CmaCh19G008560 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G008560
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	sodium/potassium/calcium exchanger 1-like
Location	Cma_Chr19: 8026201 .. 8026710 (-)
RNA-Seq Expression	CmaCh19G008560
Synteny	CmaCh19G008560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA

mRNA sequence

ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA

Coding sequence (CDS)

ATGAAGTTAGTGATTTCAGCTTCTGTGCTCTCTGCAATGGTGTTTTACTCATCTCTCCTCCCTTTCCTCCACTCTTTGAACCTTTATATCTCTGCAACAATCCATAAAAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATCGTTCGAAACTCCGGTCTTATCAGTAGCTCTGGCCGCGAACAGTGCGGCGGACATGGCAGCAGAGAAGCTGAAGCTCTAGGGGCTGCAATGGAGGATTCCACCACAATAATTGAGAGAAAAGTTGAAGATGGAGAAGAAAGGGAAAATGGGTTTATTGCAGAAGAAGAACAAGAAAGTGAAAGATTGGTTACAGAAGAAGAACAACAACAAGAACACGAAGAAGAACAAGAAGAAGAAAAAGCAGAAGCAGAAGAAGTTGGGGCTTTGAGCAATGAAGAATTGGACAAGAAATTTGAAGAATTTATCAGAAAAATGAAGGCAGGAATCAAACTGGAATCACAACAAGTGCTTATTTTGTAA

Protein sequence

MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQEHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL

Homology

[Close]

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 1.6e-75
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

[Close]

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41
Identity = 116/169 (68.64%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           G    GG  SR AEAL A+M D ++ IE KVED EER NG I ++++ESER + E++   
Sbjct: 61  GDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNGLI-QKDEESERSIVEDDDND 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           + ++E        EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Sbjct: 121 DDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 4.2e-39
Identity = 115/168 (68.45%), Postives = 129/168 (76.79%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MK++ISAS+LSAMV YSSLLPFLHSLNLYISATIHKNY+FLLCNGLLVFIVRNSGLI  S
Sbjct: 1   MKILISASLLSAMVLYSSLLPFLHSLNLYISATIHKNYIFLLCNGLLVFIVRNSGLIGGS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           G EQ GG G                 +E KVEDGEERENG +AE+E ESE+L+TE+E   
Sbjct: 61  GEEQ-GGGGK----------------VESKVEDGEERENGLVAEQE-ESEKLITEDE--- 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLI 169
           EHEEE+EEE    EE G LSNEEL++K EEFIRKMKA IK E QQVL+
Sbjct: 121 EHEEEEEEE----EEDGGLSNEELNQKCEEFIRKMKAEIKFELQQVLV 143

[Close]

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 9.1e-34
Identity = 110/170 (64.71%), Postives = 127/170 (74.71%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKLVISAS+LSAMVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++
Sbjct: 1   MKLVISASLLSAMVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNT 60

Query: 61  GREQCGGHGSREAEALGAA-MEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQ 120
             E+  G+     EALGAA M D    IE KVE  EER NG +  E+ + E L+T+ E +
Sbjct: 61  SDERSSGN-----EALGAATMADGNRKIESKVEIEEERGNGLVVNED-KIENLITDNEVE 120

Query: 121 QEHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           +E     EEE  E EE+    +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Sbjct: 121 EERFMSYEEE--EEEEI----DEELNKKCEEFIRKMKAGIKFESQQLFIL 158

[Close]

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.6e-30
Identity = 103/165 (62.42%), Postives = 117/165 (70.91%), Query Frame = 0


Query: 13  MVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGGHGSRE 72
           MVFYSSLLPFLHSLNLYIS+TIHKNYMFLLCNGLLVFIVRNSGLI ++  EQ     S  
Sbjct: 1   MVFYSSLLPFLHSLNLYISSTIHKNYMFLLCNGLLVFIVRNSGLIGNTCNEQ-----SSR 60

Query: 73  AEALGA-AMEDSTTIIERK--VEDGEERENGFIAEEEQESERLVTEEEQQQE-----HEE 132
            EALGA  M D    IE K  VE  EER NG +  EE + E L+T+ E ++E      EE
Sbjct: 61  NEALGAVTMADGNRKIESKVEVEVEEERRNGLVVNEE-KFENLITDNEDEEERFISYEEE 120

Query: 133 EQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           E+EEE+ E EE     +EEL+KK EEFIRKMKAGIK ESQQ+ IL
Sbjct: 121 EEEEEEEEEEEEEEEIDEELNKKCEEFIRKMKAGIKFESQQLFIL 159

[Close]

BLAST of CmaCh19G008560 vs. NCBI nr
Match: XP_022969273.1 (sodium/potassium/calcium exchanger 1-like [Cucurbita maxima])

HSP 1 Score: 292.0 bits (746), Expect = 3.4e-75
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ
Sbjct: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Sbjct: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 169

[Close]

BLAST of CmaCh19G008560 vs. NCBI nr
Match: KAG7011863.1 (hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 275.0 bits (702), Expect = 4.3e-70
Identity = 165/172 (95.93%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQ-ESERLVTEEEQQ 120
           GREQCGGHGSREAE+ GAAMEDSTTIIERKVEDGEERENGFIAEEEQ ESERLVTEEEQQ
Sbjct: 61  GREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENGFIAEEEQEESERLVTEEEQQ 120

Query: 121 QEHE--EEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           QEHE  EEQEEE+ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Sbjct: 121 QEHEEQEEQEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 172

[Close]

BLAST of CmaCh19G008560 vs. NCBI nr
Match: KAG6572225.1 (hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 271.9 bits (694), Expect = 3.6e-69
Identity = 164/177 (92.66%), Postives = 167/177 (94.35%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS
Sbjct: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQ-ESERLVTEEEQQ 120
           GREQCGGHGSREAE+ GAAMEDSTTIIERKVEDGEERENGFIAEEEQ ESERLVTEEEQQ
Sbjct: 61  GREQCGGHGSREAESPGAAMEDSTTIIERKVEDGEERENGFIAEEEQEESERLVTEEEQQ 120

Query: 121 QEH-------EEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           QEH       EEE+EEE+ EAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL
Sbjct: 121 QEHEEQEEQEEEEEEEEEEEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 177

[Close]

BLAST of CmaCh19G008560 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata])

HSP 1 Score: 179.5 bits (454), Expect = 2.4e-41
Identity = 116/169 (68.64%), Postives = 134/169 (79.29%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           G    GG  SR AEAL A+M D ++ IE KVED EER NG I ++++ESER + E++   
Sbjct: 61  GDRHSGG-DSRGAEALEASMADGSSKIESKVEDREERGNGLI-QKDEESERSIVEDDDND 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           + ++E        EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Sbjct: 121 DDDDE--------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 159

[Close]

BLAST of CmaCh19G008560 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.1 bits (453), Expect = 3.2e-41
Identity = 116/169 (68.64%), Postives = 131/169 (77.51%), Query Frame = 0


Query: 1   MKLVISASVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSS 60
           MKL+ISAS+LSAMVFYSSLLPFLHS NLYISAT HKNYMFLLCNGLLVFIVRNSGLIS S
Sbjct: 1   MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCS 60

Query: 61  GREQCGGHGSREAEALGAAMEDSTTIIERKVEDGEERENGFIAEEEQESERLVTEEEQQQ 120
           G    GG  SR AEAL AAM D ++ IE KVED EER NG I ++++ESER + E++   
Sbjct: 61  GDRHSGG-DSRGAEALEAAMADGSSKIESKVEDREERGNGLI-QKDEESERSIVEDDDDD 120

Query: 121 EHEEEQEEEKAEAEEVGALSNEELDKKFEEFIRKMKAGIKLESQQVLIL 170
           +            EEVGALS EEL+KK EEFIRKMKAGIKLESQQ+L+L
Sbjct: 121 DD-----------EEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL 156

[Close]

BLAST of CmaCh19G008560 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). )

HSP 1 Score: 43.9 bits (102), Expect = 1.5e-04
Identity = 60/183 (32.79%), Postives = 104/183 (56.83%), Query Frame = 0


Query: 8   SVLSAMVFYSSLLPFLHSLNLYISATIHKNYMFLLCNGLLVFIVRNSGLISSSGREQCGG 67
           S+L++  FY  L  F+  L   ++  + KNYMFLLCNGL+V + + SGL++SS   +   
Sbjct: 24  SLLTSHDFY--LYRFMIQL---VTHAVDKNYMFLLCNGLVVVVAKCSGLVASSKPIEKIW 83

Query: 68  HGSREAEALGAAMEDSTTIIERKVE-DGEERENGFIAEE---EQESERLVTEEEQQQEHE 127
             + +    G   E  TTI+E + + D       F+AEE   E++++   TE+ ++++ +
Sbjct: 84  SNTDKTFDYG-DFESYTTILELEYKSDHGIGTESFLAEEVTVEEDTKHQETEDNEEEDDD 143

Query: 128 E------EQEEE---------KAEAEEVGALSN--EELDKKFEEFIRKMKAGIKLESQQV 170
           +      + EEE         + E   VG +++  EE++KKF+EFIRKMK  +++E+++ 
Sbjct: 144 DNTLADNDGEEECGLRGGSINEEEEGNVGVMTSTEEEMNKKFDEFIRKMKEELRIEAKRH 200

The following BLAST results are available for this feature:

BLAST of CmaCh19G008560 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G008560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I0H9	1.6e-75	100.00	sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EJY9	1.2e-41	68.64	uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC1114352...	[more]
A0A6J1C4P4	4.2e-39	68.45	ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 P...	[more]
A0A0A0K349	9.1e-34	64.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1	[more]
A0A1S3CG16	3.6e-30	62.42	gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1	[more]

BLAST of CmaCh19G008560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969273.1	3.4e-75	100.00	sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]	[more]
KAG7011863.1	4.3e-70	95.93	hypothetical protein SDJN02_26769, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6572225.1	3.6e-69	92.66	hypothetical protein SDJN03_28953, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022928452.1	2.4e-41	68.64	uncharacterized protein LOC111435260 [Cucurbita moschata]	[more]
XP_023530308.1	3.2e-41	68.64	uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh19G008560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G13130.1	1.5e-04	32.79	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 102..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 104..118
None	No IPR available	PANTHER	PTHR34947:SF3	TRANSMEMBRANE PROTEIN	coord: 1..167
None	No IPR available	PANTHER	PTHR34947	TRANSMEMBRANE PROTEIN	coord: 1..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008560.1	CmaCh19G008560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane