CmaCh19G006370 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTACGACGACGTGGAGATTGAAGACATGGAGTGGAATGAGGAACTGCAGGCCTTCACGTACCCATGCCCTTGCGGCGACTTGTTCCAGATTACGAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGGTGCCCTAGCTGTTCTCTTTACATCACAGTTATCTACAACATGGAAGATTTTCTCGGAGACTCTGATCACAAGAATAACAAAGGACTTCAGCCCTCCAAGCAACAGCCTATCGTTGTCGCTTGA ATGTCGTACGACGACGTGGAGATTGAAGACATGGAGTGGAATGAGGAACTGCAGGCCTTCACGTACCCATGCCCTTGCGGCGACTTGTTCCAGATTACGAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGGTGCCCTAGCTGTTCTCTTTACATCACAGTTATCTACAACATGGAAGATTTTCTCGGAGACTCTGATCACAAGAATAACAAAGGACTTCAGCCCTCCAAGCAACAGCCTATCGTTGTCGCTTGA ATGTCGTACGACGACGTGGAGATTGAAGACATGGAGTGGAATGAGGAACTGCAGGCCTTCACGTACCCATGCCCTTGCGGCGACTTGTTCCAGATTACGAAGGAGGATCTTAAGCTCGGTGAAGAGATTGCTCGGTGCCCTAGCTGTTCTCTTTACATCACAGTTATCTACAACATGGAAGATTTTCTCGGAGACTCTGATCACAAGAATAACAAAGGACTTCAGCCCTCCAAGCAACAGCCTATCGTTGTCGCTTGA MSYDDVEIEDMEWNEELQAFTYPCPCGDLFQITKEDLKLGEEIARCPSCSLYITVIYNMEDFLGDSDHKNNKGLQPSKQQPIVVA Homology
BLAST of CmaCh19G006370 vs. ExPASy Swiss-Prot
Match: Q9VGQ9 (DPH3 homolog OS=Drosophila melanogaster OX=7227 GN=CG14701 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 5.8e-18 Identity = 39/68 (57.35%), Postives = 52/68 (76.47%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy Swiss-Prot
Match: Q21102 (DPH3 homolog OS=Caenorhabditis elegans OX=6239 GN=K01H12.1 PE=3 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.7e-17 Identity = 36/61 (59.02%), Postives = 50/61 (81.97%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy Swiss-Prot
Match: Q6VUC1 (DPH3 homolog OS=Cricetulus griseus OX=10029 GN=DPH3 PE=3 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.9e-17 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy Swiss-Prot
Match: Q96FX2 (DPH3 homolog OS=Homo sapiens OX=9606 GN=DPH3 PE=1 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.7e-17 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy Swiss-Prot
Match: Q4R312 (DPH3 homolog OS=Macaca fascicularis OX=9541 GN=DPH3 PE=3 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 3.7e-17 Identity = 35/61 (57.38%), Postives = 49/61 (80.33%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy TrEMBL
Match: A0A6J1I4L9 (diphthamide biosynthesis protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111470942 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.7e-44 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy TrEMBL
Match: A0A6J1C519 (diphthamide biosynthesis protein 3-like OS=Momordica charantia OX=3673 GN=LOC111007992 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 6.0e-42 Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy TrEMBL
Match: A0A1S3BZL5 (diphthamide biosynthesis protein 3-like OS=Cucumis melo OX=3656 GN=LOC103495198 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40 Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy TrEMBL
Match: A0A5A7SJN1 (Diphthamide biosynthesis protein 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00150 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.5e-40 Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of CmaCh19G006370 vs. ExPASy TrEMBL
Match: A0A6J1EZW6 (diphthamide biosynthesis protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437758 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.3e-40 Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CmaCh19G006370 vs. NCBI nr
Match: XP_022972367.1 (diphthamide biosynthesis protein 3-like [Cucurbita maxima]) HSP 1 Score: 186.8 bits (473), Expect = 7.7e-44 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CmaCh19G006370 vs. NCBI nr
Match: XP_038887330.1 (diphthamide biosynthesis protein 3-like [Benincasa hispida] >XP_038887331.1 diphthamide biosynthesis protein 3-like [Benincasa hispida]) HSP 1 Score: 180.6 bits (457), Expect = 5.5e-42 Identity = 82/85 (96.47%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CmaCh19G006370 vs. NCBI nr
Match: XP_022136247.1 (diphthamide biosynthesis protein 3-like [Momordica charantia]) HSP 1 Score: 179.5 bits (454), Expect = 1.2e-41 Identity = 80/85 (94.12%), Postives = 84/85 (98.82%), Query Frame = 0
BLAST of CmaCh19G006370 vs. NCBI nr
Match: XP_008454889.1 (PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >XP_008454890.1 PREDICTED: diphthamide biosynthesis protein 3-like [Cucumis melo] >KAA0031262.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa] >TYK06714.1 diphthamide biosynthesis protein 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 3.0e-40 Identity = 79/85 (92.94%), Postives = 82/85 (96.47%), Query Frame = 0
BLAST of CmaCh19G006370 vs. NCBI nr
Match: XP_022931585.1 (diphthamide biosynthesis protein 3-like [Cucurbita moschata]) HSP 1 Score: 173.3 bits (438), Expect = 8.8e-40 Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CmaCh19G006370 vs. TAIR 10
Match: AT2G15910.2 (CSL zinc finger domain-containing protein ) HSP 1 Score: 143.7 bits (361), Expect = 7.0e-35 Identity = 66/85 (77.65%), Postives = 73/85 (85.88%), Query Frame = 0
BLAST of CmaCh19G006370 vs. TAIR 10
Match: AT2G15910.1 (CSL zinc finger domain-containing protein ) HSP 1 Score: 139.8 bits (351), Expect = 1.0e-33 Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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