CmaCh19G003010 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G003010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	RHOMBOID-like protein 10, chloroplastic
Location	Cma_Chr19: 2429796 .. 2437167 (+)
RNA-Seq Expression	CmaCh19G003010
Synteny	CmaCh19G003010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAGCAGCACCGTGAAGAATGGTGGGAAGTTCCGGTGCCGGACCGTTGGGCTTCCCTTTGTTCCTTGAACCCACGGCCGGCCCTCTTGATCTCTTCGCGACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGCCGTATTATTCATCACATTACCCTCACCTTCGCTCTCCATTCGTTCGATAAGGTTCTCTCTCTTTTCTCTCTACTTTTTAATTTTCAGCTTCTATATCCAATAGCTCAATTGTGATGATTCGAATTTTGATCTTCTGCCATTTATTTGTGCAATCGTTTCGGGATTCGAATTTTGTATGGTTTGAACTGTTATACTGTTAACTGTTGAGAGAGGCGATCTTATCGGCATACTTTGAAATCTGTTTCGTGGATGATGCAAATTTCTCGGATTTTGTTTCTCTCTATATGTTGACCTTGCTTGTGGCTAGCTGTGTTCCATAAGCCAGTGGTTTACATGAATGTGGATAAAAAGTTTGGAGGATTAATGCCATGTAAAAGTTTGGAGGATCATTTGCTGCAATTGTTCTTCTTATTATTATTTTGATAGAACACAAAAGTTTGTATTAGTTGTGATCTTTTAACCCCCCTATGAGCCATCTCCAGGCATTCAATTGTTGTTCTATACGTTGGTTCGAAGTAAACTAAGGGCCTTAAAAGCGTTCCACTGAATGATCTTAGTTTTTGCCTCCCTTTGAGAACACTTAGAACCTTATGAAAGATACCAAGAATGTCATGGGCAAGCCAAGAAAGGGTGGAATCTTGGATAGAAAATTTCATCTGGTGTAAGCTGAAGGGGAGTGCATAAGCAAGTGATCCACGTGTTTCATAGTAAAGTTGGGGTGATGAGAGATATTGGAGGACCTATTTACAGTTTACGGTGTAATCAATGTTTAAAAGGCTAGAGGCAACCTTCAGGCTTTTCCTCCTGAAGAAGTTAGGTATAAGCCTTGAAGCAGTTTAAACCTTAAGCCTCGAATTTGATTAAAAATATTTTAAAAAAACTCACTTGGTATGACCTGAGTATTTAAAACATAACAGTCAAATAAAAGTATAAAAAATTACCCCCGACAATTGCCACTTAAAAAAAAATCTGACATCTTTAACATCACTACTATTGTCATTATGTTGTCCCATAACTTTTTTTTTTCAATGCTTTTAATGTTACAATAGGAAAGTAGTAATAATTCAAACTCTCATGGCTCAAACCTTCATATCTTTGAAGAATGAGGCAGTGAGATCTTACATCAATTGGAGGAGGGAACAAAAAGAGGAGAACGGAGCATTCATACAAGGTTGTGGAAATCTCTCCCTAGTAGACGCATTTTAAAACCTTGAGGGGAAGCTCGAAAGGGAAAGTCCAAAGAACACAATATCTAGTGGTGGACTCGGGCGGTTACAAATGGTATAAGAGCCAGACACCGGGTGTGTGCTAGTAAGGATGTTGGGTCCCCAAGGGGGGTGGATTGTAAGATCCCACATCGGTTGGAGAGGGGAACAAAGAATTCCTTACAAGGGTGTGGAAACCTCTCTCTAGTAGACGCATTTTAAAACCTTGAGGGGAACCTTGAAAAGGAAAACCCGAATTGGACAATATCTGCTAGTGTTGGGCTTGGGTTGTTACAGAGGCAAATTAATATTATTCTTCTCATCATTGCACGAGTCATAAGACTTCAAGGTTCAATGGATTTTCATAGAGGCGTAAGCCTCTTATGGTTCAAAGGAGGTTCAAGTAACAAGGTTAAAAGTTTGAGTGTTGCCTCGAGGTGTGCCTAAATGCTTAGCCTCAATAGCATTTTAAAACATTGGGTGCAATTGCAAGGACTGTTGACTAGGATGTTTGGGGAATGTCTATTTAGTAATCCAGAATTTTGTGGAAGGTTGGCAATCTAGCCACTAGTTTGTGTGTTTTGTTGTTGTAATACGGCATGAGAAGTGTTGAAGATAGATATTAGTTATAGTAATGCTATGGAGGTGAGCCTTATATAGTTTAATACATCTCCACGAGCTTTAATAACTTCAGTTTTATTGATGTTTACTTTTCTTGATTTTGAACAGTTTGGGTTTTGCTTGTAGGTAAAGTATTATAGTTCTTTTTCCGTAGTCTGGTATTTAAAAAATGAAAAACGTATTATGCTTTTTTACCCTAGGAGGATCTATGATTTTATGTATTAGTCCTCACATGGGTGCCTCTACCATTTAAATTTGAAATTATGTGGAACAAGGGCACACAACCCAAGCCCACCGCTAATAGATATTATCCTTTTCGGGCTTTCCCTTTTGGACTTCCCCTCAAGGTTTTAAAATACGTCTGGTAGGGAGAGGTTTCCACACTCTTATAAGGAATGCTTCGTTTCCTTCTCTAACCGATGTGGGATCTCACAATCTACCCCCCTTGGGGAACCAGCGTCTTCGCTGGCACAACCTACGATGTCTGACCTAATACCATTTGTAATAGCCCAAGTCTACCGCTAGTAGATATTGTTCTCTTTGGGCTTTTCCTCCAGGTTTTAAAATACCAGAAAATGAATCTGGTAGGGAGATGTTTCTATACCCTTATAAAGAATGGTTCGTTCCCCTCTCCAACTGATGTGGGATCTCACCTTTCCACTTGCCTTGGAATCTTTTTCAGGATATCATCAACTTCAAGGCTAACCGGGACATGATTTTATGGCAAAATTAGAGCTCTTGAAAGTTTATCTTAAGGAGTTGAACAGAAAAATGGTAATTGATTTATTTGTTTGTTTTTATTTCTAAGAAAAGTAGGATACTCTTGTGGAGTTGAAGATATTAGATGACTTTGAAGACATTGCTCTCTTAATGATTTGAGGAATCATAAAAGTTCTCGTAACTGTAAGTGCCTTCTTCAATACATTATCTTCAAAGAGGAAACAATTTGGAGAGAAAAACTTCAATACTCAAAGCAGCTTAGGAAGGTGAGATAAATACATAGGTTTTCTATAGCCTAAAAATGGAACTTGGGATGAATGGCTGCTAACAGAAGCATGTTAGCTTATAATACCTTTGGGATGGTTGTGATTGACCTGCAAACGAGTAATTATGGCATGTACAGCTAGATTGGAGTTTAATAGGTATGTTGATAGTTCTTGCACGTGCCAATGAATTCCTTATACCTAAATACCTCTAGACATATACAATCAGTTTTCCCTCGCAACTCAATTGATGTCCTCTAGTATGCTCTCTGCTGTCCAACCACCTTTCGTCCCAACCTGCAAATGCTTGAAATCTTCAGTTCATGGTTGTTGCTAATCGTCGATTCAAATCAATTCTAGTTGACATTTTTTCAACGTTTCCCCTCACTCTCTTCCTTCTTCTATTGAGACTTGCATTCATTGGAGCTTTTCAGACCACTCACTTCCCCTTCTCCCCCCTTGCCCTTCAATTTTTGTGAAGAACCATTCGCAGAGGAGGATGTGATCTCAAACTTACCTTTGGAAATTTCGGATTTGACTGTTGCCACATGGGTTTTTTGTTTTTCTTCCCCTGATTGTCGGTTCTCATGAATTCCCGCCATCAATCCCTCGATACTTAGATTCAGGAATGCAACATACCTTTGAGCTCATCAATGTCTCTTCCGATACCATCCATCCTCTCTTTTAATTTTTTTGAGCCATTTTTTTCCAATCTCCCCCGGATGAATGCCAATACCAATTTGTTAGGTATCCAAGCACAAAAAATATATCAAAACGATGAAGATTACTATATTGGAATATAATAAAGAATTACAATATCAATAACCTTTCAAGGGGTCTATCTCTCTCCCAAATCCCACAATGGACTCTCGCACCAAAAAAATCCCCTCTTTAAGGTCCCTAACTCTCCTTATTTATAACCAAGTCAACACTAGCTAATTACCCATATGCCCTGCCCTTACTACTATCCTATTAATATTACCAATATCCCTTACTAGTACTCTCACATATTCTTCCTTTGTAATTAACTCTAATGGCTTTTCTTTTGTCTGGTAAACCCCTAATAAACCGTACATTTAAAATTTCTTTATATATCTATGAAAAGCATCTCATTTTAATATATTTAATTTCTTATATTGCTCTGTATTACACAGTGTAATCTTAATTTTTGGTCAACATAGCTTTCCTTCAAATAAATATTTTTGTGCATACAAAGGCCTTATTTGGTTATACTTGGATTAAAATGTTTCTACAAAGCTATTCAATGTGTATTGGCTATTTTAAATAGTTTCTGTAATGATCTTAACACATTTTCTTCAGTTTCTTTTATTTTTTAATTGATGAATCTTGGTTCTGTACTTCTTAACTCCATTTTTTATACTGGTTGAAGCATAATACTACTTTGTGATTAGTAATATTTTATTGTCATGCTCTATTTCTTTTCCGGCAGAAACTTGCTCCTCTTGTTGAAGTCTCTTCTAAATTGAAGAGTGCATGGTGTTCAAGAGTTCTCCATTTTCCAGGATTAAATTTTCTTGAAGTATCTAAGGATATCTTATCATCCACTCATGCTGCTTGTTTATATTTCTTTGGTGGCGGGCATACTGGGAGTAGCTTAAAAAATGAGGGGACATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGGTGTTAATATTTTGTGAGTTTTACAGTTAGTTAGCCATTTTCTCTTTGATACAGCTCCTACGATCATGTCCTCTGATGTATAGCTTTTCTTTTATTCTTCTGATTCCTGTTTATCTTATCTGTTAAACATGTGGTGTGTTTTTTCTGCAGAGCTTTTCTGGCTCAAGTTGCATCAGAAGGAAAGTTACTCCTATGGGGATCCAAGGTGATACTCAGTTTCTGCAGATATCATGTTTGGCATATAATTTTGTGACTGTGTTTGTCAGACGTTTACTGCATGATTCACTTATAATTTGCAGATAAATGCTCTAATAGATCAAGGACAGTTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCGAATATTGGGCATTTGATGGTATATGGTTCTAATACTTTGTGGCATCTGTTGCATTATTTTTGTCTTCTTTAATTACTGGAAATCAACACTTGAAAGTTTTTGTTGCAGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGCACTCGGAGATTTCTTGCAGTGTACTTTGCCTCGGCAATTGCAAGTACAACTCGTAATCTCAATAAAATAGCCATGATATTATTGAATACCTTTTTGACTCGATCATTTCAAGAAAATCAGGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCCTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGTATGACTTTTCATTTGCATACTTGACTTTTGCCAACAAGCATGACAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGATTGTGATAGTAGTTATGGATTTTTTTTCTTATATCAGGATGTTGGGTTTTTTCTTTCTTTTTTACTGTTTTATTTTTTTGTCAATCGAGTTCTTCATTTACGGTCTTCTATAAAGTTCACTCCTGCTGCTTCTCTAAAGGTTTATCTGAACGTGAGAAACTGCAAGCCTTAGCTTCTGCTTTGAAAGTTTTGATTAATTGCATATTTTACTTCCAGAACATACTCTAAGGTGTGGCCTTGAAGTTCCCTACCTGTACAACTTTTAAGTCTGTGGCAAGAATGGGTGACCAGAGAATAGTAGGTGCCTAGTTGATCAAGCAATAAGTCCCATCAGAAAAAAGGCCTTATATGAGAGGCTACATGTCATGTCGAAGGATTAACCTTAAGTTAGAAGATATTTGTGTAATTTATGAGTTAGTATCCAAGCTGAGAATAAATGATATCTATTACTTTGCTTGAGTAGGAGTGTCGAAGGATATTTGTGTAGCAGTTGACCTCGTTATTTGTCTTATTGATTTATTTAGATTTACTTACCTAATGTCTAGGGATTATTATTTAGATTTAGCTACCTAATATCTAGGAATTTATCTAGGAATTTATTTAGACATATGGTTACCTAGTATCTAGGGTATTTAGACACACAATTCTCTAGAAATTAATAAGAAAAACAACAAGCTAATTTAGACTTCCAACACTGCATGTTGCTAGCATTCGTTAGGTCTACCTCTTGACTAGAGCCTATTTTTGTAGTTTCCTTTCATTTTTGTGAGCTTCTTTTGTGTGCACTCTTGTACCTCTTTCATTGATTCTCTATAAAAGCTTTGTTATTCATCAAAAAGAAAAAAAAAAAAAAGTCTCGTCATAGACGGCTATATATAGCTGACATGGGAGAAAAAAAGGCTATAGTTGTTACGTTTAAGTTATTTTGATGAATGGTTGGCTTTTTATTTGTTCCTAAGTATTTTAATTTTTAAACTTCTGATTCAGGTAGGATCCTTTGCTGCATTTGTTGTGAGACATAGAAAACTGGTCGGTAGAGGCAACGAAGATCTGCAGCACATTGCTCATATAATAATCTTAAATATGGTGTGTTTTCCAATTTCCTTTTCTTTTGTCAGATTATTATTATTAATTTTTTTATGGTTTTCAAATTATCATGTTATGGTAAGAATAGTGAAAATAAACTATCACATGGTCGTTCAGAATACTGATCAGTGTACCTGATAAGTTTACTTCTACCATGGGGATCGGTTGGCAACCTTTACGTGAACCTGGAATTGCATCTATAATTACTATTCTGTAACGTTAATCTGTTAGTTTCTATTTAACTTCTTGTGTCTGTTATTAGGAGAATAATTTCCATGATCATTTGGCTTGCAGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATGTAAGTTTGAGAGTAGACAATATTTATTCATTTATTTATTTCTCCATTGAAGACTACTATACTGTTACTGTTTGTCAATAAATGAAAACTTTATTTTTTTTTTTTTTTAGTTAGATGGAATTAGACAATGCCTG

mRNA sequence

TTAGCAGCACCGTGAAGAATGGTGGGAAGTTCCGGTGCCGGACCGTTGGGCTTCCCTTTGTTCCTTGAACCCACGGCCGGCCCTCTTGATCTCTTCGCGACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGCCGTATTATTCATCACATTACCCTCACCTTCGCTCTCCATTCGTTCGATAAGAAACTTGCTCCTCTTGTTGAAGTCTCTTCTAAATTGAAGAGTGCATGGTGTTCAAGAGTTCTCCATTTTCCAGGATTAAATTTTCTTGAAGTATCTAAGGATATCTTATCATCCACTCATGCTGCTTGTTTATATTTCTTTGGTGGCGGGCATACTGGGAGTAGCTTAAAAAATGAGGGGACATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGGTGTTAATATTTTAGCTTTTCTGGCTCAAGTTGCATCAGAAGGAAAGTTACTCCTATGGGGATCCAAGATAAATGCTCTAATAGATCAAGGACAGTTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCGAATATTGGGCATTTGATGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGCACTCGGAGATTTCTTGCAGTGTACTTTGCCTCGGCAATTGCAAGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCCTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGTAGGATCCTTTGCTGCATTTGTTGTGAGACATAGAAAACTGGTCGGTAGAGGCAACGAAGATCTGCAGCACATTGCTCATATAATAATCTTAAATATGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATTTAGATGGAATTAGACAATGCCTG

Coding sequence (CDS)

ATGGTGGGAAGTTCCGGTGCCGGACCGTTGGGCTTCCCTTTGTTCCTTGAACCCACGGCCGGCCCTCTTGATCTCTTCGCGACTGCCACTTCTCTCCGTCTCACCCACTCTCTCCGCCGCCGTATTATTCATCACATTACCCTCACCTTCGCTCTCCATTCGTTCGATAAGAAACTTGCTCCTCTTGTTGAAGTCTCTTCTAAATTGAAGAGTGCATGGTGTTCAAGAGTTCTCCATTTTCCAGGATTAAATTTTCTTGAAGTATCTAAGGATATCTTATCATCCACTCATGCTGCTTGTTTATATTTCTTTGGTGGCGGGCATACTGGGAGTAGCTTAAAAAATGAGGGGACATCTCACTGGAAAACATCAAATAGAAATCCACAAAACGATCGAAGATGGACCAATATTCTTCTTGGTGTTAATATTTTAGCTTTTCTGGCTCAAGTTGCATCAGAAGGAAAGTTACTCCTATGGGGATCCAAGATAAATGCTCTAATAGATCAAGGACAGTTATGGAGGTTGGTCACGTCTTCTTTTTTGCATGCGAATATTGGGCATTTGATGGTTAATTGTTATTCTTTAAATTCTATTGGTCCTGCAGTGGAGAAAATCTCTGGCACTCGGAGATTTCTTGCAGTGTACTTTGCCTCGGCAATTGCAAGTTCATCCATGAGTTATTGGTTCTGCAAGGCACCCTCGGTTGGTGCATCAGGAGCAATCTTTGGATTGGTAGGATCCTTTGCTGCATTTGTTGTGAGACATAGAAAACTGGTCGGTAGAGGCAACGAAGATCTGCAGCACATTGCTCATATAATAATCTTAAATATGGCTATTGGGATAATGTCTAGAGGCATCGATAACTGGGGACATTTAGATGGAATTAGACAATGCCTG

Protein sequence

MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLAPLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSHWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDGIRQCL

Homology

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BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot
Match: F4ICF4 (RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10 PE=2 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 4.0e-74
Identity = 150/279 (53.76%), Postives = 193/279 (69.18%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRIIHHITLTFALHSFDKKLAPLVEVSSKLKSAWCSRVLHFPGLNF 85
           FATA S+   H + R    H+ L F L S  KKL    +  +++K A   RV  F G NF
Sbjct: 24  FATAASVHACHHVSR----HLRLDFHLRSSLKKLQHFSD-DARMKFARYQRVFVFNGANF 83

Query: 86  LEVSKDILSSTHAACLYFFGGGHTGSSLK--NEGTSHWKTSNRNPQNDRRWTNILLGVNI 145
           L+   DI  S  +  + FF GG +  + +   EG+S+ +TS RN  N RRWTN+LL +N+
Sbjct: 84  LKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAINV 143

Query: 146 LAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVE 205
           + ++AQ+AS+GK+L WG+KIN+LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E
Sbjct: 144 IMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAE 203

Query: 206 KISGTRRFLAVYFASAIA-------SSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHR 265
            + G +RFLAVY  SA+A        S+MSYWF KAPSVGASGAIFGLVGS A FV+RH+
Sbjct: 204 SLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRHK 263

Query: 266 KLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDGI 296
           ++V  GNEDL  IA II LNMA+G+MSR IDNWGH+ G+
Sbjct: 264 QMVRGGNEDLMQIAQIIALNMAMGLMSRRIDNWGHIGGL 297

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BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot
Match: P54493 (Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 SV=2)

HSP 1 Score: 108.2 bits (269), Expect = 1.6e-22
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 134 WTNILLGVNILAFLAQVASEGK-----LLLWGSKINALIDQGQLWRLVTSSFLHANIGHL 193
           +T + + + IL F     + G      L+ +G+K N+LI QG+ WRL+T   LH  I HL
Sbjct: 179 FTYLFIALQILMFFLLEINGGSTNTETLVAFGAKENSLIAQGEWWRLLTPIVLHIGIAHL 238

Query: 194 MVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLVGSF 253
             N  +L S+G AVE++ G+ RFL +Y A+ I  S  S+ F   PS GASGAIFG +G+ 
Sbjct: 239 AFNTLALWSVGTAVERMYGSGRFLLIYLAAGITGSIASFVFSPYPSAGASGAIFGCLGAL 298

Query: 254 AAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDGI 296
               + +RK+  R      +I  III+N+  G     IDN GH+ G+
Sbjct: 299 LYVALSNRKMFLRTIG--TNIIVIIIINLGFGFAVSNIDNSGHIGGL 343

[Close]

BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot
Match: Q695U0 (Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 8.8e-13
Identity = 50/166 (30.12%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 134 WTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCY 193
           W   ++ V +   L  + +   L+ +G+    LI QGQ+WRL+   FLHAN  H+  N +
Sbjct: 71  WIFYIVTVCLDTELPLIPAANILVHFGANYPPLIKQGQVWRLLLPVFLHANFFHVFFNVF 130

