CmaCh20G011240 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G011240
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	upstream activation factor subunit UAF30-like
Location	Cma_Chr20: 8878787 .. 8888754 (-)
RNA-Seq Expression	CmaCh20G011240
Synteny	CmaCh20G011240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCGTCCCCAATCTCCCGTCTGTTCTTCACGCAAAGTCTTTTCCTGTTCGAAACCAAAGCCAAGCCAAAGCCACACGCCACACGCCACGGATAGTGTGCCCTCAACTCCAAATCCTACCCTCCTATAATCGATTGTTCTTCCTTCAATCTGCGAGGTTTTGCTCTGCTTCGAATAAGATTCTGGATTTCAACAATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTCGGCGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAAGAAGGTGGCGGCGACTGTGAGGAAGCCGACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGATGGAGACAGTGAAGACGGAGATAACGACGGCCACGATGGTGAAAAGGGTAAAATGGGGTGAGTGTGATTGATGAAACTTCGCAATTATAAAGATTATGGATTTCAGTTTAGTGTTGGGGGTTTAAATGGCTCTAATGTGTAGCTTAGTAATTTTTGTCCATATACGGTGCAAAAAGACAGTGAATCGATTCGTTTTCATACTGAAAATAGTGGCAAGATTGTAAAAATCATCAACGCTGGAGCTTCTATCCTCAATCGATCGCAACATTGTCGATTGTAATATCTTTTGGTATTGCGTTGATTAATTCTTTATTTTAGTTGTTAGAATTAAGCATTTTTTTGTTGTCCGATGTCGAAATCAGTGTTCTCAGCTACTCAGGGGAAAGCCTCCTCTTAAAAATCGTATGGATTTTGCATGAATTTTTATCTGAAAGTCTGATAAACTATGCAGATTATGGAAAGAAGTGTTATAGCAACAAGCTAGCTAATTTGATCATTGTAAAACAATGCAAATATGTTTCCATACCTCGATTGATGACCTCCATTTGCCCGACTAGTTTGGGAAGTCAAGGGAAATTGGGAGAGAGTGTTAGACTTATTGAATGTCTGGCTTACATGCAATTACAATTAATCCTATGTTGGGGAGAATTTTCACCTTTTTCTTTCATTAATCCTATAGCAGGAACTTTTGGGAGACCTTGCTTCAGGGTTTTGAATTCCAGGGCTAAAAACAATGTTCTGAATCTACTTTGTGGCCATGGTCTAAGAGGGAGAGAAAAAGTTTTATGGATCAACGCTGTGAATCTGTGGTTTGGGTAGTTTGTTTGAAGGGAATCACATTCTAATGAGAACTAATGTGCTTCTTGGGAGGAAAAACTTGAAATATTTTAGTACCACACTGCTTCATGAATGTTCTGAAATTAATTTTTGTTGGGCTTTTTTGGTTTTTTGTTTTGTAATTCTCTGATCAGATGGTGTTTTTAGCTTTAGCTTATGTTTTCTTGGTTTGGGTTGTTTCAGGTTGTAACTTTTCATGTATATGAAACGTTAAAAGACACTTGAAATTTGTATTAGAGACCAACTTTGATGATTGAGTTAATTGTTCTTTGTAATGCAGTTCTAACAAGCTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTACATCTAGAAAGTAAATTTTGAACCCCTTTTTTTCAATCTTCTTAATGTGCTAATGAAGTCATGTGTTGTCTTTTTCATTCCTTCTAATGCCATAATTGCGATATTTTCTCAGGTTGTGAAGCAACTATGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTCGTGTTGATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGGTGTGCTTTTATAGCTTTAATTTTGTGGCTAAAATTATGCTTCTGTTTTCTCAGGTGTTTGGACTTACCATTGCTCTTAATAATAGCTATTTTTTTAATGTCATCTGGCTTCTATGGAACTTTGAGTGCTATTTCAATATTGACTCTTGAATTTTCTTTTCTTCAATTTATTTTCCTTTTTTTTCTTTTAAATCGTAATAAAGGAAACTTTTTGTTTGGATGCTCCTGATTTGGAGGGGTTTCAAATCGTAACTGATTTCCAATGAATTCTGTCGTCTGTGATCACAAGAAAGCGAATGATTAAGTGTTTTCAAATCTTGTTTTTTACATAAAAAAGAGAAAAATTTGCCATACTAAAATTGAGATTAGTTACTTGCAAGACCTTGTGATATTTGAATTTTCTATTAATAATTTATAATTAAAAGCCTATATCAGTAAACTTCTTACTTTCTTTTATTTTCCAGTTACTATCCAAACACAAAATTGTAATTACATTCATTTGAAATCTTTCTCGTTCCAAACAAGATAAAAGTTTAAAATCATTTCTTGAACTTCAAATCACGTGATTTGAAATCATTTCTTGAACTTTCTTGATCCCAAACAGAGGGAGTTTTGGTCTCCATTCACATTCCTTAATGGCTAATGCTTGCCACTGCAAACCCTGAACTTTATTCTGATGAAGCTGAGCAACAAACCTTATTGATCCTTTTTTCTTAGTAATTTTTTTCCTTTCTTGCATACAGTTATTCCGGCCAAATCAAGTCAGAAAGAAAAGAAACAACAGGAGAAGCAGGAAAAGGAGAAGCAGCCAAAGGAGAAGCTACAAAAGAAGCGGCAGAAGCAAGGGAAAGAAGAAGGTAGATAGCAAAAATAGTTGTCTTTGTTTGAAATTCTATGACTGCGTACTCTGTTCATGGCAAGAAACCCCTGTACCCCCTACTATAACAAGACTTCCAAAATCATTAGTAGGATAAAATCTGAATTTTTCAGATAAAGTACATACCAAGAAGCCGCGTAAAGTTATCACCTTGGATCTCTCTTCCCTTATCTTTGAAGATCCATTGGTTTCTTTCTAATCATGTGCCCCCAAAAAGTTGCTTAAATCCATTAATCCACAATAATTTAGCACATCTTTTCATCCCTTGGCCAATCTGTGCAATTGTAGCTTTAGCTCCAATATTGAAAATCCAGGAAAAGCCAAGGTTGAAAACGGATCCCAGATTTTACCAGTGAGTAGGGGTGATCATCGATTGGTTGGCATCAATTTTGGGTTCAAATTGGTGCTAACCACCAACATGCTAGTTTTCGTCAGTTTGTTTTGTAGGGGTTGGGGGTGTCAACCAGTGTTTTTGTTGGTTTTGGTCGATTTTGCAACTCTGATGAACTAAATAGAAAATAATGCGACAAACTAGACAAAAAGAATGTGAAAAACATAGAAGAAAAGGAAAAAAGGGAGAAGGAAGAAGAAAGGAAGAAGAAAAGAAAAAATAAAGGAGAAGAAAGAAGGAAGGAGAGAAATGGAAAAAAGGAAAATACAAAATAAAGAAATTAAAAAAAAAATCTTGTAATAATATCTTCCCTTGGAAGAGGAAGATTAGGAGGCTGCTGCAGCAGCCTGTTATGCACGCCAAGTTCAATTACTATTATTATTTTAGTTGGTTGGTTTGGTTGGTTTTATCCTTTTGTGGGCTTGCTGACCGACCACTTGCCAACCGATCTCGACCGAAAAGCCCATAGCCAGACCGACTGGATGAAAAGCCGGGGTAGAAGCACAAAAGGAGAGAGGCAAAGTCAGCCGGTCTCAGTCTGTTTCCATGGTTTTCGGATTTTCTTGCTCACCCCTGGCTGTGAGAGAGCTATGTGAGAGAGAAGAAAGTAAGGATTTTATTCTTCTTTCTTTCATAAGCTGATCCTACTTGAACGAATTGCTAGATAGGGTGGCATTTTCTGCAATTTTATGCTAAATTTAGCCCCTCCGAGTATACTAACCTGACCAAAATATTCACTTTACTGCTGTGTGAGAGAAAACAAAGTAAGGGTTTTATTCTTCTTTCATGGATGAGCATCCAATTTGGATGAGTTGCTAGATAGGGTCACCTGTTCTGCACTTTTTATGCTAAATTTAGCCCTTCCAAGTACACTAACCTGACCAAAATATTTACCTTTTTGGGGCATTAAGGCTTTCATATAGCTTCAATAAAATGTGTTGGAAGAGGACCTTGTGTCAATACTTCAAACAAAGGATTCATTGAAAAACTTTTAGGCCTCCGATATTGAGAGCATATGAGATGAGGGTAAAGGAAAATGTATCTTAAAGTTAGCTAGAATAGACTGTGTTTATTTATATAGGTTAGGGTTGTAAGATTGAGGTAAGAAGGTTCTTGTGGGCTATTTGTAGGGGAGAGAAGCTGACCTTCTCAAATTGGCTGCAAGTCTAGTATGGTGCTAGAATAGACTGTGTTTATTTATATAGGTTAGGGTTGTAAGATTGAGGTAAGAAGGTTCTTGTGGGCTATTTGTAGGGGAGAGAAGCTGACCTTCTCAAATTGGCTGCAAGTCTAGTATGGTGCTAGAATAGACTGTGTTTATTTATATAGGTTAGGGTTGTAAGATTGAGGTAAGAAGGTTCTTGTGGGCTATTTGTAGGGGAGAGAAGCTGACCTTCTCAAATTGGCTGCAAGTCTAGTATGGTGCTAGAATAGACTGTGTTTATTTATATAGGTTAGGGTTGTAAGATTGAGGTAAGAAGGTTCTTGTGGGCTATTTGTAGGGGAGAGAAGCTGACCTTCTCAAATTGGCTGCAAGTCTAGTATGGTGCTAGGTTGACCTCTACCCTTTTAAATAAGAAGAATCTTAAATGTTGATACCTATTAGAAACCTACCGTATCCAAGCCTTCATGATGAGTCTTCCTGCAGCTACAATTAATTCTAATGAAGACTCTCAAAGTTGGTCTCTTAAATTCTTGGGTGGGTTTTCTGTCAAATCTTGGACTTGTCATTTGGCTTCATCATCTCATTTGGACAAAGATATATTTTCACCTCCGTGGAAATTGGAAGTCAAAAAGCCCAAAGAAAACTAGTACTGTTGTGGATTATGCTCAATGATATTCTTTAGCTCCTCCAAGGTTTTGCAAAGAAAGCTTCCTCTCCAATGTCTATGGCAATCGGTTTGTTCACCATTTTTTTTTTTTTTCTTTTGCAGCGCGGGATTATATAAATCATATTTTCTTTGAATGTTCATACTCTTGTTCATGCTGGCTCAAGCTTTTTTCGATATTCAATGTCCAGTGGGTTTTCTCTAACTTAATGAACGAAAAGGTTTCTCAACTCTTGTTGGTCCCCTTCTGAATCTTAAGGTGATGTTCCTATGGCTTAATACGGTCAAAAGGCATTCTACCATAATTATGGTTGGAGAGGAATCGGAGAATTTTTCAAAATCAGTGCCTTTCTTGGTTTGGCTGATTTGAAGCAGCATGATTAAAGTCTTCTTCTTGGTGTTCTCTCTTAAAGATTTTTGTTGGGTGTTCTTTACAAGATATTTGTCTTGATTGACATGCCTTTATTTCTCCTTTATAGTTTTTTTTTTTTTCTCTCTTTTTACTGTTTTATCCTTCATAGGGGGATGTCTAACTTCAGAGTCCTTGCCCCTCCAAAAGGCTTTTCATGCAGCTCTTTCTTTCATTGTTTGGCTAGCTCCTTTCAGTGAAGTGACTATCTTTCCCTTTTTGTGCAACTATCAATTAGGTCTCATTCTTTTAGACATTATGTATGCCCTTGTACATTCTTTCATTTTTCTTAGTGTGAGAGCTCAGTTGTTTGTTTTTTTTCCTTTTTTTTTTTTTTTTTTCCTAAAAAAATAACAAACAAAATATTTCCCTCTGTATGGAAGGTAAAATTTCCAATAAGGTTAAGTTTTTGGTATGGCAAGTTATGCATGGAACTTGGAAATGTTAACACCTTAGATCCAATATCAGTTAGGGTGTCCTCTTTGGTTGGGCTGCTTTGTTGTATTATTGCAGAACGTTTCGAAGGACCCGGATCCTTTAATCTGGAGATGGGATTTTGCCAGGTCTATGTAGCTGTTTCCTTGAGATATTTACCTTCAGCGTTTCCAGGAATGTTTGTGAAGCTTCTTCTTGCTTGCCTTTCTGTGAGAAAGGATTATTTTTTTGGCAGGCTGGGGTTGTTTCACTTTATGGAGTCTTTGGTGGGAGAGAAATAATTGAATCTTTCAAGAAATGAGAGATCTTATAGTGAAGTTTGGCCCTTTGTTAATATCTATATTTCTCTTTGGACGTAGGAGACAAGGTTGTTTTTGTAATTACTTGCTAAGTCTTATTTTACTAGATTGAAGCTCCTTTTTGTAGTTTGTTGTCTAGTTTCCCCTTTCTTTTGTGGGTTTTTTATGTATGTCCTTGTATTTTTTCACTTTTTCTTATCGAAGGTTCGGTGTATCCTTTAGTTAATTGCCCAACTTAATTGCTTCAGAACGAATTAGAAAAGATGTAAAATTTTAAACTATACTGTTTCCAGTTTCAGCTAACCGAAGGATCTACTATACTAATATCTAACAAACCTTCTTTCCAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGAATTCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGTAGTTGGCCTTTAGAAAGAAAGAAAGATTCTTTGATAGTATAGTAACAATATCTGCTTATGAGTCGGCGGATAGCTTAGCTATTATTTGGGAAATTAGAGAGAATATGTGAATCTTGGAAAACATGCTTGATTTTAGTATTTTTGTAGGTGTTCAAATCATATGCTAGTATTCATCCATCATTCATGGCTTTTGTTTTCAGTTAGGTGATCAACTTGGTTGTTTCTTCATCGCATTAATCAATTTTTTCTCATTGTATTTTGACTTGCATGTTCTTTTATCATGCATTATCGCTCCAAACCAATGTGATTTATGACCAGAATATATATCTATCTATCTAGATATATATATATATTGTTCTTACCCAGCCATTGTTTTCATGCTATTTAGTTATATATTCCATCCTCTATGTGTAGCATATAATTGTACCTATTTTTTAGAAGTTTTTAGAATATGTGGATTCTCTTAGCTGACATTGTTTACATACCCCAGCTCTTGATCTTGGGATAGTTTTTTTTTTCCCCCTTGTTTTTGTGTATGGCTTGAGCTTTTAGAAGCGTAACTTATTATAATGGAATAAATGTTAAAAGTTCTCTGTTGGACCTTTCATTTCTAAAGATTATTGTTATCATTGTTTAAAAATTCTTGTTCCTTTTCATTTTATGAGTGAAAAATTCATATTGGTAGAATCTGGAAAGTTCTAATAGTTGAGTGAAAAGTTACGTGAGGAACACCCCAGCCCAGGAAAGCTTTCAAGAATTTCTCCAAGTTGAATTAATAAAAATCAATGCTCACAAGAGGCTAGAGGGAGTAAATCAATAGGAACTCAAGTGCTGGCTCTACTCTCACTCTTTCTGCTGCTCCCTCCTTTCTCTCGTTCCGATTGGTAGTCATCATAGGCAGTACTTTTGAGGAATCTTTTCTTATTTGAATATGATTTTAATGGTCTATAAGTAGGTCAACTTATGGTGATTTCACGTAGTATTAAAGCTGAAATCTTGAATTCAAATCTGTCTGTTTGGGGTTAGCAAGTTAAATTCGATATCCAAGCCTACATGTTAGGCATAATGTTGAGGATATTCACATATATTGAATTGATTAGTTCTGTAATACAATCATTTTAGCTTGGATTTAGTGCTCTGATTTATTGGCAATCCTATCCCATTTCTTCATTATTTTGGATTCCACTTGTTTAGAAGGTAGCCAAATTCCTTGGAAGGTGGGAAATGCCTCGTTTTACTTGAGAGGATAGACGTGCCTTTATTCACTGTATTTTTCCACGTACCATCTCTCTTTTTATGTCGCCTTGCACACCAGTTCTATCATGCGAGTTCAATCTAGTGAACTAGTTTGTTGTAATAGCTAAGTCCACCGCTAGCATATATTGTCCTCTTTGACCTTTTCCTTTTGGGCTTTCCCTCCGTTTTTAAAACGTCTATTAGGGAGAGATTTCCACACCCTTATAAAGAATGTTTCGTTCTCGATCTCACCTTTATAGTCTCCAAGAATTCATTTTTCATAGTGAAAATAGGGTTACCTTTCCAAAAGAAGGAAAAGAAAACCCCAGCTTTTCTGTTGGAATCCTGGCACTATTTGGAGGCACAGAATTCCTTGGAGCAAATAAGAGTAGTTATTATGGGTGCCCATCTTTTGTGTGTTTGCGCTCGTGCAAGAAAAATGTTGATAATGAACATAGAAATTATGTTATTTTGACGATGCATCATTTAACATCTGAAAATGTTTCTTAATTGTTCTTGAAGGACCCTTCTGACAAAAGGAGAGTAATTTGTGACGAGAAGCTAAAGGAACTCTTCGATGTCGATTCCTTTCACGGCTTCACCGTTTCGAAACTCCTGGCCACTCATTTTGTAAAGACAAAATAGTGAGTTTCTCCTACACATTGTCTTTGAATGATGCAAGAGAATCTGGAATTTTGCTTGAGATAGTTTTAATCGCCTCTTCTTTCTGCTCTGTTCTCTGGAATTCACCAACAAGGCAATGGAAATCTATTTTATTGACCTTGAGTTATCTCCTCTTTGGTTGCTGGGTATGTTGCAAAATCCTTCAGAATTATTGAATCAACGATTAATAGTTCTTCTATGCTTCCTTACCTTTCAAGTAGCTGTTACATTTACAAAAAAAGGATGAGAATTTGCCTGCATGTTGGCCGAACTACATTTCTTTTGTTACTATTCATAGTTTTGGTTTGTTCTCTCTCTCGTTCTTCTCTCTCTAACACTTCTATTAAAGGTTCTTGACTGAAGCATGTGGTAAAGCATGAGAAAGGAAAACAAAACATTTTCTCCTGATATTAAGCTTATTGTCTGTTGTATACTGTGCTTGTTATCCTATTATGTTTGACCACAACTAGGCAACATTCGCGAATAAAGACTGGCATGACACTCTAAAATGCATGTTGGGTCGAGTAGACAGTGACTCGAGACCCTACAAGCAGGATTGCATGGAGATTATTTATTTATTTATGTATTTTTCGTTTATATTTTCTACTGAGATTCTGATTATTGTTTAATTGGTTATATGCCCTTAAGGACATACTCTTCGTTGTTTATGTTCGTTTTTTGAAAAAGAACGGTTGTAATGATTTGATCTTCTTATCTATTATGTGTGGAAATGATTAGGTTTGCTCTTGAATAAAAGGAGCAGTATAGAGGAGATGGAAAAGTTGATCCAACTGCTATAATAATCATGGTGACAAAATGATTTTCTTTTGCTCTTAATATTGATTACTATCTTTAAATTTTGGCAATTAATTTATTATGGTTATTTGTGATGGTAACTGCTCACTTTGCATATTCATTACCAATCTTGTTATTTAAATTAAATTGGCAGTTTGAAATTATTATTGTTAATTTCTTGATTATTTTGAGTTGAATTTATTTGCATGAATTCTTCATCTATATTCACTACCATCTCTTTAAACTCGTTTTGGAGATATACGATTTCATTCATAACTATCTTCGTGCCTCCTTTTGTAGGCAAACATTGCGCCGAGCTCACCCAACTAATATTGAAAATTGAGTAGATAACTCGTGTTGAGTCTTTTAAAAATTTCATTTTTTCACTACCTCTATTGTAATACGACCGAGGCATCATTGACTCAAGAAGACTAATTAGCTCACTTAGAGTATGAGCTCGTTACCTAGAGTGAGATCATTTTCTCTTTATCTTCGATAGTGCAACTTTCTTGTATTTTCCTACTCATTATTCTTTTG

