CmaCh19G001940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAC domain-containing protein
Location	Cma_Chr19: 1302448 .. 1302968 (+)
RNA-Seq Expression	CmaCh19G001940
Synteny	CmaCh19G001940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTTCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGGTTCGTTTTGTCATTTTGATTTCAATTTTTGATAGATTCTTTAACCTTATGTTTGTGTCCTTTGAACATTTTAGGTACGAGAATGTCCAATTGCCCGAGCGTCATGGCGAATGGATTATGCATGAATATAGCTTGCATCAAGATTCGATATAA

mRNA sequence

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTTCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGGTACGAGAATGTCCAATTGCCCGAGCGTCATGGCGAATGGATTATGCATGAATATAGCTTGCATCAAGATTCGATATAA

Coding sequence (CDS)

ATGGATTCTCATGATTGCCCTCTCTTGCCCGTGGGAGTGAGATTCAAGCCTACTGATCCGCAACTTCTTCAATATCTACACTGGAAAATTCATGGCCAACCATATTTCAAACGTGCAGTCTTGGACTGTGATCTTTATGGAGAAATGGAGCCATGGGAAATCTGGCTACGGTTCGGAGGCATCGACGGCGAACATCTCTATTTCTTCACCAAACTCAAGAGGTTCACCAATAACTCTGGACGTTTGTCGGCGCATATCAACCGCAAGGTTGGCTTGGCCAACGGTACATGGAGTGGCGAGAACTCGGGCAGTCCAATTTTTGCTACCAAAACCGATAATACAATAATCGGCTATTGCAAACGCTTTAGGTACGAGAATGTCCAATTGCCCGAGCGTCATGGCGAATGGATTATGCATGAATATAGCTTGCATCAAGATTCGATATAA

Protein sequence

MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYENVQLPERHGEWIMHEYSLHQDSI

Homology

[Close]

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot
Match: A2YMR0 (NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC010 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 42/143 (29.37%), Postives = 64/143 (44.76%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +    + E 
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLY-KFDPWELPEKANFGEQEW 86

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYE 126
            +F  + +++ N      A  NR     +G W    +  PI A+ +    +G  K   + 
Sbjct: 87  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPIMASGSTREKVGVKKALVFY 146

Query: 127 NVQLPER-HGEWIMHEYSLHQDS 148
             + P+     WIMHEY L   S
Sbjct: 147 RGKPPKGVKTNWIMHEYRLTDTS 161

[Close]

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot
Match: Q9ZNU2 (NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 41/140 (29.29%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + D DLY + +PWE+  +    + E 
Sbjct: 15  PNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAKASFGEQEW 74

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNT-IIGYCKRFRY 126
            +F  + +++ N      A  NR     +G W    +  P+ +T    +  +G  K   +
Sbjct: 75  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVF 134

Query: 127 ENVQLPER-HGEWIMHEYSL 144
            + + P+    +WIMHEY L
Sbjct: 135 YSGKPPKGVKSDWIMHEYRL 146

[Close]

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot
Match: Q9LD44 (NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.1e-07
Identity = 41/139 (29.50%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +    + E 
Sbjct: 15  PNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLY-KFDPWELPAKASFGEQEW 74

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYE 126
            +F  + +++ N      A  NR     +G W    +  P+ A+   N  +G  K   + 
Sbjct: 75  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPVLAS-DGNQKVGVKKALVFY 134

Query: 127 NVQLPER-HGEWIMHEYSL 144
           + + P+    +WIMHEY L
Sbjct: 135 SGKPPKGVKSDWIMHEYRL 144

[Close]

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot
Match: Q93VY3 (NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 8.0e-07
Identity = 44/141 (31.21%), Postives = 67/141 (47.52%), Query Frame = 0


Query: 9   LPVGVRFKPTDPQLL-QYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEHLY 68
           LP G RF PTD +LL QYL  K+ G  +  + + D DLY + +PW++  +    + E  +
Sbjct: 14  LPPGFRFYPTDEELLVQYLCRKVAGYHFSLQVIGDIDLY-KFDPWDLPSKALFGEKEWYF 73

Query: 69  FFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYENV 128
           F  + +++ N S       NR  G  +G W    +   I A   D   +G  K   +   
Sbjct: 74  FSPRDRKYPNGS-----RPNRVAG--SGYWKATGTDKIITA---DGRRVGIKKALVFYAG 133

Query: 129 QLPE-RHGEWIMHEYSLHQDS 148
           + P+     WIMHEY L + S
Sbjct: 134 KAPKGTKTNWIMHEYRLIEHS 143

[Close]

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot
Match: Q8H4S4 (NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC010 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.0e-06
Identity = 40/143 (27.97%), Postives = 64/143 (44.76%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PW++  +    + E 
Sbjct: 27  PELPPGFRFHPTDEELVVHYLKKKAASVPLPVTIIAEVDLY-KFDPWDLPEKANFGEQEW 86

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYE 126
            +F  + +++ N      A  NR     +G W    +  PI ++ +    +G  K   + 
Sbjct: 87  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPIMSSGSTREKVGVKKALVFY 146

Query: 127 NVQLPER-HGEWIMHEYSLHQDS 148
             + P+     WIMHEY L   S
Sbjct: 147 RGKPPKGVKTNWIMHEYRLTDTS 161

[Close]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL
Match: A0A6J1HVP9 (NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111467098 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-86
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPERHGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL
Match: A0A6J1HSR6 (NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC111467095 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 4.4e-85
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPERHGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL
Match: A0A6J1HH13 (NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463973 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.1e-78
Identity = 137/148 (92.57%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRF+PTD QLLQYL WKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS S IFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYEN QLPE HGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL
Match: A0A6J1HIZ2 (NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.4e-75
Identity = 131/148 (88.51%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHD PLLPVGVRF+PTD QLLQYL WKIH QPYFKRAVLDCDLYG+MEPWEIWLRFGG
Sbjct: 1   MDSHDRPLLPVGVRFRPTDQQLLQYLLWKIHDQPYFKRAVLDCDLYGDMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
            DGE+LYFFTKLKR TNNSGRLS HINRKVGL NGTWSGENS +PIFA KTD TIIGYCK
Sbjct: 61  TDGENLYFFTKLKRSTNNSGRLSVHINRKVGLTNGTWSGENSANPIFAAKTDKTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYEN QLPE HGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL
Match: A0A6J1HXC3 (NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 128/148 (86.49%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDS +  LLPVGVRF+PTDPQLL+YL++KIHG PYFK AVLD DLYGEMEPWEIWLRFGG
Sbjct: 1   MDSRNHSLLPVGVRFRPTDPQLLRYLNFKIHGLPYFKGAVLDGDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           I GEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTD  IIGYCK
Sbjct: 61  IAGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDKQIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
            FRYEN+QLP+ HGEW MHEYSLHQDSI
Sbjct: 121 CFRYENIQLPQHHGEWFMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. NCBI nr
Match: XP_022967653.1 (NAC domain-containing protein 18-like [Cucurbita maxima])

HSP 1 Score: 328.9 bits (842), Expect = 2.2e-86
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPERHGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. NCBI nr
Match: XP_022967651.1 (NAC domain-containing protein 72-like [Cucurbita maxima])

HSP 1 Score: 323.6 bits (828), Expect = 9.2e-85
Identity = 146/148 (98.65%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           IDGEHLYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTDNTIIGYCK
Sbjct: 61  IDGEHLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDNTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPERHGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. NCBI nr
Match: XP_023511534.1 (NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 5.8e-79
Identity = 139/148 (93.92%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           M SHD  LLPVGVRF+PTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MGSHDRSLLPVGVRFRPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
           IDGE LYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTD TIIGYCK
Sbjct: 61  IDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPE HGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPEHHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. NCBI nr
Match: KAG6571625.1 (NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 302.4 bits (773), Expect = 2.2e-78
Identity = 137/148 (92.57%), Postives = 140/148 (94.59%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHD PLLPVGVRF+PTD QLLQYLHWK+HGQPYFKRAVLDCDLYGE+EPWEIWLRFGG
Sbjct: 1   MDSHDHPLLPVGVRFRPTDQQLLQYLHWKMHGQPYFKRAVLDCDLYGEIEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS SPIFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASPIFATKTDKTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYENVQLPE HGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENVQLPEHHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. NCBI nr
Match: XP_022963781.1 (NAC domain-containing protein 30-like [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 6.4e-78
Identity = 137/148 (92.57%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 1   MDSHDCPLLPVGVRFKPTDPQLLQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60
           MDSHDCPLLPVGVRF+PTD QLLQYL WKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG
Sbjct: 1   MDSHDCPLLPVGVRFRPTDQQLLQYLIWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGG 60

Query: 61  IDGEHLYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCK 120
            DGE LYFFTKLKR TNNSGRLSAHINRKVGLANGTWSGENS S IFATKTD TIIGYCK
Sbjct: 61  TDGEDLYFFTKLKRSTNNSGRLSAHINRKVGLANGTWSGENSASSIFATKTDKTIIGYCK 120

