CmaCh20G010250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G010250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	DDT domain-containing protein DDB_G0282237 isoform X2
Location	Cma_Chr20: 7446359 .. 7453743 (+)
RNA-Seq Expression	CmaCh20G010250
Synteny	CmaCh20G010250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCCTGTTGAAAAGAAAGCCGTTTCCCTTGGCTGATTCGCCCAAAGATTTGGAGAACCATGAGCTTGTATATCAAGTTCGGTTCACTAAGGAGGTATTCCGCGATTACAGGTATCCTATTATCCATTCTGCTCATTATCTATTGTTGTTGTTGGTTATAATGTGGAATTTAGGAATGTTAATTTTCTAAAATCTGTTTCGTTTTGGGATAACGAAATTTTTGTTTTTTTATTCCTTAATATGCATCAGTGAGTATCTGAGTAGGATAAATTTATACCGTCGAAGAGTTTGGATGTGTAAGTTCACTGGAAAAAGTAATTTGACATACGAGGAGGCTCTAGTGTCTGAAAAATGTGCTGCAGAGAAGGTTCAGCAGTTCCCAAAAGATCTTATCGTCCCTGCTCTACAGATTATCCAATACAGTGAGAACTAACTTGCTTTACTCAAGAATTGTATTTGTGCATGTGTTTATTTTGTTTAGCTTGATGATAGGATGGTTAAATATTTGCAAATTGAGAACATAGACCTATTGCCTTGAAATTAGCCTTTATGAGTTCTTTTATGTTTCAGGATTCAAGAGTAGGCAATAATACGCAAGTTTTTACTTTTTTCACTTTTACTTTCTTTTCTTCAACCTCAATCTCTATTTAGAAGTTTATAAGCTGAATTGAAAGAAAATTAGTATCATTCGTGTTATCATATCCTCAGCTATATCTAATGCATGATTTGTAACACAGATACGGGCTTCTGTTTTAAACCTTAACTAAATAAGCATGAATTGTTATTAGAATCAATGTGCTCTTGTTCTTCTTCCTCTTTGCTTGTTCTCTTGTTCTTGAATTCTTGCTCCATCCAATTCATCAATTAGACTTCAGCGTTTAACCTGGTACAGGTCTCTCCCATATCTTTCTCCTTTTTTCTAGTTTCTTGTACTTTCCTTTGTTCCCCACTTCTACTTTTTTCACTTTAATTTTCTCGCCAAAGGCAGACCTATAAAAAGGGCTCGAGAAACCCTAACAATAGCTTCCATTGTTACCCATTATTCATTGCCACATCATTTAGAAGGACGAAACCAATTGGCAGTATAGTATTTGTAGGGTGTTCCCCCATACTATTGTGCTTGGTCGTGAGCACTTCAGTAGTCACCAGTTCAAGCAAAAAGCATAGGTGTTGTGGGAACGTGCAGTCAATTGCCTTTTGTGGAGGATGTTTCTAGATTTTTTGGTATTCTTATAGAGACGGGGGTATTTGAGATACCATTTAATTCCAGGGTTCTCTATGGAGCTTTTTCTATGAATACTTAGAGATTATGATTGTTGTTTGGTTAGTGTCAATTGGAAGAATTTTTTGTATCACCTTGATCTTTTTGGGTAGAATGTAGATGTGACTTTTTCATCATCCTTTTTCTTCTTCTCTCTATCAGGATCATTTCATTGCAAATTGAATGTCATTGGCCATAGAACTTCCATTTATTTTGATCCCATCTTTAGCCAACACCAAATTCCTGTAGTGTTTCCTCTCCATGAATTGTTATCCTAATCATATGCTCACCTCTGGAGTCTGGTCCTAAAATCTCTCAATGCCCCATCGAACATAAATCATGTCCTATCATCTTTCTTTTGAATATGTATTGACATATTTTTCTCTTATTGTACTTATTTTCTTTAAATGATGCCTCAGACAGGTTGTTGGTGATAATATAGGTTGCAACTTAAGCTGTTTGATGAATCCGACACCCTCTTATCATTTTTTTTTTTTTTTTTAATGATATCTAACAAAAAGATCGTTGACTTTCTTTCTATTGGCACAAAAATGGAAAACAAAAGAGGGGAATTTTTTTCAACTTTTGGAAAAATGTTTCAAAGCAATTGTGAATACCTTGGAGGAACATTTGAAGTAAAAATGTGTTGGCATTATTATTCAGTGTATAAGTCAAACATGAAACATGGGTAAACTATTAGTGTCATTAGAGGTTTACTCTTTTTAGTGGTGAACTGTTCCATTGGTTGAGTTCTTGATTCCAGGTTTTGCTGTGTGGAGGCTTCATTTTCGGTATTAAACACCACCAGACATGGGAACACTCTGAACATGTTGAAAGAAGTGTCTTCTTTTTTCACTTTATTTTTAAATTTCAAATAATAGACATTTCTCATAGAAAAGAAAATAAAAGAAACGTGGAAAAAGGATATAAATCCATTGCCTATTGTGTTAGATTCTTTGCTTCTACATGGTGTAATCTCACTACACCCTTTGAGCTAGTTCACATTTCTGCCATTTGGGAGCTTTCTTTAACCCTTTTGGTGGGATGAGGATATTTCATCATCCAATTTGTTTGCTTCTCTTTGGTACTAAATTTTCATGTTGCTCACAAAAAAACCAAAAAAATAATAATAGCCCAAGCCCACTGCTAGCAGATATTGTCCGCTTTGGCCTGTTACATATCGCCGTCATCCTCACAATTTTAAAATGCCTCTTTTAGAGTTACACAACGAAACCGGTACTCATCCATATATTATTCTCTTTGGACTTTCCCTTATGAGCTTTCCCATTACGCATCTACTAGGGAGAGGTTTCCACACCCTTATGAGGAATGTTTCATTCCCCTCCCCTACCGATGTGGGATCTCACAATCCACCTCCCTTCGGAGCCCAGTGCTAGTAGATATTATCTGCATAGGCCCAAGCTCACCGCTAGAAGATATTGTTCGATTTGGCCACTATGTATCGTCGTTAGCCTAATGATTTTAAAATGTGTCTTTCAGAGTTACGCAACAGAACTGGTACTCATCCAGATACTGTTCTCTTTGGGCTTTCCCTTCCAGGCTTCCCCTCAAGGTTTTTGGGCTTTCCCTTCCAGGCTTTCCCTTCCAGGCTTTCCCATTACGTATCTTTTAGGGAGAGGTTTTCATACCCTTATAAGGAATGTTTCGTTCCCCTCTCCAACCGATGTGAGATCTCACAAAGAGACTACAATTAAAAGTTCTGTTAGTTATGATTAAGATTAATGGAGTTATCTATTAAATTGGAGACGTGGGGATTTGTCAAAAAAGGGGGAGAGATGATGTGGGGTGGAGGAGGAGATGGTCGTGTAGTGAGCTCTTGTCAGAGTAGGTATAAATAGAAGAACCACATAACTCCACCTTCTCTTTTCGCCTAGTGTCAGTGTAGGACATGTGTCCATGTGTTGGAGACGGACATACTCCAATATGCACACAACAAGTATTCAATACATGAAAGAAGTGTCTGATTATTTTATTATTTTTATTTTCCCAACATGTTGGCTACTCATTCAAGACATGCTAAGGATATGTTAGGGACACATCTAGGACACATTTAAAAGATAAATTTAAATAGTAGACCATTCTCTAGATTAAAAATTCTTATGCCCATTAGGAGTCAAGGTAATAAAAAAGCTTACTTTAAAAAGAAACCTAAACTGAATTTTGTACAAAGAAAAGCACTTGTTTGATTCAAATTTCAAGTTTATTTTGTAAACTTTATTAGGTAATAGATAGGTGGTGTTGTTTATCTCTCATCTTTTATGTCAGCGTAGGGTGTCTATCTCTGTGTTTCTTTGGTATAAAGTATAAGGTACCTATGGATAGGATGGACTGTAATGTGATGATAAGGAGGACATGGGAAGTACAGGTTCTAAAGTGATATTTCCTCGTTTACTAAAGCCTTTGATTACTTGAATCCGATGTTTTAAAATGCTATTCAGAATTAAGCCTTGAAGCTTGCTTCAAGGCAAGACTCTTAACTTCTTAGTGTCAAGACTTACAGCTTCTTTGAACCGTAAGAGGTTCATGCCTTTCATAGAAGAGGCTTAAGCCCTTGTGAAGCCGTACCGAGGCTTAAAGTTTCTACGTCTCGTCTAATGTTTATAAAAATAATATTAACTTGCCTCATTCTCAAAAAATAAAGGTTGAGTTGTGACAACTTGAACTATTACTGTTTTTACTATTGCAACTTCAAAAGCGTTGAAGATTATTATTTTTAGTATAAATCAATCCTACTAATAGTGATAGTAGTGATTTTAAAATATCCTTTTAGAATTTTTATTTAAGTGGCAATTGACGGGAGGTGATTTCTTTTATATTTTCATATGACTATTGCATGTTTAGCGATACTTAATCATCCTAATTTAGGATTTATAAAATGCTTTTAGTTAAATTCATGACTTGTGCCTCATACTACCTCGAAGTGCCGCCTCTTCAAGAGGAAAAGTCCGAAGGCCACCTTTAGCCTTTTAAAACATTGTTTGATCCCAAGTTAGAATTGTGGAACAAATTGTTTGATCCCAATACTGTTATTGGTTAATAACCAGGAGCTTGGTTTTAGGAAATTTAGGTTATGCTGATTGGTGATTGATTATCTGCTGATTAGTTTCAAGTTGTTAGGGCGTTTTGATTCAGTATCTGATTTGATATAATGCTTTTTTTTTGTTTGCTATGAATGATGGAATCTTACTCTGCTACTTCATTTGCAGGCATGTTGTCTCTGAAAGATCTTGCAGACACAATTGCCGTGAAGTTACAGGAGTTTCTGTTTGTTGGTACAGAATTGTATGGAAGGAGGGAAGATCAGATTTATCCATGCAAAATTGTCAAAGTGCTTGAGAATGATGCTGAGGAATTACAATATGAGGTAGTTTGGCTTGACAAAAATAAGAAAGTAACAGAAACGGCATTATTGAATGTAGAGGATTTAGTACAGAAAAAGCCTCCTTTGAGCAGAAGGTTTTTGAAGTCGTTCATTCGGGAATCTACATATCGCAGTGCTCCTTGGGTACTTCATGACAAACTAGCACAAAATCATGGAATTTCAACTGATCTTCCCCAAGAATTAAGAAGCAAAGCCTTTTTCCGTGATGGGCTTTTAGTTTGCAATAAAAAGAGAAAAACTAACGACATGGTAATTTTTGAAGTTTGAATTTGAGGTTTTTAAAGTTTATGGTATTCTCCTGTTGCTATTTCTCATATTTTTCGTCTACAGGAAACAAGTAATCCTGGAAAATGTAAAAGGAGGGACAGGGCGAATGGCTCAACCGCAGAAAATGGTGCAAAGAAAGGTCTGTTTTCTACTTAAATCTCAAGTCTTAGCAAGAAAAGTCCTTACGATTTGTCTTTTATTCTTACTCTCTTCCAACGGTTTTGTCGCTTTCCGTGTTACAAATTTTGAATTCACCATTTTTGCTCTTCTGAATCAGCAGAAGGTCTTGATGAAGATATCAAATATCCAATTGATGATCTCTTAGTGCAGCCTGGTGCGGATGATCCAGTTTTCTCAGAACGACCTTCTCCTTCGAGGGAATTCAAAGTTCCAATGAACTGCGTCGGAGATCTTTTGATGGTTTGGGATGTTTGCTCGTCTTTCAGTCGACTTTTGAACTTGTGGCCATTTTCTCTTGATGATTTTGAGCGTGCTATCTATCACAAAGAAAGTAATGTACCTCTCCTTGTGGAAGCACATTCAGCATATTTCCGTTTGCTTTTAAAAGATAATGGAGAGTATTCCTCACTTGTTGAAGGAAAAAAGCGGAAGATGAAGGTCAGTTCATCACATTGTCTATTTATTTTTCTTTTTTTGAACTTTTTATTTTTTTCGCCGAGAAAAAAGAACTGACATACATTTTTTTTATTTGCAACTTTTCTTTTTTTAAAAAAACCAGATTACATTAGTTAACTGGACAGAGTACCTCTGTGACTTCCTAGAAATGATTGGGAATCCTAAATTATGTGCCAACACTGCAACTATTAAACGAGGTCACTATGGCCTTTTGGATACTTACGTCAAACTGGGAATCTTATGCGAGCTGGTTAATCATTCCCTGGAATCAAATATATTCAGGGAAAAGTTAGATGAAATTATTGAACAGAGGCAGGCACTTGGAGCTACCAGAAGAGGGGAAGCCTTGGAAGAAGGCCGAAAGAGAAGAGAAGAGAAAGAACGCTTGAAATCCGAGCCTATGTCCAATGGACATGTAAATGGGCATCTTACAGATCCCGAAAAGAGCGAAATATCCAAATCTGATCCTGGAAGACGGAGTAAAGATTCATCAAAAAATAGGAATGGAGTGGTTATATCAACTCAAAATGGTCTTTCCCCTGTAAAAAGGTTCGACTTTCTCCATCTGTTTCATGTTAAAATGACGTGATATTCAAGTACTCGACCGTTCTATTTCTTATTTTATTTTACCGTTTTTAGCGAGGATGATCATCCTATTGCTTATTTGAAGAAAATGGCCAAGAAGCGGAATAGTGATGTAACAGTTTCTACTTCTACAAATTCACCAAAGAAGGAAGCAAAGGATCATAGGATGGAAGTTCTTGATAAGAATACCATAAAAGAGAGGGTTCGTTTCATTGGTGTGGGAATTTATGTTTTTGATTATGTGCATGTTAATACAAGCTCCCTAAACATGTGTTCTTATTGTGAAAACAGAGGGAATATTACGAGCGGGAGTTGGAGAAACGCTCGATAAAAACGAATCCCTTGGGTAAAGACAGAAATCATAACAGGTATTGGTGGTTCCGTCGTGATGGAAGGATTTTTGTAGAGAGCTCAGACTCCAAGGAGTGGGGATATTACAGTAGCATAGAAGAGGTATCAGAGCTTTGTACCGTAACTCATTCTTCTAATACTAGGGGCTTACCTATGACTGCTTCATTTGATGTTCTGTTCTCCACTCGACTTTTCGATGCAGCTTGATGCATTTATGGGCTCACTGAATTGCAAGGGGGAGAGAGAGAGAGAACTCGGCAAGCATCTCGAAAAATCTTATAGAAGAATTTGGTAAGTTAGCCATTAATAGCCTGAGACTTATGATACATTTCCCCCTTACATATCATCATGGTGTGCTTGAGATGGGCGAGCATATGTGCAATCTGACGAGATGTATTTTGTTATTGTGGTGTGCTTGCTTGTAAGTCTTGTGTCCATATGAACGGAGAACTCAGTCGGACAAAGCATTACAATCCACTTGGTTCTCTCGTAAATCACTAAAGTTAGAATACATGACTGATGTTACTTCGATCTGATACCTCTTGATTTAAAGTTTCATATTTTCAAATTTGTATTGGCAGCGTTGAACTCAACAAGAGATCGAAGGATATAACTAACCAAATTGCAGCGGAGGAGGCGGTGCTACGACGATCCACACGCGTTCGTGCTCCTCCTAGGGAAAATCCGGCTACTGCGTATCTTAGATATGTTAACAGGTGGAAGGAGGATTGATTGATTGATCCAAAGCTAGTTGAGATATTTTTATGTTTTGTTTCTCCTCAACTTGACATGGTTGGTGGAGATGTGTGTGTGATATAGCGATGGTAACTGAAAGAGAGTGAGGGTGAGAAGTGGGGGAGAAGTGGGGGAGCAGTGGGAA

