CmaCh19G008420 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G008420
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	long chain acyl-CoA synthetase 8
Location	Cma_Chr19: 7960298 .. 7966436 (+)
RNA-Seq Expression	CmaCh19G008420
Synteny	CmaCh19G008420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGAAACCAGCAAACAGAGATGGGAAAACCAGCTGAGAGAAAGGGGAGAGGGGTTTGTAAGAAAAAATTGATCTATTTGGTGTGAGGAAGACGAGGAAGGAGAGAGTAGTAAAGGACTTTTTGGGTTTTTCACTTTTCTTTTTTTTTCTTTTATTATTAATAATATGAGAAATAAAAATATAATTATAAATTATGTAAATTTCAATTTAATTACTTTTAAAAATAGTTTATTACCTTATTTGTGAATTAGCGTAAAGATATTAATATATATATATATATATATATCCTAACCATTTTATTATATAATCTCTTATTATTTAAGAAAAATTAAACATTTTAATTTTCTTTAAAATATAATGAACAGCTAATTAATAGTTATTATTATTGTAAGTGAAAAATTAAATTATCATTTTATCCACTTAATTATACTCGAATTAATCTTACTTTTTATATTTATTATTGTACTACAAATTATTGTCGTTAAAAAAAATTACATCAAATTATGAAAATTAAAACAAGTGGTTTTAATAATTTTATTTTGATTTTTAAAATTTAGTTAATAATTCAAATGGCTGTTTTAATAAATAAATAAATAAATCATGGTTAAAAACAGTCCGAGTAAATATGCACAATTTTCAAAATAAAAAAAAAACCGTCTAATAAATATTTGTCCAATGGGATTTTTTTAATAAACTTAATTATGAAAAAAAGGTTTAAAATTTATTTTTTAATTTTGGGTAAATTCATCCAAATTAATCATTTTAATTATCATTGATATAAAATAACATTTATAAATTTAAGTTAAAACATATCGGATGATGAAAGTCTCATATAGACTAATTTAGGAAATGATCATACGTTTATAATTAATAAATACTATATATTGTGAGTTATTTTAGGAAGTTCAAAGCAAAACCATGAAAACTTATGCCGTTAAAATGGACGAGAGAATTTTTTTTTTTTTTTTTAAAAAAAAGAATGTGGTTGTTAGAACATGTTTTAGTATACAAACAAAAAGAAAAAGTTAATTTTTTCAACAAAAAAAAAATGTCAAATCACAATAATTTATAGGCTAGGTTATAAACGAACTAAAATAAAATAATTTTTGAAAAAAAAAAACTATCAAAGGAAGGGTATTATTTGTCACTATCAATAATTATTACAATTTATTAAATGTAATTAAATAAATAAATAAATTCATTACAAATTTTAAACGACAGTAAATATCCAACAACTTTCCATGGTCGACCCTCGTACGTGCCATTTTGAAGGCATGATTGAAAGCGTTATCAATGCAATAGTCACGTGTTCATTATTTTTGGCATGTGGAGTACGTGTGATTTTGGATGGTAAGTGTCACATTTATTTGTCAAATCACAATATAGTTTATAAATGAAATAAAATAAAATAATTTTTGAAATAAAAAAACTAAGGGTATTATTTTTCAAAATATTTTTAAATACTCATTTTATGTTATATTAAAAAAATATTAATAATTAACCTTCAATAATTATTACTATTTATTAATTGTAATTAAAAATAAATAAATAAATTCAATACGAATTTTAAACGAGAGTAAATATCCAACAACTTCCCATAGTTGGCCCTCCGCACGTGCCATTTTCAAGGCACGATTGAAAGCATTGCCAATACAATAGTCATGTATTGATTATTTTCGACATTTTGGATGGTAAATAACAGATTTATTTGTCAGATGAATAAATGAAATAAAATAAAATAATTTTTTAAATAAAAAAACTAACCAAGGAAGGGAATTATTTGTCAAAATATTTGTAGTTATATTAAAAAATATATATTAATAATTAACACGATCAATAATTATTACTATTTATTAATTGTAATTAAAAAAAATAAAAATTCAATACAAATTTTAAAAAATATCCAACAATTTCCCATGGTGGACCCTCGCACGTGCCATTTTGAAAGCACGATTGAAAGCATTATCAATACAATAGTCACCGTGTCGATTATTTTCGGCATGTGGAGTACGTATGATTTTGGACAGTAAGTGGCGCATTTTTATATAAAAACCATGACACATATGCCAAAACTACCCTTAACTAAACCCTTTGACAAGCAATACAGAGTGGGGCTTTTTCGTAATCTTATTAATCTCCAAACGATGGCGCGTAGCAATCCACCTCCCGCCCATAAACTTCATCTCCGTTGAACGTTATAAGTCAGAAACCACCGACCTCCGACGACCACCGTCAAAGCTTCAGCCGGCTGTTCATAGCTTCGTTTAGCTTCGTTTACGAAAGTCAGTGTGATCCATTTTCCGTTTCAGCTCCCTCACTCACGGTAATCGTTCAGGTATTTCATCCTCCGTACATTTTCACAGTTTCTCATTGCTATAGAAACACAGCGCCGCCGTAGCTCTCGTCTACCTATGCTTCAAGGTTGATCTTATTGTATAGTTCCGTTTTTTCCTGGTTGTTCTTCAGTGCGATGAATTTGTGGATTGAGTATTTCTTTGGTTTGTTTCGAGTGCGGGGATCATTTACACAAAAAGCAGAGTTGATCTGTGATAATGAAATTCTAACATGCTCAATTTGTGATCGATATTAAACTTTGCGTATGCTGTTATTGGATTGGGGGTTGATAGCTCTGTACTAATTTTTTGCTCTTTTACCGTTTCTTATAATTTGTAAACGAGGTCCAAATGTTCGGTGTCCTCTGTTTTCTTCAATAAATCACGTAAGTTTTTCATCTGTTCTTCAGTGATACGAGAATGCCAATGAAAATTGTTCGTGTTCCATTTCATTTGGAAAATGGCGATACTAAGATTGGGCTACCGCACGAGAGATTTATTGCTTTTTCAGAATTCTTAAGCTGTGCTTTCGAACTTTTTCATTGTAGTGAAGCCTTTTGATCGTGGATTTGGAGTCTTTGTTTTGTCTATGCTATTTTCTTGGTATAATTACACCGATAAATTGAGCATTCTGGAATTGTGCTGTGACGTTGTAGCATTTTTATGCTAAGTTATTTCTTTACTCTACTATGACTTGAAAGTTGAATAATTCACTAACCATAATCTCGTAGGAATATGCATTCACGATGGGGGGATTCCATGGAAAGTATATGGAAATAAAAAATCTTAGAAAATATACACATTGGAGATTACTTGTCAGTTTGGAGAGGCTGTGACATTATAGGGATTGTGGTGTAACACTCTAAGCCTACAGCTACCAGATATTGTCCTTTTGGCTTTCTCTTTTAGACTTCCCCTCAAGGTTTTTAAAATGCATCTGTTTGGGGAAGGTTTCTACACCATTATGAAAAATGCTTCGTTCTTTTCCCTAACCTATGTGGGATCTCACAGTCGGAACCATTTTTATTGGCATCCTCATAGCAATATTACTTTCAAGATCTTTTTTGGTAATGAAAAGATGGAAACAAAGAGGAGTTCCTACGGAAGTTGGTGAGGATCCAGGTTATGCCGTGACTGAACTTTCTAATGTTCGTTGGAAAGCGGCGACAACCATAGCAGCATTATTTTAGCAATCACGTCAAAAGCATTCAAAAAATATATTCCTTGGCTCAAGAAAGTTGATTTCCAAGGAATTTGTCATTGCTACTGATGGTAGGAAGTTTGAAAAACTTAACTTAGGTGAATGTGAATGGCAGGCTTATGGAGAAGTGTTTGATCGTGCTTGCAACTTTGCTTCTGGGCTTGTAAGGTTTAGCCATGATGTTGATACTCGTGTTGCCGTTTATTCGAAAACTCGTGCTGAGTAGTTTACTGCCTTTCAGGTTATCTTATTTGTTGTGCTTCAACATTTTTTCTCTACAGCTCTACCCTTGGTTTTAACCTTCAGAGCTTTTTATCTTCTTTGTTGCTTCTTCAGTTATTGTAGCTGTAGTATGGACTTCTGCATTGTAATTACAATCTTGAAAGTACCCTTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTCTTTATGAGTGTCTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAAAACTTGAGGGGAAGGCTGAAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTAGGGTCGTTATAAATGGTATAAGAGCCAAACATCGGACGATGTGCCAGCAAGGACATTAGGCTCCGAAGGGGGGTGGATTGTGAGATCGCACATCGATTGGACAGAGGAACGAGTGTCAATAAGGACGCTGGGCCCTGGGGGGTGGACACTGGGCGGTGTGCCAGTGAGAACGCTATGCCCCGAAAAGAGGTGGATTGTGAGATCCCACATTTGTTGGAGAGAGGAACGAGTGTCAGCGAGGACGTTGGGCCCCAAAGAGGGGTGAATTGCAAGGTCCCACATCGGTTGGAGAGGAGAACAAATCATTCTTTATAAGTGTGTGAAAACCTCTCCCTAACCGACACATTTTAAAATTCTTGATGGGAAGTTCGAAAGGACCCAAAGAGGACAATATTTGTTAGCGGTGGGCATAGGGTTGTTCTTTCATTCATTTAACGCACCTTCTATAACTGATATGCCATTTTGACAAGGGCTAGCGTACACGATCTGCTGGTTACTTCAAGAACCCAGAAAAGACTAACAAGGTCTACAAGGTAACTTTTTTACCATATTTCCATTAGATTTCGGATTTCTGCTTACAACAGAATGGTGAGAAGTGCATGTGCTAGTTTTACTTGGGAGATATAGGAACATTTCATCATGATGGATGCCTTGAGATCATGGATAGGACGAACTTCAGGATGGAGAATATATATCCCTAGGGAAGGTGAGGTTTTAAACTTCAAATTTTGCTCCTAACATATTGGGTTTAAATTCTTCTTCTGTTCATATAGGCCGAGGCAGCCCTACTGTCGAGAAAGTACGTGGATAATGTTATTATGGTATATGCATATCCCTTTCACAATTATTGTGTACCTCTTGTTGTCACTTTGCGTCCAGCCCTTGAGAAGTGGGCCAAAGAAGCTGGCATCAATTATGGGGACTTTTCTCAGCTATGTGAAAATGGTGAAACCATTAGTGAGTTTTCAAGGTTTGCTAATTCTACTCTTATCTATTGAAATGCAGAAGAATAATAGAAACAGTCCAATGAAAACAGAAAAGATGCGATAATCCGTTCCATAGGTTATTGCATAATTCAATTGGCAAGGCACTTTTGTAATTGGTAGGTATAAATTTTCTGTTGGGAATCACGAACCTCCTCAATGGTATGATATTTGTCCAGTTTGATCATAAGCTCTCATGACTTTGTTTTTTGTTTCCTCAAAAGGCCTCGTATCAATGGAGATGTATTGTTTATTTATAAATCCATGATCAACCCCTTAATTAGCTGATGTGGGCCTCTTCTCCCAACAATCCTCCCCTCAAATAAGTCTCTCCGGAAGTCTATGGAGCCCTCGAACAGCCTCCACTTAATCGAGACTTGACTCCTTTCTCTAGAGCCCTCGAACAAAGTACACTATTTGTTCGATACTTGAGTCACTTTTGTCTACACCTTCGAGACTACCAACTTCTTTGTTCGACACTTGAGGATTCAATTAGCACGACCAAGTTAAGGGTATAACTCTGATACCATGTTGGGAATCACAAACCTCTACAATGATATGATATTGTCTACTTTGAGGATAAACTCTCATGGTTTTGCTTTTGGTTTCTCCAAAAAGCCCTGTAAGAGATGTATTCATTACTTATAAATCAATGATCATCCTCTTAATTAGTCAACTCTCCCAACGATGTCGATCTTCCTTTATTAGTAAGATTAGCTTGAATCTCTTGGTGGACTCTGATTATTCATATTCATTCTTTTAACTTCAGAATGCAAATTTACATGGCTAATACTTTGTGTATGCAGAACGAGATCCCACTTCTGAACAATGCATTATTTTTAATAACTTTACAGATAGCAAAAGATGCAAAGTTACAAAAAGTTCCTGGCAAAGGTATGTTGGTACAAGATCCACGGACCCCAAAGTCGGGAGGAGCGGCTGCTTCTGCTTTAAAGCTAAGAAGGGAAGAAGGCAAGGCAAAAATTCAAGAACGAACTCGAACAGCTATACAGGTAATTAAATACTGCCTGGTTTTTCACTTTAGTACACAGCACATGGATCTCCACATACTTAATTAG

mRNA sequence

ATGGAGGGAAACCAGCAAACAGAGATGGGAAAACCAGCTGAGAGAAAGGGGAGAGGGAAACCACCGACCTCCGACGACCACCGTCAAAGCTTCAGCCGGCTGTTCATAGCTTCGTTTAGCTTCGTTTACGAAAGTCAGTGTGATCCATTTTCCGTTTCAGCTCCCTCACTCACGGTAATCGTTCAGGCTTATGGAGAAGTGTTTGATCGTGCTTGCAACTTTGCTTCTGGGCTTCGTACACGATCTGCTGGTTACTTCAAGAACCCAGAAAAGACTAACAAGGTCTACAAGGCCGAGGCAGCCCTACTGTCGAGAAAGTACGTGGATAATGTTATTATGGTATATGCATATCCCTTTCACAATTATTGTGTACCTCTTGTTGTCACTTTGCGTCCAGCCCTTGAGAAGTGGGCCAAAGAAGCTGGCATCAATTATGGGGACTTTTCTCAGCTATGTGAAAATGGTGAAACCATTAGTGAGTTTTCAAGAATGCAAATTTACATGGCTAATACTTTGTGTATGCAGAACGAGATCCCACTTCTGAACAATGCATTATTTTTAATAACTTTACAGATAGCAAAAGATGCAAAGTTACAAAAAGTTCCTGGCAAAGGTATGTTGGTACAAGATCCACGGACCCCAAAGTCGGGAGGAGCGGCTGCTTCTGCTTTAAAGCTAAGAAGGGAAGAAGGCAAGGCAAAAATTCAAGAACGAACTCGAACAGCTATACAGGTAATTAAATACTGCCTGGTTTTTCACTTTAGTACACAGCACATGGATCTCCACATACTTAATTAG

Coding sequence (CDS)

ATGGAGGGAAACCAGCAAACAGAGATGGGAAAACCAGCTGAGAGAAAGGGGAGAGGGAAACCACCGACCTCCGACGACCACCGTCAAAGCTTCAGCCGGCTGTTCATAGCTTCGTTTAGCTTCGTTTACGAAAGTCAGTGTGATCCATTTTCCGTTTCAGCTCCCTCACTCACGGTAATCGTTCAGGCTTATGGAGAAGTGTTTGATCGTGCTTGCAACTTTGCTTCTGGGCTTCGTACACGATCTGCTGGTTACTTCAAGAACCCAGAAAAGACTAACAAGGTCTACAAGGCCGAGGCAGCCCTACTGTCGAGAAAGTACGTGGATAATGTTATTATGGTATATGCATATCCCTTTCACAATTATTGTGTACCTCTTGTTGTCACTTTGCGTCCAGCCCTTGAGAAGTGGGCCAAAGAAGCTGGCATCAATTATGGGGACTTTTCTCAGCTATGTGAAAATGGTGAAACCATTAGTGAGTTTTCAAGAATGCAAATTTACATGGCTAATACTTTGTGTATGCAGAACGAGATCCCACTTCTGAACAATGCATTATTTTTAATAACTTTACAGATAGCAAAAGATGCAAAGTTACAAAAAGTTCCTGGCAAAGGTATGTTGGTACAAGATCCACGGACCCCAAAGTCGGGAGGAGCGGCTGCTTCTGCTTTAAAGCTAAGAAGGGAAGAAGGCAAGGCAAAAATTCAAGAACGAACTCGAACAGCTATACAGGTAATTAAATACTGCCTGGTTTTTCACTTTAGTACACAGCACATGGATCTCCACATACTTAATTAG

Protein sequence

MEGNQQTEMGKPAERKGRGKPPTSDDHRQSFSRLFIASFSFVYESQCDPFSVSAPSLTVIVQAYGEVFDRACNFASGLRTRSAGYFKNPEKTNKVYKAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGETISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQKVPGKGMLVQDPRTPKSGGAAASALKLRREEGKAKIQERTRTAIQVIKYCLVFHFSTQHMDLHILN

Homology

[Close]

BLAST of CmaCh19G008420 vs. ExPASy Swiss-Prot
Match: Q9SJD4 (Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana OX=3702 GN=LACS8 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.2e-18
Identity = 68/203 (33.50%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYF N EKT++VY                                             
Sbjct: 537 TAGYFNNQEKTDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLG 596

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           K EAAL S  YVDN IMV+A P ++YCV LVV  R ALEKWA+EAG+ + +F++LCE GE
Sbjct: 597 KVEAALGSSNYVDN-IMVHADPINSYCVALVVPSRGALEKWAEEAGVKHSEFAELCEKGE 656

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 238
            + E  +                           +  K AKL+K  +P K  L+ +P TP
Sbjct: 657 AVKEVQQS------------------------LTKAGKAAKLEKFELPAKIKLLSEPWTP 713

[Close]

BLAST of CmaCh19G008420 vs. ExPASy Swiss-Prot
Match: Q9CAP8 (Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LACS9 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.2e-10
Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 97  KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 156
           K EAAL    YV+N IMV+A  F++YCV LVV  +  +E WA + GI++ +F +LC   +
Sbjct: 568 KVEAALSISPYVEN-IMVHADSFYSYCVALVVASQHTVEGWASKQGIDFANFEELCTKEQ 627

Query: 157 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 216
            + E                        ++   ++ AK ++L+K  +P K  L+  P TP
Sbjct: 628 AVKE------------------------VYASLVKAAKQSRLEKFEIPAKIKLLASPWTP 684

Query: 217 KSGGAAASALKLRREEGKAKIQE 238
           +S G   +ALKL+R+  + +  E
Sbjct: 688 ES-GLVTAALKLKRDVIRREFSE 684

[Close]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL
Match: A0A6J1JFI0 (long chain acyl-CoA synthetase 8 OS=Cucurbita maxima OX=3661 GN=LOC111486423 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 1.7e-31
Identity = 97/202 (48.02%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            ISE  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IISEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL
Match: A0A6J1EJQ5 (long chain acyl-CoA synthetase 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111435215 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-31
Identity = 96/202 (47.52%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            I E  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IIGEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL
Match: A0A6J1ERJ0 (long chain acyl-CoA synthetase 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111435215 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 5.1e-31
Identity = 96/202 (47.52%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            I E  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IIGEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL
Match: A0A1S3CGI4 (long chain acyl-CoA synthetase 8 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500501 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 92/204 (45.10%), Postives = 110/204 (53.92%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           + GYFKNPEKTN+VY                                             
Sbjct: 549 AVGYFKNPEKTNEVYKDDEKGTRWFYTGDIGAFHPDGCLEIIDRKKDIVKLQHGEYISLG 608

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV +VV LRPALE+WAKEAGINYG+FSQLCENGE
Sbjct: 609 KAEAALLSSKYVDNV-MVYADPFHNYCVAVVVPLRPALEEWAKEAGINYGEFSQLCENGE 668

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 239
           +ISE  R                           ++ KDAKLQK  +P K +L  DP TP
Sbjct: 669 SISEVQRS------------------------LSKVGKDAKLQKFEIPEKIILAPDPWTP 726

[Close]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL
Match: A0A5A7UTI1 (Long chain acyl-CoA synthetase 8 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001400 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-30
Identity = 92/204 (45.10%), Postives = 110/204 (53.92%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           + GYFKNPEKTN+VY                                             
Sbjct: 575 AVGYFKNPEKTNEVYKDDEKGTRWFYTGDIGAFHPDGCLEIIDRKKDIVKLQHGEYISLG 634

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV +VV LRPALE+WAKEAGINYG+FSQLCENGE
Sbjct: 635 KAEAALLSSKYVDNV-MVYADPFHNYCVAVVVPLRPALEEWAKEAGINYGEFSQLCENGE 694

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 239
           +ISE  R                           ++ KDAKLQK  +P K +L  DP TP
Sbjct: 695 SISEVQRS------------------------LSKVGKDAKLQKFEIPEKIILAPDPWTP 752

[Close]

BLAST of CmaCh19G008420 vs. NCBI nr
Match: XP_022989326.1 (long chain acyl-CoA synthetase 8 [Cucurbita maxima] >XP_022989327.1 long chain acyl-CoA synthetase 8 [Cucurbita maxima] >XP_022989328.1 long chain acyl-CoA synthetase 8 [Cucurbita maxima])

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-31
Identity = 97/202 (48.02%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            ISE  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IISEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. NCBI nr
Match: KAG7022793.1 (Long chain acyl-CoA synthetase 8, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-31
Identity = 97/202 (48.02%), Postives = 108/202 (53.47%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 544 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 603

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 604 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 663

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            ISE  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 664 IISEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 719

[Close]

BLAST of CmaCh19G008420 vs. NCBI nr
Match: XP_022928377.1 (long chain acyl-CoA synthetase 8 isoform X2 [Cucurbita moschata] >XP_022928378.1 long chain acyl-CoA synthetase 8 isoform X2 [Cucurbita moschata])

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-30
Identity = 96/202 (47.52%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            I E  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IIGEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. NCBI nr
Match: XP_022928374.1 (long chain acyl-CoA synthetase 8 isoform X1 [Cucurbita moschata] >XP_022928375.1 long chain acyl-CoA synthetase 8 isoform X1 [Cucurbita moschata] >XP_022928376.1 long chain acyl-CoA synthetase 8 isoform X1 [Cucurbita moschata])

HSP 1 Score: 144.8 bits (364), Expect = 1.0e-30
Identity = 96/202 (47.52%), Postives = 107/202 (52.97%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYFKNPEKTN+VY                                             
Sbjct: 545 TAGYFKNPEKTNEVYKDDEKGMRWFYTGDIGTFHPDGCLEIIDRKKDIVKLQHGEYVSLG 604

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           KAEAALLS KYVDNV MVYA PFHNYCV LVV LRPALEKWAKEAGINYGDF QLCENGE
Sbjct: 605 KAEAALLSSKYVDNV-MVYADPFHNYCVALVVPLRPALEKWAKEAGINYGDFVQLCENGE 664

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 237
            I E  R                           ++AKDAKLQK  +P K  LV DP TP
Sbjct: 665 IIGEVQRS------------------------LSKVAKDAKLQKFEIPEKIKLVADPWTP 720

[Close]

BLAST of CmaCh19G008420 vs. NCBI nr
Match: KAG7011852.1 (hypothetical protein SDJN02_26758 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-30
Identity = 78/117 (66.67%), Postives = 87/117 (74.36%), Query Frame = 0


Query: 161 FSRMQIYMANTLCMQNEIPLLNNALFLI------------TLQIAKDAKLQKVPGKGMLV 220
           F R   + +   C + +I ++NN L L              + IAKDAKLQKVPGK MLV
Sbjct: 11  FDRASNFASGLGCFRQDITVVNNMLLLAEAALLSSKYVDNVIVIAKDAKLQKVPGKVMLV 70

Query: 221 QDPRTPKSGGAAASALKLRREEGKAKIQERTRTAIQVIKYCLVFHFSTQHMDLHILN 266
           QDPRTPKSGGAAASALKL RE+GKAKIQERTRTAIQVIKYCLVFHFSTQHMDLH+LN
Sbjct: 71  QDPRTPKSGGAAASALKLIREQGKAKIQERTRTAIQVIKYCLVFHFSTQHMDLHVLN 127

[Close]

BLAST of CmaCh19G008420 vs. TAIR 10
Match: AT2G04350.1 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 68/203 (33.50%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYF N EKT++VY                                             
Sbjct: 537 TAGYFNNQEKTDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLG 596

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           K EAAL S  YVDN IMV+A P ++YCV LVV  R ALEKWA+EAG+ + +F++LCE GE
Sbjct: 597 KVEAALGSSNYVDN-IMVHADPINSYCVALVVPSRGALEKWAEEAGVKHSEFAELCEKGE 656

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 238
            + E  +                           +  K AKL+K  +P K  L+ +P TP
Sbjct: 657 AVKEVQQS------------------------LTKAGKAAKLEKFELPAKIKLLSEPWTP 713

[Close]

BLAST of CmaCh19G008420 vs. TAIR 10
Match: AT2G04350.2 (AMP-dependent synthetase and ligase family protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.4e-19
Identity = 68/203 (33.50%), Postives = 95/203 (46.80%), Query Frame = 0


Query: 82  SAGYFKNPEKTNKVY--------------------------------------------- 141
           +AGYF N EKT++VY                                             
Sbjct: 537 TAGYFNNQEKTDEVYKVDEKGTRWFYTGDIGRFHPDGCLEVIDRKKDIVKLQHGEYVSLG 596

Query: 142 KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 201
           K EAAL S  YVDN IMV+A P ++YCV LVV  R ALEKWA+EAG+ + +F++LCE GE
Sbjct: 597 KVEAALGSSNYVDN-IMVHADPINSYCVALVVPSRGALEKWAEEAGVKHSEFAELCEKGE 656

Query: 202 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 238
            + E  +                           +  K AKL+K  +P K  L+ +P TP
Sbjct: 657 AVKEVQQS------------------------LTKAGKAAKLEKFELPAKIKLLSEPWTP 713

[Close]

BLAST of CmaCh19G008420 vs. TAIR 10
Match: AT1G77590.1 (long chain acyl-CoA synthetase 9 )

HSP 1 Score: 68.6 bits (166), Expect = 8.9e-12
Identity = 46/143 (32.17%), Postives = 74/143 (51.75%), Query Frame = 0


Query: 97  KAEAALLSRKYVDNVIMVYAYPFHNYCVPLVVTLRPALEKWAKEAGINYGDFSQLCENGE 156
           K EAAL    YV+N IMV+A  F++YCV LVV  +  +E WA + GI++ +F +LC   +
Sbjct: 568 KVEAALSISPYVEN-IMVHADSFYSYCVALVVASQHTVEGWASKQGIDFANFEELCTKEQ 627

Query: 157 TISEFSRMQIYMANTLCMQNEIPLLNNALFLITLQIAKDAKLQK--VPGKGMLVQDPRTP 216
            + E                        ++   ++ AK ++L+K  +P K  L+  P TP
Sbjct: 628 AVKE------------------------VYASLVKAAKQSRLEKFEIPAKIKLLASPWTP 684

Query: 217 KSGGAAASALKLRREEGKAKIQE 238
           +S G   +ALKL+R+  + +  E
Sbjct: 688 ES-GLVTAALKLKRDVIRREFSE 684

The following BLAST results are available for this feature:

BLAST of CmaCh19G008420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJD4	6.2e-18	33.50	Long chain acyl-CoA synthetase 8 OS=Arabidopsis thaliana OX=3702 GN=LACS8 PE=1 S...	[more]
Q9CAP8	1.2e-10	32.17	Long chain acyl-CoA synthetase 9, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CmaCh19G008420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFI0	1.7e-31	48.02	long chain acyl-CoA synthetase 8 OS=Cucurbita maxima OX=3661 GN=LOC111486423 PE=...	[more]
A0A6J1EJQ5	5.1e-31	47.52	long chain acyl-CoA synthetase 8 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1ERJ0	5.1e-31	47.52	long chain acyl-CoA synthetase 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A1S3CGI4	2.5e-30	45.10	long chain acyl-CoA synthetase 8 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500...	[more]
A0A5A7UTI1	2.5e-30	45.10	Long chain acyl-CoA synthetase 8 isoform X1 OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of CmaCh19G008420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022989326.1	3.6e-31	48.02	long chain acyl-CoA synthetase 8 [Cucurbita maxima] >XP_022989327.1 long chain a...	[more]
KAG7022793.1	3.6e-31	48.02	Long chain acyl-CoA synthetase 8, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022928377.1	1.0e-30	47.52	long chain acyl-CoA synthetase 8 isoform X2 [Cucurbita moschata] >XP_022928378.1...	[more]
XP_022928374.1	1.0e-30	47.52	long chain acyl-CoA synthetase 8 isoform X1 [Cucurbita moschata] >XP_022928375.1...	[more]
KAG7011852.1	4.0e-30	66.67	hypothetical protein SDJN02_26758 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh19G008420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G04350.1	4.4e-19	33.50	AMP-dependent synthetase and ligase family protein	[more]
AT2G04350.2	4.4e-19	33.50	AMP-dependent synthetase and ligase family protein	[more]
AT1G77590.1	8.9e-12	32.17	long chain acyl-CoA synthetase 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..27
None	No IPR available	PANTHER	PTHR43272:SF47	LONG CHAIN ACYL-COA SYNTHETASE 8-LIKE	coord: 96..163
None	No IPR available	PANTHER	PTHR43272	LONG-CHAIN-FATTY-ACID--COA LIGASE	coord: 96..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G008420.1	CmaCh19G008420.1	mRNA