Query: 194 SLNSIGPAVEKISGTRRFLAVYFASAIASS--SMSYWFCKAPSVGASGAIFGLVG-SFAA 253
               +G  +E+  G  +F  +YFASAI  +  S + +FC +  VGAS A FGL+G     
Sbjct: 131 FQLRMGFTIERRYGLLKFTGLYFASAIYGNLLSATAFFCNSLKVGASTAGFGLIGIQICE 190

Query: 254 FVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRG-IDNWGHLDGI 296
             +   ++  R       ++ ++++ + +  ++ G ID  GHL G+
Sbjct: 191 MALTWHRMRHRDRMLTNMVSFVLLMVLLMFTLNGGSIDQMGHLGGL 236

[Close]

BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot
Match: Q6IUY1 (Rhomboid-like protease 3 OS=Toxoplasma gondii OX=5811 GN=ROM3 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-12
Identity = 58/149 (38.93%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 152 SEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRF 211
           +E  L+L G+         QLWR+VT  FLHA I HL++N   +  I   +E+  GT++F
Sbjct: 63  NERTLMLLGAAYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYGTKKF 122

Query: 212 LAVYFASAIASSSMSYWFCK-APSVGASGAIFGLVGSFAAFV-VRHRKLVGRGNEDLQHI 271
           L  YF SAI  + +S      A SVGAS A FG++G  AA V V   KL    +E+L+ I
Sbjct: 123 LVTYFLSAIVGNLLSMLMQPWALSVGASTAGFGIIGGMAAEVSVVWCKL----SEELKRI 182

Query: 272 AHIIILNMAIGI----MSRGIDNWGHLDG 295
             + I  +A+ I      R +D +GHL G
Sbjct: 183 YSMDICILAVLIYFLSFGRTVDTFGHLGG 207

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BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot
Match: Q9SSR0 (RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.0e-12
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 160 GSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASA 219
           G+    L+++G+ WRL++  +LH    HLM N  SL  IG  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 220 IASSSMSYWFC------KAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHII 279
           +  S +S   C      +  SVGASGA+FGL+G+  + ++ +  +       L  +  II
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILII 213

Query: 280 ILNMAIGIMSRGIDNWGHLDG 295
           +LN+++G + R +DN  H  G
Sbjct: 214 VLNLSVGFLPR-VDNSAHFGG 230

[Close]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL
Match: A0A6J1HX69 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467054 PE=3 SV=1)

HSP 1 Score: 587.0 bits (1512), Expect = 4.4e-164
Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH
Sbjct: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL
Match: A0A6J1HJ61 (RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111464041 PE=3 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 9.4e-159
Identity = 284/294 (96.60%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRI HHI+LTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL+EVSSKLKSAWCSR L FPGLNFLEVSKDILSSTHAACLYFFGGG TGSSLKNE TSH
Sbjct: 61  PLIEVSSKLKSAWCSRALRFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEATSH 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWT ILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTTILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIG+MSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGMMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL
Match: A0A6J1DL86 (RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111022158 PE=3 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.4e-130
Identity = 235/294 (79.93%), Postives = 260/294 (88.44%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MV + GA PLGFPL+LEPT  P+DLFATA SLRL   LRRRI HH+ L+F  +SF KK A
Sbjct: 1   MVANYGATPLGFPLYLEPT--PVDLFATAASLRLGRLLRRRITHHLCLSFTHYSFHKKFA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL ++SSK+K AWC R LHFPGLNFLEVSKDI+SS ++ACL+ FGGG TG+SL+NE  S 
Sbjct: 61  PLNDISSKVKDAWCPRALHFPGLNFLEVSKDIISSNYSACLFLFGGGKTGNSLRNERKSD 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNP N++RWTNILL VNIL +LAQVAS+GKLLLWG+KIN LIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPLNNQRWTNILLAVNILTYLAQVASQGKLLLWGAKINGLIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSS+SYWFC APSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSVSYWFCNAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFA FVVRHRKLVGRG EDL+HIAHII+LNMAIG+MS GIDNWGH+ G
Sbjct: 241 IFGLVGSFAVFVVRHRKLVGRGKEDLRHIAHIILLNMAIGMMSTGIDNWGHVGG 292

[Close]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL
Match: A0A2I4FV26 (RHOMBOID-like protein 10, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=LOC109002280 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 6.6e-96
Identity = 176/278 (63.31%), Postives = 217/278 (78.06%), Query Frame = 0


Query: 18  PTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLAPLVEVSSKLKSAWCSRV 77
           PT+ PL L  TA SL + + LR  + H + L   LHS  +KL+ L  V  +LK  W  + 
Sbjct: 21  PTSRPLSLATTAASLHIGYLLRFHVSHRLELGLLLHSCFQKLSCLDHV-PRLKDVWHEKT 80

Query: 78  LHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSHWKTSNRNPQNDRRWTNI 137
           L F G+NFL++SKD ++ST++ CL FF GG   +  +N+G  H K S++N  + RRWTNI
Sbjct: 81  LQFRGINFLQLSKDAVTSTYSTCLSFFDGGEKRNGFRNDGVPHSKISSKNSFDGRRWTNI 140

Query: 138 LLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNS 197
           LL  N+L F+AQ A++GKLLLWG+KIN+LID GQLWRL TSSFLHANIGHLMVNCYSLNS
Sbjct: 141 LLAANVLVFIAQTATQGKLLLWGAKINSLIDAGQLWRLATSSFLHANIGHLMVNCYSLNS 200

Query: 198 IGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHRK 257
           IGP+ EKISG RRFLAVYFASAIASS+MSYWFCKAP+VGASGAIFGLVG+ A FV+RHR+
Sbjct: 201 IGPSAEKISGPRRFLAVYFASAIASSAMSYWFCKAPAVGASGAIFGLVGTVAVFVMRHRQ 260

Query: 258 LVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDGI 296
           LVG G EDLQHIA +++LNM IG++S+GIDNWGHL G+
Sbjct: 261 LVGGGKEDLQHIARVVVLNMTIGLLSKGIDNWGHLGGL 297

[Close]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL
Match: A0A7N2RCU7 (Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.6e-94
Identity = 180/299 (60.20%), Postives = 220/299 (73.58%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLF-LEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHS----F 60
           MVGS+   PL F +  + P    L+L  TA    + H L+ R+ HH+ L F  HS    F
Sbjct: 1   MVGSAFPQPLWFSVSEVGPAPTSLNLITTAGCFHVGHLLQHRVSHHLRLGFLFHSSSSCF 60

Query: 61  DKKLAPLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKN 120
            KK++ L  V  +LK  WC + L F   NFL++SKD L++T++ C  FF GG T     N
Sbjct: 61  FKKVSRLGHV-PRLKDVWCEKDLQFKEFNFLQLSKDTLTATYSTCSSFFNGGETRKDFGN 120

Query: 121 EGTSHWKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRL 180
           +  SH K S+RN  N RRWTNILL VN+L F+AQ A++G+L+LWG+KIN+LID+GQ WRL
Sbjct: 121 DRASHSKISSRNSFNGRRWTNILLAVNVLIFIAQTATQGQLILWGAKINSLIDKGQFWRL 180

Query: 181 VTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSV 240
           VTSSFLHANIGHLMVNCYSLNS+GP+ E ISG RRFLAVYFASAI+SS MSYWFCKAP+V
Sbjct: 181 VTSSFLHANIGHLMVNCYSLNSLGPSAENISGPRRFLAVYFASAISSSVMSYWFCKAPAV 240

Query: 241 GASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           GASGAIFGL+G+ A F  RHR+LVGRG EDLQHIA +I+LNM IG+ S+GIDNWGHL G
Sbjct: 241 GASGAIFGLIGAVAVFATRHRQLVGRGKEDLQHIAQVIVLNMVIGLFSKGIDNWGHLGG 298

[Close]

BLAST of CmaCh19G003010 vs. NCBI nr
Match: XP_022967604.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita maxima])

HSP 1 Score: 587.0 bits (1512), Expect = 9.0e-164
Identity = 293/294 (99.66%), Postives = 293/294 (99.66%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH
Sbjct: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. NCBI nr
Match: XP_023511751.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.7 bits (1480), Expect = 4.6e-160
Identity = 286/294 (97.28%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRI HHI+LTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL+EV SKLKSAWCSR LHFPGLNFLEVSKDILSSTHAACLYFFGGG TGSSLKNEGTSH
Sbjct: 61  PLIEVPSKLKSAWCSRALHFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEGTSH 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALID+GQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDRGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. NCBI nr
Match: KAG7011445.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 572.8 bits (1475), Expect = 1.8e-159
Identity = 286/294 (97.28%), Postives = 289/294 (98.30%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRI HHI+LTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL+EVSSKLKSAWCSR LHFPGLNFLEVSKDILSSTHAACLYFFGGG TGSSLKNEGTS 
Sbjct: 61  PLIEVSSKLKSAWCSRALHFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEGTSL 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIII+NMAIGIMSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIIVNMAIGIMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. NCBI nr
Match: KAG6571721.1 (RHOMBOID-like protein 10, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 571.2 bits (1471), Expect = 5.1e-159
Identity = 285/294 (96.94%), Postives = 288/294 (97.96%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRI HHI+LTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL+EVSSKLKSAWCSR LHFPGLNFLEVSKDILSSTHA CLYFFGGG TGSSLKNEGTS 
Sbjct: 61  PLIEVSSKLKSAWCSRALHFPGLNFLEVSKDILSSTHAVCLYFFGGGDTGSSLKNEGTSL 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIII+NMAIGIMSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIIVNMAIGIMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. NCBI nr
Match: XP_022963855.1 (RHOMBOID-like protein 10, chloroplastic [Cucurbita moschata])

HSP 1 Score: 569.3 bits (1466), Expect = 1.9e-158
Identity = 284/294 (96.60%), Postives = 287/294 (97.62%), Query Frame = 0


Query: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRIIHHITLTFALHSFDKKLA 60
           MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRI HHI+LTFALHSFDKKLA
Sbjct: 1   MVGSSGAGPLGFPLFLEPTAGPLDLFATATSLRLTHSLRRRITHHISLTFALHSFDKKLA 60

Query: 61  PLVEVSSKLKSAWCSRVLHFPGLNFLEVSKDILSSTHAACLYFFGGGHTGSSLKNEGTSH 120
           PL+EVSSKLKSAWCSR L FPGLNFLEVSKDILSSTHAACLYFFGGG TGSSLKNE TSH
Sbjct: 61  PLIEVSSKLKSAWCSRALRFPGLNFLEVSKDILSSTHAACLYFFGGGDTGSSLKNEATSH 120

Query: 121 WKTSNRNPQNDRRWTNILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180
           WKTSNRNPQNDRRWT ILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF
Sbjct: 121 WKTSNRNPQNDRRWTTILLGVNILAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSF 180

Query: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240
           LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA
Sbjct: 181 LHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGA 240

Query: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDG 295
           IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIG+MSRGIDNWGHL G
Sbjct: 241 IFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHIIILNMAIGMMSRGIDNWGHLGG 294

[Close]

BLAST of CmaCh19G003010 vs. TAIR 10
Match: AT1G25290.2 (RHOMBOID-like protein 10 )

HSP 1 Score: 288.1 bits (736), Expect = 8.0e-78
Identity = 151/272 (55.51%), Postives = 194/272 (71.32%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRIIHHITLTFALHSFDKKLAPLVEVSSKLKSAWCSRVLHFPGLNF 85
           FATA S+   H + R    H+ L F L S  KKL    +  +++K A   RV  F G NF
Sbjct: 24  FATAASVHACHHVSR----HLRLDFHLRSSLKKLQHFSD-DARMKFARYQRVFVFNGANF 83

Query: 86  LEVSKDILSSTHAACLYFFGGGHTGSSLK--NEGTSHWKTSNRNPQNDRRWTNILLGVNI 145
           L+   DI  S  +  + FF GG +  + +   EG+S+ +TS RN  N RRWTN+LL +N+
Sbjct: 84  LKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAINV 143

Query: 146 LAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVE 205
           + ++AQ+AS+GK+L WG+KIN+LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E
Sbjct: 144 IMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAE 203

Query: 206 KISGTRRFLAVYFASAIASSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGN 265
            + G +RFLAVY  SA+ASS+MSYWF KAPSVGASGAIFGLVGS A FV+RH+++V  GN
Sbjct: 204 SLGGPKRFLAVYLTSAVASSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRHKQMVRGGN 263

Query: 266 EDLQHIAHIIILNMAIGIMSRGIDNWGHLDGI 296
           EDL  IA II LNMA+G+MSR IDNWGH+ G+
Sbjct: 264 EDLMQIAQIIALNMAMGLMSRRIDNWGHIGGL 290

[Close]

BLAST of CmaCh19G003010 vs. TAIR 10
Match: AT1G25290.1 (RHOMBOID-like protein 10 )

HSP 1 Score: 279.6 bits (714), Expect = 2.9e-75
Identity = 150/279 (53.76%), Postives = 193/279 (69.18%), Query Frame = 0


Query: 26  FATATSLRLTHSLRRRIIHHITLTFALHSFDKKLAPLVEVSSKLKSAWCSRVLHFPGLNF 85
           FATA S+   H + R    H+ L F L S  KKL    +  +++K A   RV  F G NF
Sbjct: 24  FATAASVHACHHVSR----HLRLDFHLRSSLKKLQHFSD-DARMKFARYQRVFVFNGANF 83

Query: 86  LEVSKDILSSTHAACLYFFGGGHTGSSLK--NEGTSHWKTSNRNPQNDRRWTNILLGVNI 145
           L+   DI  S  +  + FF GG +  + +   EG+S+ +TS RN  N RRWTN+LL +N+
Sbjct: 84  LKSRVDIRLSQSSPFVCFFNGGESRLNPRGGEEGSSNPETSKRNTVNGRRWTNVLLAINV 143

Query: 146 LAFLAQVASEGKLLLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVE 205
           + ++AQ+AS+GK+L WG+KIN+LI++GQLWRL T+S LHAN  HLM+NCYSLNSIGP  E
Sbjct: 144 IMYIAQIASDGKVLTWGAKINSLIERGQLWRLATASVLHANPMHLMINCYSLNSIGPTAE 203

Query: 206 KISGTRRFLAVYFASAIA-------SSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHR 265
            + G +RFLAVY  SA+A        S+MSYWF KAPSVGASGAIFGLVGS A FV+RH+
Sbjct: 204 SLGGPKRFLAVYLTSAVAKPILRVLGSAMSYWFNKAPSVGASGAIFGLVGSVAVFVIRHK 263

Query: 266 KLVGRGNEDLQHIAHIIILNMAIGIMSRGIDNWGHLDGI 296
           ++V  GNEDL  IA II LNMA+G+MSR IDNWGH+ G+
Sbjct: 264 QMVRGGNEDLMQIAQIIALNMAMGLMSRRIDNWGHIGGL 297

[Close]

BLAST of CmaCh19G003010 vs. TAIR 10
Match: AT1G52580.1 (RHOMBOID-like protein 5 )

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 47/141 (33.33%), Postives = 76/141 (53.90%), Query Frame = 0


Query: 160 GSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYFASA 219
           G+    L+++G+ WRL++  +LH    HLM N  SL  IG  +E+  G  R  A+Y  S 
Sbjct: 94  GALERRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISG 153

Query: 220 IASSSMSYWFC------KAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGNEDLQHIAHII 279
           +  S +S   C      +  SVGASGA+FGL+G+  + ++ +  +       L  +  II
Sbjct: 154 LGGSLVS---CLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILII 213

Query: 280 ILNMAIGIMSRGIDNWGHLDG 295
           +LN+++G + R +DN  H  G
Sbjct: 214 VLNLSVGFLPR-VDNSAHFGG 230

[Close]

BLAST of CmaCh19G003010 vs. TAIR 10
Match: AT5G38510.1 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 0


Query: 157 LLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYF 216
           LL+G+KIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 217 ASAIASSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGN-EDLQHIAHIIIL 276
              ++ + MS+     P+VG +G  F L+G++     ++++++     EDL   A II+ 
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKA-IIMT 335

Query: 277 NMAIGIMSRG-IDNWGHLDGI 296
              + +   G ID+W +L  +
Sbjct: 336 GFGLILSHFGPIDDWTNLGAL 355

[Close]

BLAST of CmaCh19G003010 vs. TAIR 10
Match: AT5G38510.2 (Rhomboid-related intramembrane serine protease family protein )

HSP 1 Score: 74.7 bits (182), Expect = 1.4e-13
Identity = 46/141 (32.62%), Postives = 79/141 (56.03%), Query Frame = 0


Query: 157 LLWGSKINALIDQGQLWRLVTSSFLHANIGHLMVNCYSLNSIGPAVEKISGTRRFLAVYF 216
           LL+G+KIN LI  G+ WRLVT  FLH+ I H+ ++ ++L + GP V +  G   F  +Y 
Sbjct: 216 LLYGAKINDLILAGEWWRLVTPMFLHSGIPHVALSSWALLTFGPKVCRDYGLFTFCLIYI 275

Query: 217 ASAIASSSMSYWFCKAPSVGASGAIFGLVGSFAAFVVRHRKLVGRGN-EDLQHIAHIIIL 276
              ++ + MS+     P+VG +G  F L+G++     ++++++     EDL   A II+ 
Sbjct: 276 LGGVSGNFMSFLHTADPTVGGTGPAFALIGAWLVDQNQNKEMIKSNEYEDLFQKA-IIMT 335

Query: 277 NMAIGIMSRG-IDNWGHLDGI 296
              + +   G ID+W +L  +
Sbjct: 336 GFGLILSHFGPIDDWTNLGAL 355

The following BLAST results are available for this feature:

BLAST of CmaCh19G003010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4ICF4	4.0e-74	53.76	RHOMBOID-like protein 10, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RBL10...	[more]
P54493	1.6e-22	38.92	Rhomboid protease GluP OS=Bacillus subtilis (strain 168) OX=224308 GN=gluP PE=1 ...	[more]
Q695U0	8.8e-13	30.12	Rhomboid-like protease 1 OS=Toxoplasma gondii OX=5811 GN=ROM1 PE=2 SV=1	[more]
Q6IUY1	1.5e-12	38.93	Rhomboid-like protease 3 OS=Toxoplasma gondii OX=5811 GN=ROM3 PE=2 SV=1	[more]
Q9SSR0	2.0e-12	33.33	RHOMBOID-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=RBL5 PE=3 SV=1	[more]

BLAST of CmaCh19G003010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX69	4.4e-164	99.66	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467...	[more]
A0A6J1HJ61	9.4e-159	96.60	RHOMBOID-like protein 10, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1DL86	1.4e-130	79.93	RHOMBOID-like protein 10, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A2I4FV26	6.6e-96	63.31	RHOMBOID-like protein 10, chloroplastic isoform X1 OS=Juglans regia OX=51240 GN=...	[more]
A0A7N2RCU7	1.6e-94	60.20	Rhomboid domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]

BLAST of CmaCh19G003010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967604.1	9.0e-164	99.66	RHOMBOID-like protein 10, chloroplastic [Cucurbita maxima]	[more]
XP_023511751.1	4.6e-160	97.28	RHOMBOID-like protein 10, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG7011445.1	1.8e-159	97.28	RHOMBOID-like protein 10, chloroplastic [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6571721.1	5.1e-159	96.94	RHOMBOID-like protein 10, chloroplastic, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022963855.1	1.9e-158	96.60	RHOMBOID-like protein 10, chloroplastic [Cucurbita moschata]	[more]

BLAST of CmaCh19G003010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G25290.2	8.0e-78	55.51	RHOMBOID-like protein 10	[more]
AT1G25290.1	2.9e-75	53.76	RHOMBOID-like protein 10	[more]
AT1G52580.1	1.4e-13	33.33	RHOMBOID-like protein 5	[more]
AT5G38510.1	1.4e-13	32.62	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G38510.2	1.4e-13	32.62	Rhomboid-related intramembrane serine protease family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 168..295 e-value: 2.1E-37 score: 128.4
IPR035952	Rhomboid-like superfamily	GENE3D	1.20.1540.10		coord: 127..295 e-value: 5.2E-39 score: 135.9
IPR035952	Rhomboid-like superfamily	SUPERFAMILY	144091	Rhomboid-like	coord: 132..295
None	No IPR available	PANTHER	PTHR43731	RHOMBOID PROTEASE	coord: 72..294
None	No IPR available	PANTHER	PTHR43731:SF14	PRESENILINS-ASSOCIATED RHOMBOID-LIKE PROTEIN, MITOCHONDRIAL	coord: 72..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G003010.1	CmaCh19G003010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006465	signal peptide processing
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0004252	serine-type endopeptidase activity