CmaCh20G000390 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh20G000390
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	splicing factor 1-like isoform X1
Location	Cma_Chr20: 167198 .. 172587 (+)
RNA-Seq Expression	CmaCh20G000390
Synteny	CmaCh20G000390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGACACCGTGTTCCGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTCCAGCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTAATTTCATCTCTTTCGCATGGCTTTCGTTTCGTTGTTGAGATGATTTTGGGTATGCAAAGCAAAATGGAGTTTACTGTTAACTCCATTCTACACAGTGCAACTCCAAAATAAGCAACAAAGTTGTATTTTGCACCAGCATTTCTTGTTAAGCTATGTAATTCCATTGGGAGCAAGAAAATTTGAAGCAATTTCTAATTTCTAATTTCGTTGTCTTTGAGACCAGCAGCTAAGATTTGCAATCTGAGAGGTGGAGGTGTTTTCTTGTAAATATAACATTTGCTAACTTCATGAATCACGATCAGAAAGATTATGGCGTTCTAGAGAAATGTCTCAAATGTGATTATAATTTTATTTGTGCTATGTGTACAAGAACAGTCTTTTGCTGTTAATCAAAGCACAGTTGAGTGTTGTTCCAGTCTTGTTAACGTGTTCTAGTTAGACAAAAGAGTTTGAGATCATGTTTCATGTAATAGCCAAGTCATTGTCTTTTTAATATCCGTGAATGTTGGATATTGCTATATAGAATTTGGTTCCAAGAGGTCCCTTTTACTGACCGATTGTCAAATGAATAGAACATTTCTTCTGTAAAGAATTGTGGTTAAGTTACCTCAGTTAATTAAAAACTTACCCATGAACTGATATCCCCTTGCAGAAGAAATGTTTTCTTTGGGTCTGTTTCACATTTTCGCCATGTCTGATCTTTCCATGAACTGATATCCCCTTGCTATTTACCACATGTCATTCTATGAACTGTTATAAAATATTATTATACACAGGGTCATACAAATTTCTTGTTCATTTGATCTATGTTGTTCGGGAATTCTTTACACAAAAGAGTGTAAATGAAAATTTCAAGGTTATATTTACCAGTTGATTTCTCATATATGTTTTATATCATATGTTCTTAAGGTGATTGGAGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGTAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAGGGGGAGGCTCATAGCTTATCAGGTATTTGTGGATTTCTACTCTTTGTCTTCACCCCGCCGCACTTTTTCGTGTATCATTGGCATGTGTTGAAGTCATATTTCATAATCAATAGAAAACGTGTATTTCCCCCCTTCATCTTGTTTATTCTGTGAGCTTTTGAAGTGCAACGCATCACTGTCAATATGGGGGTTGGTTTATTTGATGTATTATCTGGGATAATTTCCTGCTCAGTCTTCTGTGTGACTGTTTCGCATGGAAGATTCCCATTCCAAGTGCTACTTAGTGACATAACTGCCTCTATGGTTATACATATTTTGAGCAGACTCGATTGGAACAAATCAGGGAACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAAGGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGGCAAGTTCAGAGCTCCTATTATCTCCTATGGAACTGTTGTTTTTTTTTTGGATAATGGAACTGTTGTTTTAAGAAAATAAGAACTAATAAATGTATAACTGTCATTATTTTTGTATGATTTTGATGTATGCCTTCTTCAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTATACTTAGTTAGCGACTTGTTTTTATTATGTCCTCGAATTGAATTCTTGATGTTATCTGTAGAAATTTTATTGCTGATACAGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTAAGATTGGTCTTGGATTACTTTTCTTCTGTGGTTAGTGAATATATTAACCTTTTATTTTATTCACTCTGTTCCTCAAGGAAACTAGAAACATACGAACTTAATCATGCTGTCACTCAAAGATAACCATGTTTTATGTCTCGATCATAACTTTTCCTATTTCACATAGGATGAGACTTGGAATGATTTTTTTTTTTTTTTTTTTTTTTTTTTGAAGGAAAAAGAAAATTTTCGTTGNTTTTTTTTTTTTTTTTTTTTTTCTTTGAAGGAAAAAGAAAATTTTCGTTGATGAAATGGAAAATTACAAGAAAGTAGCAGGAAGGGTATCTAATTATAGCACTGTATTTCTCGTTTTCACAAGTCAATCATGATCTTTTAATGCCCCCTACTACATGAGGGTCATTCACTTCATATATAAAATCCCATCATGCTAGGAAATATTTTCCTTCGCCAAATGGAATCTATATATTGCGAATTTAGTGAACTTATTTCATGTTAAAGTTAAGAATTCTACCTTCTGAGGAGGTGCAGAAGTAACGGAGAGATCTCATACTCATCTTCTCTAATGTGATGTTTAAAATGCTCCAGTGCATTGGAGTTTTTTGCTCATTCGTTCTGAGTTCCCTCCGTTTATGTAGTTTTTGTAGACCAGTTTAAGCTATTGTTTCCCTGATCATATGGAATTTACCTCGTAGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGTAAAAAAGATCATTTTAGATTATGAGATGTTGTACTGAAGATTATCTCTGTTTCATAAACTTTTAATAGATATTTCCTTCACTAAATATGTCAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGTGAACCCTTATATCATGAAAGTCAAAAATATTTTTCTGATGAAATGAAAGTCATAGTATGTCCTATACTGCAAAGTAAAGCCAAAGGACCATATTTTTAGAATCTGGGGAAATGACAATATTTTTACTCTTTTTGCTTCCCCCACCTTCCCTTATTCTTACAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGTTAGTCATTTGCTTCAAGAAAAAAAACAGATCTCCACGGTTTTCATCTATTTTAGACAATGTTTTCTCATTATTTATAACTCATTGCCTTCGTCTCATAGGGAAATCTGGCCACTGGCTCCACATTGTCCGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCATCAACTCCGATGCAAGGCCAGTTTCGTTATTCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTAAACAGGAATTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCTTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCGTCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCACCTGGAAATGCAGCAGTAGCCAATGTGGATGGATATGCGTCTTATACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATAACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTTCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAGCACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCACCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCAGCTACAATTCCTGCTTTTCTCGATCAAGGTCCTCGAACACAACTGCAACAAAGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCAAACTTGCCAGGGAATTTTACTCACAGACCCGGGAACGCCATGCAACTTGAACAATGTTTCCCCATGCGACCTCCTCGGCCTGAAGTCCGCTTTACTCCCCCACAGTACAGTAGCAATCTGACGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTTTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTCTGAGTTTGTCAAGTGCTGCACTTTTACGACAGAGGGAAAAGCTCAGATAGCCTGCTAAGGTCCGAATGGGCACTCTTTGTCGATATATAGAAGTTGACTTCTGTATTCATGTTTCGCTAAAAAATATGATATATTTCTTGGAATGGATGTCTATTGATGCTTTGCTGGTGAATGATAGTCGTACCCTTTCACTGGATCCTATGAGGGGCGGGGTTCGATTTTGACAATTTCCTTAGGTCATCTTTAAGGCCTCCAGTTTCATCCATTATACGATGGTAGTCCAAGAGAAGCTTTTTATGCCGTGTATGATAGTGAATTCCGGCAGTTTCTCCAAGATTGGAACTTTTTTTATAAATGTATAGTGAAAACCATTTATTCGGGCGACTTTAACT

mRNA sequence

GGGAGACACCGTGTTCCGTCTGAAGCCATTCCCAGAGAACTTGGTTATGTGCGGCAATTCTCCAGCGTGCGTTCAGTTCTGAAGAAGATAGTGGTTCAGGTGATTGGAGAAGAATATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGTAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAGGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCAGGGAACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAAGGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCCGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCATCAACTCCGATGCAAGGCCAGTTTCGTTATTCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTAAACAGGAATTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCTTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCGTCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCACCTGGAAATGCAGCAGTAGCCAATGTGGATGGATATGCGTCTTATACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATAACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTTCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAGCACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCACCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCAGCTACAATTCCTGCTTTTCTCGATCAAGGTCCTCGAACACAACTGCAACAAAGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCAAACTTGCCAGGGAATTTTACTCACAGACCCGGGAACGCCATGCAACTTGAACAATGTTTCCCCATGCGACCTCCTCGGCCTGAAGTCCGCTTTACTCCCCCACAGTACAGTAGCAATCTGACGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTTTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGAAAACTGCTGAAGTGCATTGGGTGTTTGTAGTTCTGAGTTTGTCAAGTGCTGCACTTTTACGACAGAGGGAAAAGCTCAGATAGCCTGCTAAGGTCCGAATGGGCACTCTTTGTCGATATATAGAAGTTGACTTCTGTATTCATGTTTCGCTAAAAAATATGATATATTTCTTGGAATGGATGTCTATTGATGCTTTGCTGGTGAATGATAGTCGTACCCTTTCACTGGATCCTATGAGGGGCGGGGTTCGATTTTGACAATTTCCTTAGGTCATCTTTAAGGCCTCCAGTTTCATCCATTATACGATGGTAGTCCAAGAGAAGCTTTTTATGCCGTGTATGATAGTGAATTCCGGCAGTTTCTCCAAGATTGGAACTTTTTTTATAAATGTATAGTGAAAACCATTTATTCGGGCGACTTTAACT

Coding sequence (CDS)

ATGAGTGCAGAGGTTGAAAAGGCATCTTGTATCGAGTCTAGTAGTGCAAAGATGTCTGGAGCAACTGTTACTTCTGCTGCACCTATGGGAAGCCAAAAGGTTTCCATGTTTGCAGCAAAGACTGGGTTTGTTATACCAAAAAACAAACTTTCAGGGTCTTTGGTTCCCATCTTCCGAGTGAACAAAAAGTTGGGAGGGAATGAATCCGCTAATGGAGAAAATGTGAAACAGACCCAAAGAAATACAAAGTGGGGTCCTGATTTAACACAGGATACTGCTGTCAGAAGGGGGAGGCTCATAGCTTATCAGACTCGATTGGAACAAATCAGGGAACTCCTTAAATCTGGAACTTTGGAGGTTCCAAAGACACAAGTTTCTGAAGCTGAGAAGGTGGATGATAATTCCCCTGGACCTCAAGGGAATAATAAGAATATACAGGCGCTGAACAATGAACTTTTGGAACTTGAAAAACGTGAAGTTATTGGTGAAATACTAAAACTGAATCCAAGTTATAAGGCCCCTCCTGATTATAGGCCCTTGTTGAAAGAGGACAGCTTACCTCTCCCGGTTAAAGAATATCCTGGTTACAACTTTATTGGCTTAATATATGGCCCCAGTGGTGAAAATCAAAAGCGATTAGAAAAGGAGACTGGAGCCAAAATACGAATTTGCGGTATTAAAGCAGGGACAGGTGAAAAGGACGAAATTAAACCAACTGATGTACACGAAACTCAGAACGCTTATGAAGAGCTGTACGTTTGCATGTCAGCTGATACATTTGATAAGATTGATGCTGCAATTTCTGTTATTGAACTCCTAATCACCTCAATATCGGGAAATCTGGCCACTGGCTCCACATTGTCCGACTTGGTTTCTACGGAGGAAAGTTCTTCCAGCCGAGCCGAGGGTACTACAGTCTCAAATATGGGGCAGACTCCTGTGCCGAACCAGGGGGTTATGCATCAACTACAAGTTTATGCATCAACTCCGATGCAAGGCCAGTTTCGTTATTCTAGTGCATGGCCTTCTCACAATTTACCGCCTGCTCCTGCATTTATTTCCCCACAAGATCCTCCGTCATCATTTTCTCGTCCACCTGCTCCAGTTGCTTTCAATCCAGCTTTCCGGGGCCCTCCTGTTCCTCCTCCAAGACAGCAGTTTCCTAAACAGGAATTGCAGCAACCTTTCATGACTCAAACCAGTCACGTTGGCCAACCCAGAGTAAATGCTTTGACAATTCAACGCCCCTCATTGGTTCCTTCTAATGTCTCAAATCCAAACTTCACTGGTAGTGGTCAATTACCTTCAGGACCACTCCCGAATATGCCAGGATCATCAATTCCCTCAGCTTTGCCTCAACTTGTTCTTGGTAGCATTCCTCCTGGACCACGGCCTGACCGTCCATTAGCACCTAGCATAGTTTCTACTGGTTTTTCTGGTCCCGCAGTTGGCAGCTCAGCGTCTATGGGTCCAAATAACATGGGGCAGATGGCTCTATCGATTGCCCCACCCTTTCTGCCTCGTGCAGCTCCACCGCAGGGTGTTAATTCTTCTGGCACAGCACCTGGAAATGCAGCAGTAGCCAATGTGGATGGATATGCGTCTTATACTTCTGGGCCGCCCACCCCCCAAGCCATGAGTATACATAAAAATCACCCTATAACACCTCCAATTCCGTCACCCCAGATGGGGCATCGCCCACCATTTGCAGCACATAATCCTGCTGGTAACTTCATTTCTGGATCTGCTTCAACCCCTCCTACACCACCTACCAATACCAGCAATTTTACATTCCAACCACGTGGTCCACAAAATCCATCTCCTCAAACAATTCTGAATTTAAACATTCAAAGCACACCTACCGTACCTACATTGCAACAGCCTGCATCTGGGGCACCATCTTTCCATCCAGCAGCCCCAAATTTTGTGAGAGCTGCCAATCAACCCTTTCCCGGACCCCAAGCTGGCAGCCAGATAGGTAATCGTCAAATTCAAGAGGTAGCTTCAAATCCTATTGGCATGCAGGTCTCAGCTACAATTCCTGCTTTTCTCGATCAAGGTCCTCGAACACAACTGCAACAAAGAAACTTTAGTCCAGCCATGCAAATGCAAATGCAAATGCCAAACTTGCCAGGGAATTTTACTCACAGACCCGGGAACGCCATGCAACTTGAACAATGTTTCCCCATGCGACCTCCTCGGCCTGAAGTCCGCTTTACTCCCCCACAGTACAGTAGCAATCTGACGTTTGTTTCTGGTAGGCCACCTCCCATTTCCGGTGGGCAGCAAGTTTATGATCCATTTTCGCCTACATCTGTAGCTGGCACACAACAGCAGGGGAGCAATCCGCCAAGGTGA

Protein sequence

MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRVNKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGNAMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR

Homology

[Close]

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot
Match: Q54BM5 (Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.0e-17
Identity = 74/219 (33.79%), Postives = 115/219 (52.51%), Query Frame = 0


Query: 105 RLEQIRELLKSGTLEVPKTQVSEAEKVDDNSPGPQGNNKNIQALN-----NELLELEKRE 164
           R+++I + +  G +E      +E ++    SP P  +N   ++        E L+ E+ +
Sbjct: 100 RVDEITKKITIGPIE-----FTERDRERSPSPPPTYDNNGKRSNTREQRIKEKLQKERHQ 159

Query: 165 VIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKET 224
           ++    ++NP+YK P DY+P    K   + +P+K +P YNFIGLI GP G  QKR+EKE+
Sbjct: 160 LVVTAQQINPTYKPPSDYQPPNEKKTRKIYIPIKNHPEYNFIGLIIGPRGNTQKRMEKES 219

Query: 225 GAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKID-AAISVIELLITS 284
           GAKI I     G G   + KPT +   +N  +EL+V ++ADT D++D A + V E LI  
Sbjct: 220 GAKIAI----RGKGSSRDGKPTKLQFQEN--DELHVLLTADTVDQLDKAEVLVREFLIPV 279

Query: 285 ISG-NLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPV 315
             G N      L +L   E + + R     + N   TPV
Sbjct: 280 EEGKNEHKRQQLREL--AEMNGTLRERPAYMGNRSWTPV 305

[Close]

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot
Match: Q64213 (Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6)

HSP 1 Score: 66.2 bits (160), Expect = 1.8e-09
Identity = 134/586 (22.87%), Postives = 219/586 (37.37%), Query Frame = 0


Query: 86  PDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEVPKTQVSEAEKVDD--NSPGPQGNNK 145
           P LT++    + R    Q ++E +   L++G L +P      +   +   NS G + N +
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTR 101

Query: 146 NIQALNNELLELEKREVIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGYNFIGL 205
             +    + LE E+  +I E++ LNP +K P DY+P      D + +P  EYP  NF+GL
Sbjct: 102 EFR--TRKKLEEERHTLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGL 161

Query: 206 IYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFD 265
           + GP G   K +EKE  AKI I G   G+ ++ ++   D        E L+  ++A+T +
Sbjct: 162 LIGPRGNTLKNIEKECNAKIMIRG--KGSVKEGKVGRKDGQMLPGEDEPLHALVTANTME 221

Query: 266 KIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMH 325
            +  A+  I  ++      + T    +DL   +    +R  GT   +       +  ++ 
Sbjct: 222 NVKKAVEQIRNILKQ---GIETPEDQNDLRKMQLRELARLNGTLRED-------DNRILR 281

Query: 326 QLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPSSFSRPPAPVAFNPAFRGPPVP 385
             Q   +  +      +    + ++     F  P DP S+                    
Sbjct: 282 PWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQD------------------ 341

Query: 386 PPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPN 445
                  K  + + +++  + +G+           + VP++V + +   +  L S P P 
Sbjct: 342 -------KARMDKEYLSLMAELGE-----------APVPASVGSTSGPATTPLASAPRPA 401

Query: 446 MPGSSIPSALPQLVLGSIPP----GPRPDRPL---------APSIVSTGFSGPAVGSSAS 505
            P S+ P         S PP    GP  +RP           P      F  P    +  
Sbjct: 402 APASNPPPPSLMSTTQSRPPWMNSGPSENRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGG 461

Query: 506 MGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYT---SG------ 565
            G + M        PP++    PP  +N     PG+     +D Y   T   SG      
Sbjct: 462 HGGHPMQHNPNGPPPPWM--QPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQ 521

Query: 566 -----PPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTS 625
                PP P  M         PP P P  G  PP     P   +       PP PP ++S
Sbjct: 522 GKGMMPPPPMGM--------MPPPPPPPSGQPPP-PPSGPLPPWQQQQQQPPPPPPPSSS 558

Query: 626 NFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAP 641
             +  P   Q  +  T  +    S P  P  QQ A+ A S  P  P
Sbjct: 582 MASSTPLPWQQNTTTTTTSAGTGSIP--PWQQQQAAAAAS--PGTP 558

[Close]

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot
Match: Q9LU44 (Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 1.2e-08
Identity = 153/638 (23.98%), Postives = 239/638 (37.46%), Query Frame = 0


Query: 101 AYQTRLEQIRELLKSGTL--EVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKR 160
           A  +RL +I  +L+SG    + P+ Q S + +   ++ G + N +  +A   E L  E++
Sbjct: 160 ALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQ 219

Query: 161 EVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETG 220
           E+I +I+K NP++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETG
Sbjct: 220 EIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETG 279

Query: 221 AKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSIS 280
           AKI I G K    E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  + 
Sbjct: 280 AKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPVD 339

Query: 281 --------GNLATGSTLSDLVSTEESSSSRAE--GTTVSNMGQTPVPNQGVMHQLQVYAS 340
                     L   +TL+  +  EE      E      +   +T      V+ ++     
Sbjct: 340 EVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLCKICGDGG 399

Query: 341 TP-------------MQGQFRYSSAWPSHNLPPAPAFISPQ---DPPSSFSRPP------ 400
            P             M  +++   A     +P +    S      P SS S PP      
Sbjct: 400 HPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNPPWANNAG 459

Query: 401 APVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNP 460
              + +P     P  PP +++ +  L   F+     +    +  L      +V + V   
Sbjct: 460 NGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPM--LEDDGLINLFSSFGEIVMAKVIKD 519

Query: 461 NFTGSG-----------QLPSGPLPNMPGSSIPS-ALPQLVLGSIPPGPRPDRPLAPSIV 520
             TG             Q+ +  +  M G       L   + G  PP   P  P AP   
Sbjct: 520 RVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPP 579

Query: 521 STGF--SGPAVGSSASMGPNNMGQMALSI-----APPFLPRAAPPQGVNSSGTAPGNAAV 580
           + G+  S    G+  S      G     +      P + P A PP    S     G    
Sbjct: 580 TQGYPPSNQPPGAYPSQQYATGGYSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQ--- 639

Query: 581 ANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHN-------PAGNFIS 640
            ++  Y      PP     +        P    PQ    P   A +       P   + S
Sbjct: 640 -HMPPYGMQYPPPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGS 699

Query: 641 GSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAP 672
              + P  PP  +    +    P  P        + Q+   +P    P+   P       
Sbjct: 700 SVTAMPGQPPYMSYPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLV 759

[Close]

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot
Match: Q15637 (Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4)

HSP 1 Score: 58.5 bits (140), Expect = 3.8e-07
Identity = 129/562 (22.95%), Postives = 208/562 (37.01%), Query Frame = 0


Query: 86  PDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEVPKTQVSEAEKVDD--NSPGPQGNNK 145
           P LT++    + R    Q ++E +   L++G L +P      +   +   NS G + N +
Sbjct: 42  PGLTRE----QERAYIVQLQIEDLTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTR 101

Query: 146 NIQALNNELLELEKREVIGEILKLNPSYKAPPDYRP--LLKEDSLPLPVKEYPGYNFIGL 205
             +    + LE E+  +I E++ LNP +K P DY+P      D + +P  EYP  NF+GL
Sbjct: 102 EFR--TRKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGL 161

Query: 206 IYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFD 265
           + GP G   K +EKE  AKI I G   G+ ++ ++   D        E L+  ++A+T +
Sbjct: 162 LIGPRGNTLKNIEKECNAKIMIRG--KGSVKEGKVGRKDGQMLPGEDEPLHALVTANTME 221

Query: 266 KIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMH 325
            +  A+  I  ++      + T    +DL   +    +R  GT   +       +  ++ 
Sbjct: 222 NVKKAVEQIRNILKQ---GIETPEDQNDLRKMQLRELARLNGTLRED-------DNRILR 281

Query: 326 QLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPSSFSRPPAP---VAFNPAFRGP 385
             Q   +  +      +    + ++     F  P DP S+  +       ++        
Sbjct: 282 PWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEA 341

Query: 386 PVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGP 445
           PVP             P  T  +   +P   A     PSL+ +  S P +  SG   S P
Sbjct: 342 PVPA-----SVGSTSGPATTPLASAPRPAAPANNPPPPSLMSTTQSRPPWMNSGPSESRP 401

Query: 446 LPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMA 505
              M G            G   PG  P     P    TG  G   G      PN      
Sbjct: 402 YHGMHGG-----------GPGGPGGGPHSFPHPLPSLTGGHG---GHPMQHNPNGPPPPW 461

Query: 506 LSIAPPFLPRAAPPQGVNSS-------GTAPGNAAVANVDGYASYTSGPPTPQAMSIHKN 565
           +   PP + +   P G +         G+ P  + V  +  +      PP P  M     
Sbjct: 462 MQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRL--HQGKGMMPPPPMGM----- 521

Query: 566 HPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQPRGPQNPSPQTI 625
               PP P P  G  PP     P   +       PP PP ++S  +  P   Q  +  T 
Sbjct: 522 ---MPPPPPPPSGQPPP-PPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTT 555

Query: 626 LNLNIQSTPTVPTLQQPASGAP 634
            +    S P     Q  A+ +P
Sbjct: 582 TSAGTGSIPPWQQQQAAAAASP 555

[Close]

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot
Match: O74555 (Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=bpb1 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 3.2e-06
Identity = 120/495 (24.24%), Postives = 201/495 (40.61%), Query Frame = 0


Query: 99  LIAYQTRLEQIRELLKSGTLEVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKR 158
           L +   RLE+I + L++G +     + S +     ++ G + N + I+    + LE E+ 
Sbjct: 104 LYSLNVRLEEITQKLRTGDVVPHHRERSPSPPPQYDNHGRRLNTREIR--YKKKLEDERH 163

Query: 159 EVIGEILKLNPSYKAPPDY-RPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKET 218
            +I   +K+ P ++AP DY RP   ++ + +PVK+YP  NFIGL+ GP G   K +E ++
Sbjct: 164 RIIERAMKMVPGFRAPSDYRRPAKTQEKVYVPVKDYPEINFIGLLIGPRGHTLKDMEAKS 223

Query: 219 GAKIRICG---IKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLI 278
           GAKI I G   +K G G       +D     N  E+L+  ++AD+ DKI+ AI +I+ +I
Sbjct: 224 GAKIAIRGKGSVKEGKGR------SDPSVRGNMEEDLHCLVTADSEDKINHAIKLIDNVI 283

Query: 279 TSISGNLATGSTLSDLVSTEESSSSRAEGTTVSNMGQTPVPNQGVMHQ---LQVYASTPM 338
            + + ++  G   +DL   +    +   GT   +  Q       V H+        +  M
Sbjct: 284 QT-AASVPEGQ--NDLKRNQLRQLATLNGTLRDDENQVCQNCGNVGHRRFDCPERINHTM 343

Query: 339 QGQFRYSSAWPSHNLPPAPAFISPQDPPSSFSRPPAPV--------AFNPAFRGPPVPPP 398
               R+  +   H     P  +  Q PP + S                +    G   P  
Sbjct: 344 NIVCRHCGS-IGHIARDCP--VRDQQPPMADSTADREYQSLMQELGGGSAISNGNGEPQK 403

Query: 399 RQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMP 458
             +F +     P   Q  H       + ++   +  P+  + P    S   PS P P   
Sbjct: 404 SIEFSESGAASP---QAGHPPPWAAASTSVSSSTSSPAPWAKP---ASSAAPSNPAP-WQ 463

Query: 459 GSSIPSALPQLVL--GSIPPGPRPDRP-------LAPS------------IVSTGFSGPA 518
             + P + P L +   S+PP  +P +        L PS            +  T F+ P 
Sbjct: 464 QPAAPQSAPALSMNPSSLPPWQQPTQQSAVQPSNLVPSQNAPFIPGTSAPLPPTTFAPPG 523

Query: 519 VGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGPPT 558
           V      G   M  + +S  P   P  A P G+      PG  AV  + G    T+ P  
Sbjct: 524 VPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGM--PAPFPGYPAVPAMPGIPGATAPPGA 575

[Close]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL
Match: A0A6J1JBW8 (splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1525.0 bits (3947), Expect = 0.0e+00
Identity = 785/785 (100.00%), Postives = 785/785 (100.00%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL
Match: A0A6J1J889 (splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE=4 SV=1)

HSP 1 Score: 1514.2 bits (3919), Expect = 0.0e+00
Identity = 782/785 (99.62%), Postives = 782/785 (99.62%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAEKVDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL
Match: A0A6J1FUX8 (splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1470.3 bits (3805), Expect = 0.0e+00
Identity = 758/785 (96.56%), Postives = 766/785 (97.58%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL
Match: A0A6J1FY22 (splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 PE=4 SV=1)

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 755/785 (96.18%), Postives = 763/785 (97.20%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL
Match: A0A6J1DJY7 (branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111021231 PE=4 SV=1)

HSP 1 Score: 1147.1 bits (2966), Expect = 0.0e+00
Identity = 620/815 (76.07%), Postives = 662/815 (81.23%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEK S IE  + KMSGAT++S APMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKTSHIEPGNMKMSGATISSPAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKK GGNES NGEN KQ QR TKWGPDLTQDTAVR+GRLIAYQTRLEQI ELLKSGTLEV
Sbjct: 61  NKKSGGNESVNGENDKQAQRKTKWGPDLTQDTAVRKGRLIAYQTRLEQITELLKSGTLEV 120

Query: 121 PKTQVSE--AEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYR 180
           P+TQ S   AE V+D SPG Q ++KNIQ  N ELLELEKREVIGEILKLNPSYKAPPDYR
Sbjct: 121 PETQDSALGAENVEDKSPGSQASDKNIQVQNTELLELEKREVIGEILKLNPSYKAPPDYR 180

Query: 181 PLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKP 240
           PLLKED  PLPVKEYPGYNFIGLIYGPSGENQKRLEKETG K+RICGIKA TGEKDEIKP
Sbjct: 181 PLLKEDRFPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGVKMRICGIKAETGEKDEIKP 240

Query: 241 TDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSS 300
           TD HETQNAYEELYV MSADTFDKIDAAISVIELLITSISGNL TGST SDLVSTE SSS
Sbjct: 241 TDGHETQNAYEELYVYMSADTFDKIDAAISVIELLITSISGNLTTGSTFSDLVSTEVSSS 300

Query: 301 SRAEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAW----PSHNLPPAPAFIS 360
           S+AEGTT+SN+GQTPVPNQGVM Q+QVYA T +QGQF Y S W    PSHNL PAP FIS
Sbjct: 301 SQAEGTTISNIGQTPVPNQGVMQQVQVYAPTSVQGQFHYPSTWFPAGPSHNLTPAPGFIS 360

Query: 361 PQDP--------------------PSSFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQ 420
           PQ+P                    PSSF+RPP  + FNPAF GPPV PPRQQ P Q+LQQ
Sbjct: 361 PQNPPSVRNNPIHLSTPTSNISNVPSSFARPPTQIPFNPAFHGPPVHPPRQQLPVQDLQQ 420

Query: 421 PFMTQTSHVGQPRVNALTIQRPSLVPSNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQL 480
           PFMTQTSHVGQ RV+ LTIQRP LV SNVSNPNFTGSG LPSG LPNMPGS++PS     
Sbjct: 421 PFMTQTSHVGQSRVHGLTIQRPPLVQSNVSNPNFTGSGPLPSGLLPNMPGSAVPS----- 480

Query: 481 VLGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQG 540
              SIPP   PDRPLAP +VSTGFSGP VG SAS+GPNNMGQ ALS+APP  P  A P G
Sbjct: 481 ---SIPPASLPDRPLAPIMVSTGFSGPTVGGSASVGPNNMGQTALSLAPPLGPHTALPHG 540

Query: 541 VNSSGTAPGNAAVANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPF---AA 600
           VNSSG AP     AN+D Y+S+ SGP  PQA  +H N PI  P+PSPQMGHRPPF   +A
Sbjct: 541 VNSSGAAP-----ANMDVYSSFPSGPSNPQATGVHTNRPIAAPVPSPQMGHRPPFSVPSA 600

Query: 601 HNPAGNFISGSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASG 660
           HNPAGNFI+GSAS  PTPPTNTSNFTFQPRGPQNP  QTILNLNIQ+  TVPTLQ PASG
Sbjct: 601 HNPAGNFIAGSASNLPTPPTNTSNFTFQPRGPQNPPTQTILNLNIQNPSTVPTLQHPASG 660

Query: 661 APSFHPAAPNFVRAANQPFPGPQAGSQIGNRQIQEV-ASNPIGMQVSATIPAFLDQGPRT 720
           APS+HPA PNF R  NQPFPGPQAGSQIGN QIQE+ AS+PIGMQ S  +PAFLD GPRT
Sbjct: 661 APSYHPAGPNFPRVGNQPFPGPQAGSQIGNNQIQEIAASHPIGMQASPRLPAFLDPGPRT 720

Query: 721 QLQQRNFSPAMQMQMQMPNLPGNFTHRPGNAMQLEQCFPMRPPRPEVRFTPPQYSSNLTF 780
            L QRNFSPA    MQMPNLPGNF HRPGN MQLEQ FP+R  RPEVRF PPQ+  NLTF
Sbjct: 721 PLHQRNFSPA----MQMPNLPGNFPHRPGNPMQLEQGFPIRATRPEVRFAPPQFGGNLTF 780

Query: 781 VSGRPPPISGGQQVYDPFSPTSVAGTQQQGSNPPR 786
            SG+PPP SGGQQ+YDPFSPTSV+G QQQG NP +
Sbjct: 781 CSGKPPPSSGGQQIYDPFSPTSVSGAQQQGRNPAK 798

[Close]

BLAST of CmaCh20G000390 vs. NCBI nr
Match: XP_022986681.1 (splicing factor 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1525.0 bits (3947), Expect = 0.0e+00
Identity = 785/785 (100.00%), Postives = 785/785 (100.00%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmaCh20G000390 vs. NCBI nr
Match: XP_022986682.1 (splicing factor 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1514.2 bits (3919), Expect = 0.0e+00
Identity = 782/785 (99.62%), Postives = 782/785 (99.62%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAEKVDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEKVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN
Sbjct: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmaCh20G000390 vs. NCBI nr
Match: KAG7010232.1 (bpb1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1483.4 bits (3839), Expect = 0.0e+00
Identity = 764/785 (97.32%), Postives = 771/785 (98.22%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIRELLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRELLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAEDVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALTIQRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTIQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALS+APPFLPRAAPPQGVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSLAPPFLPRAAPPQGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSPQTILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPQTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL QRNFSPAMQMQMQMPNLPGNFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQRNFSPAMQMQMQMPNLPGNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPPQYSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPQYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmaCh20G000390 vs. NCBI nr
Match: XP_022943634.1 (splicing factor 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1470.3 bits (3805), Expect = 0.0e+00
Identity = 758/785 (96.56%), Postives = 766/785 (97.58%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 785

[Close]

BLAST of CmaCh20G000390 vs. NCBI nr
Match: XP_022943635.1 (splicing factor 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 1459.5 bits (3777), Expect = 0.0e+00
Identity = 755/785 (96.18%), Postives = 763/785 (97.20%), Query Frame = 0


Query: 1   MSAEVEKASCIESSSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60
           MSAEVEKASCIES SAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV
Sbjct: 1   MSAEVEKASCIESRSAKMSGATVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIFRV 60

Query: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEV 120
           NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVR+GRLIAYQTRLEQIR LLKSGTLEV
Sbjct: 61  NKKLGGNESANGENVKQTQRNTKWGPDLTQDTAVRKGRLIAYQTRLEQIRVLLKSGTLEV 120

Query: 121 PKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180
           PKTQVSEAE VDDNSPGPQGNNK   ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL
Sbjct: 121 PKTQVSEAENVDDNSPGPQGNNK---ALNNELLELEKREVIGEILKLNPSYKAPPDYRPL 180

Query: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240
           LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD
Sbjct: 181 LKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTD 240

Query: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300
           VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR
Sbjct: 241 VHETQNAYEELYVCMSADTFDKIDAAISVIELLITSISGNLATGSTLSDLVSTEESSSSR 300

Query: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFISPQDPPS 360
           AEGTTVSNMGQTPVPNQGVMHQLQVYA TPMQGQFRY SAWPSHNLPPAPAFISPQDPPS
Sbjct: 301 AEGTTVSNMGQTPVPNQGVMHQLQVYAPTPMQGQFRYPSAWPSHNLPPAPAFISPQDPPS 360

Query: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVP 420
           SFSRPPAPVAFNPAFRGPPVPPPRQQFP Q+LQQPFMTQTSHVGQPRVNALT+QRPSLVP
Sbjct: 361 SFSRPPAPVAFNPAFRGPPVPPPRQQFPAQDLQQPFMTQTSHVGQPRVNALTVQRPSLVP 420

Query: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVLGSIPPGPRPDRPLAPSIVSTGFSG 480
           SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLV GSIPPGPRPDRPLAPSIVSTGFSG
Sbjct: 421 SNVSNPNFTGSGQLPSGPLPNMPGSSIPSALPQLVPGSIPPGPRPDRPLAPSIVSTGFSG 480

Query: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPQGVNSSGTAPGNAAVANVDGYASYTSGP 540
           PAVGSSASMGPNNMGQMALSIAPPFLPRAAPP GVNSSGTA  NAAVANVDGYAS+TSGP
Sbjct: 481 PAVGSSASMGPNNMGQMALSIAPPFLPRAAPPHGVNSSGTASANAAVANVDGYASFTSGP 540

Query: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHNPAGNFISGSASTPPTPPTNTSNFTFQP 600
           PTPQAMSIHKNHPITPPIPSPQMGHRP FAAHNPAGNFI+GSASTPPTPPTNTSNFTFQP
Sbjct: 541 PTPQAMSIHKNHPITPPIPSPQMGHRPLFAAHNPAGNFIAGSASTPPTPPTNTSNFTFQP 600

Query: 601 RGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAPNFVRAANQPFPGPQAGSQIG 660
           RGPQNPSP TILNLNIQ+TPTVPTLQQPASGAPSFHPAAPNF+RAANQPFPGPQAGSQIG
Sbjct: 601 RGPQNPSPHTILNLNIQNTPTVPTLQQPASGAPSFHPAAPNFMRAANQPFPGPQAGSQIG 660

Query: 661 NRQIQEVASNPIGMQVSATIPAFLDQGPRTQLQQRNFSPAMQMQMQMPNLPGNFTHRPGN 720
           N QIQEVASNPIGMQVSA IPAFLDQGPRTQL Q NFSPAMQMQMQMPNLP NFTHRPGN
Sbjct: 661 NHQIQEVASNPIGMQVSARIPAFLDQGPRTQLHQGNFSPAMQMQMQMPNLPRNFTHRPGN 720

Query: 721 AMQLEQCFPMRPPRPEVRFTPPQYSSNLTFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780
           AMQLEQCFPMR PRPEVRFTPP+YSSNL FVSGRPPPISGGQQVYDPFSPTSVAGTQQQG
Sbjct: 721 AMQLEQCFPMRAPRPEVRFTPPRYSSNLAFVSGRPPPISGGQQVYDPFSPTSVAGTQQQG 780

Query: 781 SNPPR 786
           SNPPR
Sbjct: 781 SNPPR 782

[Close]

BLAST of CmaCh20G000390 vs. TAIR 10
Match: AT3G32940.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 222.6 bits (566), Expect = 1.1e-57
Identity = 220/639 (34.43%), Postives = 308/639 (48.20%), Query Frame = 0


Query: 22  TVTSAAPMGSQKVSMFAAKTGFVIPKNKLSGSLVPIF-RVNKKLGGNESANGENVK-QTQ 81
           T TSAA     K+SMF AK+GFVIPKNKLSGSL+PIF R NK LG  +S  G   K   +
Sbjct: 2   TSTSAA-----KISMFGAKSGFVIPKNKLSGSLIPIFQRGNKTLGSADSDTGPPSKLGKK 61

Query: 82  RNTKWGPDLTQDTAVRRGRLIAYQTRLEQIRELLKSGTLEVPKTQVSEAEKVDDNSPGPQ 141
           R TKW PDL+QD AV++ R +AYQ R++QI + L+SGTLEV      E  + D       
Sbjct: 62  RKTKWAPDLSQDIAVKKCRFLAYQKRVDQITQRLESGTLEV------ETNRTD------- 121

Query: 142 GNNKNIQALNNELLELEKREVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFI 201
                        LE EKRE IGEIL+LNP YKAPPDY+PLLKE  LP+ VKE+  ++F+
Sbjct: 122 -------------LEFEKREAIGEILELNPRYKAPPDYKPLLKEARLPIDVKEHSDFSFL 181

Query: 202 GLIYGPSGENQKRLEKETGAKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADT 261
            LI+G  G+ QKRLEKETGAK++I G K G GEK E+ P+D +E Q +++ELY  +S+DT
Sbjct: 182 SLIFGSQGDTQKRLEKETGAKVQIFGTKTG-GEKVELSPSDENEIQKSWQELYFQISSDT 241

Query: 262 FDKIDAAISVIELLITSISGNLATG----STLSDLVSTEESSSSRAEGTTVSNMGQTPVP 321
           ++K+DAAI+V+ELL++S+SGN   G    S++S+++ST   +S      T     +T   
Sbjct: 242 YEKVDAAIAVVELLMSSVSGNTGAGAAPPSSISEIISTIPGNSIAT--ATAPTSERTTDH 301

Query: 322 NQGVMHQLQVYASTPMQGQFRYSSAWPSHNLPPAPAFIS-------PQDPPSS------- 381
           +Q + H    + S         S+  P H  PP   F+S        Q+ P +       
Sbjct: 302 SQVLQHGSSFHLS---------SNQAPLH--PPLEHFVSGLGYNIQEQELPKNSMNLNPL 361

Query: 382 FSRPPAPVAFNPAF-RGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQ------ 441
           F++   PV  + +   G  VP P   FP      P   +T  V  P  +   IQ      
Sbjct: 362 FAQQLLPVPHDTSLPPGSHVPRPPDSFPFSLSNTP---RTYSVTLPPYSGSQIQPIGPRS 421

Query: 442 --------------RPSLVPSNVSN-----PNFTGSGQLPSGPLPNMPGSSIPSALPQLV 501
                         RP+L+P    +     PNF+        P+ + PG+ IPS +P   
Sbjct: 422 TVRPSTLFTFHPVHRPTLLPDIDQSVRPLAPNFS------PHPVAHQPGTEIPS-IPFPS 481

Query: 502 LGSIPPGPRPDRPLAPSIVSTGFSGPAVGSSASMGPNNMGQMALSIAPPFLPRAA----- 561
             S+         L P  VS   +    G   +  P N           ++P+ +     
Sbjct: 482 ASSLIAEYGSGSSLRPMSVSPHIASRPAGLVPAYPPTNTASRPFHGDFGYIPQQSNIITT 541

Query: 562 ---PPQGVNSSGTAPGNAAVANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRP 603
               P+  + S   P     A+     ++T      + M    +HP  P   + +    P
Sbjct: 542 PHISPRPNSQSAHLPHLPFQASQHFGQNFTRSQHFDRQMDQPLSHPSAPFHGNARSNVGP 583

[Close]

BLAST of CmaCh20G000390 vs. TAIR 10
Match: AT5G51300.1 (splicing factor-related )

HSP 1 Score: 63.5 bits (153), Expect = 8.5e-10
Identity = 153/638 (23.98%), Postives = 239/638 (37.46%), Query Frame = 0


Query: 101 AYQTRLEQIRELLKSGTL--EVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKR 160
           A  +RL +I  +L+SG    + P+ Q S + +   ++ G + N +  +A   E L  E++
Sbjct: 160 ALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQ 219

Query: 161 EVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETG 220
           E+I +I+K NP++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETG
Sbjct: 220 EIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETG 279

Query: 221 AKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSIS 280
           AKI I G K    E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  + 
Sbjct: 280 AKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPVD 339

Query: 281 --------GNLATGSTLSDLVSTEESSSSRAE--GTTVSNMGQTPVPNQGVMHQLQVYAS 340
                     L   +TL+  +  EE      E      +   +T      V+ ++     
Sbjct: 340 EVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLCKICGDGG 399

Query: 341 TP-------------MQGQFRYSSAWPSHNLPPAPAFISPQ---DPPSSFSRPP------ 400
            P             M  +++   A     +P +    S      P SS S PP      
Sbjct: 400 HPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNPPWANNAG 459

Query: 401 APVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNP 460
              + +P     P  PP +++ +  L   F+     +    +  L      +V + V   
Sbjct: 460 NGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPM--LEDDGLINLFSSFGEIVMAKVIKD 519

Query: 461 NFTGSG-----------QLPSGPLPNMPGSSIPS-ALPQLVLGSIPPGPRPDRPLAPSIV 520
             TG             Q+ +  +  M G       L   + G  PP   P  P AP   
Sbjct: 520 RVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPP 579

Query: 521 STGF--SGPAVGSSASMGPNNMGQMALSI-----APPFLPRAAPPQGVNSSGTAPGNAAV 580
           + G+  S    G+  S      G     +      P + P A PP    S     G    
Sbjct: 580 TQGYPPSNQPPGAYPSQQYATGGYSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQ--- 639

Query: 581 ANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHN-------PAGNFIS 640
            ++  Y      PP     +        P    PQ    P   A +       P   + S
Sbjct: 640 -HMPPYGMQYPPPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGS 699

Query: 641 GSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAP 672
              + P  PP  +    +    P  P        + Q+   +P    P+   P       
Sbjct: 700 SVTAMPGQPPYMSYPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLV 759

[Close]

BLAST of CmaCh20G000390 vs. TAIR 10
Match: AT5G51300.2 (splicing factor-related )

HSP 1 Score: 63.5 bits (153), Expect = 8.5e-10
Identity = 153/638 (23.98%), Postives = 239/638 (37.46%), Query Frame = 0


Query: 101 AYQTRLEQIRELLKSGTL--EVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKR 160
           A  +RL +I  +L+SG    + P+ Q S + +   ++ G + N +  +A   E L  E++
Sbjct: 160 ALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQ 219

Query: 161 EVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETG 220
           E+I +I+K NP++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETG
Sbjct: 220 EIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETG 279

Query: 221 AKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSIS 280
           AKI I G K    E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  + 
Sbjct: 280 AKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPVD 339

Query: 281 --------GNLATGSTLSDLVSTEESSSSRAE--GTTVSNMGQTPVPNQGVMHQLQVYAS 340
                     L   +TL+  +  EE      E      +   +T      V+ ++     
Sbjct: 340 EVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLCKICGDGG 399

Query: 341 TP-------------MQGQFRYSSAWPSHNLPPAPAFISPQ---DPPSSFSRPP------ 400
            P             M  +++   A     +P +    S      P SS S PP      
Sbjct: 400 HPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNPPWANNAG 459

Query: 401 APVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNP 460
              + +P     P  PP +++ +  L   F+     +    +  L      +V + V   
Sbjct: 460 NGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPM--LEDDGLINLFSSFGEIVMAKVIKD 519

Query: 461 NFTGSG-----------QLPSGPLPNMPGSSIPS-ALPQLVLGSIPPGPRPDRPLAPSIV 520
             TG             Q+ +  +  M G       L   + G  PP   P  P AP   
Sbjct: 520 RVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPP 579

Query: 521 STGF--SGPAVGSSASMGPNNMGQMALSI-----APPFLPRAAPPQGVNSSGTAPGNAAV 580
           + G+  S    G+  S      G     +      P + P A PP    S     G    
Sbjct: 580 TQGYPPSNQPPGAYPSQQYATGGYSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQ--- 639

Query: 581 ANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHN-------PAGNFIS 640
            ++  Y      PP     +        P    PQ    P   A +       P   + S
Sbjct: 640 -HMPPYGMQYPPPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGS 699

Query: 641 GSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAP 672
              + P  PP  +    +    P  P        + Q+   +P    P+   P       
Sbjct: 700 SVTAMPGQPPYMSYPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLV 759

[Close]

BLAST of CmaCh20G000390 vs. TAIR 10
Match: AT5G51300.3 (splicing factor-related )

HSP 1 Score: 63.5 bits (153), Expect = 8.5e-10
Identity = 153/638 (23.98%), Postives = 239/638 (37.46%), Query Frame = 0


Query: 101 AYQTRLEQIRELLKSGTL--EVPKTQVSEAEKVDDNSPGPQGNNKNIQALNNELLELEKR 160
           A  +RL +I  +L+SG    + P+ Q S + +   ++ G + N +  +A   E L  E++
Sbjct: 160 ALNSRLLEISRMLQSGMPLDDRPEGQRSPSPEPVYDNMGIRINTREYRA--RERLNRERQ 219

Query: 161 EVIGEILKLNPSYKAPPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETG 220
           E+I +I+K NP++K P DYRP      L +P+KE+PGYNFIGLI GP G  QKR+E+ETG
Sbjct: 220 EIIAQIIKKNPAFKPPADYRPPKLHKKLFIPMKEFPGYNFIGLIIGPRGNTQKRMERETG 279

Query: 221 AKIRICGIKAGTGEKDEIKPTDVHETQNAYEELYVCMSADTFDKIDAAISVIELLITSIS 280
           AKI I G K    E    +  D+    +  E+L+V + A+T + ++AA  ++E L+  + 
Sbjct: 280 AKIVIRG-KGSVKEGRHQQKKDLKYDPSENEDLHVLVEAETQEALEAAAGMVEKLLQPVD 339

Query: 281 --------GNLATGSTLSDLVSTEESSSSRAE--GTTVSNMGQTPVPNQGVMHQLQVYAS 340
                     L   +TL+  +  EE      E      +   +T      V+ ++     
Sbjct: 340 EVLNEHKRQQLRELATLNGTIRDEEFCRLCGEPGHRQYACPSRTNTFKSDVLCKICGDGG 399

Query: 341 TP-------------MQGQFRYSSAWPSHNLPPAPAFISPQ---DPPSSFSRPP------ 400
            P             M  +++   A     +P +    S      P SS S PP      
Sbjct: 400 HPTIDCPVKGTTGKKMDDEYQNFLAELGGTVPESSLKQSATLALGPGSSGSNPPWANNAG 459

Query: 401 APVAFNPAFRGPPVPPPRQQFPKQELQQPFMTQTSHVGQPRVNALTIQRPSLVPSNVSNP 460
              + +P     P  PP +++ +  L   F+     +    +  L      +V + V   
Sbjct: 460 NGASAHPGLGSTPTKPPSKEYDETNLYIGFLPPM--LEDDGLINLFSSFGEIVMAKVIKD 519

Query: 461 NFTGSG-----------QLPSGPLPNMPGSSIPS-ALPQLVLGSIPPGPRPDRPLAPSIV 520
             TG             Q+ +  +  M G       L   + G  PP   P  P AP   
Sbjct: 520 RVTGLSKGYGFVKYADVQMANTAVQAMNGYRFEGRTLAVRIAGKSPPPIAPPGPPAPQPP 579

Query: 521 STGF--SGPAVGSSASMGPNNMGQMALSI-----APPFLPRAAPPQGVNSSGTAPGNAAV 580
           + G+  S    G+  S      G     +      P + P A PP    S     G    
Sbjct: 580 TQGYPPSNQPPGAYPSQQYATGGYSTAPVPWGPPVPSYSPYALPPPPPGSYHPVHGQ--- 639

Query: 581 ANVDGYASYTSGPPTPQAMSIHKNHPITPPIPSPQMGHRPPFAAHN-------PAGNFIS 640
            ++  Y      PP     +        P    PQ    P   A +       P   + S
Sbjct: 640 -HMPPYGMQYPPPPPHVTQAPPPGTTQNPSSSEPQQSFPPGVQADSGAATSSIPPNVYGS 699

Query: 641 GSASTPPTPPTNTSNFTFQPRGPQNPSPQTILNLNIQSTPTVPTLQQPASGAPSFHPAAP 672
              + P  PP  +    +    P  P        + Q+   +P    P+   P       
Sbjct: 700 SVTAMPGQPPYMSYPSYYNAVPPPTPPAPASSTDHSQNMGNMPWANNPSVSTPDHSQGLV 759

[Close]

BLAST of CmaCh20G000390 vs. TAIR 10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein )

HSP 1 Score: 50.8 bits (120), Expect = 5.7e-06
Identity = 31/106 (29.25%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 173 APPDYRPLLKEDSLPLPVKEYPGYNFIGLIYGPSGENQKRLEKETGAKIRICGIKAGTGE 232
           A P   P+ +   L LPV  YP +NF+G + GP G + KR+E  TG ++ I G  +    
Sbjct: 126 ASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIRGKGSIKDP 185

Query: 233 KDEIKPTDVHETQNAYEELYVCMSAD-TFDKIDAAISVIELLITSI 278
           + E K       ++  E+L++ + AD   D +D  +   + +I  +
Sbjct: 186 EKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEEL 231

The following BLAST results are available for this feature:

BLAST of CmaCh20G000390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54BM5	7.0e-17	33.79	Branchpoint-bridging protein OS=Dictyostelium discoideum OX=44689 GN=sf1 PE=3 SV...	[more]
Q64213	1.8e-09	22.87	Splicing factor 1 OS=Mus musculus OX=10090 GN=Sf1 PE=1 SV=6	[more]
Q9LU44	1.2e-08	23.98	Splicing factor-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=SF1 PE=1 SV=1	[more]
Q15637	3.8e-07	22.95	Splicing factor 1 OS=Homo sapiens OX=9606 GN=SF1 PE=1 SV=4	[more]
O74555	3.2e-06	24.24	Branchpoint-bridging protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of CmaCh20G000390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JBW8	0.0e+00	100.00	splicing factor 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1J889	0.0e+00	99.62	splicing factor 1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484361 PE...	[more]
A0A6J1FUX8	0.0e+00	96.56	splicing factor 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1FY22	0.0e+00	96.18	splicing factor 1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448345 ...	[more]
A0A6J1DJY7	0.0e+00	76.07	branchpoint-bridging protein isoform X1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmaCh20G000390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986681.1	0.0e+00	100.00	splicing factor 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022986682.1	0.0e+00	99.62	splicing factor 1-like isoform X2 [Cucurbita maxima]	[more]
KAG7010232.1	0.0e+00	97.32	bpb1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943634.1	0.0e+00	96.56	splicing factor 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022943635.1	0.0e+00	96.18	splicing factor 1-like isoform X2 [Cucurbita moschata]	[more]

BLAST of CmaCh20G000390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G32940.1	1.1e-57	34.43	RNA-binding KH domain-containing protein	[more]
AT5G51300.1	8.5e-10	23.98	splicing factor-related	[more]
AT5G51300.2	8.5e-10	23.98	splicing factor-related	[more]
AT5G51300.3	8.5e-10	23.98	splicing factor-related	[more]
AT3G08620.1	5.7e-06	29.25	RNA-binding KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 197..228 e-value: 1.2E-4 score: 21.8
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 177..302 e-value: 3.9E-23 score: 83.9
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 184..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 764..785
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 749..785
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..144
None	No IPR available	PANTHER	PTHR11208:SF98	RNA-BINDING KH DOMAIN-CONTAINING PROTEIN	coord: 26..776
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 197..223 score: 8.554656
IPR045071	KH domain-containing BBP-like	PANTHER	PTHR11208	RNA-BINDING PROTEIN RELATED	coord: 26..776

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh20G000390.1	CmaCh20G000390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048024	regulation of mRNA splicing, via spliceosome
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding