CmaCh19G007700 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGATCATTCATAATCAGATATGTAACTAAAGTCGGTAACAATACTCGATAGGTGACGATTACATCCTTTTGCAGGTTACTACAATTCATAGTATAAAAAACTTTAAAAAAAGAAAGAAAAGTTCGTCACGTTACAAGCTGTGGTTAGACAATGAGATAAGCGCGAGTAGAATATATGGACTGATATTTGTATGGGTAACTTATGATGCCTTGTCGGCATTGGCCAAGTGTGCATGAACGATTAGTTGGCAGCTTTAATGGTTAATTAATAGGTGACGTGTGACATATGAGGAGGCACATCAGCCGGAGGGACACGTCAACATTCCTGCACTCCCATGGAAAAACATCCATTCCCCACTTGGCACACGCGCTTTGAAGCGCGTGAGTCTCCATCTAACCCTCTGTTTCTTATTCAACAAAAACAGAGACTCATCCTCTGTTTCTTGTTCCTAACGATGCACGCCAGATCCTACTCGGAGGCGACGAGCGTTGACCAGTTCTCGCCGGCGCGGCGATTCTACTACGTACAGAGCCCCTCGTCCAACGAAGTGGAAAAAATGTCGTACGTTTCGAGCCCAATGGGTTCGCCGCCGCACCATTTTTACCATTCTCGTGAGTCGTCGAGTTCCCGATTCTCCGCCGCGTTTAAGAACAACATCAACCGGAACGGCAATCCCTCTGCCTGGAGAAAACTCCACCGCCCCCAGGATCCCAATGAAGAAGAGGAGGAATCCGGTGATCGGAATCCCAAATGGAATCGGAATCTCCGGCTGTACTTGTCTCTGTTTCTTCTGTTGTTTCTTCTTTTCACCGTCTTCTTCCTCATCCTCTGGGGCGCTACCAAGTCCTTCCGCCCTCAAATTCTTATTCAGGTAATACCCATTTATTTATTTTCGTTACGAATCACGACTCTCAACAATAATTTGATATTGTCCATTTTGAATATAAGCTCTATTGGCTTTGCTCTTTGCTTTTTACAAGGTGTCATAAACCCACTTCAACCGTCTTTCCTTAGTTCATCAGCTTCTAAAACTATTCTCGTTTGATTTATCACTTAAAAAGTTCATAACTTACATAATCAATCATTAACAAATAACGGGTTGGCAACCAAATTGAGTAGAGTTGCACATTTTGTTTCGAAATGCTTGAAAACTAATCGAATAGTTATGAAAGAAGAAAGATGATCGTGTGTACTTTTTCTTTATTCGTTCGAGTTAATGAATGTATGAAATAAAGATAAAACCTTCTATCTGAACTGACATTCAAGTACGTACCTGATTGAGTTCGATATGTATAATTTAATCGATTAAGACATAAGTTTTCAATCTTATTGTTATTATTAATAAAATACAAAAACTGAAAAGGAGGAATTTTTTTTAAAAGCATAATGGCATTTTTGTAAATTTTCAGAGTATGGTGTTCGAGAAGTTTAACGTTCAGGCAGGAAGTGATCCGGGGGGCGTGGCAACGGATCTGATGTCATTAAATTCAACGGTGAGGATCAAGTACAGAAATCCTGCCACGTTTTACGGAGTCCACGTCAGCTCCTCACTATTTCAGCTCCACTATTTCCAGCTCCATGTAGCCTCTGGCCAGGTTCAAATCTTAATTACGCTCTAATTTATTTATTTATTTATTTATTTAAAAAATGGCCTATTAATTATAAAATTAATTAATGAACTTCTTTATTTATTTTGATTTGGGAGGGTTCGAGAGGTACGTGTGAAATCTAATTATTGTCGTGAGTCTTTGAACTAAATATGAAAACTGATAATCAGATGAAGGAGTTTTACCAAAAAAGACAGAGCTCTCGAAGGTTAACGACATCGGTGGCAGGGCATCAAGTCCCGCTCTACGGTGGGATCACAGTAATTGGGAATTGGCGAGACCAACAACAAGACGGGGTCGGGGTCGAGATGCCGCTAAACCTCACGATGGCTGTGAGGTCGAGAGCTTACATTCTAGGGAAGCTGGTGAAGTCCACATTCCATACAACCATTACATGTTCAGTTACTCTTAGCACCAACAAGCTTGGAAAATTCCACTCTTTCAACAATTCTTGCACTTATAATTGATCTTCTTATGCTCCTTGTGGAGGTTCTTTACAAAATTTGGGTAAGGTTTCATGTCATCGACTATGCAATTTTTGTTGCCTTTTTTGAATTTCTTGTACCACTTTTTTTTTTTTGTCATCTCCCTAGTTTGTATCTAAATTTATATATATATTAAGAACGTGTTATGTTTGT GGATCATTCATAATCAGATATGTAACTAAAGTCGGTAACAATACTCGATAGGTGACGATTACATCCTTTTGCAGGTTACTACAATTCATAGTATAAAAAACTTTAAAAAAAGAAAGAAAAGTTCGTCACGTTACAAGCTGTGGTTAGACAATGAGATAAGCGCGAGTAGAATATATGGACTGATATTTGTATGGGTAACTTATGATGCCTTGTCGGCATTGGCCAAGTGTGCATGAACGATTAGTTGGCAGCTTTAATGGTTAATTAATAGGTGACGTGTGACATATGAGGAGGCACATCAGCCGGAGGGACACGTCAACATTCCTGCACTCCCATGGAAAAACATCCATTCCCCACTTGGCACACGCGCTTTGAAGCGCGTGAGTCTCCATCTAACCCTCTGTTTCTTATTCAACAAAAACAGAGACTCATCCTCTGTTTCTTGTTCCTAACGATGCACGCCAGATCCTACTCGGAGGCGACGAGCGTTGACCAGTTCTCGCCGGCGCGGCGATTCTACTACGTACAGAGCCCCTCGTCCAACGAAGTGGAAAAAATGTCGTACGTTTCGAGCCCAATGGGTTCGCCGCCGCACCATTTTTACCATTCTCGTGAGTCGTCGAGTTCCCGATTCTCCGCCGCGTTTAAGAACAACATCAACCGGAACGGCAATCCCTCTGCCTGGAGAAAACTCCACCGCCCCCAGGATCCCAATGAAGAAGAGGAGGAATCCGGTGATCGGAATCCCAAATGGAATCGGAATCTCCGGCTGTACTTGTCTCTGTTTCTTCTGTTGTTTCTTCTTTTCACCGTCTTCTTCCTCATCCTCTGGGGCGCTACCAAGTCCTTCCGCCCTCAAATTCTTATTCAGAGTATGGTGTTCGAGAAGTTTAACGTTCAGGCAGGAAGTGATCCGGGGGGCGTGGCAACGGATCTGATGTCATTAAATTCAACGGTGAGGATCAAGTACAGAAATCCTGCCACGTTTTACGGAGTCCACGTCAGCTCCTCACTATTTCAGCTCCACTATTTCCAGCTCCATGTAGCCTCTGGCCAGATGAAGGAGTTTTACCAAAAAAGACAGAGCTCTCGAAGGTTAACGACATCGGTGGCAGGGCATCAAGTCCCGCTCTACGGTGGGATCACAGTAATTGGGAATTGGCGAGACCAACAACAAGACGGGGTCGGGGTCGAGATGCCGCTAAACCTCACGATGGCTGTGAGGTCGAGAGCTTACATTCTAGGGAAGCTGGTGAAGTCCACATTCCATACAACCATTACATGTTCAGTTACTCTTAGCACCAACAAGCTTGGAAAATTCCACTCTTTCAACAATTCTTGCACTTATAATTGATCTTCTTATGCTCCTTGTGGAGGTTCTTTACAAAATTTGGGTAAGGTTTCATGTCATCGACTATGCAATTTTTGTTGCCTTTTTTGAATTTCTTGTACCACTTTTTTTTTTTTGTCATCTCCCTAGTTTGTATCTAAATTTATATATATATTAAGAACGTGTTATGTTTGT ATGGAAAAACATCCATTCCCCACTTGGCACACGCGCTTTGAAGCGCGTGAGTCTCCATCTAACCCTCTGTTTCTTATTCAACAAAAACAGAGACTCATCCTCTGTTTCTTGTTCCTAACGATGCACGCCAGATCCTACTCGGAGGCGACGAGCGTTGACCAGTTCTCGCCGGCGCGGCGATTCTACTACGTACAGAGCCCCTCGTCCAACGAAGTGGAAAAAATGTCGTACGTTTCGAGCCCAATGGGTTCGCCGCCGCACCATTTTTACCATTCTCGTGAGTCGTCGAGTTCCCGATTCTCCGCCGCGTTTAAGAACAACATCAACCGGAACGGCAATCCCTCTGCCTGGAGAAAACTCCACCGCCCCCAGGATCCCAATGAAGAAGAGGAGGAATCCGGTGATCGGAATCCCAAATGGAATCGGAATCTCCGGCTGTACTTGTCTCTGTTTCTTCTGTTGTTTCTTCTTTTCACCGTCTTCTTCCTCATCCTCTGGGGCGCTACCAAGTCCTTCCGCCCTCAAATTCTTATTCAGAGTATGGTGTTCGAGAAGTTTAACGTTCAGGCAGGAAGTGATCCGGGGGGCGTGGCAACGGATCTGATGTCATTAAATTCAACGGTGAGGATCAAGTACAGAAATCCTGCCACGTTTTACGGAGTCCACGTCAGCTCCTCACTATTTCAGCTCCACTATTTCCAGCTCCATGTAGCCTCTGGCCAGATGAAGGAGTTTTACCAAAAAAGACAGAGCTCTCGAAGGTTAACGACATCGGTGGCAGGGCATCAAGTCCCGCTCTACGGTGGGATCACAGTAATTGGGAATTGGCGAGACCAACAACAAGACGGGGTCGGGGTCGAGATGCCGCTAAACCTCACGATGGCTGTGAGGTCGAGAGCTTACATTCTAGGGAAGCTGGTGAAGTCCACATTCCATACAACCATTACATGTTCAGTTACTCTTAGCACCAACAAGCTTGGAAAATTCCACTCTTTCAACAATTCTTGCACTTATAATTGA MEKHPFPTWHTRFEARESPSNPLFLIQQKQRLILCFLFLTMHARSYSEATSVDQFSPARRFYYVQSPSSNEVEKMSYVSSPMGSPPHHFYHSRESSSSRFSAAFKNNINRNGNPSAWRKLHRPQDPNEEEEESGDRNPKWNRNLRLYLSLFLLLFLLFTVFFLILWGATKSFRPQILIQSMVFEKFNVQAGSDPGGVATDLMSLNSTVRIKYRNPATFYGVHVSSSLFQLHYFQLHVASGQMKEFYQKRQSSRRLTTSVAGHQVPLYGGITVIGNWRDQQQDGVGVEMPLNLTMAVRSRAYILGKLVKSTFHTTITCSVTLSTNKLGKFHSFNNSCTYN Homology
BLAST of CmaCh19G007700 vs. ExPASy TrEMBL
Match: A0A6J1HVK7 (uncharacterized protein LOC111468240 OS=Cucurbita maxima OX=3661 GN=LOC111468240 PE=4 SV=1) HSP 1 Score: 675.6 bits (1742), Expect = 1.1e-190 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of CmaCh19G007700 vs. ExPASy TrEMBL
Match: A0A6J1GK23 (uncharacterized protein LOC111455080 OS=Cucurbita moschata OX=3662 GN=LOC111455080 PE=4 SV=1) HSP 1 Score: 670.2 bits (1728), Expect = 4.4e-189 Identity = 335/339 (98.82%), Postives = 338/339 (99.71%), Query Frame = 0
BLAST of CmaCh19G007700 vs. ExPASy TrEMBL
Match: A0A1S3BJ42 (uncharacterized protein LOC103490245 OS=Cucumis melo OX=3656 GN=LOC103490245 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.8e-126 Identity = 241/315 (76.51%), Postives = 268/315 (85.08%), Query Frame = 0
BLAST of CmaCh19G007700 vs. ExPASy TrEMBL
Match: A0A0A0K4T2 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G018790 PE=4 SV=1) HSP 1 Score: 458.0 bits (1177), Expect = 3.5e-125 Identity = 241/315 (76.51%), Postives = 264/315 (83.81%), Query Frame = 0
BLAST of CmaCh19G007700 vs. ExPASy TrEMBL
Match: A0A6J1JK28 (uncharacterized protein LOC111486495 OS=Cucurbita maxima OX=3661 GN=LOC111486495 PE=4 SV=1) HSP 1 Score: 452.6 bits (1163), Expect = 1.5e-123 Identity = 240/315 (76.19%), Postives = 266/315 (84.44%), Query Frame = 0
BLAST of CmaCh19G007700 vs. NCBI nr
Match: XP_022969162.1 (uncharacterized protein LOC111468240 [Cucurbita maxima]) HSP 1 Score: 675.6 bits (1742), Expect = 2.2e-190 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 0
BLAST of CmaCh19G007700 vs. NCBI nr
Match: XP_022952376.1 (uncharacterized protein LOC111455080 [Cucurbita moschata]) HSP 1 Score: 670.2 bits (1728), Expect = 9.2e-189 Identity = 335/339 (98.82%), Postives = 338/339 (99.71%), Query Frame = 0
BLAST of CmaCh19G007700 vs. NCBI nr
Match: XP_023511401.1 (uncharacterized protein LOC111776236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 577.4 bits (1487), Expect = 8.1e-161 Identity = 294/301 (97.67%), Postives = 296/301 (98.34%), Query Frame = 0
BLAST of CmaCh19G007700 vs. NCBI nr
Match: KAG7011795.1 (hypothetical protein SDJN02_26701, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 536.2 bits (1380), Expect = 2.1e-148 Identity = 276/299 (92.31%), Postives = 281/299 (93.98%), Query Frame = 0
BLAST of CmaCh19G007700 vs. NCBI nr
Match: XP_038888376.1 (uncharacterized protein LOC120078225 [Benincasa hispida]) HSP 1 Score: 468.8 bits (1205), Expect = 4.0e-128 Identity = 243/312 (77.88%), Postives = 270/312 (86.54%), Query Frame = 0
BLAST of CmaCh19G007700 vs. TAIR 10
Match: AT2G41990.1 (CONTAINS InterPro DOMAIN/s: Late embryogenesis abundant protein, group 2 (InterPro:IPR004864); BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family (TAIR:AT4G35170.1); Has 172 Blast hits to 168 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 221.1 bits (562), Expect = 1.4e-57 Identity = 141/311 (45.34%), Postives = 194/311 (62.38%), Query Frame = 0
BLAST of CmaCh19G007700 vs. TAIR 10
Match: AT4G35170.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family ) HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51 Identity = 127/287 (44.25%), Postives = 172/287 (59.93%), Query Frame = 0
BLAST of CmaCh19G007700 vs. TAIR 10
Match: AT1G45688.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast hits to 242 proteins in 39 species: Archae - 0; Bacteria - 11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17; Other Eukaryotes - 8 (source: NCBI BLink). ) HSP 1 Score: 186.8 bits (473), Expect = 2.9e-47 Identity = 136/340 (40.00%), Postives = 192/340 (56.47%), Query Frame = 0
BLAST of CmaCh19G007700 vs. TAIR 10
Match: AT5G42860.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G45688.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 172.2 bits (435), Expect = 7.3e-43 Identity = 130/330 (39.39%), Postives = 183/330 (55.45%), Query Frame = 0
BLAST of CmaCh19G007700 vs. TAIR 10
Match: AT1G45688.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 134.4 bits (337), Expect = 1.7e-31 Identity = 101/234 (43.16%), Postives = 138/234 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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