Query: 121 RFRYENVQLPERHGEWIMHEYSLHQDSI 149
           RFRYEN QLPE HGEWIMHEYSLHQDSI
Sbjct: 121 RFRYENAQLPEHHGEWIMHEYSLHQDSI 148

[Close]

BLAST of CmaCh19G001940 vs. TAIR 10
Match: AT1G52880.1 (NAC (No Apical Meristem) domain transcriptional regulator superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 41/140 (29.29%), Postives = 65/140 (46.43%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + D DLY + +PWE+  +    + E 
Sbjct: 15  PNLPPGFRFHPTDEELVIHYLKRKADSVPLPVAIIADVDLY-KFDPWELPAKASFGEQEW 74

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNT-IIGYCKRFRY 126
            +F  + +++ N      A  NR     +G W    +  P+ +T    +  +G  K   +
Sbjct: 75  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPVISTGGGGSKKVGVKKALVF 134

Query: 127 ENVQLPER-HGEWIMHEYSL 144
            + + P+    +WIMHEY L
Sbjct: 135 YSGKPPKGVKSDWIMHEYRL 146

[Close]

BLAST of CmaCh19G001940 vs. TAIR 10
Match: AT3G15510.1 (NAC domain containing protein 2 )

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-08
Identity = 41/139 (29.50%), Postives = 65/139 (46.76%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE+  +    + E 
Sbjct: 15  PNLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIAEVDLY-KFDPWELPAKASFGEQEW 74

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYE 126
            +F  + +++ N      A  NR     +G W    +  P+ A+   N  +G  K   + 
Sbjct: 75  YFFSPRDRKYPN-----GARPNR--AATSGYWKATGTDKPVLAS-DGNQKVGVKKALVFY 134

Query: 127 NVQLPER-HGEWIMHEYSL 144
           + + P+    +WIMHEY L
Sbjct: 135 SGKPPKGVKSDWIMHEYRL 144

[Close]

BLAST of CmaCh19G001940 vs. TAIR 10
Match: AT1G61110.1 (NAC domain containing protein 25 )

HSP 1 Score: 54.7 bits (130), Expect = 7.4e-08
Identity = 41/139 (29.50%), Postives = 60/139 (43.17%), Query Frame = 0


Query: 7   PLLPVGVRFKPTDPQL-LQYLHWKIHGQPYFKRAVLDCDLYGEMEPWEIWLRFGGIDGEH 66
           P LP G RF PTD +L + YL  K    P     + + DLY + +PWE  L      GEH
Sbjct: 14  PHLPPGFRFHPTDEELVVHYLKKKADSVPLPVSIIAEIDLY-KFDPWE--LPSKASFGEH 73

Query: 67  LYFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYE 126
            ++F     F+    +    +       +G W    +  PIF   +    +G  K   + 
Sbjct: 74  EWYF-----FSPRDRKYPNGVRPNRAATSGYWKATGTDKPIFTCNSHK--VGVKKALVFY 133

Query: 127 NVQLPER-HGEWIMHEYSL 144
             + P+    +WIMHEY L
Sbjct: 134 GGKPPKGIKTDWIMHEYRL 142

[Close]

BLAST of CmaCh19G001940 vs. TAIR 10
Match: AT4G35580.1 (NAC transcription factor-like 9 )

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 44/136 (32.35%), Postives = 62/136 (45.59%), Query Frame = 0


Query: 9   LPVGVRFKPTDPQLL-QYLHWKIHGQPYFKRAVLDCDLYGEMEPWEI-WLRFGGIDGEHL 68
           LP+G RF+PTD +L+  YL  KI+G+    R + D D+  + EPW++  L     D    
Sbjct: 9   LPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVC-KWEPWDLPALSVIKTDDPEW 68

Query: 69  YFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYEN 128
           +FF    R   N  R     NR     +G W        I   K+  T+IG  K   +  
Sbjct: 69  FFFCPRDRKYPNGHR----SNRATD--SGYWKATGKDRSI---KSKKTLIGMKKTLVFYR 128

Query: 129 VQLPE-RHGEWIMHEY 142
            + P+     WIMHEY
Sbjct: 129 GRAPKGERTNWIMHEY 134

[Close]

BLAST of CmaCh19G001940 vs. TAIR 10
Match: AT4G35580.2 (NAC transcription factor-like 9 )

HSP 1 Score: 53.1 bits (126), Expect = 2.2e-07
Identity = 44/136 (32.35%), Postives = 62/136 (45.59%), Query Frame = 0


Query: 9   LPVGVRFKPTDPQLL-QYLHWKIHGQPYFKRAVLDCDLYGEMEPWEI-WLRFGGIDGEHL 68
           LP+G RF+PTD +L+  YL  KI+G+    R + D D+  + EPW++  L     D    
Sbjct: 9   LPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVC-KWEPWDLPALSVIKTDDPEW 68

Query: 69  YFFTKLKRFTNNSGRLSAHINRKVGLANGTWSGENSGSPIFATKTDNTIIGYCKRFRYEN 128
           +FF    R   N  R     NR     +G W        I   K+  T+IG  K   +  
Sbjct: 69  FFFCPRDRKYPNGHR----SNRATD--SGYWKATGKDRSI---KSKKTLIGMKKTLVFYR 128

Query: 129 VQLPE-RHGEWIMHEY 142
            + P+     WIMHEY
Sbjct: 129 GRAPKGERTNWIMHEY 134

The following BLAST results are available for this feature:

BLAST of CmaCh19G001940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A2YMR0	2.1e-07	29.37	NAC transcription factor ONAC010 OS=Oryza sativa subsp. indica OX=39946 GN=ONAC0...	[more]
Q9ZNU2	2.1e-07	29.29	NAC domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=NAC018 PE=2 ...	[more]
Q9LD44	2.1e-07	29.50	NAC transcription factor 56 OS=Arabidopsis thaliana OX=3702 GN=NAC056 PE=2 SV=1	[more]
Q93VY3	8.0e-07	31.21	NAC domain-containing protein 72 OS=Arabidopsis thaliana OX=3702 GN=NAC072 PE=2 ...	[more]
Q8H4S4	1.0e-06	27.97	NAC domain-containing protein 10 OS=Oryza sativa subsp. japonica OX=39947 GN=NAC...	[more]

BLAST of CmaCh19G001940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVP9	1.1e-86	100.00	NAC domain-containing protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HSR6	4.4e-85	98.65	NAC domain-containing protein 72-like OS=Cucurbita maxima OX=3661 GN=LOC11146709...	[more]
A0A6J1HH13	3.1e-78	92.57	NAC domain-containing protein 30-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A6J1HIZ2	5.4e-75	88.51	NAC transcription factor 25-like OS=Cucurbita moschata OX=3662 GN=LOC111463972 P...	[more]
A0A6J1HXC3	2.1e-71	86.49	NAC transcription factor 25-like OS=Cucurbita maxima OX=3661 GN=LOC111467099 PE=...	[more]

BLAST of CmaCh19G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967653.1	2.2e-86	100.00	NAC domain-containing protein 18-like [Cucurbita maxima]	[more]
XP_022967651.1	9.2e-85	98.65	NAC domain-containing protein 72-like [Cucurbita maxima]	[more]
XP_023511534.1	5.8e-79	93.92	NAC domain-containing protein 72-like [Cucurbita pepo subsp. pepo]	[more]
KAG6571625.1	2.2e-78	92.57	NAC domain-containing protein JA2L, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022963781.1	6.4e-78	92.57	NAC domain-containing protein 30-like [Cucurbita moschata]	[more]

BLAST of CmaCh19G001940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52880.1	1.5e-08	29.29	NAC (No Apical Meristem) domain transcriptional regulator superfamily protein	[more]
AT3G15510.1	1.5e-08	29.50	NAC domain containing protein 2	[more]
AT1G61110.1	7.4e-08	29.50	NAC domain containing protein 25	[more]
AT4G35580.1	2.2e-07	32.35	NAC transcription factor-like 9	[more]
AT4G35580.2	2.2e-07	32.35	NAC transcription factor-like 9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 10..143 e-value: 5.9E-19 score: 69.2
IPR003441	NAC domain	PROSITE	PS51005	NAC	coord: 9..148 score: 19.866526
IPR036093	NAC domain superfamily	GENE3D	2.170.150.80	NAC domain	coord: 18..148 e-value: 8.1E-21 score: 76.4
IPR036093	NAC domain superfamily	SUPERFAMILY	101941	NAC domain	coord: 5..146
None	No IPR available	PANTHER	PTHR31989:SF220	NAC TRANSCRIPTION FACTOR-LIKE PROTEIN	coord: 9..145
None	No IPR available	PANTHER	PTHR31989	NAC DOMAIN-CONTAINING PROTEIN 82-RELATED	coord: 9..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001940.1	CmaCh19G001940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding