CmaCh19G008820 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGCTACGGTGATCGATGGCAACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCTGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGCTACGGTGATCGATGGCAACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCTGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA ATGTGGCGGTTGGCGGCGGCCGTGAGAAGAAACCTCCACAACATAAGGAAGAGCCCACGAGTGGCAGATGAAAGCATGTACAGCGCCGGCGGCGGAGCTGACGGCGGAGCTACGGTGATCGATGGCAACCGGAGAGAAGGAAATTCATATGGGTTTTCAATGATTTACACTCTCCTTCGAACCCCATTTTCGCTTCTCTCTTGCTTCTCTCAACCTCACGTTAATGGCGTCGACGGGATGTGGGTCTCTGGCGAGTTTCCAAGAATCTCGGAAGTTAATCATCTTATGGTAAGCGACAGCATGCGATATGCAATCTTAATGTAA MWRLAAAVRRNLHNIRKSPRVADESMYSAGGGADGGATVIDGNRREGNSYGFSMIYTLLRTPFSLLSCFSQPHVNGVDGMWVSGEFPRISEVNHLMVSDSMRYAILM Homology
BLAST of CmaCh19G008820 vs. ExPASy TrEMBL
Match: A0A6J1HZK3 (uncharacterized protein LOC111468352 OS=Cucurbita maxima OX=3661 GN=LOC111468352 PE=4 SV=1) HSP 1 Score: 220.7 bits (561), Expect = 2.9e-54 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CmaCh19G008820 vs. ExPASy TrEMBL
Match: A0A5D3BTM8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00140 PE=4 SV=1) HSP 1 Score: 198.7 bits (504), Expect = 1.2e-47 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of CmaCh19G008820 vs. ExPASy TrEMBL
Match: A0A6J1C6U0 (uncharacterized protein LOC111007908 OS=Momordica charantia OX=3673 GN=LOC111007908 PE=4 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.5e-42 Identity = 88/107 (82.24%), Postives = 95/107 (88.79%), Query Frame = 0
BLAST of CmaCh19G008820 vs. ExPASy TrEMBL
Match: A0A1S3C134 (uncharacterized protein LOC103495667 OS=Cucumis melo OX=3656 GN=LOC103495667 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 2.6e-42 Identity = 90/106 (84.91%), Postives = 95/106 (89.62%), Query Frame = 0
BLAST of CmaCh19G008820 vs. ExPASy TrEMBL
Match: A0A6J1ER34 (uncharacterized protein LOC111437033 OS=Cucurbita moschata OX=3662 GN=LOC111437033 PE=4 SV=1) HSP 1 Score: 176.8 bits (447), Expect = 4.9e-41 Identity = 89/108 (82.41%), Postives = 94/108 (87.04%), Query Frame = 0
BLAST of CmaCh19G008820 vs. NCBI nr
Match: XP_022969305.1 (uncharacterized protein LOC111468352 [Cucurbita maxima]) HSP 1 Score: 220.7 bits (561), Expect = 6.1e-54 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CmaCh19G008820 vs. NCBI nr
Match: XP_023554647.1 (uncharacterized protein LOC111811837 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 217.6 bits (553), Expect = 5.1e-53 Identity = 106/107 (99.07%), Postives = 106/107 (99.07%), Query Frame = 0
BLAST of CmaCh19G008820 vs. NCBI nr
Match: KAG6572248.1 (hypothetical protein SDJN03_28976, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011878.1 hypothetical protein SDJN02_26785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 215.7 bits (548), Expect = 1.9e-52 Identity = 104/107 (97.20%), Postives = 105/107 (98.13%), Query Frame = 0
BLAST of CmaCh19G008820 vs. NCBI nr
Match: XP_038888385.1 (uncharacterized protein LOC120078235 [Benincasa hispida]) HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47 Identity = 99/112 (88.39%), Postives = 104/112 (92.86%), Query Frame = 0
BLAST of CmaCh19G008820 vs. NCBI nr
Match: KAA0059153.1 (uncharacterized protein E6C27_scaffold430G00710 [Cucumis melo var. makuwa] >TYK02535.1 uncharacterized protein E5676_scaffold201G00140 [Cucumis melo var. makuwa]) HSP 1 Score: 198.7 bits (504), Expect = 2.5e-47 Identity = 99/111 (89.19%), Postives = 103/111 (92.79%), Query Frame = 0
BLAST of CmaCh19G008820 vs. TAIR 10
Match: AT5G35732.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04795.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 109.4 bits (272), Expect = 1.8e-24 Identity = 55/107 (51.40%), Postives = 73/107 (68.22%), Query Frame = 0
BLAST of CmaCh19G008820 vs. TAIR 10
Match: AT2G04795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits to 18 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21 Identity = 50/107 (46.73%), Postives = 70/107 (65.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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