mRNA sequence

GTCGTCCCCAATCTCCCGTCTGTTCTTCACGCAAAGTCTTTTCCTGTTCGAAACCAAAGCCAAGCCAAAGCCACACGCCACACGCCACGGATAGTGTGCCCTCAACTCCAAATCCTACCCTCCTATAATCGATTGTTCTTCCTTCAATCTGCGAGGTTTTGCTCTGCTTCGAATAAGATTCTGGATTTCAACAATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTCGGCGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAAGAAGGTGGCGGCGACTGTGAGGAAGCCGACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGATGGAGACAGTGAAGACGGAGATAACGACGGCCACGATGGTGAAAAGGGTAAAATGGGTTCTAACAAGCTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTCGTGTTGATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGTTATTCCGGCCAAATCAAGTCAGAAAGAAAAGAAACAACAGGAGAAGCAGGAAAAGGAGAAGCAGCCAAAGGAGAAGCTACAAAAGAAGCGGCAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGAATTCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAGTAATTTGTGACGAGAAGCTAAAGGAACTCTTCGATGTCGATTCCTTTCACGGCTTCACCGTTTCGAAACTCCTGGCCACTCATTTTGTAAAGACAAAATAGTGAGTTTCTCCTACACATTGTCTTTGAATGATGCAAGAGAATCTGGAATTTTGCTTGAGATAGTTTTAATCGCCTCTTCTTTCTGCTCTGTTCTCTGGAATTCACCAACAAGGCAATGGAAATCTATTTTATTGACCTTGAGTTATCTCCTCTTTGGTTGCTGGGTATGTTGCAAAATCCTTCAGAATTATTGAATCAACGATTAATAGTTCTTCTATGCTTCCTTACCTTTCAAGTAGCTGTTACATTTACAAAAAAAGGATGAGAATTTGCCTGCATGTTGGCCGAACTACATTTCTTTTGTTACTATTCATAGTTTTGGTTTGTTCTCTCTCTCGTTCTTCTCTCTCTAACACTTCTATTAAAGGTTCTTGACTGAAGCATGTGGTAAAGCATGAGAAAGGAAAACAAAACATTTTCTCCTGATATTAAGCTTATTGTCTGTTGTATACTGTGCTTGTTATCCTATTATGTTTGACCACAACTAGGCAACATTCGCGAATAAAGACTGGCATGACACTCTAAAATGCATGTTGGGTCGAGTAGACAGTGACTCGAGACCCTACAAGCAGGATTGCATGGAGATTATTTATTTATTTATGTATTTTTCGTTTATATTTTCTACTGAGATTCTGATTATTGTTTAATTGGTTATATGCCCTTAAGGACATACTCTTCGTTGTTTATGTTCGTTTTTTGAAAAAGAACGGTTGTAATGATTTGATCTTCTTATCTATTATGTGTGGAAATGATTAGGTTTGCTCTTGAATAAAAGGAGCAGTATAGAGGAGATGGAAAAGTTGATCCAACTGCTATAATAATCATGGCAAACATTGCGCCGAGCTCACCCAACTAATATTGAAAATTGAGTAGATAACTCGTGTTGAGTCTTTTAAAAATTTCATTTTTTCACTACCTCTATTGTAATACGACCGAGGCATCATTGACTCAAGAAGACTAATTAGCTCACTTAGAGTATGAGCTCGTTACCTAGAGTGAGATCATTTTCTCTTTATCTTCGATAGTGCAACTTTCTTGTATTTTCCTACTCATTATTCTTTTG

Coding sequence (CDS)

ATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTCGGCGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAAGAAGGTGGCGGCGACTGTGAGGAAGCCGACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGATGGAGACAGTGAAGACGGAGATAACGACGGCCACGATGGTGAAAAGGGTAAAATGGGTTCTAACAAGCTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCAACTATGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTCGTGTTGATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGTTATTCCGGCCAAATCAAGTCAGAAAGAAAAGAAACAACAGGAGAAGCAGGAAAAGGAGAAGCAGCCAAAGGAGAAGCTACAAAAGAAGCGGCAGAAGCAAGGGAAAGAAGAAGATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCGGATGCTCTGGTGACATTTCTTGGTACTGGAGAGAATTCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGACCCTTCTGACAAAAGGAGAGTAATTTGTGACGAGAAGCTAAAGGAACTCTTCGATGTCGATTCCTTTCACGGCTTCACCGTTTCGAAACTCCTGGCCACTCATTTTGTAAAGACAAAATAG

Protein sequence

MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK

Homology

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BLAST of CmaCh20G011240 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 5.7e-08
Identity = 74/237 (31.22%), Postives = 124/237 (52.32%), Query Frame = 0


Query: 11  LREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQV-DLFLQT--EHEREEEEGG 70
           +++ L   D    +   VR+ LEE   VDLS  K+ +   +   F +T    E+E  E  
Sbjct: 8   IKQILGTVDRQTVSAKQVRQLLEERRKVDLSAHKKDLNALILKCFDETAAPSEKESLEKQ 67

Query: 71  GDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGFSKLCSLS 130
               +   +   EN  TEE    ++       DGE+G  G  K  +       +K   LS
Sbjct: 68  APARKTKGKRATEN-GTEEGKKPAKRTRKRKEDGEEG--GKRKRNQDPANNPLNKPMKLS 127

Query: 131 PQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMN 190
           P+L EF+G+ +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F VD+++MF MN
Sbjct: 128 PKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDTLHMFTMN 187

Query: 191 KALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEEDSDDS 245
           K L+  +  +  +D +P        K Q K E+   P + L K+ +K+  E  + +S
Sbjct: 188 KYLTNLMTKI-PDDQLP--------KPQPKNEEPAAPND-LPKQEEKELVEPPTAES 231

[Close]

BLAST of CmaCh20G011240 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 4.8e-07
Identity = 70/222 (31.53%), Postives = 110/222 (49.55%), Query Frame = 0


Query: 5   SELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEE 64
           S +ID L   L D DL   TT  VR  L+E + +D+  + + I + +   L    ER   
Sbjct: 8   STMIDIL---LSDMDLETVTTKKVRMALKEVYAIDVESQGKAINKLIRKHLDLVKERPRF 67

Query: 65  EGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGFSKL- 124
           E     E+  +E+    ++  +E   S+   + G +    +     + KK+G    S + 
Sbjct: 68  E--RSLEDLLKENATLAIELTKEITVSK--RSSGEEKNDSETKGTHVEKKKGTVSKSPIS 127

Query: 125 ---CSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 184
               +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ L    S
Sbjct: 128 TRKVTLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLE-LILGKS 187

Query: 185 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEK 223
            NMF+M+K L+ H+         P K S      QE + KEK
Sbjct: 188 TNMFEMHKILASHM-------TEPKKISDCPPLIQEVRRKEK 214

[Close]

BLAST of CmaCh20G011240 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.9e-06
Identity = 60/199 (30.15%), Postives = 98/199 (49.25%), Query Frame = 0


Query: 28  VRRKLEEYFGVDLSDKKRFIREQV-DLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEE 87
           VR+ L+  + V+L  +++ I E + + F   +          D    DQE     L+ EE
Sbjct: 28  VRKALQILYSVNLDSQRKLINELILERFGDIQENPRVLIPKNDLISRDQE-LSLRLQKEE 87

Query: 88  EDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVK 147
           E          G    K K    K           +   LS  LQ+F+G  E+ RT+VVK
Sbjct: 88  ERPLRSTRKRKGKSESKSKRKKKKNDSPDSNSISVRKVLLSAPLQKFLGSEELPRTQVVK 147

Query: 148 QLWNHIRGNNLQDPSNRRNILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDVIPAK 207
            +W +I+ ++LQ+P +RR ILCDE ++ +F    + MF MNK L+KH++    ++++  +
Sbjct: 148 MIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHLF--NPDEIVKHE 207

Query: 208 SSQKEKKQQE-KQEKEKQP 225
             QK+  ++E K E E  P
Sbjct: 208 EEQKQTPEKEIKLENESLP 222

[Close]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL
Match: A0A6J1I6I7 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111470389 PE=4 SV=1)

HSP 1 Score: 630.9 bits (1626), Expect = 3.0e-177
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL
Match: A0A6J1EMX5 (upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=LOC111434984 PE=4 SV=1)

HSP 1 Score: 609.8 bits (1571), Expect = 7.1e-171
Identity = 328/338 (97.04%), Postives = 333/338 (98.52%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND HD EKGK GSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK+Q+EKQEKEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL
Match: A0A1S3C766 (upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC103497460 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 1.1e-144
Identity = 291/338 (86.09%), Postives = 306/338 (90.53%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIGRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           +  EEG G CEE +QEDGDENLK E EDGDSEDGDND  D EKGK  S+K AKKR GGGF
Sbjct: 61  KAVEEGYGHCEEVEQEDGDENLKMETEDGDSEDGDNDDEDDEKGKTSSDK-AKKR-GGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIG  EMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 SKLCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQK     EKQ+KEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQK-----EKQQKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGE++L RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREDKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331

[Close]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL
Match: A0A0A0LJW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1)

HSP 1 Score: 515.0 bits (1325), Expect = 2.4e-142
Identity = 284/338 (84.02%), Postives = 301/338 (89.05%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE
Sbjct: 1   MVSDSELISRLRDFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKLFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           +  +EG   CEE  QEDGDENLK E EDGDSEDGDND  D EKGK  S K+ K+  GGGF
Sbjct: 61  KAVQEGYAHCEEVHQEDGDENLKMETEDGDSEDGDNDNEDDEKGKTSSEKVKKR--GGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           +KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+S
Sbjct: 121 TKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNILCDEPLKALFGVNS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK Q     KEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQ-----KEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE++L RSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRR+ICDE+LKELFDVDSF+GFTVSKLLATHF+K K
Sbjct: 301 SDKRRIICDERLKELFDVDSFNGFTVSKLLATHFIKMK 331

[Close]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL
Match: A0A6J1L2C3 (upstream activation factor subunit UAF30-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499765 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 3.0e-137
Identity = 276/338 (81.66%), Postives = 296/338 (87.57%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELI RLRE LR+SDLN TTTAIVRRKLEE + +DLSDKK+FIREQVDLFL TEH+
Sbjct: 1   MVSDSELISRLRELLRNSDLNTTTTAIVRRKLEEDYSIDLSDKKQFIREQVDLFLHTEHQ 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAK--KRGGG 120
           R +EE GG C+E DQEDGD+N K EEEDG SEDGDN   D  K K GSN++ K  K+ GG
Sbjct: 61  RVDEEDGGGCDEVDQEDGDDNSKMEEEDGGSEDGDNYDDDDGKSKTGSNEIGKEVKKRGG 120

Query: 121 GFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRV 180
           GFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIR  NLQDPSNRRNILCDE LKALF V
Sbjct: 121 GFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGV 180

Query: 181 DSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKE 240
           +SINMFQMNKALSKHIWPLESNDV PAKSSQKEK+Q+EK +K         KKR+KQGKE
Sbjct: 181 NSINMFQMNKALSKHIWPLESNDVTPAKSSQKEKQQKEKPQK---------KKRRKQGKE 240

Query: 241 EDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQ 300
           EDSD S RE KRQKKGKSGFLAPLQLSDALVTFLGTGEN+LSRS+VVKRMWDYIKQNNLQ
Sbjct: 241 EDSDGSEREVKRQKKGKSGFLAPLQLSDALVTFLGTGENALSRSEVVKRMWDYIKQNNLQ 300

Query: 301 DPSDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVK 337
           DPSDKRR+ICDEKLKELFDVDSF+GFTVSKLLATHFVK
Sbjct: 301 DPSDKRRIICDEKLKELFDVDSFNGFTVSKLLATHFVK 329

[Close]

BLAST of CmaCh20G011240 vs. NCBI nr
Match: XP_022971720.1 (upstream activation factor subunit spp27-like [Cucurbita maxima])

HSP 1 Score: 630.9 bits (1626), Expect = 6.1e-177
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of CmaCh20G011240 vs. NCBI nr
Match: XP_023512445.1 (upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo] >KAG6571401.1 hypothetical protein SDJN03_30316, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 612.8 bits (1579), Expect = 1.7e-171
Identity = 329/338 (97.34%), Postives = 334/338 (98.82%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND HD EKGK GSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK+Q+EKQEKEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of CmaCh20G011240 vs. NCBI nr
Match: XP_022928098.1 (upstream activation factor subunit UAF30-like [Cucurbita moschata])

HSP 1 Score: 609.8 bits (1571), Expect = 1.5e-170
Identity = 328/338 (97.04%), Postives = 333/338 (98.52%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND HD EKGK GSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESNDVIPAKSSQKEK+Q+EKQEKEKQPKEK QKKRQKQGKEED
Sbjct: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEED 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 338

[Close]

BLAST of CmaCh20G011240 vs. NCBI nr
Match: XP_038901460.1 (upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida])

HSP 1 Score: 552.7 bits (1423), Expect = 2.1e-153
Identity = 302/341 (88.56%), Postives = 315/341 (92.38%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVD+FLQTEHE
Sbjct: 1   MVSDSELIGRLREFLRNSDLNTTTTAIVRRKLEEDFGIDLSDKKRFIREQVDVFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLA---KKRGG 120
           R  EEG GDCEE DQE GDENLKTEE+DGDSEDGDND  D EKGK GSNKL+   KKRGG
Sbjct: 61  RAVEEGCGDCEEVDQEGGDENLKTEEDDGDSEDGDNDDEDDEKGKAGSNKLSKEGKKRGG 120

Query: 121 GGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFR 180
           GGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIRG NLQDPSNRRNILCD+SLKALF 
Sbjct: 121 GGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRGKNLQDPSNRRNILCDDSLKALFG 180

Query: 181 VDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGK 240
           V+SINMFQMNKALSKHIWPLESNDVIPA SSQK     EKQ+KEKQPKEK QKKRQKQGK
Sbjct: 181 VNSINMFQMNKALSKHIWPLESNDVIPANSSQK-----EKQQKEKQPKEKPQKKRQKQGK 240

Query: 241 EEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNL 300
           EEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++L RSDVVKRMWDYIKQNNL
Sbjct: 241 EEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMWDYIKQNNL 300

Query: 301 QDPSDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           QDPSDKRR+ICDE+LKELFDVDSFHGFTVSKLLATHF+KTK
Sbjct: 301 QDPSDKRRIICDERLKELFDVDSFHGFTVSKLLATHFIKTK 336

[Close]

BLAST of CmaCh20G011240 vs. NCBI nr
Match: KAG7011165.1 (UAF30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 544.3 bits (1401), Expect = 7.6e-151
Identity = 293/338 (86.69%), Postives = 296/338 (87.57%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE
Sbjct: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
           REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND H  EKGK GSNKLAKKRGGGGF
Sbjct: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHVDEKGKTGSNKLAKKRGGGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS
Sbjct: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180

Query: 181 INMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKEED 240
           INMFQMNKALSKHIWPLESND                                      D
Sbjct: 181 INMFQMNKALSKHIWPLESND--------------------------------------D 240

Query: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDP 300
           SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKRMWDYIKQNNLQDP
Sbjct: 241 SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQDP 300

Query: 301 SDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVKTK 339
           SDKRRVICDEKLKELFDV+SFHGFTVSKLLATHFVKTK
Sbjct: 301 SDKRRVICDEKLKELFDVESFHGFTVSKLLATHFVKTK 300

[Close]

BLAST of CmaCh20G011240 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 256.1 bits (653), Expect = 3.8e-68
Identity = 162/344 (47.09%), Postives = 221/344 (64.24%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSDS+L+ +LRE LR SDL  TT A VRR+LE YFGV+L+DKK F+REQ+D FL+++  
Sbjct: 1   MVSDSDLVTQLREILRSSDLETTTPASVRRQLEVYFGVELTDKKAFVREQIDAFLESDAL 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
            E +                  + EEED + +  D +G + +  K      AKKR GGGF
Sbjct: 61  LESKP-----------------EQEEEDCNGDQNDEEGSENDDDKTELPVKAKKR-GGGF 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           +K+C LSPQL++F+G  ++ARTEVVK++W +IR ++LQDP+NRRNILCDESL +LFRV +
Sbjct: 121 NKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNILCDESLHSLFRVKT 180

Query: 181 INMFQMNKALSKHIWPLESND--VIPAKSSQKEKKQQEKQEKEKQPKEKLQKKRQKQGKE 240
           INMFQMNKAL+KHIW L   D      K    ++   E+ EK+ + +E L+   ++  +E
Sbjct: 181 INMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSGERDEKDVKIEEALENNEEESREE 240

Query: 241 EDSDDSAREEKRQKKGKS---------GFLAPLQLSDALVTFLGTGENSLSRSDVVKRMW 300
           ED     R+ K++K  KS         GF     LS  L  F GT +  L+R++VVK +W
Sbjct: 241 EDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGTPQ--LARTEVVKMLW 300

Query: 301 DYIKQNNLQDPSDKRRVICDEKLKELFDVDSFHGFTVSKLLATH 334
            YIK+NNLQDPSDKR +ICDE L+ LF V+S + F ++K LA H
Sbjct: 301 KYIKENNLQDPSDKRTIICDESLRSLFPVESINMFQMNKQLAKH 324

[Close]

BLAST of CmaCh20G011240 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 250.4 bits (638), Expect = 2.1e-66
Identity = 185/465 (39.78%), Postives = 237/465 (50.97%), Query Frame = 0


Query: 1   MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHE 60
           MVSD +L+ RLRE L  SDLN  T A VRR+LE  FGVDL+DKK +IR+Q+D FL++   
Sbjct: 1   MVSDLDLVTRLREILGSSDLNTATPASVRRQLEADFGVDLTDKKAYIRDQIDTFLESNGA 60

Query: 61  REEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDGHDGEKGKMGSNKLAKKRGGGGF 120
            E++      EE    D    +K E E GD ED D DG   E+ K      AKKR GGG 
Sbjct: 61  VEDKPESPKVEEYINAD---EIKAEIEGGDGEDLDGDGSGSEEEKEERPVKAKKR-GGGI 120

Query: 121 SKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFRVDS 180
           +K+  LSPQL++ +G  ++ RTEVVK++W +IR  +LQDP +RR I+CDE L +LFRV +
Sbjct: 121 TKVSQLSPQLEKVVGASQLGRTEVVKKMWAYIREKDLQDPKDRRKIVCDELLHSLFRVKT 180

Query: 181 INMFQMNKALSKHIWPL----------------ESNDVIPAKSSQKEKKQQEKQE----- 240
           INMFQMNKAL+KHIWPL                E+++    K  Q E+ ++ K+E     
Sbjct: 181 INMFQMNKALTKHIWPLGDGDGCANDVKEEDEDEASEGTDKKGEQSEEVEENKEEESEEQ 240

Query: 241 --------KEKQPKEKLQKKRQKQG----------------------------------- 300
                   K K+P + ++K ++K G                                   
Sbjct: 241 EVRSLRKRKRKKPAKSVEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYI 300

Query: 301 ------------------------------------------------------------ 339
                                                                       
Sbjct: 301 KENNLQDPNDKRSIICDESFRSLFPVESINMFQMNKQLTKHIWPLEDNAGESVSSKSPKN 360

[Close]

BLAST of CmaCh20G011240 vs. TAIR 10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 151.8 bits (382), Expect = 1.0e-36
Identity = 81/224 (36.16%), Postives = 131/224 (58.48%), Query Frame = 0


Query: 113 KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESL 172
           +K G GG +K+C +SP+L+  +G P + RTE+V+QLW +IR NNLQDPSN+R I+CD++L
Sbjct: 190 RKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKNNLQDPSNKRKIICDDAL 249

Query: 173 KALFRVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQPKEKLQKKR 232
           + +F  D  +MF+MNK L+KHI PL+     P+K S + KK + + E + +  E +    
Sbjct: 250 RVVFETDCTDMFKMNKLLAKHILPLD-----PSKDSGQAKKAKTEVETKTETTEPI---- 309

Query: 233 QKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYI 292
                                  +   + + LS+ L  F GTGE  ++  ++++R+W+YI
Sbjct: 310 ---------------------SSTAISSTVTLSEPLGKFFGTGETEMADEEIIRRVWEYI 369

Query: 293 KQNNLQDPSDKRRVICDEKLKELFDVDSFHGFTVSKLLATHFVK 337
           K NNL+DP +   + CDEKL++L   +S     ++++L  H  K
Sbjct: 370 KLNNLEDPVNPMAIQCDEKLRDLLGCESISAVGINEMLRRHMYK 383

[Close]

BLAST of CmaCh20G011240 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 75.9 bits (185), Expect = 7.1e-14
Identity = 38/83 (45.78%), Postives = 56/83 (67.47%), Query Frame = 0


Query: 256 SGFLAPLQLSDALVTFLGTGENSLSRSDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKEL 315
           +G L  + +S  L  F+  GEN +SR+  VK++W+YIK NNLQ+P +KR ++CDE+LK +
Sbjct: 28  TGILKVVPVSKPLANFI--GENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKTI 87

Query: 316 FDVDSFHGF-TVSKLLATHFVKT 338
           F      GF  +SKLL+ HF K+
Sbjct: 88  FSGKDTVGFLEISKLLSQHFPKS 108

[Close]

BLAST of CmaCh20G011240 vs. TAIR 10
Match: AT3G03590.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-11
Identity = 49/117 (41.88%), Postives = 70/117 (59.83%), Query Frame = 0


Query: 222 KQPKEKLQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSR 281
           K+P  K + K + + K + SD  A++  R     +G      +S  L  FLGTGE   SR
Sbjct: 33  KKPAAKPKAKAKPKPKAK-SDSPAKKTPR----STGIFKVTPVSPVLAQFLGTGET--SR 92

Query: 282 SDVVKRMWDYIKQNNLQDPSDKRRVICDEKLKELFDVDSFHGF-TVSKLLATHFVKT 338
           +D +K +W YIK ++LQ+P+DKR + CDE LK +F+     GF  +SKLL+ HFVKT
Sbjct: 93  TDAIKGIWTYIKSHDLQNPADKREIFCDETLKLIFEGKDKVGFLEISKLLSPHFVKT 142

The following BLAST results are available for this feature:

BLAST of CmaCh20G011240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O74503	5.7e-08	31.22	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q08747	4.8e-07	31.53	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q05024	6.9e-06	30.15	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]

BLAST of CmaCh20G011240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6I7	3.0e-177	100.00	upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1EMX5	7.1e-171	97.04	upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A1S3C766	1.1e-144	86.09	upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LJW7	2.4e-142	84.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1	[more]
A0A6J1L2C3	3.0e-137	81.66	upstream activation factor subunit UAF30-like isoform X1 OS=Cucurbita maxima OX=...	[more]

BLAST of CmaCh20G011240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971720.1	6.1e-177	100.00	upstream activation factor subunit spp27-like [Cucurbita maxima]	[more]
XP_023512445.1	1.7e-171	97.34	upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo] >KAG6...	[more]
XP_022928098.1	1.5e-170	97.04	upstream activation factor subunit UAF30-like [Cucurbita moschata]	[more]
XP_038901460.1	2.1e-153	88.56	upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]	[more]
KAG7011165.1	7.6e-151	86.69	UAF30 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh20G011240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49520.1	3.8e-68	47.09	SWIB complex BAF60b domain-containing protein	[more]
AT3G19080.1	2.1e-66	39.78	SWIB complex BAF60b domain-containing protein	[more]
AT4G22360.1	1.0e-36	36.16	SWIB complex BAF60b domain-containing protein	[more]
AT2G35605.1	7.1e-14	45.78	SWIB/MDM2 domain superfamily protein	[more]
AT3G03590.1	1.5e-11	41.88	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 203..223
None	No IPR available	GENE3D	1.10.10.60		coord: 1..59 e-value: 2.8E-9 score: 38.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 201..256
None	No IPR available	PANTHER	PTHR13844:SF53	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN	coord: 1..337
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 1..337
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 262..334 e-value: 4.05651E-32 score: 113.022
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 124..194 e-value: 2.16923E-36 score: 124.193
None	No IPR available	SUPERFAMILY	109715	DEK C-terminal domain	coord: 3..56
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 120..199 e-value: 1.5E-35 score: 134.1 coord: 258..338 e-value: 2.2E-25 score: 100.3
IPR014876	DEK, C-terminal	PFAM	PF08766	DEK_C	coord: 2..55 e-value: 6.4E-16 score: 58.0
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 251..338 e-value: 9.4E-31 score: 107.7
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 114..202 e-value: 1.3E-31 score: 110.3
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 118..198
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 254..336
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 123..194 e-value: 8.5E-30 score: 102.4 coord: 261..334 e-value: 3.0E-27 score: 94.3
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 257..336 score: 25.88792
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 119..196 score: 21.797609

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G011240.1	CmaCh20G011240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus