CmaCh20G008000 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh20G008000
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionAuxin-responsive protein
LocationCma_Chr20: 3759823 .. 3760269 (-)
RNA-Seq ExpressionCmaCh20G008000
SyntenyCmaCh20G008000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTCGGTGATGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGCAAGAAGGCACGAGCAGCGGCCTCCAGAGCACCGCCGCCTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGCGGCTGTCGGCGATTCATCGTCCGTGCGTCCTTCTTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTCTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTACAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

mRNA sequence

ATGTCGTCGGTGATGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGCAAGAAGGCACGAGCAGCGGCCTCCAGAGCACCGCCGCCTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGCGGCTGTCGGCGATTCATCGTCCGTGCGTCCTTCTTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTCTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTACAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

Coding sequence (CDS)

ATGTCGTCGGTGATGGCGAAAAGCAACAAGATCCGGAGCATTGTCCGGCTCCGACAAATGTTACAACACTGGCGCAAGAAGGCACGAGCAGCGGCCTCCAGAGCACCGCCGCCTGATGTCCCCGCTGATCACGTTGCCGTATGCGTTGGCAGCGGCTGTCGGCGATTCATCGTCCGTGCGTCCTTCTTGAACCATCCGATCTTCCGGAAGTTGCTCTCACAGGCTGAAGAGGAATACGGCTTCGCTACGCGAGGTCCTCTGGCGCTTCCGTGCGACGAATCGGTCTTCGAAGAGGTTATCCGAGTCATTGCTCGCTCCGAGTTGAATAACTCGTCGCGAAGTTCGAGTATCAAGGATTTACAGAGGCGATGCGATAAAGATGTCAGAAAAAACCTCGAGTATTTAGGCGAATCGAGACCTTTACTGTACGGATTCGCTGATAGTTGA

Protein sequence

MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDLQRRCDKDVRKNLEYLGESRPLLYGFADS
Homology
BLAST of CmaCh20G008000 vs. ExPASy Swiss-Prot
Match: O65695 (Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.4e-11
Identity = 40/105 (38.10%), Postives = 57/105 (54.29%), Query Frame = 0

Query: 3   SVMAKSNKIRSIVRLRQMLQH----WRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIV 62
           ++M K++K+     L+Q+L+      +K          P DVP  H  V VG    R+IV
Sbjct: 2   AIMKKTSKLTQTAMLKQILKRCSSLGKKNGGGYDEDCLPLDVPKGHFPVYVGENRSRYIV 61

Query: 63  RASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVI 104
             SFL HP F+ LL +AEEE+GF     L +PCDE VF+ +  +I
Sbjct: 62  PISFLTHPEFQSLLQRAEEEFGFDHDMGLTIPCDELVFQTLTSMI 106

BLAST of CmaCh20G008000 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.1e-11
Identity = 37/98 (37.76%), Postives = 52/98 (53.06%), Query Frame = 0

Query: 17  LRQMLQHWRKKARAAASRAPPP-----------DVPADHVAVCVGSGCRRFIVRASFLNH 76
           +R+    +R +       APPP            VPA HV V VG    RF+V A  +NH
Sbjct: 20  IRRSTSSFRNRRGHHRLHAPPPPWSICPARRVNTVPAGHVPVYVGEEMERFVVSAELMNH 79

Query: 77  PIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVI 104
           PIF  LL+++ +EYG+A +G L +PC   VFE V+  +
Sbjct: 80  PIFVGLLNRSAQEYGYAQKGVLHIPCHVIVFERVVETL 117

BLAST of CmaCh20G008000 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-10
Identity = 34/87 (39.08%), Postives = 53/87 (60.92%), Query Frame = 0

Query: 26  KKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRG 85
           K+A  A+S      VP+ HV V VG    RF+V A  LNHP+F  LL+++ +EYG+  +G
Sbjct: 40  KRATVASS------VPSGHVPVNVGEDKERFVVSAELLNHPVFVGLLNRSAQEYGYTQKG 99

Query: 86  PLALPCDESVFEEVIRVIARSELNNSS 113
            L +PC+  VFE+V+  +     +++S
Sbjct: 100 VLHIPCNVFVFEQVVESLRSGIADDTS 120

BLAST of CmaCh20G008000 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 0

Query: 40  VPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEV 99
           VP  HV V VG    RF+V A  LNHP+F  LL Q+ +EYG+  +G L +PC   VFE +
Sbjct: 38  VPEGHVPVYVGHEMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVFERI 97

Query: 100 I 101
           +
Sbjct: 98  L 98

BLAST of CmaCh20G008000 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-10
Identity = 29/68 (42.65%), Postives = 41/68 (60.29%), Query Frame = 0

Query: 33  SRAPPPDVPADHVAVCVGSGCRRFIVRASFLNHPIFRKLLSQAEEEYGFATRGPLALPCD 92
           S+     VP  HV V VG    RF+V A  LNHP+F  LL+++ +EYG+  +G L +PC 
Sbjct: 43  SKKQTSSVPEGHVPVYVGDEMERFVVSAELLNHPVFIGLLNRSAQEYGYEQKGVLQIPCH 102

Query: 93  ESVFEEVI 101
             VFE ++
Sbjct: 103 VLVFERIM 110

BLAST of CmaCh20G008000 vs. ExPASy TrEMBL
Match: A0A6J1JBR0 (auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484316 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 3.8e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 149
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

BLAST of CmaCh20G008000 vs. ExPASy TrEMBL
Match: A0A6J1FXH8 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111448496 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.4e-76
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSS+KDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSLKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 149
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

BLAST of CmaCh20G008000 vs. ExPASy TrEMBL
Match: A0A0A0LM48 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 7.6e-61
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKARAAA  APP DVPA H+AVCVG+GCRRFIVR 
Sbjct: 70  MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 129

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIF KLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+A SEL+NSSR+S++KDL
Sbjct: 130 TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 189

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 149
            RRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 190 TRRCDEDVRSKNLEFLGESRPLLYGFSDN 218

BLAST of CmaCh20G008000 vs. ExPASy TrEMBL
Match: A0A5A7TQK8 (Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00010 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 119/149 (79.87%), Postives = 136/149 (91.28%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKAR AASRAPP DVPA H+AVCVG+GCRRFIV  
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFR+LLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+N+SR+S++KDL
Sbjct: 61  TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 149
            RRCD+DVR KNLE+LGES PLLYGF+D+
Sbjct: 121 TRRCDEDVRSKNLEFLGESSPLLYGFSDN 149

BLAST of CmaCh20G008000 vs. ExPASy TrEMBL
Match: A0A1S3C5H3 (auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 1.0e-60
Identity = 119/149 (79.87%), Postives = 136/149 (91.28%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKAR AASRAPP DVPA H+AVCVG+GCRRFIV  
Sbjct: 51  MSPETSKSHKIRRIVRLRQMLQHWRKKARVAASRAPPSDVPAGHIAVCVGTGCRRFIVPT 110

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFR+LLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+N+SR+S++KDL
Sbjct: 111 TFLNHPIFRQLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNTSRTSNLKDL 170

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 149
            RRCD+DVR KNLE+LGES PLLYGF+D+
Sbjct: 171 TRRCDEDVRSKNLEFLGESSPLLYGFSDN 199

BLAST of CmaCh20G008000 vs. NCBI nr
Match: XP_022986631.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 7.8e-76
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 149
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

BLAST of CmaCh20G008000 vs. NCBI nr
Match: XP_022943918.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG6571069.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010881.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.3e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSS+KDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSLKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 149
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

BLAST of CmaCh20G008000 vs. NCBI nr
Match: XP_023512602.1 (auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 289.3 bits (739), Expect = 1.9e-74
Identity = 146/148 (98.65%), Postives = 147/148 (99.32%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MSSV+AKSNKIRSIVRLRQMLQHWRKKARAAASRAPP DVPADHVAVCVGSGCRRFIVRA
Sbjct: 1   MSSVVAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPTDVPADHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL
Sbjct: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120

Query: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 149
           QRRCDKDVRKNLEYLGESRPLLYGFADS
Sbjct: 121 QRRCDKDVRKNLEYLGESRPLLYGFADS 148

BLAST of CmaCh20G008000 vs. NCBI nr
Match: XP_038902037.1 (auxin-responsive protein SAUR71-like [Benincasa hispida])

HSP 1 Score: 256.1 bits (653), Expect = 1.8e-64
Identity = 128/149 (85.91%), Postives = 140/149 (93.96%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KSNKIR IVRLRQMLQHWRKKARAAA RAPP DVPA HVAVCVGSGCRRFIVRA
Sbjct: 1   MSLDTSKSNKIRRIVRLRQMLQHWRKKARAAAYRAPPSDVPAGHVAVCVGSGCRRFIVRA 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIFRKLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+ARSEL+NSSR+S++KDL
Sbjct: 61  TFLNHPIFRKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVARSELSNSSRNSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 149
           QRRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 121 QRRCDEDVRIKNLEFLGESRPLLYGFSDN 149

BLAST of CmaCh20G008000 vs. NCBI nr
Match: XP_004147056.1 (auxin-induced protein X10A [Cucumis sativus])

HSP 1 Score: 243.0 bits (619), Expect = 1.6e-60
Identity = 120/149 (80.54%), Postives = 135/149 (90.60%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAASRAPPPDVPADHVAVCVGSGCRRFIVRA 60
           MS   +KS+KIR IVRLRQMLQHWRKKARAAA  APP DVPA H+AVCVG+GCRRFIVR 
Sbjct: 1   MSPETSKSHKIRRIVRLRQMLQHWRKKARAAACTAPPSDVPAGHIAVCVGTGCRRFIVRT 60

Query: 61  SFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKDL 120
           +FLNHPIF KLLSQAEEEYGF TRGPLALPCDESVFEEV+RV+A SEL+NSSR+S++KDL
Sbjct: 61  TFLNHPIFLKLLSQAEEEYGFETRGPLALPCDESVFEEVLRVVAHSELSNSSRTSNLKDL 120

Query: 121 QRRCDKDVR-KNLEYLGESRPLLYGFADS 149
            RRCD+DVR KNLE+LGESRPLLYGF+D+
Sbjct: 121 TRRCDEDVRSKNLEFLGESRPLLYGFSDN 149

BLAST of CmaCh20G008000 vs. TAIR 10
Match: AT1G19840.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 169.1 bits (427), Expect = 2.7e-42
Identity = 88/150 (58.67%), Postives = 113/150 (75.33%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKAR-AAASRAPPPDVPADHVAVCVGSGCRRFIVR 60
           M+  + K +KIR IVRLRQML+ WR KAR ++ SR  P DVP+ HVAVCVGSGCRRF+VR
Sbjct: 1   MAGSLVKCSKIRHIVRLRQMLRRWRNKARLSSVSRCVPSDVPSGHVAVCVGSGCRRFVVR 60

Query: 61  ASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKD 120
           AS+LNHPI   LL QAEEE+GFA +GPL +PC+ESVFEE IR I+RS+ + SSR +   D
Sbjct: 61  ASYLNHPIISNLLVQAEEEFGFANQGPLVIPCEESVFEEAIRFISRSDSSRSSRFTCPDD 120

Query: 121 LQRRCDK--DVRKNLEYLGESRPLLYGFAD 148
           LQ +C+    ++  L+ + ESRPLL+G A+
Sbjct: 121 LQ-KCNGGIKIKSKLDLMIESRPLLHGVAE 149

BLAST of CmaCh20G008000 vs. TAIR 10
Match: AT1G75590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-38
Identity = 81/150 (54.00%), Postives = 105/150 (70.00%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKARAAA--SRAPPPDVPADHVAVCVGSGCRRFIV 60
           M+  + K +KIR IVRLRQML+ WR +AR ++  SR  P DVP+ HVAV VGS CRRF+V
Sbjct: 1   MAGGLGKCSKIRHIVRLRQMLRRWRDQARMSSSFSRCVPSDVPSGHVAVYVGSSCRRFVV 60

Query: 61  RASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIK 120
           RA++LNHP+ R LL QAEEE+GF  +GPL +PC+ESVFEE IR I+RS+   S R +   
Sbjct: 61  RATYLNHPVLRNLLVQAEEEFGFVNQGPLVIPCEESVFEESIRFISRSDSTRSRRFTCPD 120

Query: 121 DLQRRCD-KDVRKNLEYLGESRPLLYGFAD 148
           D Q+ C    +R  L+   ESRPLL+G  +
Sbjct: 121 DFQKNCHVVGIRSKLDLWIESRPLLHGVTE 150

BLAST of CmaCh20G008000 vs. TAIR 10
Match: AT5G10990.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 147.1 bits (370), Expect = 1.1e-35
Identity = 78/148 (52.70%), Postives = 103/148 (69.59%), Query Frame = 0

Query: 1   MSSVMAKSNKIRSIVRLRQMLQHWRKKAR-AAASRAPPPDVPADHVAVCVGSGCRRFIVR 60
           M+  + K +KIR IV+LRQML+ WR KAR ++  R+ P DVP+ HVAV VG  CRRF+V 
Sbjct: 1   MAGGIGKCSKIRHIVKLRQMLRQWRNKARMSSVRRSVPSDVPSGHVAVYVGRSCRRFVVL 60

Query: 61  ASFLNHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSSRSSSIKD 120
           A++LNHPI   LL +AEEE+GFA +GPL +PC+ESVFEE IR I R     SSR +   D
Sbjct: 61  ATYLNHPILMNLLVKAEEEFGFANQGPLVIPCEESVFEESIRFITR-----SSRFTCTDD 120

Query: 121 LQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           L++     +R  L+ L ESRPLL+G ++
Sbjct: 121 LKKNRHGGIRSKLDLLMESRPLLHGVSE 143

BLAST of CmaCh20G008000 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 7.1e-35
Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 0

Query: 5   MAKSNKIRSIVRLRQMLQHWRKKARAAASRAPP-PDVPADHVAVCVGSGCRRFIVRASFL 64
           M K+NKI S+VR+RQML+ W+KKA   +S   P  DVP  HVAV VG   RR++VRA  L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSS-----RSSSIK 124
           NHPIFR+LL++AEEEYGFA  GPLA+PCDES+FE++I ++ R E ++SS      +++++
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DLQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           DL+R     + KN     ESRPLL G A+
Sbjct: 121 DLRRCSHVGLAKNNV---ESRPLLPGIAE 146

BLAST of CmaCh20G008000 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 144.4 bits (363), Expect = 7.1e-35
Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 0

Query: 5   MAKSNKIRSIVRLRQMLQHWRKKARAAASRAPP-PDVPADHVAVCVGSGCRRFIVRASFL 64
           M K+NKI S+VR+RQML+ W+KKA   +S   P  DVP  HVAV VG   RR++VRA  L
Sbjct: 1   MGKNNKIGSVVRIRQMLKQWQKKAHIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHL 60

Query: 65  NHPIFRKLLSQAEEEYGFATRGPLALPCDESVFEEVIRVIARSELNNSS-----RSSSIK 124
           NHPIFR+LL++AEEEYGFA  GPLA+PCDES+FE++I ++ R E ++SS      +++++
Sbjct: 61  NHPIFRRLLAEAEEEYGFANVGPLAIPCDESLFEDIIAIVTRCESSSSSGRGNPPAATLE 120

Query: 125 DLQRRCDKDVRKNLEYLGESRPLLYGFAD 148
           DL+R     + KN     ESRPLL G A+
Sbjct: 121 DLRRCSHVGLAKNNV---ESRPLLPGIAE 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
O656952.4e-1138.10Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana OX=3702 GN=SAUR50 PE=1 S... [more]
Q9SA493.1e-1137.76Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 S... [more]
O645382.0e-1039.08Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 S... [more]
Q9SGU23.5e-1047.54Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 S... [more]
Q9LTV37.7e-1042.65Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A6J1JBR03.8e-76100.00auxin-responsive protein SAUR50-like OS=Cucurbita maxima OX=3661 GN=LOC111484316... [more]
A0A6J1FXH86.4e-7699.32auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC1114484... [more]
A0A0A0LM487.6e-6180.54Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G257100 PE=3 SV=1[more]
A0A5A7TQK81.0e-6079.87Auxin-responsive protein SAUR64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3C5H31.0e-6079.87auxin-responsive protein SAUR64 OS=Cucumis melo OX=3656 GN=LOC103497270 PE=3 SV=... [more]
Match NameE-valueIdentityDescription
XP_022986631.17.8e-76100.00auxin-responsive protein SAUR50-like [Cucurbita maxima][more]
XP_022943918.11.3e-7599.32auxin-responsive protein SAUR50-like [Cucurbita moschata] >KAG6571069.1 Auxin-re... [more]
XP_023512602.11.9e-7498.65auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo][more]
XP_038902037.11.8e-6485.91auxin-responsive protein SAUR71-like [Benincasa hispida][more]
XP_004147056.11.6e-6080.54auxin-induced protein X10A [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT1G19840.12.7e-4258.67SAUR-like auxin-responsive protein family [more]
AT1G75590.11.8e-3854.00SAUR-like auxin-responsive protein family [more]
AT5G10990.11.1e-3552.70SAUR-like auxin-responsive protein family [more]
AT4G34750.17.1e-3552.35SAUR-like auxin-responsive protein family [more]
AT4G34750.27.1e-3552.35SAUR-like auxin-responsive protein family [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003676Small auxin-up RNAPFAMPF02519Auxin_induciblecoord: 16..102
e-value: 1.9E-27
score: 95.2
NoneNo IPR availablePANTHERPTHR31374AUXIN-INDUCED PROTEIN-LIKE-RELATEDcoord: 6..144
NoneNo IPR availablePANTHERPTHR31374:SF183SMALL AUXIN-UP RNA-RELATEDcoord: 6..144

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh20G008000.1CmaCh20G008000.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009733 response to auxin