Match: KAA0031373.1 (cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa] >TYK06825.1 cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo var. makuwa])

HSP 1 Score: 172.2 bits (435), Expect = 2.3e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP
Sbjct: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEG 84
          AYGGHPPPQYQNNQKKEVGFVEG
Sbjct: 61 AYGGHPPPQYQNNQKKEVGFVEG 83

[Close]

BLAST of Cmc01g0004281 vs. NCBI nr
Match: XP_038888465.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa hispida])

HSP 1 Score: 168.3 bits (425), Expect = 3.3e-38
Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 0


Query: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62
          SYYAQPPPPVGVPPPQG+PPQGYPPKD YPP GYPPQGGYPPAGYPPQG+PP P Y PAY
Sbjct: 2  SYYAQPPPPVGVPPPQGFPPQGYPPKDGYPPPGYPPQGGYPPAGYPPQGHPPPPAYAPAY 61

Query: 63 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
           GHPPP +Q NQKKEVGFVEGCLAALCCCFMLDVCF
Sbjct: 62 -GHPPPHHQ-NQKKEVGFVEGCLAALCCCFMLDVCF 95

[Close]

BLAST of Cmc01g0004281 vs. NCBI nr
Match: XP_022952198.1 (cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata])

HSP 1 Score: 165.2 bits (417), Expect = 2.8e-37
Identity = 85/96 (88.54%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP P YGPAY
Sbjct: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAY 61

Query: 63 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          G  PP    +NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 62 G--PPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 94

[Close]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot
Match: Q8S8M0 (Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis thaliana OX=3702 GN=WIH2 PE=1 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 8.7e-26
Identity = 68/96 (70.83%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 10 PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPPQ---PPYGPAY 69
          PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP Q   PPY P Y
Sbjct: 7  PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQY 66

Query: 70 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
             PPPQ+Q  Q+   GF+EGCLAALCCC +LD CF
Sbjct: 67 --PPPPQHQ-QQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot
Match: Q8LCL8 (Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thaliana OX=3702 GN=At3g57160 PE=3 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.5e-17
Identity = 59/102 (57.84%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 6   AQPPPPVGVPPPQGYPPQGYPPKDAYPP-------QGYPPQGGYPPAGYPPQGYPPQ--P 65
           +Q PP VGVPP   YP +G PPKDAYPP       QGYPP  GYP  GYPPQGYPPQ  P
Sbjct: 2   SQQPPAVGVPPSHAYPAEG-PPKDAYPPPGQPYPQQGYPPPQGYPQQGYPPQGYPPQGYP 61

Query: 66  PYGPAYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
             G    G+ PPQ Q  QK   G +EGC+AALCC  +LD CF
Sbjct: 62  EQGYPQQGY-PPQQQQQQKHSPGMLEGCIAALCCYCVLDACF 101

[Close]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot
Match: Q9FJW3 (Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis thaliana OX=3702 GN=WIH1 PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 7.4e-17
Identity = 56/96 (58.33%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 5  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAYGG 64
          Y Q   PVG P     PPQGYPPKD YPP GYPP  GYPP GY  QGYP Q        G
Sbjct: 2  YHQEQHPVGAP-----PPQGYPPKDGYPPAGYPP-AGYPPPGY-AQGYPAQ--------G 61

Query: 65 HPPPQYQN--NQKKEVGFVEGCLAALCCCFMLDVCF 99
          +PPPQY     QK+  G +EGCLAALCCC +LD CF
Sbjct: 62 YPPPQYSQAPQQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot
Match: P09241 (Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 3.9e-10
Identity = 48/75 (64.00%), Postives = 50/75 (66.67%), Query Frame = 0


Query: 1   MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAY-PPQGYPPQGGYPPAGYPPQGYPPQ--PP 60
           M +  A   PP   PPPQGYPPQGYPP+ AY PPQGYPPQ GYPP GYPPQGYPPQ  PP
Sbjct: 380 MQAQQAAYQPP---PPPQGYPPQGYPPQGAYPPPQGYPPQ-GYPPQGYPPQGYPPQGAPP 439

Query: 61  YGPAYGGHPPPQYQN 73
              A  G PP    N
Sbjct: 440 QVEAPQGAPPQGVDN 450

[Close]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot
Match: P24603 (Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 6.7e-10
Identity = 44/63 (69.84%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 16  PPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAYGGHP----PPQYQ 75
           PPQGYPPQGYPP    PPQGYPPQ GYPP GYPPQGYPP PP GP   G P    PPQ  
Sbjct: 391 PPQGYPPQGYPPP---PPQGYPPQ-GYPPQGYPPQGYPP-PPQGPPPQGPPPQAAPPQGV 448

[Close]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL
Match: A0A1S3BZZ2 (cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo OX=3656 GN=LOC103495315 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.5e-49
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP
Sbjct: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF
Sbjct: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 98

[Close]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL
Match: A0A0A0K2W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 6.6e-45
Identity = 93/98 (94.90%), Postives = 95/98 (96.94%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          M+SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP PPYGP
Sbjct: 1  MTSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPPPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          AYG HPPPQ+Q NQKKEVGFVEGCLAALCCCFMLDVCF
Sbjct: 61 AYGHHPPPQHQ-NQKKEVGFVEGCLAALCCCFMLDVCF 97

[Close]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL
Match: A0A5A7SME1 (Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001290 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.1e-39
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0


Query: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60
          MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP
Sbjct: 1  MSSYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGP 60

Query: 61 AYGGHPPPQYQNNQKKEVGFVEG 84
          AYGGHPPPQYQNNQKKEVGFVEG
Sbjct: 61 AYGGHPPPQYQNNQKKEVGFVEG 83

[Close]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL
Match: A0A6J1GJV9 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita moschata OX=3662 GN=LOC111454944 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.3e-37
Identity = 85/96 (88.54%), Postives = 87/96 (90.62%), Query Frame = 0


Query: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP P YGPAY
Sbjct: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPP-PAYGPAY 61

Query: 63 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
          G  PP    +NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 62 G--PPQPQHSNQKKEVGFVEGCLAALCCCFVLDVCF 94

[Close]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL
Match: A0A6J1I9Y5 (cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita maxima OX=3661 GN=LOC111470998 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.4e-34
Identity = 81/96 (84.38%), Postives = 82/96 (85.42%), Query Frame = 0


Query: 3  SYYAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAY 62
          SYY QPPPPVGVPPPQGYPPQGYPPKDAYPP GYPPQGGYPPAGYPPQGYPP P YGP  
Sbjct: 2  SYYNQPPPPVGVPPPQGYPPQGYPPKDAYPPPGYPPQGGYPPAGYPPQGYPP-PAYGPPQ 61

Query: 63 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
            HP      NQKKEVGFVEGCLAALCCCF+LDVCF
Sbjct: 62 PQHP------NQKKEVGFVEGCLAALCCCFVLDVCF 90

[Close]

BLAST of Cmc01g0004281 vs. TAIR 10
Match: AT2G41420.1 (proline-rich family protein )

HSP 1 Score: 117.5 bits (293), Expect = 6.2e-27
Identity = 68/96 (70.83%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 10 PPVGVPPPQGYPPQGYPPKDAYPPQGYPPQG----GYPPAGYPPQGYPPQ---PPYGPAY 69
          PPVGVPPPQGYPP+GY PKDAYPPQGYPPQG    GYPP GYP QGYP Q   PPY P Y
Sbjct: 7  PPVGVPPPQGYPPEGY-PKDAYPPQGYPPQGYPQQGYPPQGYPQQGYPQQGYPPPYAPQY 66

Query: 70 GGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
             PPPQ+Q  Q+   GF+EGCLAALCCC +LD CF
Sbjct: 67 --PPPPQHQ-QQQSSPGFLEGCLAALCCCCLLDACF 98

[Close]

BLAST of Cmc01g0004281 vs. TAIR 10
Match: AT3G49845.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 88.2 bits (217), Expect = 4.0e-18
Identity = 55/113 (48.67%), Postives = 65/113 (57.52%), Query Frame = 0


Query: 9   PPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYP-------------------- 68
           PPP G PP +GYPP GYPP   YPP  Y PQ GYPPAGYP                    
Sbjct: 13  PPPQGYPPKEGYPPAGYPPPAGYPPPQY-PQAGYPPAGYPPPQQGYGQGYPAQGYPPPQY 72

Query: 69  PQGYPPQPPY---GPAYGGHPPPQYQNNQKKEVGFVEGCLAALCCCFMLDVCF 99
           PQG+PPQ PY    P + G  PP+ + ++K   GF+EGCLA LCCC +L+ CF
Sbjct: 73  PQGHPPQYPYQGPPPPHYGQAPPKNKKDKKDSGGFMEGCLAMLCCCVLLEACF 124

[Close]

BLAST of Cmc01g0004281 vs. TAIR 10
Match: AT5G67600.1 (unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G49845.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18
Identity = 56/96 (58.33%), Postives = 60/96 (62.50%), Query Frame = 0


Query: 5  YAQPPPPVGVPPPQGYPPQGYPPKDAYPPQGYPPQGGYPPAGYPPQGYPPQPPYGPAYGG 64
          Y Q   PVG P     PPQGYPPKD YPP GYPP  GYPP GY  QGYP Q        G
Sbjct: 2  YHQEQHPVGAP-----PPQGYPPKDGYPPAGYPP-AGYPPPGY-AQGYPAQ--------G 61

Query: 65 HPPPQYQN--NQKKEVGFVEGCLAALCCCFMLDVCF 99
          +PPPQY     QK+  G +EGCLAALCCC +LD CF
Sbjct: 62 YPPPQYSQAPQQKQNAGMLEGCLAALCCCCLLDACF 82

[Close]

BLAST of Cmc01g0004281 vs. TAIR 10
Match: AT5G45350.1 (proline-rich family protein )

HSP 1 Score: 60.5 bits (145), Expect = 8.9e-10
Identity = 48/104 (46.15%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 4   YYAQPP---PPVGVPPPQGYPPQGY-PPKDAYPPQGYPPQGGYPPA--GYPPQ----GYP 63
           ++  PP   PP G  PP GYP QGY PP  AYPP GYPP G YPPA  GYPP     GYP
Sbjct: 13  FHGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPP-GAYPPAPGGYPPAPGYGGYP 72

Query: 64  PQPPYG-----PAYGGHPPPQYQNNQKKEVGFVEGCLAALCCCF 93
           P P YG     P +GG+PP  Y  +     G + G +A     +
Sbjct: 73  PAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGMIAGAAAAY 115

[Close]

BLAST of Cmc01g0004281 vs. TAIR 10
Match: AT5G45350.2 (proline-rich family protein )

HSP 1 Score: 60.5 bits (145), Expect = 8.9e-10
Identity = 48/104 (46.15%), Postives = 56/104 (53.85%), Query Frame = 0


Query: 4   YYAQPP---PPVGVPPPQGYPPQGY-PPKDAYPPQGYPPQGGYPPA--GYPPQ----GYP 63
           ++  PP   PP G  PP GYP QGY PP  AYPP GYPP G YPPA  GYPP     GYP
Sbjct: 13  FHGYPPAGYPPPGAYPPAGYPQQGYPPPPGAYPPAGYPP-GAYPPAPGGYPPAPGYGGYP 72

Query: 64  PQPPYG-----PAYGGHPPPQYQNNQKKEVGFVEGCLAALCCCF 93
           P P YG     P +GG+PP  Y  +     G + G +A     +
Sbjct: 73  PAPGYGGYPPAPGHGGYPPAGYPAHHSGHAGGIGGMIAGAAAAY 115

The following BLAST results are available for this feature:

BLAST of Cmc01g0004281 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455047.1	3.1e-49	100.00	PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cuc...	[more]
XP_011658867.1	1.4e-44	94.90	cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]...	[more]
KAA0031373.1	2.3e-39	100.00	cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo v...	[more]
XP_038888465.1	3.3e-38	88.54	cysteine-rich and transmembrane domain-containing protein WIH2-like [Benincasa h...	[more]
XP_022952198.1	2.8e-37	88.54	cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita m...	[more]

BLAST of Cmc01g0004281 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8S8M0	8.7e-26	70.83	Cysteine-rich and transmembrane domain-containing protein WIH2 OS=Arabidopsis th...	[more]
Q8LCL8	2.5e-17	57.84	Cysteine-rich and transmembrane domain-containing protein B OS=Arabidopsis thali...	[more]
Q9FJW3	7.4e-17	58.33	Cysteine-rich and transmembrane domain-containing protein WIH1 OS=Arabidopsis th...	[more]
P09241	3.9e-10	64.00	Rhodopsin OS=Enteroctopus dofleini OX=267067 GN=RHO PE=2 SV=1	[more]
P24603	6.7e-10	69.84	Rhodopsin OS=Loligo forbesii OX=6618 GN=RHO PE=2 SV=1	[more]

BLAST of Cmc01g0004281 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZZ2	1.5e-49	100.00	cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A0A0K2W8	6.6e-45	94.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G070830 PE=4 SV=1	[more]
A0A5A7SME1	1.1e-39	100.00	Cysteine-rich and transmembrane domain-containing protein A-like OS=Cucumis melo...	[more]
A0A6J1GJV9	1.3e-37	88.54	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]
A0A6J1I9Y5	2.4e-34	84.38	cysteine-rich and transmembrane domain-containing protein WIH2-like OS=Cucurbita...	[more]

BLAST of Cmc01g0004281 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41420.1	6.2e-27	70.83	proline-rich family protein	[more]
AT3G49845.1	4.0e-18	48.67	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G67600.1	5.2e-18	58.33	unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures;...	[more]
AT5G45350.1	8.9e-10	46.15	proline-rich family protein	[more]
AT5G45350.2	8.9e-10	46.15	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00239	RHODOPSNTAIL	coord: 41..53 score: 39.74 coord: 16..27 score: 94.44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 8..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	PANTHER	PTHR31568:SF88	CYSTEINE-RICH AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN A-LIKE	coord: 3..98
IPR044850	Cysteine-rich and transmembrane domain-containing protein WIH1/2-like	PANTHER	PTHR31568	RCG49325, ISOFORM CRA_A	coord: 3..98

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0004281.1	Cmc01g0004281.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005886	plasma membrane