CmaCh20G010710 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G010710
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	UPF0235 protein C15orf40 homolog
Location	Cma_Chr20: 8096025 .. 8099627 (-)
RNA-Seq Expression	CmaCh20G010710
Synteny	CmaCh20G010710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTAAACTCTAACGACCGCTCGCAGAACTCCGATTGATTTTTGGAGGAAAATATTAAAAATTAAAGGGAGAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCCCTCAAACCCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTCTTCCATCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGGTCTTTCTCTCTCTCTCTCTCTTTCGGTCTAACTCTTTTCCGTTTATGAAATTGAAATAGTATTGTGTTTCTCGAAATCCTTGCAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTGAGTTGGGCATTCTTTGCTGCTTATTATTTGATTTCGAATTGCTTTTTCATTCCTAGAACTTGAATTTTCATTGCGCCATTTAACCATTTGGCTTAAAGTTGAAATTGATTGTTTTGTTGTTTGGGATTTTTGGTGAAGATTCCGAAAATTGGAATTGTTTTGAGTGTATTGGTCTAGCGAACGGATAATTTTGCTGTTCTTAGTTTGTTGAAAATCCGGTGTTGGATTCACCCATTTGAATTTGAAGGCTGTTATTCCTGTTGCTCGAAGGATTTGAAGTCTTCTATCTACTTACTGTGTAGTATTTTCGATCTTCCGTTGTTTAAATCTTCATACATGTTGACAGTAGTAGCTATACGATTCCCAAATCAGAAAAGTTGGATGAATTACCAACACTAGCTTTCAGTTTCCTGGCGTTATTATGTGAGATCCCACATCGATTGAACGAATGCCAACGAGGACGCTGGGTTCCGAAGGAGTGGATTGTGAGATCTCACATTGGTTGAAGAGGGGAACAAATCATTCTTTATAAGGGTGTGGAAACCTCTCCTTGACTATTTTAAAAACCTTGAGGGGAAGTCTGAAAGGGAAAACCCAAAGATGACAATATCTGCTAACGTTGGGTTTGGGCTGTTACAAATAGTATCAGAGTCAGACATCAAGTGGTGTGCCAGCGAGGGCACTGACCCTTGAAGGGAGGTGGACACCGGGTAGTGTGCCAGCGAAGATGTTGGGCCCCGAAGGAAGGTGGATTGTGAGATCCCACATCGATTGGAGAGATGATCGAGTGCCAATGAAGACATTGGGCCCCAAAGGGGGTGGATTGTGAGATCCCACAACGGTTGGAGAAGGGAACAAAACATTCTATATAAGAGGGTTGAAAACTCTCCTTAGCAGACGCGTTTTAAAAACCTTGAGGGAAAGTCCGAAAGGGAAAGCCCAAGGAGGACAATGGCTTGAGCTTGGGCTGTTACATATTACAAGCTTCCTACGTCATTTCTCCATTCGAATTATCCATAACTTGTTTAATTGAAATGAATTCATGTTTATAAGCACTTGGTTGTATTTCATGGGAAACTTGTCGTTGCTCCTTGGTAAAGGACCTGCGTATTTCTTTACAACTACTGCAGCTGCATTGAAGCATCTCTCATTTGTCAAGTTTTCACACAGCTCATAACAGTTCTATTTTTTATTTTTTGCTTGATTGCTACTTGGGTCTTCTATTTAGACAGTCTTTAATCTTTCCCTCCACCGTGAAGTTAGCTGTGAGAGAGTTAATGTGCTCTTCCTTTCTTTTTGGTAAAAATGATATAAAATCATTGGCATAGGAAGCTATGAAACCAAATGATTCACTCAACCCTACTATATGTGACTTAGGCCGTTCACATTAAAACTAGCAACTCCTGAACACACACACAGTAACACTTATTACACATACAAGGGTTCACCCAAGAGAAATAAGAAACGGACTAACCTTGATGGTCAAGGCTTTGAATAGAGAAAACTATTCTCAATCCAAACAAACAAGCTAGGATGCAAATGCTCTTGGCTTGGAGGAAAAAAGGGAAACTCTCATTTTATTTCATCAAAATGTCTAGCATCTCAAAATTTAAAACTTAAGGCCTTAAACTGCCGCATGTGATTTGCCAACTAAAGAACTAATTTGAATGGTGTTTGGTTACAAGTAAAATGGGAGTTTCTCAGATGGGCCAAAACACACTTGGCTGCACTCTTTGGTCTTAGAGCTATGTAAAAGGACTAAATAGCACCTAAATTAGAGCTTTCAGATTTGGTGTTTTCATGTTGCCTTGAAGTTCCTTTCTCTCTTCTTCTCCTTCCTCGTGAAGCTTGGTACTCCAAATATTGAAGTGAAGATCTCCTTTGCATGAATCATACAAACCATGAGATCTCACATCAATTGTAGAGGGGAACGATGAGATCCCACATCAGTTGGAGAGGGGAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTCCTTAATAGACACATTTTAAAACCGTGAGGCTGACGGTGATACGTAATGGACCAAACCGGACAATATATGCTAGCGGTGGGCTTGGGCTATTACAAATGGTATCAGAGGCAAACATTGGGCAGTGTGCCAGCGAGGACGCTGGGCCCCAAGGAGGGTGGATTGTGAGATCCCACATCGGTTAGAGAGGGGAACAAAACATTTTTTATAAGAGTGTGGAAACCTCTTCTTAGCAGGCGCGTTTTAAAACCGTGAGGTTGACTGTGATATATAACTGGCCAAAGCAGACATATCTAATAGTGGTGGGCTTGGGCTGTTACACGAACGATGCTTCCTTAACTCCTTTTATATTTATTGCAGGTTTTAGGTGTCAAAAGAAGACAATTATCTATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCCTTAACATGATTCTATAGGCTCTTTGGAAATGTACACCTTTTAACGGAATATCTGCATACTGTAATAAGTACAGGTGGATTAACTGCTATCTTGCTGCCGCAACATTTTAAGTTATACATCTAGATGTTACTCTTAGTTGTCTATATTTGATTTAAACCTCAATAGTATCTTAACCTGACTGGTAGCCTTCTACAAAGCGATTAATCTTGTTCTTGAGTATGTCCCCAACCAAAAGGTTAGAGGTTTAAATTCTCTCCCTACACTCTCGTATTAGATTGTATGCTTTGCAATACTCATAATCTTCGATCGACTGCCTTGCCTAACTATGATCCAATAAACTGATTATCAGATCCCTGGAGAGGTAACAACTCTGAATCTCCTAGCATGAAAGAGCTTTTCCTAAAATTGTGTATCTTCACCAGAAAAAATTGCCTACAGAATTTATCTGGCATTCTGGATAGTTTCTATGACTCTAACATGACAGGATTATGCTTCAGGATTCTCTAAGAATTAAGTATGTTGTGCCATTTTTTGGTTATGGAAATTCAGAGAAGAAGGTAAAGATTCGGATATAAAGAGTTTCTTCAACATAGCTCAATTGATTTAGATATTTTAATCTCGATCAAAAGTCATTGGTGTAGATTCCCACTCCTTCACAGGATTGAACCATAAAGAGTTTCCTTTCCATTATTATTGCATTTCAGTTCTATTC

mRNA sequence

TCTAAACTCTAACGACCGCTCGCAGAACTCCGATTGATTTTTGGAGGAAAATATTAAAAATTAAAGGGAGAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCCCTCAAACCCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTCTTCCATCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAATTATCTATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCCTTAACATGATTCTATAGGCTCTTTGGAAATGTACACCTTTTAACGGAATATCTGCATACTGTAATAAGTACAGGTGGATTAACTGCTATCTTGCTGCCGCAACATTTTAAGTTATACATCTAGATGTTACTCTTAGTTGTCTATATTTGATTTAAACCTCAATAGTATCTTAACCTGACTGGTAGCCTTCTACAAAGCGATTAATCTTGTTCTTGAGTATGTCCCCAACCAAAAGGTTAGAGGTTTAAATTCTCTCCCTACACTCTCGTATTAGATTGTATGCTTTGCAATACTCATAATCTTCGATCGACTGCCTTGCCTAACTATGATCCAATAAACTGATTATCAGATCCCTGGAGAGGTAACAACTCTGAATCTCCTAGCATGAAAGAGCTTTTCCTAAAATTGTGTATCTTCACCAGAAAAAATTGCCTACAGAATTTATCTGGCATTCTGGATAGTTTCTATGACTCTAACATGACAGGATTATGCTTCAGGATTCTCTAAGAATTAAGTATGTTGTGCCATTTTTTGGTTATGGAAATTCAGAGAAGAAGGTAAAGATTCGGATATAAAGAGTTTCTTCAACATAGCTCAATTGATTTAGATATTTTAATCTCGATCAAAAGTCATTGGTGTAGATTCCCACTCCTTCACAGGATTGAACCATAAAGAGTTTCCTTTCCATTATTATTGCATTTCAGTTCTATTC

Coding sequence (CDS)

ATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCCGAAAGCTACTGAATCAATTCAATCCTCCCTCAAACCCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTCTTCCATCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAATTATCTATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCCTTAACATGA

Protein sequence

MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKALT

Homology

[Close]

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot
Match: Q505I4 (UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-10
Identity = 42/105 (40.00%), Postives = 58/105 (55.24%), Query Frame = 0


Query: 3   PAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDDAL 62
           P K G T   K       +  P   P  + + S   + I IHAKPGSK  ++TD   +A+
Sbjct: 2   PKKAGATSKGKNQTKEPETPPPPTGP--VATDSKGFVTIAIHAKPGSKQNAVTDLNTEAV 61

Query: 63  GVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV 108
           GV I AP  +GEANA L  Y+S VL +++  + +  G KSR+KVV
Sbjct: 62  GVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

[Close]

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot
Match: Q8WUR7 (UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2)

HSP 1 Score: 67.4 bits (163), Expect = 1.3e-10
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 39  IAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGS 98
           + I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  + +  
Sbjct: 63  VTIAIHAKPGSKQNAVTDLTAEAVNVAIAAPPSEGEANAELCRYLSKVLELRKSDVVLDK 122

Query: 99  GSKSRDKVV-IVEEVSLQSVFDALNK 124
           G KSR+KVV ++   + + + + L K
Sbjct: 123 GGKSREKVVKLLASTTPEEILEKLKK 148

[Close]

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot
Match: Q3ZBP8 (UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.3e-10
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 39  IAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGS 98
           ++I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  + +  
Sbjct: 36  VSIAIHAKPGSKQNAVTDVTTEAVSVAIAAPPTEGEANAELCRYLSKVLELRKSDVVLDK 95

Query: 99  GSKSRDKVV-IVEEVSLQSVFDALNK 124
           G KSR+KVV ++     + + + L K
Sbjct: 96  GGKSREKVVKLLASTPPEEILEKLKK 121

[Close]

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot
Match: Q9CRC3 (UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 5.0e-10
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0


Query: 3   PAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSS---IAITIHAKPGSKIASITDFGD 62
           P K G T   K       + +P   P     V++     + I IHAKPGS+  ++TD   
Sbjct: 2   PKKAGATSKGK-----NQTKEPETAPPAAGPVATDPKGFVTIAIHAKPGSRQNAVTDLST 61

Query: 63  DALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV 108
           +A+GV I AP  +GEANA L  Y+S VL +++  + +  G KSR+KVV
Sbjct: 62  EAVGVAIAAPPSEGEANAELCRYLSKVLDLRKSDVVLDKGGKSREKVV 104

[Close]

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot
Match: Q54UW1 (UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 2.8e-08
Identity = 37/125 (29.60%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 5   KKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDDALGV 64
           KKG + + K  +  Q  +  NN       V    I I ++  P SK +SI  F D  L +
Sbjct: 3   KKGSSNSSKQQQQQQQIIINNN-----AKVDEPIIKINVNVHPNSKESSIVSFEDQILSL 62

Query: 65  QIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIV----EEVSLQSVFDA 124
           +I  P  DG+AN  +++++S  L +++  + +G GSKSR+K V +    E ++   +F+ 
Sbjct: 63  RISEPPIDGKANIGVIEFLSKELNIRKSNIEVGKGSKSRNKSVEIDISSENITKDELFER 122

Query: 125 LNKAL 126
           +   L
Sbjct: 123 IKSKL 122

[Close]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL
Match: A0A6J1I6J5 (UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=3 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 3.9e-58
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL
Match: A0A6J1EMK4 (uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC111434889 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.5e-54
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAPAKKGKTKA K TES +S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL
Match: A0A0A0LMY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 4.5e-54
Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 29  MPPAKKGKTKAPKATESIQSSVKSNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVE+VSLQSVFDA
Sbjct: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEDVSLQSVFDA 148

Query: 121 LNKALT 127
           LNKALT
Sbjct: 149 LNKALT 154

[Close]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL
Match: A0A1S3CDI8 (UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 1.3e-53
Identity = 118/126 (93.65%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDF DD
Sbjct: 29  MPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFDDD 88

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVEEVSLQSVFDA
Sbjct: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDA 148

Query: 121 LNKALT 127
           LNKALT
Sbjct: 149 LNKALT 154

[Close]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL
Match: A0A6J1CR98 (uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013451 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.7e-50
Identity = 112/126 (88.89%), Postives = 119/126 (94.44%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           M PAKKGKTKAPKATESIQS    N +PSCLRSV+ SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAPKATESIQS----NKFPSCLRSVAPSSVAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDY+S+VLGVKRRQ+SIGSGSKSRDKVVIVEEVSLQ+VFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYISTVLGVKRRQVSIGSGSKSRDKVVIVEEVSLQTVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 122

[Close]

BLAST of CmaCh20G010710 vs. NCBI nr
Match: XP_022971730.1 (UPF0235 protein C15orf40 homolog [Cucurbita maxima])

HSP 1 Score: 233.8 bits (595), Expect = 8.1e-58
Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. NCBI nr
Match: XP_023512400.1 (UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 223.8 bits (569), Expect = 8.4e-55
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAPAKKGKTKAPK TESI+S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAPKGTESIESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIG GSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGCGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. NCBI nr
Match: XP_038902101.1 (UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida])

HSP 1 Score: 222.2 bits (565), Expect = 2.5e-54
Identity = 120/126 (95.24%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           M PAKKGKTKA KATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MPPAKKGKTKAAKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. NCBI nr
Match: XP_022927983.1 (uncharacterized protein LOC111434889 [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 7.1e-54
Identity = 119/126 (94.44%), Postives = 121/126 (96.03%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAPAKKGKTKA K TES +S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDD
Sbjct: 1   MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDD 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA
Sbjct: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120

Query: 121 LNKALT 127
           LNKALT
Sbjct: 121 LNKALT 126

[Close]

BLAST of CmaCh20G010710 vs. NCBI nr
Match: XP_004151587.1 (uncharacterized protein LOC101218498 [Cucumis sativus])

HSP 1 Score: 220.3 bits (560), Expect = 9.3e-54
Identity = 118/126 (93.65%), Postives = 122/126 (96.83%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           M PAKKGKTKAPKATESIQSS+K NNYPSCLRSVS SS+AITIHAKPGSKIASITDFGDD
Sbjct: 29  MPPAKKGKTKAPKATESIQSSVKSNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDD 88

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGSKSR KVVIVE+VSLQSVFDA
Sbjct: 89  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEDVSLQSVFDA 148

Query: 121 LNKALT 127
           LNKALT
Sbjct: 149 LNKALT 154

[Close]

BLAST of CmaCh20G010710 vs. TAIR 10
Match: AT1G49170.1 (Protein of unknown function (DUF167) )

HSP 1 Score: 156.0 bits (393), Expect = 2.0e-38
Identity = 86/124 (69.35%), Postives = 106/124 (85.48%), Query Frame = 0


Query: 1   MAPAKKGKTKAPKATESIQSSLKPNNYPSCLRSVSSSSIAITIHAKPGSKIASITDFGDD 60
           MAP KKGK K   A ES  +  + +++P+CLR ++ SS+AITIHAKPGSK ASITD  D+
Sbjct: 1   MAPTKKGK-KTKSAAES-TTVTESSSFPTCLRLLTPSSVAITIHAKPGSKAASITDVSDE 60

Query: 61  ALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDA 120
           A+GVQIDAPA+DGEANAALL+YMSSVLGVKRRQ+S+GSGSKSRDKVVIVE+++ QSVF A
Sbjct: 61  AVGVQIDAPARDGEANAALLEYMSSVLGVKRRQVSLGSGSKSRDKVVIVEDMTQQSVFQA 120

Query: 121 LNKA 125
           L++A
Sbjct: 121 LSQA 122

[Close]

BLAST of CmaCh20G010710 vs. TAIR 10
Match: AT5G63440.2 (Protein of unknown function (DUF167) )

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 30/98 (30.61%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 28  PSCLRSVSSSSIAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVL 87
           P C+  +    + + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VL
Sbjct: 133 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 192

Query: 88  GVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL 126
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 193 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 230

[Close]

BLAST of CmaCh20G010710 vs. TAIR 10
Match: AT5G63440.3 (Protein of unknown function (DUF167) )

HSP 1 Score: 59.7 bits (143), Expect = 2.0e-09
Identity = 30/98 (30.61%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 28  PSCLRSVSSSSIAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVL 87
           P C+  +    + + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VL
Sbjct: 114 PPCISQLDGGLVQVAIEVEDRAQRSAITRVNADDVRVTVAAPAARGEANNELLEFMGRVL 173

Query: 88  GVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL 126
           G++  Q+++  G  S+ K+++VE++S + V++ L +A+
Sbjct: 174 GLRLSQMTLQRGWNSKSKLLVVEDLSARQVYEKLLEAV 211

The following BLAST results are available for this feature:

BLAST of CmaCh20G010710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q505I4	1.0e-10	40.00	UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1	[more]
Q8WUR7	1.3e-10	40.70	UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2	[more]
Q3ZBP8	2.3e-10	40.70	UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1	[more]
Q9CRC3	5.0e-10	37.96	UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1	[more]
Q54UW1	2.8e-08	29.60	UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1	[more]

BLAST of CmaCh20G010710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I6J5	3.9e-58	100.00	UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=...	[more]
A0A6J1EMK4	3.5e-54	94.44	uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC1114348...	[more]
A0A0A0LMY2	4.5e-54	93.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1	[more]
A0A1S3CDI8	1.3e-53	93.65	UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1	[more]
A0A6J1CR98	6.7e-50	88.89	uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CmaCh20G010710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971730.1	8.1e-58	100.00	UPF0235 protein C15orf40 homolog [Cucurbita maxima]	[more]
XP_023512400.1	8.4e-55	95.24	UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_038902101.1	2.5e-54	95.24	UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]	[more]
XP_022927983.1	7.1e-54	94.44	uncharacterized protein LOC111434889 [Cucurbita moschata]	[more]
XP_004151587.1	9.3e-54	93.65	uncharacterized protein LOC101218498 [Cucumis sativus]	[more]

BLAST of CmaCh20G010710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49170.1	2.0e-38	69.35	Protein of unknown function (DUF167)	[more]
AT5G63440.2	2.0e-09	30.61	Protein of unknown function (DUF167)	[more]
AT5G63440.3	2.0e-09	30.61	Protein of unknown function (DUF167)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003746	Protein of unknown function DUF167	SMART	SM01152	DUF167_2	coord: 35..111 e-value: 7.2E-27 score: 105.3
IPR003746	Protein of unknown function DUF167	PFAM	PF02594	DUF167	coord: 39..109 e-value: 2.4E-22 score: 78.8
IPR003746	Protein of unknown function DUF167	HAMAP	MF_00634	UPF0235	coord: 35..123 score: 15.00744
IPR036591	YggU-like superfamily	GENE3D	3.30.1200.10		coord: 29..124 e-value: 3.2E-24 score: 86.6
IPR036591	YggU-like superfamily	SUPERFAMILY	69786	YggU-like	coord: 29..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR47817	OS04G0686300 PROTEIN	coord: 1..125

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G010710.1	CmaCh20G010710.1	mRNA