CmaCh20G007000 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATCTCAACTAAAATGAAGGTACGTGTTCTGTTCGGTTGAAAACACTAATGTTATCGATAAGTTGACTGTTTTTATCTCGAGTTTTGACGTTTGTTTTTGCAGCAAAAGATAGTAATTCGAGTGTCGATGAAGAGGGGGTCTAAGTACCGTAGCCAAGCCTTGAAAATTGCAGCATCTGTTTCGGGTAAGTTATGCGTATATATAATACAATTTATTTGGATTTCAATGAGTTTAAAGGAATCTGATTGAAGAATGATGCAAATTGCAGGGGATATTGAGACAATTAGCTTGGTAGGTGACGACAAGGATAAAATAGAGGTGGTTGGAGATCTTGACCCAATCGAACTCATTAAGATGCTGAGAAAGAAATTCGGTTGTGCTCAGTTGGAGTCGGTGAGTGTGGTTGAAGTAAAAAATGAAGACAAAAACAAGGACAAGGACAAAGACAAGAATGAAAATGAACCTCAAATAACTTGGATGTGCTCATCCGGGGTGCCTCATCAAACTCCTTATTGCTATTGCTACCATGGTCCCTACCCTTCCTATTCCATATGGTAATTCAAAGTGATAGTGATTC CAATCTCAACTAAAATGAAGCAAAAGATAGTAATTCGAGTGTCGATGAAGAGGGGGTCTAAGTACCGTAGCCAAGCCTTGAAAATTGCAGCATCTGTTTCGGGGGATATTGAGACAATTAGCTTGGTAGGTGACGACAAGGATAAAATAGAGGTGGTTGGAGATCTTGACCCAATCGAACTCATTAAGATGCTGAGAAAGAAATTCGGTTGTGCTCAGTTGGAGTCGGTGAGTGTGGTTGAAGTAAAAAATGAAGACAAAAACAAGGACAAGGACAAAGACAAGAATGAAAATGAACCTCAAATAACTTGGATGTGCTCATCCGGGGTGCCTCATCAAACTCCTTATTGCTATTGCTACCATGGTCCCTACCCTTCCTATTCCATATGGTAATTCAAAGTGATAGTGATTC ATGAAGCAAAAGATAGTAATTCGAGTGTCGATGAAGAGGGGGTCTAAGTACCGTAGCCAAGCCTTGAAAATTGCAGCATCTGTTTCGGGGGATATTGAGACAATTAGCTTGGTAGGTGACGACAAGGATAAAATAGAGGTGGTTGGAGATCTTGACCCAATCGAACTCATTAAGATGCTGAGAAAGAAATTCGGTTGTGCTCAGTTGGAGTCGGTGAGTGTGGTTGAAGTAAAAAATGAAGACAAAAACAAGGACAAGGACAAAGACAAGAATGAAAATGAACCTCAAATAACTTGGATGTGCTCATCCGGGGTGCCTCATCAAACTCCTTATTGCTATTGCTACCATGGTCCCTACCCTTCCTATTCCATATGGTAA MKQKIVIRVSMKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKMLRKKFGCAQLESVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYHGPYPSYSIW Homology
BLAST of CmaCh20G007000 vs. ExPASy Swiss-Prot
Match: F7J0N2 (Disease resistance protein RGA5 OS=Oryza sativa subsp. japonica OX=39947 GN=RGA5 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 4.7e-08 Identity = 33/76 (43.42%), Postives = 56/76 (73.68%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy Swiss-Prot
Match: Q5PNZ7 (Heavy metal-associated isoprenylated plant protein 46 OS=Arabidopsis thaliana OX=3702 GN=HIPP46 PE=2 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 4.4e-06 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy Swiss-Prot
Match: F2VYU4 (Disease resistance protein Pik-1 OS=Oryza sativa subsp. japonica OX=39947 GN=PIK-1 PE=1 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 3.7e-05 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy Swiss-Prot
Match: B5UBC1 (Disease resistance protein Pikm1-TS OS=Oryza sativa subsp. japonica OX=39947 GN=PIKM1-TS PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.8e-04 Identity = 30/75 (40.00%), Postives = 47/75 (62.67%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.1e-63 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1) HSP 1 Score: 213.8 bits (543), Expect = 4.2e-52 Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy TrEMBL
Match: A0A6J1FX50 (uncharacterized protein LOC111449070 OS=Cucurbita moschata OX=3662 GN=LOC111449070 PE=4 SV=1) HSP 1 Score: 182.6 bits (462), Expect = 1.0e-42 Identity = 93/125 (74.40%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 6.3e-40 Identity = 93/125 (74.40%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of CmaCh20G007000 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 3.8e-37 Identity = 91/126 (72.22%), Postives = 99/126 (78.57%), Query Frame = 0
BLAST of CmaCh20G007000 vs. NCBI nr
Match: XP_022987042.1 (uncharacterized protein LOC111484603 [Cucurbita maxima]) HSP 1 Score: 250.8 bits (639), Expect = 6.4e-63 Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0
BLAST of CmaCh20G007000 vs. NCBI nr
Match: XP_022944683.1 (uncharacterized protein LOC111449069 [Cucurbita moschata]) HSP 1 Score: 213.8 bits (543), Expect = 8.6e-52 Identity = 109/125 (87.20%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CmaCh20G007000 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.8 bits (538), Expect = 3.3e-51 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of CmaCh20G007000 vs. NCBI nr
Match: KAG7010799.1 (Heavy metal-associated isoprenylated plant protein 16, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 183.3 bits (464), Expect = 1.3e-42 Identity = 91/125 (72.80%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of CmaCh20G007000 vs. NCBI nr
Match: XP_022944684.1 (uncharacterized protein LOC111449070 [Cucurbita moschata]) HSP 1 Score: 182.6 bits (462), Expect = 2.1e-42 Identity = 93/125 (74.40%), Postives = 109/125 (87.20%), Query Frame = 0
BLAST of CmaCh20G007000 vs. TAIR 10
Match: AT5G48290.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 52.4 bits (124), Expect = 3.1e-07 Identity = 39/89 (43.82%), Postives = 57/89 (64.04%), Query Frame = 0
BLAST of CmaCh20G007000 vs. TAIR 10
Match: AT5G48290.2 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 42.4 bits (98), Expect = 3.2e-04 Identity = 30/74 (40.54%), Postives = 46/74 (62.16%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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