mRNA sequence

ATGCCCCTGTTGAAAAGAAAGCCGTTTCCCTTGGCTGATTCGCCCAAAGATTTGGAGAACCATGAGCTTGTATATCAAGTTCGGTTCACTAAGGAGGTATTCCGCGATTACAGTGAGTATCTGAGTAGGATAAATTTATACCGTCGAAGAGTTTGGATGTGTAAGTTCACTGGAAAAAGTAATTTGACATACGAGGAGGCTCTAGTGTCTGAAAAATGTGCTGCAGAGAAGGTTCAGCAGTTCCCAAAAGATCTTATCGTCCCTGCTCTACAGATTATCCAATACAGCATGTTGTCTCTGAAAGATCTTGCAGACACAATTGCCGTGAAGTTACAGGAGTTTCTGTTTGTTGGTACAGAATTGTATGGAAGGAGGGAAGATCAGATTTATCCATGCAAAATTGTCAAAGTGCTTGAGAATGATGCTGAGGAATTACAATATGAGGTAGTTTGGCTTGACAAAAATAAGAAAGTAACAGAAACGGCATTATTGAATGTAGAGGATTTAGTACAGAAAAAGCCTCCTTTGAGCAGAAGGTTTTTGAAGTCGTTCATTCGGGAATCTACATATCGCAGTGCTCCTTGGGTACTTCATGACAAACTAGCACAAAATCATGGAATTTCAACTGATCTTCCCCAAGAATTAAGAAGCAAAGCCTTTTTCCGTGATGGGCTTTTAGTTTGCAATAAAAAGAGAAAAACTAACGACATGGAAACAAGTAATCCTGGAAAATGTAAAAGGAGGGACAGGGCGAATGGCTCAACCGCAGAAAATGGTGCAAAGAAAGAAGGTCTTGATGAAGATATCAAATATCCAATTGATGATCTCTTAGTGCAGCCTGGTGCGGATGATCCAGTTTTCTCAGAACGACCTTCTCCTTCGAGGGAATTCAAAGTTCCAATGAACTGCGTCGGAGATCTTTTGATGGTTTGGGATGTTTGCTCGTCTTTCAGTCGACTTTTGAACTTGTGGCCATTTTCTCTTGATGATTTTGAGCGTGCTATCTATCACAAAGAAAGTAATGTACCTCTCCTTGTGGAAGCACATTCAGCATATTTCCGTTTGCTTTTAAAAGATAATGGAGAGTATTCCTCACTTGTTGAAGGAAAAAAGCGGAAGATGAAGATTACATTAGTTAACTGGACAGAGTACCTCTGTGACTTCCTAGAAATGATTGGGAATCCTAAATTATGTGCCAACACTGCAACTATTAAACGAGGTCACTATGGCCTTTTGGATACTTACGTCAAACTGGGAATCTTATGCGAGCTGGTTAATCATTCCCTGGAATCAAATATATTCAGGGAAAAGTTAGATGAAATTATTGAACAGAGGCAGGCACTTGGAGCTACCAGAAGAGGGGAAGCCTTGGAAGAAGGCCGAAAGAGAAGAGAAGAGAAAGAACGCTTGAAATCCGAGCCTATGTCCAATGGACATGTAAATGGGCATCTTACAGATCCCGAAAAGAGCGAAATATCCAAATCTGATCCTGGAAGACGGAGTAAAGATTCATCAAAAAATAGGAATGGAGTGGTTATATCAACTCAAAATGGTCTTTCCCCTGTAAAAAGCGAGGATGATCATCCTATTGCTTATTTGAAGAAAATGGCCAAGAAGCGGAATAGTGATGTAACAGTTTCTACTTCTACAAATTCACCAAAGAAGGAAGCAAAGGATCATAGGATGGAAGTTCTTGATAAGAATACCATAAAAGAGAGGAGGGAATATTACGAGCGGGAGTTGGAGAAACGCTCGATAAAAACGAATCCCTTGGGTAAAGACAGAAATCATAACAGGTATTGGTGGTTCCGTCGTGATGGAAGGATTTTTGTAGAGAGCTCAGACTCCAAGGAGTGGGGATATTACAGTAGCATAGAAGAGCTTGATGCATTTATGGGCTCACTGAATTGCAAGGGGGAGAGAGAGAGAGAACTCGGCAAGCATCTCGAAAAATCTTATAGAAGAATTTGCGTTGAACTCAACAAGAGATCGAAGGATATAACTAACCAAATTGCAGCGGAGGAGGCGGTGCTACGACGATCCACACGCGTTCGTGCTCCTCCTAGGGAAAATCCGGCTACTGCGTATCTTAGATATGTTAACAGGTGGAAGGAGGATTGATTGATTGATCCAAAGCTAGTTGAGATATTTTTATGTTTTGTTTCTCCTCAACTTGACATGGTTGGTGGAGATGTGTGTGTGATATAGCGATGGTAACTGAAAGAGAGTGAGGGTGAGAAGTGGGGGAGAAGTGGGGGAGCAGTGGGAA

Coding sequence (CDS)

ATGCCCCTGTTGAAAAGAAAGCCGTTTCCCTTGGCTGATTCGCCCAAAGATTTGGAGAACCATGAGCTTGTATATCAAGTTCGGTTCACTAAGGAGGTATTCCGCGATTACAGTGAGTATCTGAGTAGGATAAATTTATACCGTCGAAGAGTTTGGATGTGTAAGTTCACTGGAAAAAGTAATTTGACATACGAGGAGGCTCTAGTGTCTGAAAAATGTGCTGCAGAGAAGGTTCAGCAGTTCCCAAAAGATCTTATCGTCCCTGCTCTACAGATTATCCAATACAGCATGTTGTCTCTGAAAGATCTTGCAGACACAATTGCCGTGAAGTTACAGGAGTTTCTGTTTGTTGGTACAGAATTGTATGGAAGGAGGGAAGATCAGATTTATCCATGCAAAATTGTCAAAGTGCTTGAGAATGATGCTGAGGAATTACAATATGAGGTAGTTTGGCTTGACAAAAATAAGAAAGTAACAGAAACGGCATTATTGAATGTAGAGGATTTAGTACAGAAAAAGCCTCCTTTGAGCAGAAGGTTTTTGAAGTCGTTCATTCGGGAATCTACATATCGCAGTGCTCCTTGGGTACTTCATGACAAACTAGCACAAAATCATGGAATTTCAACTGATCTTCCCCAAGAATTAAGAAGCAAAGCCTTTTTCCGTGATGGGCTTTTAGTTTGCAATAAAAAGAGAAAAACTAACGACATGGAAACAAGTAATCCTGGAAAATGTAAAAGGAGGGACAGGGCGAATGGCTCAACCGCAGAAAATGGTGCAAAGAAAGAAGGTCTTGATGAAGATATCAAATATCCAATTGATGATCTCTTAGTGCAGCCTGGTGCGGATGATCCAGTTTTCTCAGAACGACCTTCTCCTTCGAGGGAATTCAAAGTTCCAATGAACTGCGTCGGAGATCTTTTGATGGTTTGGGATGTTTGCTCGTCTTTCAGTCGACTTTTGAACTTGTGGCCATTTTCTCTTGATGATTTTGAGCGTGCTATCTATCACAAAGAAAGTAATGTACCTCTCCTTGTGGAAGCACATTCAGCATATTTCCGTTTGCTTTTAAAAGATAATGGAGAGTATTCCTCACTTGTTGAAGGAAAAAAGCGGAAGATGAAGATTACATTAGTTAACTGGACAGAGTACCTCTGTGACTTCCTAGAAATGATTGGGAATCCTAAATTATGTGCCAACACTGCAACTATTAAACGAGGTCACTATGGCCTTTTGGATACTTACGTCAAACTGGGAATCTTATGCGAGCTGGTTAATCATTCCCTGGAATCAAATATATTCAGGGAAAAGTTAGATGAAATTATTGAACAGAGGCAGGCACTTGGAGCTACCAGAAGAGGGGAAGCCTTGGAAGAAGGCCGAAAGAGAAGAGAAGAGAAAGAACGCTTGAAATCCGAGCCTATGTCCAATGGACATGTAAATGGGCATCTTACAGATCCCGAAAAGAGCGAAATATCCAAATCTGATCCTGGAAGACGGAGTAAAGATTCATCAAAAAATAGGAATGGAGTGGTTATATCAACTCAAAATGGTCTTTCCCCTGTAAAAAGCGAGGATGATCATCCTATTGCTTATTTGAAGAAAATGGCCAAGAAGCGGAATAGTGATGTAACAGTTTCTACTTCTACAAATTCACCAAAGAAGGAAGCAAAGGATCATAGGATGGAAGTTCTTGATAAGAATACCATAAAAGAGAGGAGGGAATATTACGAGCGGGAGTTGGAGAAACGCTCGATAAAAACGAATCCCTTGGGTAAAGACAGAAATCATAACAGGTATTGGTGGTTCCGTCGTGATGGAAGGATTTTTGTAGAGAGCTCAGACTCCAAGGAGTGGGGATATTACAGTAGCATAGAAGAGCTTGATGCATTTATGGGCTCACTGAATTGCAAGGGGGAGAGAGAGAGAGAACTCGGCAAGCATCTCGAAAAATCTTATAGAAGAATTTGCGTTGAACTCAACAAGAGATCGAAGGATATAACTAACCAAATTGCAGCGGAGGAGGCGGTGCTACGACGATCCACACGCGTTCGTGCTCCTCCTAGGGAAAATCCGGCTACTGCGTATCTTAGATATGTTAACAGGTGGAAGGAGGATTGA

Protein sequence

MPLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKSNLTYEEALVSEKCAAEKVQQFPKDLIVPALQIIQYSMLSLKDLADTIAVKLQEFLFVGTELYGRREDQIYPCKIVKVLENDAEELQYEVVWLDKNKKVTETALLNVEDLVQKKPPLSRRFLKSFIRESTYRSAPWVLHDKLAQNHGISTDLPQELRSKAFFRDGLLVCNKKRKTNDMETSNPGKCKRRDRANGSTAENGAKKEGLDEDIKYPIDDLLVQPGADDPVFSERPSPSREFKVPMNCVGDLLMVWDVCSSFSRLLNLWPFSLDDFERAIYHKESNVPLLVEAHSAYFRLLLKDNGEYSSLVEGKKRKMKITLVNWTEYLCDFLEMIGNPKLCANTATIKRGHYGLLDTYVKLGILCELVNHSLESNIFREKLDEIIEQRQALGATRRGEALEEGRKRREEKERLKSEPMSNGHVNGHLTDPEKSEISKSDPGRRSKDSSKNRNGVVISTQNGLSPVKSEDDHPIAYLKKMAKKRNSDVTVSTSTNSPKKEAKDHRMEVLDKNTIKERREYYERELEKRSIKTNPLGKDRNHNRYWWFRRDGRIFVESSDSKEWGYYSSIEELDAFMGSLNCKGERERELGKHLEKSYRRICVELNKRSKDITNQIAAEEAVLRRSTRVRAPPRENPATAYLRYVNRWKED

Homology

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BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot
Match: Q54ST3 (DDT domain-containing protein DDB_G0282237 OS=Dictyostelium discoideum OX=44689 GN=DDB_G0282237 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 4.0e-32
Identity = 201/906 (22.19%), Postives = 363/906 (40.07%), Query Frame = 0


Query: 1   MPLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKS 60
           MPL  + PF L  +   +++ E  + ++FTKE F+ Y +Y+ R  LYR+++W C  TGK 
Sbjct: 1   MPLHGKDPFEL--NKTRVKSGEEYFVIKFTKEHFKRYKDYIDRYELYRQKIWTCSITGKQ 60

Query: 61  NLTYEEALVSEKCAAEKVQQFPKDLIVPALQIIQYSMLSLKDLADTIAVKLQEFLFVGTE 120
           NLT+EEAL+SEK A+EKV +  + L+   L+ IQY  ++L+++ + +   L    + G  
Sbjct: 61  NLTFEEALLSEKNASEKVSKVSELLLPHCLEFIQYKEITLEEMTNQLYEFLLMNYYPGEI 120

Query: 121 LYGRREDQIYPCKIVKVLENDAE------------------------------------- 180
           +  ++ +  Y  +I+++LEN  E                                     
Sbjct: 121 VSFKKANVKYTGRIIELLENYNESDEQSDNEQQKKSSSSSSTTTTTTTPTTPPTTTTTTS 180

Query: 181 --------------ELQYEVVWLDKNKKVTE----------------------------- 240
                         E++ ++   D+N++  E                             
Sbjct: 181 SSINALSAIPIPKKEIKLQLYSDDENEEEDEKNNGDTSSDKKGEKEKEKEKEKEKEKEKE 240

Query: 241 --------------------------------------------------TALLNVEDLV 300
                                                               ++N++D+ 
Sbjct: 241 KEKEKEKEKEKEKEKEKDSDTKSVRKYVDPRKKLDSIKKYYKIYVDSQGKNFIINIKDIQ 300

Query: 301 QKKPPLSRRFLKSFI----RESTYRSAPWVLHDKLAQNH---------GISTDLPQELRS 360
           +++PP+ +  +K  I    +++ +    W +  +L + +          +  ++ Q L+ 
Sbjct: 301 KREPPIFKPMVKDTIKTVAKKTKHLGGFWEVEPELIKKYNLEGLKIPSSVRKEVEQHLKR 360

Query: 361 KAFFRDGLLVCNKKRKTNDMETSNPGKCKRRDRANGS-TAENGAKKEGLDEDIKYPIDDL 420
           K    DG ++ + + ++ D+E+++         +N +  + + ++ E   +  KYPI+D 
Sbjct: 361 KR-IADGEILEDTEEESVDIESNDNSNSNGNSNSNNNLDSSDESETERKRKRPKYPIEDQ 420

Query: 421 LV-QPGADDPVFSERPSPSREFKVPMNCVGDLLMVWDVCSSFSRLLNLWPFSLDDFERAI 480
            V +   +    +ERP  S +F    N  GD LMVW   + F ++L L PF LDDFE AI
Sbjct: 421 DVDRENEETGKENERPIASSDFFCLSNTFGDFLMVWHFLNHFEKVLLLSPFPLDDFEMAI 480

Query: 481 -YHKESNVPLLVEAH----SAYFRLLLKDNGEYSSLVEGKKRKMKITLVNWTEYLCDFLE 540
            +H E+N+  LVE+H       F L    +G       GK     IT  NW   L  + +
Sbjct: 481 QHHTETNI--LVESHIRLMKTIFTLPSYSSGTPKKTFGGK----AITDRNWLATLRAYFQ 540

Query: 541 MIGNPKLCANTATIKRGHYGLLD--TYVKLGILCELVNHSLESNIFREKLDE-------I 600
                K  A     K+     L+      L +  EL     E +    KLDE        
Sbjct: 541 --NEVKRIAIEEKEKQEKLKQLEEQNIRMLNLANELPGSDDEDD--EMKLDEDGNEIKKD 600

Query: 601 IEQRQALGATRRGEALEEGRKRREEKERLKSEPMSNGHVNGHLTDPEKSEISKSDPGRRS 660
           +E +   G     +  EE  +  EE+E  + E  S+    G     E++EI  S      
Sbjct: 601 VEMKDNDGTKDTKKDDEENEEEEEEEEEEEEEVASD---EGEEEWKEENEIITSADANTI 660

Query: 661 KDSSKNRNGVVISTQNGL--------SPVKSE------------------DDHPIAYLKK 704
               K +N   +S +  +          + SE                  +   I   +K
Sbjct: 661 CKVLKKKNYFKLSVEERIYILAYLVKQTIASEKIRKHLEKNVELGNEVKQEKKGIILEEK 720

[Close]

BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot
Match: Q9NRL2 (Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens OX=9606 GN=BAZ1A PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 1.4e-16
Identity = 54/140 (38.57%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 1   MPLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKS 60
           MPLL RKPF     P DL   E V+  + T E+FR Y ++  R  L    VW C  TG+ 
Sbjct: 1   MPLLHRKPFVRQKPPADLRPDEEVFYCKVTNEIFRHYDDFFERTILCNSLVWSCAVTGRP 60

Query: 61  NLTYEEALVSEKCAAEKVQQFPKDLIVPALQIIQYSMLS-LKDLADTIAVKLQEFLFV-G 120
            LTY+EAL SEK A + +Q FP+ LI+P L +   +  S L ++ D I   +++  FV  
Sbjct: 61  GLTYQEALESEKKARQNLQSFPEPLIIPVLYLTSLTHRSRLHEICDDIFAYVKDRYFVEE 120

Query: 121 TELYGRREDQIYPCKIVKVL 139
           T    R       C+I++VL
Sbjct: 121 TVEVIRNNGARLQCRILEVL 140

[Close]

BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot
Match: O88379 (Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus OX=10090 GN=Baz1a PE=1 SV=3)

HSP 1 Score: 88.6 bits (218), Expect = 3.1e-16
Identity = 53/140 (37.86%), Postives = 75/140 (53.57%), Query Frame = 0


Query: 1   MPLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKS 60
           MPLL RKPF     P DL   E V+  + T E+FR Y ++  R  L    VW C  TG+ 
Sbjct: 1   MPLLHRKPFVRQKPPGDLRPDEEVFYCKVTNEIFRHYDDFFERTILCNSLVWSCAVTGRP 60

Query: 61  NLTYEEALVSEKCAAEKVQQFPKDLIVPALQIIQYSMLS-LKDLADTIAVKLQEFLFV-G 120
            LTY+EAL SE+ A + +Q FP+ LI+P L +   +  S L ++ D I   +++  FV  
Sbjct: 61  GLTYQEALESERKARQNLQSFPEPLIIPVLYLTNLTRRSRLHEICDDIFAYVKDRYFVEE 120

Query: 121 TELYGRREDQIYPCKIVKVL 139
           T    R       C+I++VL
Sbjct: 121 TVEVIRNNGTRLQCRILEVL 140

[Close]

BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot
Match: Q9UIG0 (Tyrosine-protein kinase BAZ1B OS=Homo sapiens OX=9606 GN=BAZ1B PE=1 SV=2)

HSP 1 Score: 78.2 bits (191), Expect = 4.2e-13
Identity = 53/147 (36.05%), Postives = 81/147 (55.10%), Query Frame = 0


Query: 2   PLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKSN 61
           PLL RKPFPL    K L   E ++ +  T+E FR   EY +R+  Y  R+W CK TG S 
Sbjct: 3   PLLGRKPFPLV---KPLPGEEPLFTIPHTQEAFRTREEYEARLERYSERIWTCKSTGSSQ 62

Query: 62  LTYEEALVSEKCAAEKV-QQFPKDLIVPALQIIQYSMLSLKDLADTIAVKLQEFLFVGTE 121
           LT++EA   E+  AE + ++FP       L+++ ++  SL+ L DT  +++     VG E
Sbjct: 63  LTHKEAWEEEQEVAELLKEEFPAWYEKLVLEMVHHNTASLEKLVDTAWLEIMTKYAVGEE 122

Query: 122 L-YGRREDQIYPCKIVKV--LENDAEE 145
             +   ++++   KIVK+  LE   EE
Sbjct: 123 CDFEVGKEKMLKVKIVKIHPLEKVDEE 146

[Close]

BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot
Match: A2BIL7 (Tyrosine-protein kinase BAZ1B OS=Danio rerio OX=7955 GN=baz1b PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 7.2e-13
Identity = 53/150 (35.33%), Postives = 80/150 (53.33%), Query Frame = 0


Query: 2   PLLKRKPFPLADSPKDLEN-HELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKS 61
           PLL RKP+PL     +     E VY +  TKE FR+  EY +R+  Y  R+W CK TG S
Sbjct: 3   PLLGRKPYPLVKPLSEPPGPGEEVYTIEHTKEAFRNKEEYEARLRRYGERIWTCKSTGSS 62

Query: 62  NLTYEEALVSEKCAAEKVQ-QFPKDLIVPALQIIQYSMLSLKDLADTIAVKLQEFLFVGT 121
            LT++EA   E+   E +Q ++P     P L+I+ ++ + L  L D + V++     VG 
Sbjct: 63  QLTHKEAWEEEQEVTELLQEEYPVWFEKPVLEIVHHNTVPLDKLVDQVWVEILTKYAVGE 122

Query: 122 E---LYGRREDQIYPCKIVKV--LENDAEE 145
           +   + G   D+    ++VK+  LEN  EE
Sbjct: 123 KCDLMVG--NDKTLSVEVVKIHPLENPPEE 150

[Close]

BLAST of CmaCh20G010250 vs. TAIR 10
Match: AT5G08630.1 (DDT domain-containing protein )

HSP 1 Score: 680.6 bits (1755), Expect = 1.3e-195
Identity = 375/739 (50.74%), Postives = 502/739 (67.93%), Query Frame = 0


Query: 1   MPLLKRKPFPLADSPKDLENHELVYQVRFTKEVFRDYSEYLSRINLYRRRVWMCKFTGKS 60
           MPLLK+K   L + PK+LE  ELVYQVR T E+FRDY  YL R+NLYR RVW CK TGK+
Sbjct: 1   MPLLKKKSHKLLEPPKNLEPQELVYQVRLTNEIFRDYQLYLKRLNLYRNRVWTCKSTGKT 60

Query: 61  NLTYEEALVSEKCAAEKVQQFPKDLIVPALQIIQYSMLSLKDLADTIAVKLQEFLFVGTE 120
           +L+YEEAL SEK A +KVQ  P++L+ PAL+IIQ+S LSLKDLAD IA +LQ+  F G E
Sbjct: 61  SLSYEEALDSEKLAGKKVQTLPRELVAPALRIIQFSTLSLKDLADKIATELQDCFFPGAE 120

Query: 121 LYGRREDQIYPCKIVKVLENDAEELQYEVVWLDKNKKVTETALLNVEDLVQKKPPLSRRF 180
           LYG R+ +++PCKI++++ +   + QYEV +LDKNK+V +  +L  EDL  KK P SR F
Sbjct: 121 LYGERDGELHPCKILRIVSDGDSKPQYEVGFLDKNKEVDDNTVLFGEDLSWKKFPFSRNF 180

Query: 181 LKSFIRESTYRSAPWVLHDKLAQNHGISTDLPQELRSKAFFRDGLLVCNKKRKTNDMETS 240
           LKSFIR+ST  S PWV++D LA+ H I+  +P+EL++K  F++G LV  ++RK  D    
Sbjct: 181 LKSFIRDSTCHSIPWVVNDYLAKAHEITRKIPKELQNKYVFQNGELV--QQRKQEDKTGR 240

Query: 241 NPGKCKRRDRANGSTAENGAKKEGLDED-IKYPIDDLLVQPGADDPVFSERPSPSREFKV 300
              K KR +       E   +  G +E+ I YPI+DLL+ P   DP  ++RPSPSR+F V
Sbjct: 241 ENRKRKRAENGKHVAEETDREVNGSEEEAINYPIEDLLLPP---DPDVTQRPSPSRDFSV 300

Query: 301 PMNCVGDLLMVWDVCSSFSRLLNLWPFSLDDFERAIYHKESNVPLLVEAHSAYFRLLLKD 360
           PM+CVGDLLMVWD C+SF R L+LW FSL+DFE A+ HKESN+ L++E H++ FR L+ +
Sbjct: 301 PMDCVGDLLMVWDFCTSFGRQLHLWRFSLEDFENAVCHKESNLVLIMEVHASLFRFLINE 360

Query: 361 NGEYSSLVEGKKRKMKITLVNWTEYLCDFLEMIGNPKLCANTATIKRGHYGLLDTYVKLG 420
            G+    ++ + RK KITL+ W EYLCDFLE +  P LC +  TIKRGHYGLLD  VKL 
Sbjct: 361 RGDSFKALQRRSRKSKITLITWAEYLCDFLESVNTPDLCFDVGTIKRGHYGLLDPNVKLK 420

Query: 421 ILCELVNHSLESNIFREKLDEIIEQRQALGATRRGEALEEGRKRREEKERLKSEPMSNGH 480
           IL ELVNH  E+ +F+ ++DE++EQR ALGA RR EAL E R+ REEKER K+   +NG 
Sbjct: 421 ILRELVNHITETGMFKGEIDELVEQRHALGAARREEALAEARQIREEKERSKTGEEANGV 480

Query: 481 VNGHLTDPEKSE---ISKSDPGRRSKDS---SKNRNGVVISTQNGLSPVKSEDDHPI--A 540
           ++ +  + +K+    +  S+  ++++ +   SK  NG V S++N    ++  +   I   
Sbjct: 481 LDNNRLEKKKNSAQVLESSEDSKKNESTAGGSKMENGSV-SSEN----IEKSEKRLIGNV 540

Query: 541 YLKKMAKKRNSDVTVSTSTNSPKKEAKDHRME------------------------VLDK 600
           YL+K  K++ +D  +      PK+E +D + E                          ++
Sbjct: 541 YLRK-HKRQMTDTKI-----EPKEEEEDEKAEEDEEEKGFSVKKQEVKSASEDEKGTFER 600

Query: 601 NTIKERREYYERELEKRSIKTNPLGKDRNHNRYWWFRRDGRIFVESSDSKEWGYYSSIEE 660
              ++RR+YYERE+EK  I+TNPLGKDR++NRYWWFR +GRIFVE+SDS+EWGYY++ EE
Sbjct: 601 RGPEQRRQYYEREMEKIVIRTNPLGKDRDYNRYWWFRSNGRIFVENSDSEEWGYYTAKEE 660

Query: 661 LDAFMGSLNCKGERERELGKHLEKSYRRICVELNKRSKDITNQIAAEEAVLRRSTRVRAP 707
           LDA MGSLN KGERE  L   LE  Y RIC  L KR+KDI + I  EEAV+RRSTRVRAP
Sbjct: 661 LDALMGSLNRKGERELSLYTQLEIFYDRICSTLQKRTKDIAHNIEMEEAVVRRSTRVRAP 720

[Close]

BLAST of CmaCh20G010250 vs. TAIR 10
Match: AT1G28420.1 (homeobox-1 )

HSP 1 Score: 53.5 bits (127), Expect = 7.9e-07
Identity = 30/78 (38.46%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 291 PSPSREFKVPM---------NCVGDLLMVWDVCSSFSRLLNLWPFSLDDFERAIYHKESN 350
           P  S + K+P            VG+LLMVW    SFS +L+LWPF+LD+F +A +  +S 
Sbjct: 530 PPKSLQLKMPFAISPWKDSDETVGNLLMVWRFLISFSDVLDLWPFTLDEFIQAFHDYDSR 589

Query: 351 VPLLVEAHSAYFRLLLKD 360
             LL E H    R +++D
Sbjct: 590 --LLGEIHVTLLRSIIRD 605

[Close]

BLAST of CmaCh20G010250 vs. TAIR 10
Match: AT5G44180.1 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-04
Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 304 VGDLLMVWDVCSSFSRLLNLWPFSLDDFERAIYHKESNVPLLVEAHSAYFRLLLKD 360
           V +LLMVW    +F+ +L LWPF+LD+F +A +  +    L+ E H    + ++KD
Sbjct: 517 VANLLMVWRFLITFADVLGLWPFTLDEFAQAFHDYDPR--LMGEIHIVLLKTIIKD 570

[Close]

BLAST of CmaCh20G010250 vs. TAIR 10
Match: AT5G44180.2 (Homeodomain-like transcriptional regulator )

HSP 1 Score: 46.2 bits (108), Expect = 1.3e-04
Identity = 21/56 (37.50%), Postives = 34/56 (60.71%), Query Frame = 0


Query: 304 VGDLLMVWDVCSSFSRLLNLWPFSLDDFERAIYHKESNVPLLVEAHSAYFRLLLKD 360
           V +LLMVW    +F+ +L LWPF+LD+F +A +  +    L+ E H    + ++KD
Sbjct: 517 VANLLMVWRFLITFADVLGLWPFTLDEFAQAFHDYDPR--LMGEIHIVLLKTIIKD 570

The following BLAST results are available for this feature:

BLAST of CmaCh20G010250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54ST3	4.0e-32	22.19	DDT domain-containing protein DDB_G0282237 OS=Dictyostelium discoideum OX=44689 ...	[more]
Q9NRL2	1.4e-16	38.57	Bromodomain adjacent to zinc finger domain protein 1A OS=Homo sapiens OX=9606 GN...	[more]
O88379	3.1e-16	37.86	Bromodomain adjacent to zinc finger domain protein 1A OS=Mus musculus OX=10090 G...	[more]
Q9UIG0	4.2e-13	36.05	Tyrosine-protein kinase BAZ1B OS=Homo sapiens OX=9606 GN=BAZ1B PE=1 SV=2	[more]
A2BIL7	7.2e-13	35.33	Tyrosine-protein kinase BAZ1B OS=Danio rerio OX=7955 GN=baz1b PE=1 SV=2	[more]

BLAST of CmaCh20G010250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08630.1	1.3e-195	50.74	DDT domain-containing protein	[more]
AT1G28420.1	7.9e-07	38.46	homeobox-1	[more]
AT5G44180.1	1.3e-04	37.50	Homeodomain-like transcriptional regulator	[more]
AT5G44180.2	1.3e-04	37.50	Homeodomain-like transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018501	DDT domain	SMART	SM00571	testlast3	coord: 301..362 e-value: 8.7E-16 score: 68.4
IPR018501	DDT domain	PFAM	PF02791	DDT	coord: 303..359 e-value: 5.0E-15 score: 55.6
IPR018501	DDT domain	PROSITE	PS50827	DDT	coord: 301..362 score: 15.590919
IPR028941	WHIM2 domain	PFAM	PF15613	WSD	coord: 587..652 e-value: 2.0E-19 score: 69.8
IPR013136	WSTF/Acf1/Cbp146	PFAM	PF10537	WAC_Acf1_DNA_bd	coord: 24..119 e-value: 1.0E-26 score: 93.4
IPR013136	WSTF/Acf1/Cbp146	PROSITE	PS51136	WAC	coord: 22..128 score: 38.749664
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 507..522
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 542..561
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 484..506
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 452..474
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 449..525
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..264
None	No IPR available	PANTHER	PTHR15546	BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2A	coord: 1..704

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G010250.1	CmaCh20G010250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus