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CmaCh19G004180 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATTTTCAAGGCAACATATTTTTATTTTTTATTTTCCATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTCTCTCTGTCTCTTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAGTAAATAATTATACCTCAAACCCCTTTCTTCCTCTCTATTTCTCTGTTTTTTTTTTTTTTTTTTTTAATTCTATTATTATTATTATTTTTCAGCTCAGAGTTTATTTTTGTTTATACTCTGTTTGGTGGGGGAAAATATTTATATATATATATATGCATCTTTGATTCTGATCTCTTGTTTGGGGATTCGATTCAACTTTTATTTTACTGTGTGCCATCTATTGGGAAAGTGGAATTTTTGTTTCCTTATTCTGTTTGGTGACTGGAAAATATATCATTAATCACTTTGACCCATGATCATTCTCTTCCAATCATTTTTTATTCGAATAAAGTATACTATAAAAACTCCCTCAAATCTATGAAACCTTCAAATAGTCTCTTTAGGGCACAACCCTGAAACCCTATTAAAAGTCACGAATCTATACAATAATATGTTAGTCTCTCTTAAGCATAAACTCTTGTGGCTTTGATTTGGGCTTCTCGAAAAGTCTCTTTCCCTCCCAACCATACGAAAAAGAATTAATCATGTGTTGTTGTTATTGCAGAGGCTCCAGAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGGTATTCATTACATAAACCCGGTTTTGAATGACTATTTTGGTTCCTTAAAAGAGTGAGTTTGTATATGATTTTTGTTCAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAGTAACCTTCTCAAGACCTTGCATCGACCTTTTATTACAGACAAATATATTATATGATTAAAAATATTTAGACTTACCATTTATCTTAAAAATATTTAGACTTACCATTTATCTTAATTATAATATTTGATCATTTATTATTAACAAATATTTTTTACTAAGCTTAACAAATATATCATATTTAACTATTTATTGTTCTTTATTTATTCTTGGCCATTTATTTGATTCTCTAAATGGTTATAAATGGAGAACCTTTACCTCATTTAAATGTGGTGATTTTAGAAAATATTCTCAATTTCCTTACAGTTGAGCTCGTTTTGCAGAGCTCACAAAAAGTTTTCTTCGGTTGTGGCTTGGGAGAATAGCAGAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGTATCAAAACATTCTATTTACACGAACTAAATGTTAGTTTGCTTTGCTTACGACTTCATCTCTAAAAGCTCTCGAGGAATATATATATATATATAAAATGAGAAAGAGAAGTAGAGAAGGGGGACGGAGAGTCCCACCTTTATCTATGTTCACAATATTTAGATAGGATACAGGCTATCCACTAATTCTAATCTTCACCTTTAAACGGAATAGAAGCTACCAACTAACTCCTAAAACACAAAATCTGGCCAGATAAAATATATATATATATTTTCTGGAGTGGTTTTATGTTAGAAGAGTAATTAAACAAAATTTTGAGCAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCAACTCATCAGTTCATGTTCGTGTTCATGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATATGTGTTGTTGTTTATGGTTTGATTTGTTGGTATGATTAGTGAAGATTTGAAAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTTATTTGTTC CAATTTTCAAGGCAACATATTTTTATTTTTTATTTTCCATATCATATCATTCTTCTAAATCTAACAACCCTCCCCTCATCTCTCTCTCTCTCTCTCTGTCTCTTTATATTTGGAAACTCATCCTCATATCTCTCAGATTCCCACTCTCCAATCCCCCATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGAGCAACTCATCAGTTCATGTTCGTGTTCATGTTCGTGTTCATGTCATTTGGGTGTTACTTTAGATATGTGTTGTTGTTTATGGTTTGATTTGTTGGTATGATTAGTGAAGATTTGAAAAGTGCTTGTGAATATGATATTTGGAGGAACATTTGTTTGAATGTAAATCAATATTGTTATAGTCATTCTAATTTATTGCAACTCAATCAGATCTGAAATTTATTTGTTC ATGGCTGACCAATCAACCCCGCCCTCCGATCCTCCGCCGCAGGAGCTCCCCAAAGACGTCGCTGAAGAGAAAACCGTAATTCCACCACCGCCCTCATCGGCACCAGTACCTGCGCCCACACCTGCTGAACACAAAACCGATGACTCCAAAGCTCTTGTTCTTGTTGAAAAAGCGGGTGAGGCAAAAAGCAGCGAGGGGTCTGTAAACAGAGATGCTGTGCTAGCCAAAGTTGCAACAGAGAAGAGGGTGTCGCTCATAAAAGCTTGGGAAGAAAGTGAAAAGTCAAAGGCTGAGAATAAAAAGGCTTCTGTAGAGGCTGAGTTGAAGAAGATTGAGGAAAATTTGGAGAAGAAGAAGGCAGAGTACATAGAGAAAATGAAGAACAAAATTGCTCTGCTTCACAAAGAAGCAGAGGAGAAGAGGGCGATAATCGAAGCCAAGCGCGGAGAAGAGCTTCTCAAGGCAGAGGAGACGGCTGCAAAGTATCGTGCTACCGGTACTGCCCCGAAGAAGCTTCTCAGCTGCTTCTCGAGCTGA MADQSTPPSDPPPQELPKDVAEEKTVIPPPPSSAPVPAPTPAEHKTDDSKALVLVEKAGEAKSSEGSVNRDAVLAKVATEKRVSLIKAWEESEKSKAENKKASVEAELKKIEENLEKKKAEYIEKMKNKIALLHKEAEEKRAIIEAKRGEELLKAEETAAKYRATGTAPKKLLSCFSS Homology
BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 183.3 bits (464), Expect = 2.3e-45 Identity = 124/188 (65.96%), Postives = 141/188 (75.00%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 176.4 bits (446), Expect = 2.9e-43 Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37 Identity = 107/194 (55.15%), Postives = 128/194 (65.98%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 139.4 bits (350), Expect = 3.9e-32 Identity = 100/189 (52.91%), Postives = 119/189 (62.96%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy Swiss-Prot
Match: Q7XII4 (Remorin 4.1 OS=Oryza sativa subsp. japonica OX=39947 GN=REM4.1 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 2.6e-04 Identity = 57/184 (30.98%), Postives = 87/184 (47.28%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1I6W2 (remorin-like OS=Cucurbita maxima OX=3661 GN=LOC111470544 PE=3 SV=1) HSP 1 Score: 296.2 bits (757), Expect = 9.1e-77 Identity = 178/196 (90.82%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1GJE1 (remorin-like OS=Cucurbita moschata OX=3662 GN=LOC111454820 PE=3 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74 Identity = 177/199 (88.94%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A1S3CPW1 (remorin OS=Cucumis melo OX=3656 GN=LOC103503454 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 2.8e-57 Identity = 149/196 (76.02%), Postives = 156/196 (79.59%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A0A0LKG1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G915100 PE=3 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.1e-56 Identity = 144/193 (74.61%), Postives = 156/193 (80.83%), Query Frame = 0
BLAST of CmaCh19G004180 vs. ExPASy TrEMBL
Match: A0A6J1DYY5 (remorin-like OS=Momordica charantia OX=3673 GN=LOC111025889 PE=3 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 1.2e-55 Identity = 150/197 (76.14%), Postives = 158/197 (80.20%), Query Frame = 0
BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_022971850.1 (remorin-like [Cucurbita maxima]) HSP 1 Score: 296.2 bits (757), Expect = 1.9e-76 Identity = 178/196 (90.82%), Postives = 178/196 (90.82%), Query Frame = 0
BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_022952053.1 (remorin-like [Cucurbita moschata]) HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74 Identity = 177/199 (88.94%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CmaCh19G004180 vs. NCBI nr
Match: KAG7011502.1 (hypothetical protein SDJN02_26408 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.7 bits (735), Expect = 6.7e-74 Identity = 176/199 (88.44%), Postives = 177/199 (88.94%), Query Frame = 0
BLAST of CmaCh19G004180 vs. NCBI nr
Match: KAG6571806.1 (hypothetical protein SDJN03_28534, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 285.8 bits (730), Expect = 2.5e-73 Identity = 175/199 (87.94%), Postives = 175/199 (87.94%), Query Frame = 0
BLAST of CmaCh19G004180 vs. NCBI nr
Match: XP_023554190.1 (remorin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 284.3 bits (726), Expect = 7.4e-73 Identity = 174/199 (87.44%), Postives = 176/199 (88.44%), Query Frame = 0
BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT5G23750.2 (Remorin family protein ) HSP 1 Score: 176.8 bits (447), Expect = 1.6e-44 Identity = 116/186 (62.37%), Postives = 135/186 (72.58%), Query Frame = 0
BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT5G23750.1 (Remorin family protein ) HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44 Identity = 117/187 (62.57%), Postives = 137/187 (73.26%), Query Frame = 0
BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT3G61260.1 (Remorin family protein ) HSP 1 Score: 157.5 bits (397), Expect = 9.8e-39 Identity = 107/194 (55.15%), Postives = 128/194 (65.98%), Query Frame = 0
BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT3G48940.1 (Remorin family protein ) HSP 1 Score: 155.2 bits (391), Expect = 4.8e-38 Identity = 103/172 (59.88%), Postives = 121/172 (70.35%), Query Frame = 0
BLAST of CmaCh19G004180 vs. TAIR 10
Match: AT2G45820.1 (Remorin family protein ) HSP 1 Score: 139.4 bits (350), Expect = 2.7e-33 Identity = 100/189 (52.91%), Postives = 119/189 (62.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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