CmaCh19G001950 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAC domain-containing protein
Location	Cma_Chr19: 1304392 .. 1305084 (-)
RNA-Seq Expression	CmaCh19G001950
Synteny	CmaCh19G001950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTTCGTTCTATTGTTTTGATTTCAATTTTCATTAGAATCTTTAACCGTGTTCTTGGAACACTTTAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

mRNA sequence

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Coding sequence (CDS)

ATGGATTCTCGGAATCACTCTCTTCTGCCGGTGGGCGTGAGATTTAGACCCACTGATCCGCAGCTTCTTCGGTATCTAAACTTCAAGATTCACGGCCTCCCGTATTTCAAAGGTGCAGTCTTGGACGGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGCCGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTCCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAAACAAATAATCGGCTATTGCAAGTGCTTCAGGTACGAGAATATCCAATTGCCCCAACATCATGGCGAATGGTTTATGCATGAGTATAGCTTGCACCAAGATTCGATACACCAAGTTGTAGACTCGGATTACGTTTTATGTCGACTTAGCAAGCATGGAAGACTTAAAAGAAAATTACCTAAAAATCTTGAGCTGCAGCAACATAGCAAGAAAAGAATAACGGCGCCTCGATCGACCATCGGACAAGACATTATGTCTAACATGACCATCGATCAAGATTTCAATTTATAA

Protein sequence

MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQHSKKRITAPRSTIGQDIMSNMTIDQDFNL

Homology

[Close]

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9C8W9 (NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.1e-09
Identity = 49/164 (29.88%), Postives = 73/164 (44.51%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-- 60
           MD+   S +P G RF PT+ +L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
            G       YFF+   R      R     NR    A G W        + +  +   +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPTGTR----TNR--ATAAGFWKATGRDKAVLSKNS---VIG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

[Close]

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q8GY42 (NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.2e-08
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 0


Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

[Close]

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.6e-08
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 0


Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

[Close]

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-07
Identity = 64/210 (30.48%), Postives = 93/210 (44.29%), Query Frame = 0


Query: 9   LPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE-HL 68
           LP G RF PTD +LL +YL  K+ G  +    + D DLY + +PW+  L    + GE   
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWD--LPSKALFGEKEW 73

Query: 69  YFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRYEN 128
           YFF+   R   N  R     NR  G  +G W    +   I A   D + +G  K   +  
Sbjct: 74  YFFSPRDRKYPNGSR----PNRVAG--SGYWKATGTDKIITA---DGRRVGIKKALVFYA 133

Query: 129 IQLPQ-HHGEWFMHEYSL--HQDSIHQVVDSDYVLCRLSKH---GRLKRKLPKNLELQQH 188
            + P+     W MHEY L  H  S       D+VLCR+ K     + +   P     ++H
Sbjct: 134 GKAPKGTKTNWIMHEYRLIEHSRSHGSSKLDDWVLCRIYKKTSGSQRQAVTPVQACREEH 193

Query: 189 SKKRITAPRSTIGQDIMSNM--TIDQDFNL 209
           S    ++  S+   D++ +     DQ FNL
Sbjct: 194 STNGSSSSSSSQLDDVLDSFPEIKDQSFNL 211

[Close]

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot
Match: Q9LS24 (NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.3e-07
Identity = 59/197 (29.95%), Postives = 78/197 (39.59%), Query Frame = 0


Query: 7   SLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-FGGIAGE 66
           S LP G RF PTD +L+  YL  K+ GL      +   DLY   +PWE+  + F      
Sbjct: 4   SCLPPGFRFHPTDEELIEYYLKRKVEGLEIELEVIPVIDLY-SFDPWELPDKSFLPNRDM 63

Query: 67  HLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFRY 126
             YFF    +   N  R     NR  G   G W        I  T     IIGY K   +
Sbjct: 64  EWYFFCSRDKKYPNGFR----TNR--GTKAGYWKATGKDRKI--TSRSSSIIGYRKTLVF 123

Query: 127 ENIQLP-QHHGEWFMHEYSLHQDSI---HQVVDSDYVLCRLSKHGRLK-----RKLPKNL 186
              + P      W MHEY L  D      Q +   +VLCR++    +K     RK+P   
Sbjct: 124 YKGRAPLGDRSNWIMHEYRLCDDDTSQGSQNLKGAFVLCRVAMKNEIKTNTKIRKIPSEQ 183

Query: 187 EL----QQHSKKRITAP 189
            +          R+T+P
Sbjct: 184 TIGSGESSGLSSRVTSP 191

[Close]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HXC3 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.0e-120
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITAPRSTIGQDIMSNMTIDQDFNL
Sbjct: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 208

[Close]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 2.1e-85
Identity = 154/186 (82.80%), Postives = 165/186 (88.71%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTD  IIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN+QLP+ HGEW MHEYSLHQDSI Q VD DYVLCR  K+ RLKRKL K+LE QQH
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSIQQAVDLDYVLCRFKKNERLKRKLQKDLEEQQH 180

Query: 181 SKKRIT 187
           SK+R+T
Sbjct: 181 SKRRMT 186

[Close]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.4e-81
Identity = 152/186 (81.72%), Postives = 160/186 (86.02%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRFRPTD QLL+YL +KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
             GE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS S IFATKTDK IIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN QLP+HHGEW MHEYSLHQDSI Q VDS+YVLCR  K+ R KRKL K+LE QQ 
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSIQQAVDSNYVLCRFKKNERFKRKLQKDLEEQQL 180

Query: 181 SKKRIT 187
           SKKR+T
Sbjct: 181 SKKRMT 186

[Close]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HJD2 (uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC111464082 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.1e-76
Identity = 140/160 (87.50%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 49  MEPWEIWLRFGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFA 108
           MEPWEIWLRFGGI GE LYFFTKLKR TNNS  L A+INRK+GLANGTWSGENS SPIFA
Sbjct: 1   MEPWEIWLRFGGINGEDLYFFTKLKRLTNNSEHLWAYINRKIGLANGTWSGENSASPIFA 60

Query: 109 TKTDKQIIGYCKCFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLK 168
           TKTDKQIIGY KCFRYEN+QLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ R++
Sbjct: 61  TKTDKQIIGYFKCFRYENVQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVE 120

Query: 169 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           RKLPKNLELQQHSKKRITAP STIGQD MS++TIDQDFNL
Sbjct: 121 RKLPKNLELQQHSKKRITAPGSTIGQDTMSDVTIDQDFNL 160

[Close]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL
Match: A0A6J1HVP9 (NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111467098 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 6.7e-71
Identity = 128/148 (86.49%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTD  IIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSI 149
            FRYEN+QLP+ HGEW MHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_022967654.1 (NAC transcription factor 25-like [Cucurbita maxima])

HSP 1 Score: 439.9 bits (1130), Expect = 1.2e-119
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITAPRSTIGQDIMSNMTIDQDFNL
Sbjct: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 208

[Close]

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_023511533.1 (NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-100
Identity = 178/208 (85.58%), Postives = 192/208 (92.31%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLLPVGV+F+PTD QLL+YLNFKIH LPYFKGAVLD DLYGE+EPWEIWLRFGG
Sbjct: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHALPYFKGAVLDCDLYGEIEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I G++LYFFTKLKR TNNS  L AHINRK+GLANGTWSGENS SPIFATKTDKQIIGYCK
Sbjct: 61  INGQYLYFFTKLKRLTNNSEHLWAHINRKIGLANGTWSGENSASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYEN+QLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ R+KRKL KNLELQQH
Sbjct: 121 CFRYENVQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERVKRKLLKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRI AP STI QD MS++TIDQDF+L
Sbjct: 181 SKKRIMAPGSTIEQDTMSDVTIDQDFDL 208

[Close]

BLAST of CmaCh19G001950 vs. NCBI nr
Match: KAG6571608.1 (NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 372.9 bits (956), Expect = 1.9e-99
Identity = 178/208 (85.58%), Postives = 190/208 (91.35%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLL VGV+F+PTD QLL+YLNFKIHGLPYFKGAVL  DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNRSLLSVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLYCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKR TNNS  L AHINRK+GLANGTWSGENS SPIFATKTDKQIIGYCK
Sbjct: 61  INGEDLYFFTKLKRLTNNSEHLWAHINRKIGLANGTWSGENSASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYEN+QL +HHGEWFMHEYSLHQD IHQVVDSDYVLCRLSK+ R++RKLPKNLELQQH
Sbjct: 121 CFRYENVQLSEHHGEWFMHEYSLHQDLIHQVVDSDYVLCRLSKNERVERKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRITA  STIGQD MS++TIDQDF+L
Sbjct: 181 SKKRITATGSTIGQDTMSDVTIDQDFDL 208

[Close]

BLAST of CmaCh19G001950 vs. NCBI nr
Match: KAG6571619.1 (NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.5 bits (950), Expect = 9.2e-99
Identity = 178/208 (85.58%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           MDSRN SLLPVGV+F+PTD QLL+YLNFKIHGLPYFKGAVLD DLYGEMEPWEIWL F G
Sbjct: 1   MDSRNRSLLPVGVKFKPTDQQLLQYLNFKIHGLPYFKGAVLDCDLYGEMEPWEIWLCFEG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKR TNNS  L AHIN K+GLANGTWSGEN  SPIFATKTDKQIIGYCK
Sbjct: 61  INGEDLYFFTKLKRLTNNSEHLWAHINHKIGLANGTWSGENLASPIFATKTDKQIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
           CFRYENIQLP+HHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSK+ RL+RKLPKNLELQQH
Sbjct: 121 CFRYENIQLPEHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKNERLERKLPKNLELQQH 180

Query: 181 SKKRITAPRSTIGQDIMSNMTIDQDFNL 209
           SKKRI AP STI QD MS+ TIDQD +L
Sbjct: 181 SKKRIMAPGSTIEQDTMSDTTIDQDIDL 208

[Close]

BLAST of CmaCh19G001950 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 2.0e-85
Identity = 156/186 (83.87%), Postives = 166/186 (89.25%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60
           M S + SLLPVGVRFRPTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MGSHDRSLLPVGVRFRPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120
           I GE LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDK IIGYCK
Sbjct: 61  IDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSIHQVVDSDYVLCRLSKHGRLKRKLPKNLELQQH 180
            FRYEN+QLP+HHGEW MHEYSLHQDSI Q VDSDYVLCR  K+ RLKRKL K+LE QQ 
Sbjct: 121 RFRYENVQLPEHHGEWIMHEYSLHQDSIQQAVDSDYVLCRFKKNERLKRKLQKDLEEQQL 180

Query: 181 SKKRIT 187
           SK+R+T
Sbjct: 181 SKRRMT 186

[Close]

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G71930.1 (vascular related NAC-domain protein 7 )

HSP 1 Score: 65.1 bits (157), Expect = 7.7e-11
Identity = 49/164 (29.88%), Postives = 73/164 (44.51%), Query Frame = 0


Query: 1   MDSRNHSLLPVGVRFRPTDPQLL-RYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLR-- 60
           MD+   S +P G RF PT+ +L+  YL+ KI+ +      +++ DLY +MEPW+I  R  
Sbjct: 1   MDNIMQSSMPPGFRFHPTEEELVGYYLDRKINSMKSALDVIVEIDLY-KMEPWDIQARCK 60

Query: 61  FGGIAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIG 120
            G       YFF+   R      R     NR    A G W        + +  +   +IG
Sbjct: 61  LGYEEQNEWYFFSHKDRKYPTGTR----TNR--ATAAGFWKATGRDKAVLSKNS---VIG 120

Query: 121 YCKCFRYENIQLPQ-HHGEWFMHEYSLHQDSIHQVVDSDYVLCR 161
             K   Y   + P     +W MHEY L    +  V +  +V+CR
Sbjct: 121 MRKTLVYYKGRAPNGRKSDWIMHEYRLQNSELAPVQEEGWVVCR 154

[Close]

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT2G24430.1 (NAC domain containing protein 38 )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 4   RNHSLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIA 63
           +    LP G RF PTD +L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCF 123
           G+  YFF+   R      R +   N       G W        IF   T  +++G  K  
Sbjct: 71  GKEWYFFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPQHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKHGRLKRK 171
            +   + P+  GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAPR--GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

[Close]

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT2G24430.2 (NAC domain containing protein 38 )

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-10
Identity = 52/172 (30.23%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 4   RNHSLLPVGVRFRPTDPQLLR-YLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIA 63
           +    LP G RF PTD +L+  YL  KI    +   A+ D DL  + EPWE+  +   + 
Sbjct: 11  KEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL-NKSEPWELPEK-AKMG 70

Query: 64  GEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCF 123
           G+  YFF+   R      R +   N       G W        IF   T  +++G  K  
Sbjct: 71  GKEWYFFSLRDRKYPTGVRTNRATN------TGYWKTTGKDKEIF-NSTTSELVGMKKTL 130

Query: 124 RYENIQLPQHHGE---WFMHEYSLHQDSIHQVVDSD-YVLCRLSKHGRLKRK 171
            +   + P+  GE   W MHEY LH  S ++    D +V+CR+ K     +K
Sbjct: 131 VFYRGRAPR--GEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK 171

[Close]

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 61.6 bits (148), Expect = 8.5e-10
Identity = 60/212 (28.30%), Postives = 86/212 (40.57%), Query Frame = 0


Query: 6   HSLLPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGE 65
           H  LP G RF PTD +L + YL  K   +P     + + DLY + +PWE  L      GE
Sbjct: 13  HPHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGE 72

Query: 66  H-LYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCKCFR 125
           H  YFF+   R   N  R     NR     +G W    +  PIF   + K  +G  K   
Sbjct: 73  HEWYFFSPRDRKYPNGVR----PNR--AATSGYWKATGTDKPIFTCNSHK--VGVKKALV 132

Query: 126 YENIQLPQH-HGEWFMHEYSLHQDSIHQVVD--------------SDYVLCRLSKHGRLK 185
           +   + P+    +W MHEY L   ++                    D+VLCR+ K     
Sbjct: 133 FYGGKPPKGIKTDWIMHEYRLTDGNLSTAAKPPDLTTTRKNSLRLDDWVLCRIYK----- 192

Query: 186 RKLPKNLELQQHSKKRITAPRSTIGQDIMSNM 201
                     ++S +R T  R  + +D+M  M
Sbjct: 193 ----------KNSSQRPTMERVLLREDLMEGM 198

[Close]

BLAST of CmaCh19G001950 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09
Identity = 48/168 (28.57%), Postives = 73/168 (43.45%), Query Frame = 0


Query: 9   LPVGVRFRPTDPQL-LRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGGIAGEHLY 68
           LP G RF PTD +L + YL  K   +P     + D DLY + +PWE+  +      +  Y
Sbjct: 17  LPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAK-ASFGEQEWY 76

Query: 69  FFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFAT-KTDKQIIGYCKCFRYEN 128
           FF+   R   N  R     NR     +G W    +  P+ +T     + +G  K   + +
Sbjct: 77  FFSPRDRKYPNGAR----PNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVFYS 136

Query: 129 IQLPQH-HGEWFMHEYSLHQDSIHQVVD----------SDYVLCRLSK 164
            + P+    +W MHEY L  +    + D           D+VLCR+ K
Sbjct: 137 GKPPKGVKSDWIMHEYRLTDNKPTHICDFGNKKNSLRLDDWVLCRIYK 176

The following BLAST results are available for this feature:

BLAST of CmaCh19G001950 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8W9	1.1e-09	29.88	NAC domain-containing protein 30 OS=Arabidopsis thaliana OX=3702 GN=NAC030 PE=1 ...	[more]
Q8GY42	1.2e-08	28.30	NAC transcription factor 25 OS=Arabidopsis thaliana OX=3702 GN=NAC025 PE=2 SV=1	[more]
Q9ZNU2	1.6e-08	28.57	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
Q93VY3	1.0e-07	30.48	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
Q9LS24	2.3e-07	29.95	NAC domain-containing protein 96 OS=Arabidopsis thaliana OX=3702 GN=NAC096 PE=1 ...	[more]

BLAST of CmaCh19G001950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HXC3	6.0e-120	100.00	NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=...	[more]
A0A6J1HSR6	2.1e-85	82.80	NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HH13	1.4e-81	81.72	NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1HJD2	4.1e-76	87.50	uncharacterized protein LOC111464082 OS=Cucurbita moschata OX=3662 GN=LOC1114640...	[more]
A0A6J1HVP9	6.7e-71	86.49	NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]

BLAST of CmaCh19G001950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967654.1	1.2e-119	100.00	NAC transcription factor 25-like [Cucurbita maxima]	[more]
XP_023511533.1	1.7e-100	85.58	NAC domain-containing protein 30-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571608.1	1.9e-99	85.58	NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG6571619.1	9.2e-99	85.58	NAC domain-containing protein 30, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_023511534.1	2.0e-85	83.87	NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh19G001950 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71930.1	7.7e-11	29.88	vascular related NAC-domain protein 7	[more]
AT2G24430.1	2.2e-10	30.23	NAC domain containing protein 38	[more]
AT2G24430.2	2.2e-10	30.23	NAC domain containing protein 38	[more]
AT1G61110.1	8.5e-10	28.30	NAC domain containing protein 25	[more]
AT1G52880.1	1.1e-09	28.57	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 10..143 e-value: 1.4E-16 score: 61.5
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 9..164 score: 21.504944
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 18..167 e-value: 7.3E-22 score: 79.8
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 4..162
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 9..190
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 9..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001950.1	CmaCh19G001950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding