Cmc01g0003321 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc01g0003321
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cold regulated protein 27, putative isoform 2
Location	CMiso1.1chr01: 416229 .. 420386 (-)
RNA-Seq Expression	Cmc01g0003321
Synteny	Cmc01g0003321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATTTCTTTCACCGCTTCTCTCTCTCTCTCTCTTCGTTTCTCCACGAGCTTCAATCGCCAGAGGGTTTCGGACCTAAATTTTCTCCCAATTTTTCTATTTTTTCTTTGATTTCATCCTCCATTTTTGGCTCTTCCCGTATCATTTCTCCTTGTTTTTGATCCCTCCGAAATGGGTGACTCTCATACGCCGTCGTTTGTCTCGTCGCCGCTTGCAGATCGACAATCACCCATGCCGCCGGCCTCTTCTACTACTGACTCCACTGGCTTCAACTCTGAATCTCACTCTTCTTCCATTACTGTTGATGGGTCCAAGCGTTTTTTGGATTCTCATCATTGTTTGCAACTGGATGCGGTAAATTGTGATTCTCTCTTTTTTCGCAGGCTTGGTTTTTGTTTTTGTTTTTGTTTTTTTTCCCTCGGTATGAACGAGTTGTTTGTGGATTTTACCTTTTCCCCCCCTTTGAATGTAGCGTTAGGAGAGGACTAGGAGATCCTGCGACCTTTTCTTTGTTCTCTCGAAACTTATATGTCTGATTATCAATGATTCTGTTGCTTTTGTAGTGCCTTTAGAAATTTAATGGTAAGCTGGTTTTTGGGTATCTTCCATTTGGAGTTATTTTAAATTTGCAAGACGGGGGAGGTGTTTATGTACTTGCTTATAACTGCAGTTTTGAATCAGTTCCGTGTCTTTACCTTTTTTCTGTTTATTAATCCCCTTTTTCACCTTTGTGATTCAATGATTGTGGAGAAGAAATTCTTTTTGCAATGTTTGATTTATCGTTTATCTTTTCTGTTTGTATCAGTGTTTAGTGTTTATGTGTATTCAAGTTAATTCAGGGAGTAGTTTTGAATTAATTAGGTCGTGTTTGTGATCTATTTGGTTTTTGGTTTTTAGTTTTTGAAAACTAAGCCTATGCACTTTTTTCACCTCTACTTTTTATCAATGTTTTCAAAATCTGGCCAAATTATTGTGGAATGGTTTCATTAAATTATGGATCAAAGTCACGTCTTTCAAAATTTTCGTTAATGGAAATGGTTTCTCAATTGAATACTTGTGAACAGGAGCAAACACATTGGACAGACGAGAAACATAGATCATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGTATGCATGCTTTATCCTCAAAACAGAAGATGCGTCGAAAGCCGATCATGCTTGATACATCTTCTTCAGAGGTGAGGCAACACATCCACAAAAAGAGTGGGAGTGAGTTCCCTATCTCATTCCTCTACCTTCTTAATGATTCCCTCTTGTTATATGTTTTTTTTTTTAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGACACATAAGACACATGACGAACTCCTGTGGATCTGCCAGAAATTCACAGCAGACCCGTCCATGCTGTTTTAATTCTTATACAATCATTACAGGTAATTTGATCAGTGCCATATGTTCTTGAAAGTTTCATTTATATCTCTTTTAATTGGGTTCTTTATGTACTCTTTTCTTTTGTCTGGGTGGTACATAATCTACCCCTCAATCTCCTCTTATAGACACACCTGAACACATCGTTCATGTTTACCAAACCCCTTACTGGAGAAAGTTTTCCAGACTCTCACTTTTTGTTGAAGACCTTCTAATATACTAAAATTTGTAATCTATATTCTCAATACTCATTATGCATGTACACTTAACTGTGAATAGCCGTCTTCCAATCAAATTTTGTAATGGTGAAGGTGTTAGCTTTTGCAATAATTATTTTGGCTGTAGTATTTCCCTCTAGCACCATTTAGATGCACTCACTTTTCTGATTTAATTTTGTGTTGGTGTATCAATTTGACCATCACTTTGTGATGTTCCCACCTGGCATGCCACTGTACTGCATCAGTTGCTGTTCTGCAAATCTTCTTTCCAATATTATCACGTGTTTGCTTAAATTTTGTGTTCACCAAATGTATGACTTGAGCTTGTGAGTTGTAAAATCTGTAAGTCAAGCTTAGGATATTGTGTTATCTTCTTAGCAATGGAAATTCTACATGCTTTGATATATTAATTGGATAGTTCCAACGGTTTTCAGTGTTGTTATAGCTTTGTTCCCATAGCATGTTTTTAGTGTTTACAGATGCACACCAGGGTTACAAGATTTAACGTCATAATTCTCATGTTATTTCTCTACTAAGAATTCATGGATTAACTGATTGCATATCTTATTCATTTGAAGATCTTCGATCAGTATCTATAAGTGGAAAAGTACAAATCCTTTCTTTAAAGTTAAATGAGCATTTTTGTGCATTATATCAGTGGAAGAAACTATTAAAACTGAGTAGACATGTCTGGGATGGACTGCATTATGGATATTGATGAACTACTAGATGAAGCTAGGCTGATTTTACTAATTCTAGGACAGTAGCTGTTTAGGAATGAATCAAAACGGAAATTCAATAAGATTTTGGTCAACTTAGAGGAGCCATGAGGCATTCTTCTTTAGTGCATGAAAATGATCCCGACTGACAGAGCTACTTCAATATTGGAGTTGAACCAAGAGAAAAGAGCAGTTGTGGTCGTGGTGATACTCCAACATGTCTCAATTAGTGAGATTCTCGTGAAGATCTCTATTTCCCCTTTGAATATGTATAAATGTTCCTGAAGAGTAGAAAACCTGCTGAAGAATAATTTTATTGTTATGGGTCAAATAAACGAGATTATTCATAATTCTGCAAGCAATAACAAATAGATGCTTTAAAGCGAATAATGCTTGTCTAATTAAAGGACGAGATGCCAATGGGAAAGTTCTTCCTTTCCCATCTTAGGTGCATGCTACCGCACTTCATTGCAATGTTTAATGTGATTTCCTGTTGCAAACTAATTTGGTGTCTTTTATCTCTTCATTTTGTCTTCTATGCAGAAGTTTCGGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTGGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGGTTTTTTGGACAATGCCCAGGTTAATCATGGGACTGCCTTAGACTTTTCTTTGGATATCTTATACTTTCATCGTATAAATGATCCGAGACTGAATATGCTGCTATTGACCTCTTAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATCAAAAGCCAGATGGCATATTGTCTTCGGAGCATCCTCAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTCCTGTGTGAGAGGGAGCTGACAACAATTCATTCCAACATGTGAAAATACCTGGCTGTTCAAGCTCGTTAACCAAATGCGATACGGTTTTGTTTTCTTTTCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAAAAAATATGTTTGTATATGGTACAAACTAAACTTTTACCTAGTTCAAAATATTGAGTGAAATACATGTTAACCCTTTCTTTTCTCCTGTTTCCCTTTTTCTTAGAGTTTAAAAGGATGGAAATTCTACAACTAGATGTAGGGAAAGAATATACATGCTATAGAGAAGCTGCACACCCTGATAGTGAGATAGATACACAACCTTTTTAAATTTGTTTGAAATACTCTCATTATTAAGTTTTGTTAGAAACCTCAAGTGTAAATCATTACATAAATCAGAACGTGTCATTCTTTTGTGACACTGAAAGAGAGTTGAGCAAACTTATTGATTTTCTTTATGGGGTAAAGTTTTTTCATTGTATTGTTATCTTGTTGTAGTACTCTTGCTCAGTGATTTGATATTTGTTACTTTTGCTGGTTGCAGTTGTAATTTCTACTTCAACTTAGCTTCATCTAGATCTATTTTTCTCATTCTGCTTCTAGGTAACAACATTTGGGCTCAAGCAATTTTGAGGACATAATTACATAATGAAATAATAATACAGCGTTTCTCTTGTTATGAAGTGTATCTCAGATGGTTGATGACAATATACTTACAG

mRNA sequence

ACAAATTTCTTTCACCGCTTCTCTCTCTCTCTCTCTTCGTTTCTCCACGAGCTTCAATCGCCAGAGGGTTTCGGACCTAAATTTTCTCCCAATTTTTCTATTTTTTCTTTGATTTCATCCTCCATTTTTGGCTCTTCCCGTATCATTTCTCCTTGTTTTTGATCCCTCCGAAATGGGTGACTCTCATACGCCGTCGTTTGTCTCGTCGCCGCTTGCAGATCGACAATCACCCATGCCGCCGGCCTCTTCTACTACTGACTCCACTGGCTTCAACTCTGAATCTCACTCTTCTTCCATTACTGTTGATGGGTCCAAGCGTTTTTTGGATTCTCATCATTGTTTGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATCATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGTATGCATGCTTTATCCTCAAAACAGAAGATGCGTCGAAAGCCGATCATGCTTGATACATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGACACATAAGACACATGACGAACTCCTGTGGATCTGCCAGAAATTCACAGCAGACCCGTCCATGCTGTTTTAATTCTTATACAATCATTACAGAAGTTTCGGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTGGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGGTTTTTTGGACAATGCCCAGGTTGTACCATTTAAAAGATTATCCTAAAAAAGATCAAAAGCCAGATGGCATATTGTCTTCGGAGCATCCTCAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTCCTGTGTGAGAGGGAGCTGACAACAATTCATTCCAACATGTGAAAATACCTGGCTGTTCAAGCTCGTTAACCAAATGCGATACGGTTTTGTTTTCTTTTCAGAAGAGCATTGTAAAGAAAGTAAGGAAAGTGACAACAATAATTTTACCAGAAGATCTGCGGCAGTAAGGAAAAAATATGTTTGTATATGGTACAAACTAAACTTTTACCTAGTTCAAAATATTGAGTGAAATACATGTTAACCCTTTCTTTTCTCCTGTTTCCCTTTTTCTTAGAGTTTAAAAGGATGGAAATTCTACAACTAGATGTAGGGAAAGAATATACATGCTATAGAGAAGCTGCACACCCTGATAGTGAGATAGATACACAACCTTTTTAAATTTGTTTGAAATACTCTCATTATTAAGTTTTGTTAGAAACCTCAAGTGTAAATCATTACATAAATCAGAACGTGTCATTCTTTTGTGACACTGAAAGAGAGTTGAGCAAACTTATTGATTTTCTTTATGGGGTAAAGTTTTTTCATTGTATTGTTATCTTGTTGTAGTACTCTTGCTCAGTGATTTGATATTTGTTACTTTTGCTGGTTGCAGTTGTAATTTCTACTTCAACTTAGCTTCATCTAGATCTATTTTTCTCATTCTGCTTCTAGGTAACAACATTTGGGCTCAAGCAATTTTGAGGACATAATTACATAATGAAATAATAATACAGCGTTTCTCTTGTTATGAAGTGTATCTCAGATGGTTGATGACAATATACTTACAG

Coding sequence (CDS)

ATGGGTGACTCTCATACGCCGTCGTTTGTCTCGTCGCCGCTTGCAGATCGACAATCACCCATGCCGCCGGCCTCTTCTACTACTGACTCCACTGGCTTCAACTCTGAATCTCACTCTTCTTCCATTACTGTTGATGGGTCCAAGCGTTTTTTGGATTCTCATCATTGTTTGCAACTGGATGCGGAGCAAACACATTGGACAGACGAGAAACATAGATCATATCTTGATTCTTTAGAAGCATCTTTTGTCCAAGGTTTGCATCAACATAGGCGTATGCATGCTTTATCCTCAAAACAGAAGATGCGTCGAAAGCCGATCATGCTTGATACATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCTTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGATAAGACTGCTGATTCTCCTGCTATTTTAGAGGATCTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTAGTTTGGAAACTCCTGATCTCCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGACACATAAGACACATGACGAACTCCTGTGGATCTGCCAGAAATTCACAGCAGACCCGTCCATGCTGTTTTAATTCTTATACAATCATTACAGAAGTTTCGGATCAAAACTTTGTGGATAATCAACCAGGAGAGTTGTCTGGTGGCATGCCTATTGCAAAAAGATTAAAGAAAGCTTCTTCTGGTTTTTTGGACAATGCCCAGGTTGTACCATTTAAAAGATTATCCTAA

Protein sequence

MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGFLDNAQVVPFKRLS

Homology

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BLAST of Cmc01g0003321 vs. NCBI nr
Match: XP_008454952.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo])

HSP 1 Score: 508.8 bits (1309), Expect = 2.6e-140
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LDNAQVVPFKRLS 254
           LDNAQVVPFKRLS
Sbjct: 241 LDNAQVVPFKRLS 253

[Close]

BLAST of Cmc01g0003321 vs. NCBI nr
Match: KAA0031301.1 (Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK06753.1 Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa])

HSP 1 Score: 494.2 bits (1271), Expect = 6.7e-136
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LDNAQ 246
           LDNAQ
Sbjct: 241 LDNAQ 245

[Close]

BLAST of Cmc01g0003321 vs. NCBI nr
Match: XP_004136978.1 (cold-regulated protein 27 isoform X1 [Cucumis sativus])

HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124
Identity = 229/253 (90.51%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLD
Sbjct: 1   MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           R+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMPIAKRLKKASS F
Sbjct: 181 RYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDF 240

Query: 241 LDNAQVVPFKRLS 254
            D+AQVVPFKRLS
Sbjct: 241 SDSAQVVPFKRLS 253

[Close]

BLAST of Cmc01g0003321 vs. NCBI nr
Match: XP_008454953.1 (PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo])

HSP 1 Score: 404.1 bits (1037), Expect = 9.1e-109
Identity = 212/253 (83.79%), Postives = 215/253 (84.98%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSE+     
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEV----- 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
               + +I                       H  S  KQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ----RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 221

Query: 241 LDNAQVVPFKRLS 254
           LDNAQVVPFKRLS
Sbjct: 241 LDNAQVVPFKRLS 221

[Close]

BLAST of Cmc01g0003321 vs. NCBI nr
Match: XP_038887003.1 (cold-regulated protein 27 isoform X1 [Benincasa hispida])

HSP 1 Score: 359.0 bits (920), Expect = 3.4e-95
Identity = 192/255 (75.29%), Postives = 210/255 (82.35%), Query Frame = 0


Query: 1   MGDSHTPSFVS-SPLAD-RQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQ 60
           MG SHT S +S  PL D RQS MPP++S  DST   S+S SSSIT+DGS  FL SHH LQ
Sbjct: 1   MGHSHTQSSISPPPLPDRRQSLMPPSAS--DSTRSISQSVSSSITLDGSNPFLYSHHSLQ 60

Query: 61  LDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVL 120
           LDAEQTHWTDEKHR YLDSLEASFVQGLHQHRR HALS +QKM  KP M + SSSELM+L
Sbjct: 61  LDAEQTHWTDEKHRLYLDSLEASFVQGLHQHRRRHALSMEQKMHWKPFMPNISSSELMIL 120

Query: 121 QDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRR 180
           QDASWQKANIGRNDP LDKTADSPAILEDLWIN FPSAGKQC+ E PD+LEECGSCSDRR
Sbjct: 121 QDASWQKANIGRNDPSLDKTADSPAILEDLWINRFPSAGKQCTPEIPDVLEECGSCSDRR 180

Query: 181 HIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASS 240
           H+R+ +NSCGSAR+SQQ  PCC +S  IITEVSDQNFVD+ P ELSGG+PIAKRLKK SS
Sbjct: 181 HLRNTSNSCGSARSSQQIPPCCRDSNIIITEVSDQNFVDDHPRELSGGIPIAKRLKKVSS 240

Query: 241 GFLDNAQVVPFKRLS 254
               N QVVP+KR S
Sbjct: 241 DSSGNDQVVPYKRSS 253

[Close]

BLAST of Cmc01g0003321 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.7e-07
Identity = 60/204 (29.41%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 63  QTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMR--------RKPIMLDTSSSE 122
           +T WT+EKH  YL S+EASFV  L  +  + AL   + +         RKP     S  +
Sbjct: 45  ETEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQEQ 104

Query: 123 LMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINHF-PSAGKQCSLETPDLLEEC 182
             VL D  WQK N+ + +  ++     +S   L   WI H+ P    Q  +      +  
Sbjct: 105 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVV 164

Query: 183 GSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTII---TEVSDQNFVDNQPGELSGGMP 242
            S + ++ I     S GSA + +Q      +   I     EVSDQNFV+      +G   
Sbjct: 165 SSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGSSK 224

Query: 243 IAKRLKKASSGFLDNAQVVPFKRL 253
             K +  + S   D  QVVP  +L
Sbjct: 225 KMKTVMMSESSSTD--QVVPLNKL 235

[Close]

BLAST of Cmc01g0003321 vs. ExPASy Swiss-Prot
Match: Q8L983 (Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.8e-06
Identity = 40/127 (31.50%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 16  DRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLDAEQTHWTDEKHRSYL 75
           ++   +  AS+ + S    S S  S +T + S+   DS    +LD E T WT+EKH SYL
Sbjct: 13  EKDRDVSEASAESQSESTLSNSLDSGVTAETSRSDADS----KLD-ECTAWTNEKHNSYL 72

Query: 76  DSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDT--SSSELMVLQDASWQKANIGRNDP 135
           D LE+SFV+ L+    +    +++  R + +  ++  S+ +  VLQ+  WQK N G+   
Sbjct: 73  DYLESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQS 131

Query: 136 LLDKTAD 141
            L+ +++
Sbjct: 133 CLETSSE 131

[Close]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 508.8 bits (1309), Expect = 1.3e-140
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LDNAQVVPFKRLS 254
           LDNAQVVPFKRLS
Sbjct: 241 LDNAQVVPFKRLS 253

[Close]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 3.2e-136
Identity = 244/245 (99.59%), Postives = 244/245 (99.59%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LDNAQ 246
           LDNAQ
Sbjct: 241 LDNAQ 245

[Close]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL
Match: A0A0A0K7Z2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.3e-124
Identity = 229/253 (90.51%), Postives = 234/253 (92.49%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSF+S PLADRQSPMP AS+TTDSTGFNSESHSSSIT+DGSK F DSHHC QLD
Sbjct: 1   MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSKHFFDSHHCSQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHR YLDSLEASFVQ LHQHR MHALS KQKMRRKPI  D SSSELMVLQD
Sbjct: 61  AEQTHWTDEKHRLYLDSLEASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSELMVLQD 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
           ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEEC SCSDRRHI
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECESCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           R+MTNSC SARNSQ TRPCC NSYTIITEVSDQNFVDNQPGELS GMPIAKRLKKASS F
Sbjct: 181 RYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDNQPGELSSGMPIAKRLKKASSDF 240

Query: 241 LDNAQVVPFKRLS 254
            D+AQVVPFKRLS
Sbjct: 241 SDSAQVVPFKRLS 253

[Close]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL
Match: A0A1S3BZQ8 (uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 4.4e-109
Identity = 212/253 (83.79%), Postives = 215/253 (84.98%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60
           MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120
           AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSE+     
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEV----- 120

Query: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180
               + +I                       H  S  KQCSLETPDLLEECGSCSDRRHI
Sbjct: 121 ----RQHI-----------------------HKKSGRKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKASSGF 240
           RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMP AKRLKKASSGF
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 221

Query: 241 LDNAQVVPFKRLS 254
           LDNAQVVPFKRLS
Sbjct: 241 LDNAQVVPFKRLS 221

[Close]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.6e-93
Identity = 182/256 (71.09%), Postives = 208/256 (81.25%), Query Frame = 0


Query: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSK---RFLDSHHCL 60
           M D+HTPS +S P+ADR+SPM  + S +D T  NSES+SSS TVD S+     + SHHC 
Sbjct: 1   MVDAHTPSSMSPPVADRESPM--SVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60

Query: 61  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMV 120
           QLDA QTHWT+EKHR +LDSLEASFVQ LH++R + ALSSKQKMRRKPIM + SSSE MV
Sbjct: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMV 120

Query: 121 LQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDR 180
           LQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG QC+LET D+LEECGSCSDR
Sbjct: 121 LQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDR 180

Query: 181 RHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAKRLKKAS 240
            HIR+ TNS  SAR+SQQ  PCC +S+TI+TEVSDQNFVD  PGELS G PI KRLKKAS
Sbjct: 181 SHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKAS 240

Query: 241 SGFLDNAQVVPFKRLS 254
           S    N +V P+KRLS
Sbjct: 241 SDSSGNNRVAPYKRLS 254

[Close]

BLAST of Cmc01g0003321 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 58.9 bits (141), Expect = 6.7e-09
Identity = 56/201 (27.86%), Postives = 88/201 (43.78%), Query Frame = 0


Query: 63  QTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMR--------RKPIMLDTSSSE 122
           +T WT+EKH  YL S+EASFV  L  +  + AL   + +         RKP     S  +
Sbjct: 45  ETEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQEQ 104

Query: 123 LMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINHF-PSAGKQCSLETPDLLEEC 182
             VL D  WQK N+ + +  ++     +S   L   WI H+ P    Q  +      +  
Sbjct: 105 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVV 164

Query: 183 GSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPIAK 242
            S + ++ I    ++    + S  +R    +  ++  EVSDQNFV+      +G     K
Sbjct: 165 SSSNGKKGICSSGSASSLKQLSSHSRD--HDQISVGEEVSDQNFVNEGIKGENGSSKKMK 224

Query: 243 RLKKASSGFLDNAQVVPFKRL 253
            +  + S   D  QVVP  +L
Sbjct: 225 TVMMSESSSTD--QVVPLNKL 234

[Close]

BLAST of Cmc01g0003321 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08
Identity = 60/204 (29.41%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 63  QTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMR--------RKPIMLDTSSSE 122
           +T WT+EKH  YL S+EASFV  L  +  + AL   + +         RKP     S  +
Sbjct: 45  ETEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQEQ 104

Query: 123 LMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINHF-PSAGKQCSLETPDLLEEC 182
             VL D  WQK N+ + +  ++     +S   L   WI H+ P    Q  +      +  
Sbjct: 105 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVV 164

Query: 183 GSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTII---TEVSDQNFVDNQPGELSGGMP 242
            S + ++ I     S GSA + +Q      +   I     EVSDQNFV+      +G   
Sbjct: 165 SSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGSSK 224

Query: 243 IAKRLKKASSGFLDNAQVVPFKRL 253
             K +  + S   D  QVVP  +L
Sbjct: 225 KMKTVMMSESSSTD--QVVPLNKL 235

[Close]

BLAST of Cmc01g0003321 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 56.6 bits (135), Expect = 3.3e-08
Identity = 60/204 (29.41%), Postives = 88/204 (43.14%), Query Frame = 0


Query: 63  QTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMR--------RKPIMLDTSSSE 122
           +T WT+EKH  YL S+EASFV  L  +  + AL   + +         RKP     S  +
Sbjct: 45  ETEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQEQ 104

Query: 123 LMVLQDASWQKANIGRNDPLLD--KTADSPAILEDLWINHF-PSAGKQCSLETPDLLEEC 182
             VL D  WQK N+ + +  ++     +S   L   WI H+ P    Q  +      +  
Sbjct: 105 FKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQVV 164

Query: 183 GSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTII---TEVSDQNFVDNQPGELSGGMP 242
            S + ++ I     S GSA + +Q      +   I     EVSDQNFV+      +G   
Sbjct: 165 SSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFVNEGIKGENGSSK 224

Query: 243 IAKRLKKASSGFLDNAQVVPFKRL 253
             K +  + S   D  QVVP  +L
Sbjct: 225 KMKTVMMSESSSTD--QVVPLNKL 235

[Close]

BLAST of Cmc01g0003321 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-07
Identity = 40/127 (31.50%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 16  DRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLDAEQTHWTDEKHRSYL 75
           ++   +  AS+ + S    S S  S +T + S+   DS    +LD E T WT+EKH SYL
Sbjct: 13  EKDRDVSEASAESQSESTLSNSLDSGVTAETSRSDADS----KLD-ECTAWTNEKHNSYL 72

Query: 76  DSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDT--SSSELMVLQDASWQKANIGRNDP 135
           D LE+SFV+ L+    +    +++  R + +  ++  S+ +  VLQ+  WQK N G+   
Sbjct: 73  DYLESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQS 131

Query: 136 LLDKTAD 141
            L+ +++
Sbjct: 133 CLETSSE 131

[Close]

BLAST of Cmc01g0003321 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). )

HSP 1 Score: 52.8 bits (125), Expect = 4.8e-07
Identity = 40/127 (31.50%), Postives = 69/127 (54.33%), Query Frame = 0


Query: 16  DRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLDAEQTHWTDEKHRSYL 75
           ++   +  AS+ + S    S S  S +T + S+   DS    +LD E T WT+EKH SYL
Sbjct: 13  EKDRDVSEASAESQSESTLSNSLDSGVTAETSRSDADS----KLD-ECTAWTNEKHNSYL 72

Query: 76  DSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDT--SSSELMVLQDASWQKANIGRNDP 135
           D LE+SFV+ L+    +    +++  R + +  ++  S+ +  VLQ+  WQK N G+   
Sbjct: 73  DYLESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQS 131

Query: 136 LLDKTAD 141
            L+ +++
Sbjct: 133 CLETSSE 131

The following BLAST results are available for this feature:

BLAST of Cmc01g0003321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008454952.1	2.6e-140	99.60	PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]	[more]
KAA0031301.1	6.7e-136	99.59	Cold regulated protein 27, putative isoform 2 [Cucumis melo var. makuwa] >TYK067...	[more]
XP_004136978.1	2.6e-124	90.51	cold-regulated protein 27 isoform X1 [Cucumis sativus]	[more]
XP_008454953.1	9.1e-109	83.79	PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]	[more]
XP_038887003.1	3.4e-95	75.29	cold-regulated protein 27 isoform X1 [Benincasa hispida]	[more]

BLAST of Cmc01g0003321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	4.7e-07	29.41	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]
Q8L983	6.8e-06	31.50	Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1	[more]

BLAST of Cmc01g0003321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BZU8	1.3e-140	99.60	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C4A3	3.2e-136	99.59	Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0K7Z2	1.3e-124	90.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1	[more]
A0A1S3BZQ8	4.4e-109	83.79	uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GJA3	7.6e-93	71.09	uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Cmc01g0003321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	6.7e-09	27.86	cold regulated gene 27	[more]
AT5G42900.1	3.3e-08	29.41	cold regulated gene 27	[more]
AT5G42900.2	3.3e-08	29.41	cold regulated gene 27	[more]
AT4G33980.1	4.8e-07	31.50	BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G429...	[more]
AT4G33980.2	4.8e-07	31.50	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 6..252
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 6..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc01g0003321.1	Cmc01g0003321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold