CmaCh19G009050 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G009050
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RNase III domain-containing protein
Location	Cma_Chr19: 8213884 .. 8216373 (+)
RNA-Seq Expression	CmaCh19G009050
Synteny	CmaCh19G009050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCATACAGCGTAGCCACACACAGAGAGAGGGGAAAAAGAATACTCCTAGGCCACGGAATTAAATTAAAATTTCGTTCCAGAATCCCTAAATTTCCTTCATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAGTAAGTATCGATTGCTTTGATTTTTCATCGTTTTCATCGACTGCTTCTTTTTTTCGCTCTCTCTCAACTTCCTCTGTTTTCTTCTGCTTGTTTCTTAATTATGATCATTAACTGTTAACCAACCCACTAATTACGATATTTCTTTTCTCTTTCGCCTCTTCAATTTTATACCTTTTTAAAAAAATTCAATTCTGAAATTTTTGTTTCAAAATTTAAAATCTTAAATATATTTTTTATTGCCTAAATTTAATTCAAACAATTTGCGTATTTGATTAATAATTTATCCATTTATTAAAATCATATGAACTAAAATTTAGATATTTGAAAATATATAAGATTAATGGAAGTTCTGTAATAGAATATAAAAATTGAAAATTTAATTAATTCGATTGCAACTATAAAATTTAATCTAAAAGTATATAAGGAACCTTTTCCATAACCATTATTTTTTAAATATAATTTCGTTCTTTTTTTCCTTTTTCGGTAAGGATTTTTTTTTCCCAAAATCTTTATTTTATATTTTTTTGTGCAATTTTAGTAGTAAAATCGGAGAGAAATATATTCCGTCTCTTTCCTAAAATTGCTTTTGAATTTTTTTCTTTTTCGAAAAACCCTCTTGTGTTTGATTTAAATTAGTCAATATTCGTTTAATTCTTTTTGTATAAAGGTAAACAATTTTTTTAGTTGATTCAACGAAATATAAAGTGACAGTAATAGTAATTAATTAATTAAAAAGACGTGATAATTCATGGAAATTAATTGTGGTTTAGGGCATGCTCTTACATTTATTCTTTTGAAATATTTGAATCTTTTAAATTAATTAATAAGACGTGAAAATTAAATGTAGCGTTAATTGTTTTGAAATCCTATTTTTTAATCTTTATTTTATTTCTTCTATTATATATTATATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGTTTTTGGGGAATAAATAGAATCATTTATTTTTCGAATTAAATTAGGTTGGGTATTAAAGTCATTATTTAAAATTTGTTTGTGTGTGACAACTAGATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGGTAAATACATTTAAAAAAACAACCCCGATCAAAATTTTGAATTATAATGGTAAGTTTTGATTGAAGTATAGGATGGTTTTATCTGTGTAGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAATCTATTCCTAATTATAATTACCCTTTTTATTTATTTATTTATTTATTAATTAATCATTCTTTTATCTCTTTCAAATCAG

mRNA sequence

ATTTCATACAGCGTAGCCACACACAGAGAGAGGGGAAAAAGAATACTCCTAGGCCACGGAATTAAATTAAAATTTCGTTCCAGAATCCCTAAATTTCCTTCATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAATCTATTCCTAATTATAATTACCCTTTTTATTTATTTATTTATTTATTAATTAATCATTCTTTTATCTCTTTCAAATCAG

Coding sequence (CDS)

ATGGAAGGAGGAGGAGACGGCGTCGATTTGTTGAAGCAGGAAGGCAGAGTCGGCGAGTCAACGGCGGCGAGTCTGGATGGAATGGAAGCTATTTTGAACTACGAGTTTCGAGACAAGAGATTGCTGGAAGAGGCTTTCACAGACGCGTCGTATTCGCCGGAAAATTGCTCGTCGTTCGAGCGATTGGAGTACGTAGGCGATTCGGTGTTGAATTTTCTAATAACAAGAGAGCAATACTTCTCGAATCCGAATCTGTCGCCCGGTTCACTGACTCGTCTCCGAGCGGCGAATGTGGACACCGAAAAGCTTGCTCGTGTTGCGATTACGCATGGATTTCATCGGTATCTTCGCCACAACAAGGCTGATCTTGATCAGAAAATAGAAGAGTTTAGCAAGAATATAGAGGAGTACCCATTGCATTCAAACGGAATGATTAAAGCTCCAAAGATACTAGCGGATATAGTAGAATCATGCATTGGAGCAGTTTTCACAGATAGTAACTCGATCGACACAGTTTGGACGATATTCAAGGGTCTAATGGAGCCATTGATAACATTGAAGACCATGAAAAGACACCCGATGACGGAGCTGACTGAAATGTGTCAAAAAAGGAACCTGAAGTGGGAATTCGTGGACTTATGGGAAGAAAGAAAGGAGATTCACGTTCTGATAGACAAGCAGCTGGTTGGGAAAGGAAGCTATGGGAAGAAGCTCATTGCACAAAATCGAGCTGCAAAAGATGCTTTGGACAACTTCCACACAATTCTTGGCCAATTTAATGAACCTTGTCAACCTATGTAA

Protein sequence

MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFHTILGQFNEPCQPM

Homology

[Close]

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot
Match: Q69KJ0 (Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0358800 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 5.5e-59
Identity = 118/236 (50.00%), Postives = 164/236 (69.49%), Query Frame = 0


Query: 28  MEAILNYEFRDKRLLEEAFTDAS--YSPENCSSFERLEYVGDSVLNFLITREQYFSNPNL 87
           +E++L YEFRDK L+EEA T  S  Y      ++ERLEY+GD+VL  +++RE + +   L
Sbjct: 42  VESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVLTCVVSREVFLTYGQL 101

Query: 88  SPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNGMI 147
            PG LTRLRAANVD EKLARVA+ HG H +LRH   +LD +I +F + +  YP+HSNG++
Sbjct: 102 QPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDFIEELSMYPIHSNGLL 161

Query: 148 KAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQKR 207
             PK+L D+VES IGA++ DSN + + VW +F+ L +PLI+L+T+ +HP++EL E CQK 
Sbjct: 162 DPPKVLCDVVESLIGAIYCDSNFNQEIVWQVFQKLADPLISLETLGKHPVSELFEFCQKT 221

Query: 208 NLKWEFV-DLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILGQ 259
               + V D W++   + VLID ++VG+ +Y  KK IAQNRAAK ALD     LGQ
Sbjct: 222 RRGVKIVKDEWDKNLTVEVLIDGEMVGRATYAQKKEIAQNRAAKAALDKLKETLGQ 277

[Close]

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot
Match: Q9SP32 (Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 3.6e-42
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1    MEGGGDGVDLLKQEGRVGESTAASLD--GMEAILNYEFRDKRLLEEAFTDASYSPENCSS 60
            +E   D VD   +   V ES   S+D  G+E  L YEF++K LL EA T AS      S 
Sbjct: 1533 VEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSC 1592

Query: 61   FERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH 120
            ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH
Sbjct: 1593 YQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRH 1652

Query: 121  NKADLDQKIEEFSKNIEE------YPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDT- 180
              + L+++I EF K ++       +     G  KAPK+L DIVES  GA+F DS    T 
Sbjct: 1653 GSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTA 1712

Query: 181  VWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVG 240
             W +F+ L++P++T +T+  HP+ EL E CQ++    E+          + V ID   VG
Sbjct: 1713 AWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVG 1772

Query: 241  KGSYGKKLIAQNRAAKDAL 250
                 +K +AQ  AA++AL
Sbjct: 1773 VAQNPQKKMAQKLAARNAL 1791

[Close]

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot
Match: Q9LTQ0 (Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 3.1e-41
Identity = 94/237 (39.66%), Postives = 150/237 (63.29%), Query Frame = 0


Query: 20  STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
           S   S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y
Sbjct: 55  SEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLY 114

Query: 80  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI---EE 139
            + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   LD+K++EFS+ +   ++
Sbjct: 115 LTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDD 174

Query: 140 YPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKR--HP 199
             +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+GL+EP++TL  +++   P
Sbjct: 175 LSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQP 234

Query: 200 MTELTEMCQKRNLKWEFVDLWEERKEIHVL-IDKQLVGKGSYGKKLIAQNRAAKDAL 250
           ++ L ++C K   + +  +  +    I V+ +D +L+  G    K IA+  AAK+AL
Sbjct: 235 VSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEAL 289

[Close]

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot
Match: Q6ATG6 (Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0271300 PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 3.4e-40
Identity = 93/231 (40.26%), Postives = 142/231 (61.47%), Query Frame = 0


Query: 28  MEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNPNLSP 87
           +E +L Y+FRD RLLEEA T  S++ ++  S++RLE+VGDS L    +   Y +NP L P
Sbjct: 40  VERLLRYQFRDGRLLEEALTHQSFA-DDAVSYQRLEFVGDSALGLAFSNFLYLTNPTLGP 99

Query: 88  GSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYP-------LH 147
           G L+ LRAAN+ TEKLARVA+ H  +  LR N   LD  + +F + +++ P        +
Sbjct: 100 GPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQFIETVKQEPEDDLSTVPY 159

Query: 148 SNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTE 207
              ++KAPK+LADIVE+   AV+ D    ++ +W + + L EP+IT +T+   P+T L E
Sbjct: 160 GGSVVKAPKVLADIVEAIAAAVYVDCKFDLEKLWKVTRWLFEPIITAETIDEQPVTMLHE 219

Query: 208 MCQKRNLKWEFVDLWEE--RKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDA 249
           +CQK     +F   W++     ++V +  +LVG GS  +K+IA+  AA+DA
Sbjct: 220 LCQKHGKMAQF-KTWQKGGMTVVNVFVAGELVGIGSSEQKVIAKLNAARDA 268

[Close]

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot
Match: Q8LMR2 (Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL1 PE=3 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.9e-39
Identity = 94/234 (40.17%), Postives = 137/234 (58.55%), Query Frame = 0


Query: 24   SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 83
            + D ++ +L  EF++K LL EA T AS      S ++RLE+VGD+VL+ LITR  +F+  
Sbjct: 1537 NFDTLKGVLGIEFQNKGLLVEAITHASRPSSGVSCYQRLEFVGDAVLDHLITRHLFFTYT 1596

Query: 84   NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSN- 143
            +L PG LT LRAA V+ E  ARVA+ H  H +LRH  + L+ +I EF K+++E  L    
Sbjct: 1597 DLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKDVQEELLKPGF 1656

Query: 144  -----GMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTE 203
                 G  KAPK+L DIVES  GA+F DS      VW +F+ L+ P++T +T+  HP+ E
Sbjct: 1657 NSFGLGDCKAPKVLGDIVESIAGAIFLDSGYDTSVVWKVFQPLLHPMVTPETLPMHPVRE 1716

Query: 204  LTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDAL 250
            L E CQ++    E+          + V +D   +G     +K +AQ  AA++AL
Sbjct: 1717 LQERCQQQAEGLEYKASRAGNIATVEVFVDGVQIGVAQNPQKKMAQKLAARNAL 1770

[Close]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL
Match: A0A6J1I0C1 (ribonuclease 3-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468279 PE=4 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 1.2e-149
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL
Match: A0A6J1GKQ4 (ribonuclease 3-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111455247 PE=4 SV=1)

HSP 1 Score: 528.9 bits (1361), Expect = 1.3e-146
Identity = 261/266 (98.12%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEGGGDG DLLKQEGR GESTAASLDGMEAIL YEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGGGDGGDLLKQEGRGGESTAASLDGMEAILKYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNG+IKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL
Match: A0A0A0K1J8 (RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 PE=4 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 8.5e-119
Identity = 220/264 (83.33%), Postives = 234/264 (88.64%), Query Frame = 0


Query: 3   GGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 62
           GGG+ V+        G  + ASLDG+EAILNYEFRDKRLLEEAFTDASYSPENCSSFERL
Sbjct: 20  GGGEAVN--------GSDSPASLDGIEAILNYEFRDKRLLEEAFTDASYSPENCSSFERL 79

Query: 63  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 122
           EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD
Sbjct: 80  EYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKAD 139

Query: 123 LDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEP 182
           L QKIEEF ++IEEYPLHSNGMIKAPK+LADIVES IGAVF DSN IDTVW IFK LMEP
Sbjct: 140 LHQKIEEFGRSIEEYPLHSNGMIKAPKVLADIVESTIGAVFADSNFIDTVWKIFKELMEP 199

Query: 183 LITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQN 242
           LITLKTMK+HPMTELTEMCQKR+LK EF D WEE KEI VLI+KQ+VGKGSY KKLIAQN
Sbjct: 200 LITLKTMKKHPMTELTEMCQKRSLKLEFRDRWEETKEIEVLIEKQVVGKGSYRKKLIAQN 259

Query: 243 RAAKDALDNFHTILGQFNEPCQPM 267
           RAAK+AL+N  T   QFN+PCQPM
Sbjct: 260 RAAKNALENLDTFFPQFNQPCQPM 275

[Close]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL
Match: A0A6J1C375 (ribonuclease 3-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111007843 PE=4 SV=1)

HSP 1 Score: 426.4 bits (1095), Expect = 8.7e-116
Identity = 208/243 (85.60%), Postives = 228/243 (93.83%), Query Frame = 0


Query: 24  SLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQYFSNP 83
           SL+ +EAIL YEFRDKRLLEEAFTD+SYSPENC SFERLEYVGDSVLNFLITREQYFSNP
Sbjct: 38  SLEEVEAILGYEFRDKRLLEEAFTDSSYSPENCFSFERLEYVGDSVLNFLITREQYFSNP 97

Query: 84  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNG 143
           +LSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK+DLD+KIEEF++ ++EYPLHSNG
Sbjct: 98  SLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKSDLDKKIEEFAEGMKEYPLHSNG 157

Query: 144 MIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQK 203
           +IKAPKILADIVES IGAVFTDSNS+DTVWTIF+GLMEPLITLKT+KRHPMTELTE+CQK
Sbjct: 158 LIKAPKILADIVESTIGAVFTDSNSMDTVWTIFRGLMEPLITLKTIKRHPMTELTEICQK 217

Query: 204 RNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIAQNRAAKDALDNFHTILGQFNEPC 263
           RNLK EFVD WE+ KE+ V IDKQLVGKGSY KKLIAQNRAAKDAL+N  T+L Q N+PC
Sbjct: 218 RNLKLEFVDSWEKTKEVQVFIDKQLVGKGSYRKKLIAQNRAAKDALNNLDTLLVQINQPC 277

Query: 264 QPM 267
           QPM
Sbjct: 278 QPM 280

[Close]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL
Match: A0A1Q3BNT8 (Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_13208 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 4.1e-81
Identity = 157/237 (66.24%), Postives = 192/237 (81.01%), Query Frame = 0


Query: 25  LDGMEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNP 84
           L+G+E IL Y+F +K LLEEAFT ASY SP+ C+S+ERLE+VGDSVLN L T+EQYF  P
Sbjct: 1   LEGVEEILGYKFGNKSLLEEAFTHASYTSPDQCASYERLEFVGDSVLNLLFTKEQYFLYP 60

Query: 85  NLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHSNG 144
           NL PG LTRLRAANVDTEKLARV+I HG HRYL H K  L+Q+I+EF++ I +YPLHSNG
Sbjct: 61  NLQPGDLTRLRAANVDTEKLARVSIRHGLHRYLCHKKPLLEQQIQEFTQAILDYPLHSNG 120

Query: 145 MIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMCQ 204
           ++  PK+LADIVES IGAVF DSN SID VW +FKGL+EP+I+++T+KRHP+TEL E+CQ
Sbjct: 121 LVDPPKVLADIVESTIGAVFIDSNLSIDIVWKVFKGLLEPIISVETLKRHPVTELYEVCQ 180

Query: 205 KRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRAAKDALDNFHTILGQ 259
           K+NLK +FVDLW+E     V ID QLVG+ +YG KK IA NRAAKDAL+N   IL +
Sbjct: 181 KKNLKVKFVDLWKESTAFEVFIDDQLVGRDTYGTKKEIAHNRAAKDALNNMWKILNE 237

[Close]

BLAST of CmaCh19G009050 vs. NCBI nr
Match: XP_022969213.1 (ribonuclease 3-like protein 3 [Cucurbita maxima])

HSP 1 Score: 538.9 bits (1387), Expect = 2.5e-149
Identity = 266/266 (100.00%), Postives = 266/266 (100.00%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. NCBI nr
Match: XP_023554575.1 (ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 4.0e-147
Identity = 262/266 (98.50%), Postives = 264/266 (99.25%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEGGGDG DLL+QEGR GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGGGDGCDLLEQEGRGGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNG+IKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. NCBI nr
Match: XP_022952611.1 (ribonuclease 3-like protein 3 [Cucurbita moschata])

HSP 1 Score: 528.9 bits (1361), Expect = 2.6e-146
Identity = 261/266 (98.12%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEGGGDG DLLKQEGR GESTAASLDGMEAIL YEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGGGDGGDLLKQEGRGGESTAASLDGMEAILKYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNG+IKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. NCBI nr
Match: KAG7011897.1 (Ribonuclease 3-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 528.1 bits (1359), Expect = 4.4e-146
Identity = 261/266 (98.12%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEG GDG DLLKQEGR GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGRGDGGDLLKQEGRGGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNG+IKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. NCBI nr
Match: KAG6572281.1 (Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 525.0 bits (1351), Expect = 3.7e-145
Identity = 260/266 (97.74%), Postives = 262/266 (98.50%), Query Frame = 0


Query: 1   MEGGGDGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60
           MEG GD  DLLKQEGR GESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE
Sbjct: 1   MEGRGDRGDLLKQEGRGGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFE 60

Query: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120
           RLEYVGDSVLNFLITREQYFSNPNLSPG+LTRLRAANVDTEKLARVAITHGFHRYLRHNK
Sbjct: 61  RLEYVGDSVLNFLITREQYFSNPNLSPGTLTRLRAANVDTEKLARVAITHGFHRYLRHNK 120

Query: 121 ADLDQKIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180
           ADLDQKIEEFSKNIEEYPLHSNG+IKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM
Sbjct: 121 ADLDQKIEEFSKNIEEYPLHSNGLIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLM 180

Query: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240
           EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA
Sbjct: 181 EPLITLKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYGKKLIA 240

Query: 241 QNRAAKDALDNFHTILGQFNEPCQPM 267
           QNRAAKDALDNFHTILGQFNEPCQPM
Sbjct: 241 QNRAAKDALDNFHTILGQFNEPCQPM 266

[Close]

BLAST of CmaCh19G009050 vs. TAIR 10
Match: AT4G15417.1 (RNAse II-like 1 )

HSP 1 Score: 251.1 bits (640), Expect = 9.7e-67
Identity = 132/253 (52.17%), Postives = 168/253 (66.40%), Query Frame = 0


Query: 6   DGVDLLKQEGRVGESTAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYV 65
           DG D  K  G         ++ +E ILNY+F+DK LL +AFTDASY  +   S+E LE +
Sbjct: 10  DGKDNTKTIGSADPDQLMEIESLEKILNYKFKDKSLLLKAFTDASYVDDKSESYELLELL 69

Query: 66  GDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQ 125
           GDS+LN  I  +     P  +PG LT+LRA NVDTEKLARVA+ H  + YLRH K  L++
Sbjct: 70  GDSILNMGIIYDFIKLYPKEAPGPLTKLRAVNVDTEKLARVAVNHQLYSYLRHKKPLLEE 129

Query: 126 KIEEFSKNIEEYPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDTVWTIFKGLMEPLIT 185
           +I EF + +E+YPLHSNG++K PK+LADIVES IGA+F D NS +TVW + K L+EP+I 
Sbjct: 130 QILEFVEAMEKYPLHSNGLLKVPKVLADIVESTIGAIFMDCNSTETVWKVIKPLLEPIIH 189

Query: 186 LKTMKRHPMTELTEMCQKRNLKWEFVDLWEERKEIHVLIDKQLVGKGSYG-KKLIAQNRA 245
           L  MK HPMTEL EMCQKRNLK    D WEE +     I+ + VG G +  KK  A+N A
Sbjct: 190 LDKMKSHPMTELNEMCQKRNLKLTSKDTWEENQTYCFHIEDKFVGCGHHPVKKETARNFA 249

Query: 246 AKDALDNFHTILG 258
           AK+A+DNF    G
Sbjct: 250 AKNAIDNFAKFFG 262

[Close]

BLAST of CmaCh19G009050 vs. TAIR 10
Match: AT1G01040.1 (dicer-like 1 )

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-43
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1    MEGGGDGVDLLKQEGRVGESTAASLD--GMEAILNYEFRDKRLLEEAFTDASYSPENCSS 60
            +E   D VD   +   V ES   S+D  G+E  L YEF++K LL EA T AS      S 
Sbjct: 1533 VEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSC 1592

Query: 61   FERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH 120
            ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH
Sbjct: 1593 YQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRH 1652

Query: 121  NKADLDQKIEEFSKNIEE------YPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDT- 180
              + L+++I EF K ++       +     G  KAPK+L DIVES  GA+F DS    T 
Sbjct: 1653 GSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTA 1712

Query: 181  VWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVG 240
             W +F+ L++P++T +T+  HP+ EL E CQ++    E+          + V ID   VG
Sbjct: 1713 AWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVG 1772

Query: 241  KGSYGKKLIAQNRAAKDAL 250
                 +K +AQ  AA++AL
Sbjct: 1773 VAQNPQKKMAQKLAARNAL 1791

[Close]

BLAST of CmaCh19G009050 vs. TAIR 10
Match: AT1G01040.2 (dicer-like 1 )

HSP 1 Score: 173.3 bits (438), Expect = 2.6e-43
Identity = 106/259 (40.93%), Postives = 148/259 (57.14%), Query Frame = 0


Query: 1    MEGGGDGVDLLKQEGRVGESTAASLD--GMEAILNYEFRDKRLLEEAFTDASYSPENCSS 60
            +E   D VD   +   V ES   S+D  G+E  L YEF++K LL EA T AS      S 
Sbjct: 1534 VEDDPDEVDGTLKNVNVPESVLKSIDFVGLERALKYEFKEKGLLVEAITHASRPSSGVSC 1593

Query: 61   FERLEYVGDSVLNFLITREQYFSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRH 120
            ++RLE+VGD+VL+ LITR  +F+  +L PG LT LRAA V+ E  ARVA+ H  H YLRH
Sbjct: 1594 YQRLEFVGDAVLDHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRH 1653

Query: 121  NKADLDQKIEEFSKNIEE------YPLHSNGMIKAPKILADIVESCIGAVFTDSNSIDT- 180
              + L+++I EF K ++       +     G  KAPK+L DIVES  GA+F DS    T 
Sbjct: 1654 GSSALEKQIREFVKEVQTESSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDSGKDTTA 1713

Query: 181  VWTIFKGLMEPLITLKTMKRHPMTELTEMCQKRNLKWEF-VDLWEERKEIHVLIDKQLVG 240
             W +F+ L++P++T +T+  HP+ EL E CQ++    E+          + V ID   VG
Sbjct: 1714 AWKVFQPLLQPMVTPETLPMHPVRELQERCQQQAEGLEYKASRSGNTATVEVFIDGVQVG 1773

Query: 241  KGSYGKKLIAQNRAAKDAL 250
                 +K +AQ  AA++AL
Sbjct: 1774 VAQNPQKKMAQKLAARNAL 1792

[Close]

BLAST of CmaCh19G009050 vs. TAIR 10
Match: AT3G20420.1 (RNAse THREE-like protein 2 )

HSP 1 Score: 170.2 bits (430), Expect = 2.2e-42
Identity = 94/237 (39.66%), Postives = 150/237 (63.29%), Query Frame = 0


Query: 20  STAASLDGMEAILNYEFRDKRLLEEAFTDASYSPENCSSFERLEYVGDSVLNFLITREQY 79
           S   S++ +E ILNY+F +K LL+EA T  S +  +  S+ERLE++GDS +   I+   Y
Sbjct: 55  SEMESMEAVEKILNYKFSNKSLLKEAITHTSCT--DFPSYERLEFIGDSAIGLAISNYLY 114

Query: 80  FSNPNLSPGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNI---EE 139
            + P+L P  L+ LRAANV TEKLARV++ HG + +LR N   LD+K++EFS+ +   ++
Sbjct: 115 LTYPSLEPHDLSLLRAANVSTEKLARVSLNHGLYSFLRRNAPSLDEKVKEFSEAVGKEDD 174

Query: 140 YPLHSNGMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKR--HP 199
             +   G++KAPK+LAD+ ES  GAV+ D N  +  +W IF+GL+EP++TL  +++   P
Sbjct: 175 LSVSYGGLVKAPKVLADLFESLAGAVYVDVNFDLQRLWVIFRGLLEPIVTLDDLQKQPQP 234

Query: 200 MTELTEMCQKRNLKWEFVDLWEERKEIHVL-IDKQLVGKGSYGKKLIAQNRAAKDAL 250
           ++ L ++C K   + +  +  +    I V+ +D +L+  G    K IA+  AAK+AL
Sbjct: 235 VSMLFKLCHKHKKRIDIKNWKDGNVSIAVIYLDDELLASGRAENKDIARLIAAKEAL 289

[Close]

BLAST of CmaCh19G009050 vs. TAIR 10
Match: AT3G03300.1 (dicer-like 2 )

HSP 1 Score: 135.2 bits (339), Expect = 7.7e-32
Identity = 79/189 (41.80%), Postives = 113/189 (59.79%), Query Frame = 0


Query: 28   MEAILNYEFRDKRLLEEAFTDASY-SPENCSSFERLEYVGDSVLNFLITREQYFSNPNLS 87
            ME++LNY F DK LL EA T  SY  PE    ++RLE++GDSVL++LIT+  Y   P LS
Sbjct: 1152 MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLS 1211

Query: 88   PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLDQKIEEFSKNIEEYPLHS----N 147
            PG LT +R+A+V+ E  A VA+    H+++ +    L + I       E+  L S     
Sbjct: 1212 PGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHISRTVSEFEQSSLQSTFGWE 1271

Query: 148  GMIKAPKILADIVESCIGAVFTDSN-SIDTVWTIFKGLMEPLITLKTMKRHPMTELTEMC 207
              I  PK+L D++ES  GA+F DS  + + V+   K L+  +IT +T+K HP+ ELTE+C
Sbjct: 1272 SDISFPKVLGDVIESLAGAIFVDSGYNKEVVFASIKPLLGCMITPETVKLHPVRELTELC 1331

Query: 208  QKRNLKWEF 211
            Q    KW+F
Sbjct: 1332 Q----KWQF 1336

The following BLAST results are available for this feature:

BLAST of CmaCh19G009050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q69KJ0	5.5e-59	50.00	Ribonuclease 3-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0...	[more]
Q9SP32	3.6e-42	40.93	Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana OX=3702 GN=DCL1 PE=1 SV...	[more]
Q9LTQ0	3.1e-41	39.66	Ribonuclease 3-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=RTL2 PE=1 SV=1	[more]
Q6ATG6	3.4e-40	40.26	Ribonuclease 3-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0...	[more]
Q8LMR2	2.9e-39	40.17	Endoribonuclease Dicer homolog 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DCL...	[more]

BLAST of CmaCh19G009050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0C1	1.2e-149	100.00	ribonuclease 3-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111468279 PE=4 S...	[more]
A0A6J1GKQ4	1.3e-146	98.12	ribonuclease 3-like protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111455247 PE=4...	[more]
A0A0A0K1J8	8.5e-119	83.33	RNase III domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G041940 P...	[more]
A0A6J1C375	8.7e-116	85.60	ribonuclease 3-like protein 3 OS=Momordica charantia OX=3673 GN=LOC111007843 PE=...	[more]
A0A1Q3BNT8	4.1e-81	66.24	Ribonuclease_3 domain-containing protein (Fragment) OS=Cephalotus follicularis O...	[more]

BLAST of CmaCh19G009050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969213.1	2.5e-149	100.00	ribonuclease 3-like protein 3 [Cucurbita maxima]	[more]
XP_023554575.1	4.0e-147	98.50	ribonuclease 3-like protein 3 [Cucurbita pepo subsp. pepo]	[more]
XP_022952611.1	2.6e-146	98.12	ribonuclease 3-like protein 3 [Cucurbita moschata]	[more]
KAG7011897.1	4.4e-146	98.12	Ribonuclease 3-like protein 3, partial [Cucurbita argyrosperma subsp. argyrosper...	[more]
KAG6572281.1	3.7e-145	97.74	Endoribonuclease Dicer-like 2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh19G009050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15417.1	9.7e-67	52.17	RNAse II-like 1	[more]
AT1G01040.1	2.6e-43	40.93	dicer-like 1	[more]
AT1G01040.2	2.6e-43	40.93	dicer-like 1	[more]
AT3G20420.1	2.2e-42	39.66	RNAse THREE-like protein 2	[more]
AT3G03300.1	7.7e-32	41.80	dicer-like 2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000999	Ribonuclease III domain	SMART	SM00535	riboneu5	coord: 40..189 e-value: 2.7E-32 score: 123.3
IPR000999	Ribonuclease III domain	PFAM	PF00636	Ribonuclease_3	coord: 60..166 e-value: 7.4E-22 score: 78.0
IPR000999	Ribonuclease III domain	PROSITE	PS00517	RNASE_3_1	coord: 60..68
IPR000999	Ribonuclease III domain	PROSITE	PS50142	RNASE_3_2	coord: 25..167 score: 33.77779
IPR000999	Ribonuclease III domain	CDD	cd00593	RIBOc	coord: 40..185 e-value: 4.07414E-39 score: 131.196
IPR036389	Ribonuclease III, endonuclease domain superfamily	GENE3D	1.10.1520.10	Ribonuclease III domain	coord: 20..192 e-value: 9.9E-49 score: 167.6
IPR036389	Ribonuclease III, endonuclease domain superfamily	SUPERFAMILY	69065	RNase III domain-like	coord: 25..186
None	No IPR available	GENE3D	3.30.160.20		coord: 193..261 e-value: 4.4E-7 score: 31.9
None	No IPR available	PANTHER	PTHR14950	DICER-RELATED	coord: 22..257
None	No IPR available	PANTHER	PTHR14950:SF54	RNASE II-LIKE 1	coord: 22..257
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 149..252

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G009050.1	CmaCh19G009050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030422	production of siRNA involved in RNA interference
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004525	ribonuclease III activity
molecular_function	GO:0003723	RNA binding