CmaCh19G001720 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001720
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Reverse transcriptase
Location	Cma_Chr19: 1146390 .. 1152470 (+)
RNA-Seq Expression	CmaCh19G001720
Synteny	CmaCh19G001720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATACAAACGAAGGTTGCAGATTTGGAGGTCGGCGACAGACTAGGGTTTTTGCTTGGAATATTGTTGTTGTTTCTCCCAATTGCTTCACGATGATCTACGACGTCAACTCTCATCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGGTATGCGATGCTCTTCTTTTCACCATGTTTACAATTAGAAACGTATTTGTGGAGATTTTTTTTTTTTTTTGTTGTTGTTATAAGGTGGTTCGTTAACTTGATTTTCTCTCTTTTCTGTAACTGTCTATTTGTTTGATTTTGGATTCTAGGTTGTTTTGATTTTCGTTTACTTTATTTTGCTTTTGATTTGGCTCTGTAAGTTGTCTTATTAGTCTGCTATTGGCTTGTTTGATTGTGCTGCCTTTTGGCTTTCTTTAGATGTTAGTAAATTGAGCTAGAGGCTCTAGAAGTTTAGGTTGCTGAATGGATATCGAAATTTGTTTGAAATTGATCTTGCGAACGAAACTAACAGCGTTTGAATGCTCATAGAATTGGTAGCTTTTATTTTGCCGTTTAGTTCTCTATTCGTTCTTCGTCTTGCTTTTATTATCGATGTTTGCTCTCGAATCTTCAAAGATTTCTGTACTTCAAGCGTACTTGTTGCTTGCTAATGAATAAAAGCATGAAGCATTATTTTAAAAAAAAAAACATTCTATTTTGAAGCGTCATGCAGATTTAATTGCTATGAATGATCCAATAGAGTTTTGACCGGCGAACTATGCCAAACTTTTACGGAAAGCTTTTTAGCATAGTTTATTTACTTCCGTTCTAGATTCCTTGAGACTTTTGGATTTGCCTGTTTTTAACTCGGTACATAGTTAGGCGACAATAGGTTTTGCAATTTCTTTTTAAACTATATGTTCTTTAAGATTTTCAAGTGTAAATTAAACTTCCTTTTGGAATCTTCTGTTGCATGGAACAACAGACATTTAACAACACCGCCTTTAGCATTTAGCAATATTTTTCTTGAATTAATTTTAGTGTCTGCTTTTATCTTGGTGTAAATGTTACTACACTGCCTTCACCAATTTTAATCTCAACGATCTTTTGGCCTTTTTTTGGCAATTTCTTTAGCCTGGAGCTTAGGTTTCCTCCCTTTTCGTTTCATCCTACCAATCTGTTTCATATTAAAAAAAAAAAAAGAGAGCAAAAAAAGTGCATATATTAATCCTTTGTTTTATTTTAGAAAAAAGAAAAAAGCGCATGACCGACTTAACTATCTTTACTTCAGATGTTTTGGATCTGGCCTGGCTTACCGTTTATTCTATGCGATATTAATTCCATGGTTTAAAGATTATGATTCAACTGTAGTGAATATTTTAATAGACGAAACCTAAAGGTTAAATATTGTACCCTTCGTTCCTTTTGTTTTCCTCTCTCATTATTCAACTTCCATAATATCCATAATTGTTGTTGCAAATGATTAAGGCAGCATTTAAAAGGGGAAATAATTTTATTCTTGTGTTGAATGCTTATCTCTACTGTTTGAATTACGCAAGAGTCTGGCTTTACTTTCCCCAATGCGTAATTAAAAGTAATAATAACATAATATATTCTGTATTCGTTACTCAATTTTCTTCTCTGTTCTGTTTGTTAATATTTTTATAATTACTCACTGAACAACATTTTACTTAATTGGTGTCCCTTGTGGGCTCCCCTTTTTAGGCCTCTCCTTGTTGTAGGACTGTGTATTCTTTCATTTTGTCTCAATGAAAGTTCGATTTTTACATAATACAAGAAGAATATATTTTGAATTTCGAAATGTATTTTCTCGATTTGGAGTAGTTACATTGTCGTGTTATAAATGAGAATTTGTAGCCTTATCAGTTGTTTGTGATGTTTACTTCAGAAAAATTGAGGAGCAGAAGCCCAAAGAGCAAAGATTCAAGGCAAATGAGAACAAGCCTGTCATGACAGAGTAATAACAACGTGAATATGTAGGTTGTTGATCATATTTTAGTCAAGTTTGAATTGTTTCAATAGAACCAGTTTTCATATTCCTTGTATGACTTTATTAACGCTCTGCCATATGGAGGCTTTGGGCTTGCAATGAGCAAGTTTATGTCAATTCATTATTTTATAATCCAAGCACATCTTTCTTTTTGTGATTTTATTTGTTGGCCAAGCCTTTTATGTCAATTTATGAGTGTTTTTGTCACTGATAAATGCTTTGCTAGTAGTACGGTTGATGTTATGATGAAACGAAGGTTTGATATCTTTAATATTTCTTCATTGGGGTCGGTGGATGATTGGAGAAAAGATGATAATTGGGTGGATTCATCCTTTCTATTCCTTTTTGACTTTTAATTGAACGCAGGGCAAACAGAAATATAATTATAAAACATTTGCATTGGACAAACACAAATGGAGAAGAAATCTTCCTTCTTGGGCGACGGGAACATATCTTAACATTGTCAACCTTGGTGGGCCCATCCCCGTAAAGCATCCGAAACACCATTATTGCCGTCTTGGCAATGGCAGGACACAAGCATTGTAAGTAACAATATTTATCTACAAATAAACCTCCCTCGTGACTTTAGAATTTTTCTTTTCTTGTTTGTATTCTTGTTATTGAATTAAATACGTATGTCTGCATGTAAATAAAGGCGATGGTAAGGCATTCATTAGGGGTAAACGAAAAAGAACCATCTTCAGTTTTTAGAATCTTTACCTCCTTTCCCATTTATGAAGAATTGCCATGGACCGTAAAGACGTGTCTAATTTGCAGCGTCTGTTGCAAAGGCATGCACGCAAGTAGCCATAATCAGTAGTTGGATTGTCATGATGTCATTCCTTTTATAGCCTTCAAAAGTCCTATTCCCACACTACAACCATCCCACTTCCATGAGGGTTTGCTTTAGGCCGTGAGTTATCCAATCCAATAACAAGAAATTTCTGAGATTTAGCATTAGGTTATGACTTAAAAGACTTTTCAGAGGGGGAGGGTGTTCTTTTATTTAAATGGCTCATCTCTAAATTTTTAAAATGTTTAGCAAGTCTTTGAATGTTAATCGTGTTTATTAACGCTGGATATAAATTTGAAATTTATATTTAATAGAGTTATAAAGATTTAATTTTGTATTTAGTAAATCTAAATAATGATTAGATTAAGAATTTGTTAGATATAAAATTGTAAGTTTAAGGACTTGCTAGATAGTTTTAAATTTTTTACATCCATTAGACATAAATTAGAAATTTAGAAATTTATAACTTAATCACATATATCCCATAACTATAGGTTTTTTTTTTTTTTTTTTACTCGTTTCTGCCACCTTCTATATAAGATTATTTTATGTGGAGATGCAATCTCTTTCTAGGTCTGGTGTCCACAAACGTGCCTCATTTTTGCATTCACAATTCTGACCTTTCCTTCCGTTTCTTCTGTTATTTTTTCGCAAGCCTTTTTTTCCTTCTTTTTTTCCCCATTTCTCTTCCTTTATAATGTTTGGTAGTTTTAGAAGATACAACCTCGATGTCAATCCATTTGATAACAGCTCCAAGTCTAAACTTTTAGAAGTATATGAGTTCTATGAAGTTTATCAAATTTGGCCTAGTCGAGTTTGATAGGAATTGATAAAGTTAGAAACTTATGAAACCTACAATTTTGGTTGAGGATTGTTGGGAGAGGAATTACGCATTGACTAACTAAAGGGAAGGTCATGGTTCATGAGTAAGGAATACTATATCCATTGAAATGAGGCCTTTTAGAAAAAATCAAAAGTAAAGCCATAATATTTTTTATGCTTAAAGTAATATTATACATTGGGAAGAATTGTGGTTTTTATCTATTTATTTTTTCGGTGATTTTGTAATGAAATTACTATGATTTCATCCATGGTAAATAAATGATATGGTCATTTTAGGCTGTTTGAAGTTGTAAATCAATATGAATGTAGGGTTGGTAGTTATGGTAAGTGCTAGAAAGCTAGAAAGCTATTTCAACAAACAAAAAGGCTAAAATTACTGCTAATGGACTGCTTTAATTTAACCTTTTGCCTTAAAGTTGAACAAATAATGGTATTATAATGTTCCTAATTTATGGGTTTGCCATCTCAATGATCATAGCCACTGTAATCATATGAATTCTTCTGAATTGAAACCTGTCAGTTTTTCAATCATGCCACAATTTTAGTCTTTTATTTCAAAAAGTGTAGTAATCTAAGTTGGTTGATTTCAACAATTTTTTTTCTTATTTTATTTATTATCAATTTGTAGGAAGTGAGTTCATTCTTTTTAGTGTGTATTTTTTTTAGGTTTTTTTTTTTTTCATGGTTATTAACCAATTGAATTATGATTAAGTCAGTAGTATTAGAATCTTACTCATGGTTCTTAATCACATCATAAGCTATGATTTAGCTGATCAGACTAAATCATTTTAATTTTTTCACATAGGAATTTGAGTGCATAAGGGAGTTCCTTCTCGGTTTTGCATGTCAAATGGCAACTACTCTATTTCGTATCATCCCACCCAAACCTATACGTTATTTCACTAACAATCATCTAATTCTTAAAAAAGGTAGACCCACGACTATTTTAGCACATATCTTAATAACCTGATCGTAGACTGAAATAGGATAACCTAATAATAAGGTCGTGTCAAGCTTTTCTTTGGTTTCACTCTCTGAATTGGTATGGTAACCACTAAACTTTGTTTTCGATAACCATGTAAGAGTAGTTCTAAAAGATTCATGGTCTTAAGAAATTAAAAAATTAGAGTGAAAGAAAAAGATCATGGAGAGAATCATAATAATTTGATAGTTAGATTGTAAAGACCTGCCATTTTCTTTCCCTTGTTCTTTGCCTCCTCTTTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTTCAGTCTCTTTCCTTTATTCACGCCGCTTTCTCTCCCAATTCTCACAGTTCCTCTCTCTCCTCTCCATTTCATTACCAAAATCTACTCTCCCACTGAACTTTCCCCCAACAAACTCCACCATCGCCATTCTTACAGAGCTTCGAAAACAGAGAGAAAAAAAGGAAAGAAATCATAAACAATGTCTGAAATTTCCATCTCCAAGAAAGCATTTGGATTGTCCTGTGTTTCTCACTTCTTCCATTTCTTCTTCTTTCTCCTCTCTCACCCTCTTCACTTGTCTTTCTTCATCTTCTTCTTCCCTTACTTTCTCAAGCTTCTTTCCTTTCTCTCTCCTCTCTTCATCACCACTTTTCTCCTCCTCTTTGCATTATTCTCTCTGTTTGATCATCATCTTCATCACCATTTTCATCATTTTGCAGATTCTTCCAAAATGGGATTTCTTGCTACTACTTACCATGTTGTTTTTGACAGTTTACGCCCAAGAACACCAGACGAATCCCCCATGGAAGAGCTTGAAGCTTACAAAATCGTGTTTGAGGCTTACACTTTTGGCTCTGAACAAAACCCATATGAACACAGTCTCCAAGAAGTGGAAGTGGAAGTCGATTTTCAAGAACCCATGGCGCATTTTCCCGAGAAAATCAAACCTCTCCCGGAAAATTCCCTGATAGCAGAAGTTGAAGCAAAAACAGAGGAATTACAAGAAGCCAAATTCGAAAACAGAGATGAAAAGCATGAAATCATGAAAGATTTGAGAAAAATCACAGAAGAATCATCGAGTTCTTCAAGATCTGAATCGAGTCCTCCATGGAGTTCACCAGGGAGTTTCAATAGAGAAAATTCATCATTAGGAAGCTATGGATCGATGAGGAAGGAGAAAGAATGGCGAAGAACACTCGCCTGTAAGCTCTTCGAAGAGCGGCACAGTTCAGAGGAAACAGAAGGGATGGATTCACTGTGGGAAACATACGAGAAGAAGGAGAAAGACGATAGAAAATCCAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGGGCAACTTTGCTGCTTACAGGCACTGAAATTCTCGGCGGGGAAGATGAATTTGGGAATGAGGAGACCAAATCTTATGAAAATGACCAAAGCTTTGAAGGGATTTGGATGGTTGAGCAGAAAAGGAAGTAGAAAGAGATTGATCCATTGA

mRNA sequence

ATACAAACGAAGGTTGCAGATTTGGAGGTCGGCGACAGACTAGGGTTTTTGCTTGGAATATTGTTGTTGTTTCTCCCAATTGCTTCACGATGATCTACGACGTCAACTCTCATCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGAAAAATTGAGGAGCAGAAGCCCAAAGAGCAAAGATTCAAGGCAAATGAGAACAAGCCTGGCAAACAGAAATATAATTATAAAACATTTGCATTGGACAAACACAAATGGAGAAGAAATCTTCCTTCTTGGGCGACGGGAACATATCTTAACATTGTCAACCTTGGTGGGCCCATCCCCGTAAAGCATCCGAAACACCATTATTGCCGTCTTGGCAATGGCAGGACACAAGCATTTTTACGCCCAAGAACACCAGACGAATCCCCCATGGAAGAGCTTGAAGCTTACAAAATCGTGTTTGAGGCTTACACTTTTGGCTCTGAACAAAACCCATATGAACACAGTCTCCAAGAAGTGGAAGTGGAAGTCGATTTTCAAGAACCCATGGCGCATTTTCCCGAGAAAATCAAACCTCTCCCGGAAAATTCCCTGATAGCAGAAGTTGAAGCAAAAACAGAGGAATTACAAGAAGCCAAATTCGAAAACAGAGATGAAAAGCATGAAATCATGAAAGATTTGAGAAAAATCACAGAAGAATCATCGAGTTCTTCAAGATCTGAATCGAGTCCTCCATGGAGTTCACCAGGGAGTTTCAATAGAGAAAATTCATCATTAGGAAGCTATGGATCGATGAGGAAGGAGAAAGAATGGCGAAGAACACTCGCCTGTAAGCTCTTCGAAGAGCGGCACAGTTCAGAGGAAACAGAAGGGATGGATTCACTGTGGGAAACATACGAGAAGAAGGAGAAAGACGATAGAAAATCCAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGGGCAACTTTGCTGCTTACAGGCACTGAAATTCTCGGCGGGGAAGATGAATTTGGGAATGAGGAGACCAAATCTTATGAAAATGACCAAAGCTTTGAAGGGATTTGGATGGTTGAGCAGAAAAGGAAGTAGAAAGAGATTGATCCATTGA

Coding sequence (CDS)

ATGATCTACGACGTCAACTCTCATCTGTTCCGCTCTTTCCTCAGCCAGAAGGGAGGAGGAGCCTACGACAAAAGAAAAATTGAGGAGCAGAAGCCCAAAGAGCAAAGATTCAAGGCAAATGAGAACAAGCCTGGCAAACAGAAATATAATTATAAAACATTTGCATTGGACAAACACAAATGGAGAAGAAATCTTCCTTCTTGGGCGACGGGAACATATCTTAACATTGTCAACCTTGGTGGGCCCATCCCCGTAAAGCATCCGAAACACCATTATTGCCGTCTTGGCAATGGCAGGACACAAGCATTTTTACGCCCAAGAACACCAGACGAATCCCCCATGGAAGAGCTTGAAGCTTACAAAATCGTGTTTGAGGCTTACACTTTTGGCTCTGAACAAAACCCATATGAACACAGTCTCCAAGAAGTGGAAGTGGAAGTCGATTTTCAAGAACCCATGGCGCATTTTCCCGAGAAAATCAAACCTCTCCCGGAAAATTCCCTGATAGCAGAAGTTGAAGCAAAAACAGAGGAATTACAAGAAGCCAAATTCGAAAACAGAGATGAAAAGCATGAAATCATGAAAGATTTGAGAAAAATCACAGAAGAATCATCGAGTTCTTCAAGATCTGAATCGAGTCCTCCATGGAGTTCACCAGGGAGTTTCAATAGAGAAAATTCATCATTAGGAAGCTATGGATCGATGAGGAAGGAGAAAGAATGGCGAAGAACACTCGCCTGTAAGCTCTTCGAAGAGCGGCACAGTTCAGAGGAAACAGAAGGGATGGATTCACTGTGGGAAACATACGAGAAGAAGGAGAAAGACGATAGAAAATCCAAGAAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAAGAAGAAGGGCAACTTTGCTGCTTACAGGCACTGAAATTCTCGGCGGGGAAGATGAATTTGGGAATGAGGAGACCAAATCTTATGAAAATGACCAAAGCTTTGAAGGGATTTGGATGGTTGAGCAGAAAAGGAAGTAGAAAGAGATTGATCCATTGA

Protein sequence

MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKPGKQKYNYKTFALDKHKWRRNLPSWATGTYLNIVNLGGPIPVKHPKHHYCRLGNGRTQAFLRPRTPDESPMEELEAYKIVFEAYTFGSEQNPYEHSLQEVEVEVDFQEPMAHFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSPPWSSPGSFNRENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKEKDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLMKMTKALKGFGWLSRKGSRKRLIH

Homology

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BLAST of CmaCh19G001720 vs. ExPASy Swiss-Prot
Match: Q09020 (Wound-induced basic protein OS=Phaseolus vulgaris OX=3885 GN=PR4 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKGG + DKRK EEQKPKE R KA+ENKP
Sbjct: 1  MIYDVNSPLFRSFLSQKGGSS-DKRKTEEQKPKEHRPKASENKP 43

[Close]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL
Match: A0A6J1HI04 (uncharacterized protein LOC111463823 OS=Cucurbita moschata OX=3662 GN=LOC111463823 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 2.9e-111
Identity = 230/269 (85.50%), Postives = 235/269 (87.36%), Query Frame = 0


Query: 87  HPKHHYCRLGNGRTQAF-----------LRPRTPDESPMEELEAYKIVFEAYTFGSEQNP 146
           H  HH+    +     F           LRPRTPDESPMEELEAYKIVFEAYTFGSEQNP
Sbjct: 71  HLHHHFHHFADSSKMGFLATTYHVVFDSLRPRTPDESPMEELEAYKIVFEAYTFGSEQNP 130

Query: 147 YEHSLQEVEVEVDFQEPMAHFPEKIKPLPENSL-IAEVEAKTEELQEAKFENRDEKHEIM 206
           YEHSLQEVEVEVDFQEPM HFPEKIK LPEN L IAEVEAKTEELQEAKFENRDEKHEIM
Sbjct: 131 YEHSLQEVEVEVDFQEPMEHFPEKIKTLPENPLIIAEVEAKTEELQEAKFENRDEKHEIM 190

Query: 207 KDLRKITEESSSSSRSESSPPWSSPGSFNRENSSLGSYGSMRKEKEWRRTLACKLFEERH 266
            DL+    ESSSSSRSESSPPWSSPGSF R+ SSLGSYGSMRKEKEWRRTLACKLFEERH
Sbjct: 191 NDLK----ESSSSSRSESSPPWSSPGSFGRDYSSLGSYGSMRKEKEWRRTLACKLFEERH 250

Query: 267 SSEETEGMDSLWETYEKKEKDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM 326
           SSEETEGMDSLWETYEKKEKD+RKSKK EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM
Sbjct: 251 SSEETEGMDSLWETYEKKEKDNRKSKK-EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM 310

Query: 327 RRPNLMKMTKALKGFGWLSRKGSRKRLIH 344
           RRPNLMKMTKALKGFGWLSRKGSRKRLIH
Sbjct: 311 RRPNLMKMTKALKGFGWLSRKGSRKRLIH 334

[Close]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL
Match: A0A1S4E2S0 (uncharacterized protein LOC103499217 OS=Cucumis melo OX=3656 GN=LOC103499217 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 1.5e-72
Identity = 174/267 (65.17%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 100 TQAFLRPRTPDE----SPMEELEAYKIVFEAYTF-GSEQNPYEHSLQEVEVEVDFQEPMA 159
           TQ FLR RTP+E     P+EELEAYKIVFE YTF GSEQ PY       E+EVDFQEPM 
Sbjct: 2   TQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGD-DNPELEVDFQEPME 61

Query: 160 HFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSP 219
           +FP++ + LP+     E EAKTEE +EA+ ENR+  +E+MKDLRK+ EESS SSR+ESS 
Sbjct: 62  NFPQETQILPD-----ETEAKTEESKEAQIENRE--NEMMKDLRKMAEESSISSRTESS- 121

Query: 220 PWSSPGSFN----RENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYE 279
           PWSSPGSF+      N +LGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYE
Sbjct: 122 PWSSPGSFSSREYNSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYE 181

Query: 280 KKE--------------KDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRR 339
             E              K  +K +K+ ++++EEEE+ EGQLCCLQALKFSAGKMNLGM +
Sbjct: 182 NSESKNLQKKEKMNGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGK 241

Query: 340 PNLMKMTKALKGFGWLSRKGSRKRLIH 344
           PNL+KMTKALKGFGWL+R GSRKRLIH
Sbjct: 242 PNLLKMTKALKGFGWLNRNGSRKRLIH 259

[Close]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL
Match: A0A0A0L955 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G632280 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 4.5e-72
Identity = 177/268 (66.04%), Postives = 206/268 (76.87%), Query Frame = 0


Query: 100 TQAFLRPRTPDE----SPMEELEAYKIVFEAYTF-GSEQNPYEHSLQEVEVEVDFQEPMA 159
           TQAFLR RTP+E     P+EELEAYKIVFE YTF GSEQ PY       E+EVDFQE M 
Sbjct: 2   TQAFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYGGD-DNPELEVDFQESME 61

Query: 160 HFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSP 219
           +FP++ + LP+     E EAKTEE +EA+  NR+  +E+MKDLRK+TEESS SSR+ESS 
Sbjct: 62  NFPQETQILPD-----ETEAKTEESKEAQIGNRE--NEMMKDLRKLTEESSISSRTESS- 121

Query: 220 PWSSPGSFN----RENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYE 279
           PWSSPGSF+      N +LGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYE
Sbjct: 122 PWSSPGSFSSREYNNNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYE 181

Query: 280 --------KKEKDDRKS-------KKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMR 339
                   KKEK + KS       KK ++++EEEE+ E+GQLCCLQALKFSAGKMNLGM 
Sbjct: 182 NSESKNLQKKEKMNGKSTKGKKIQKKTDDDDEEEEDGEQGQLCCLQALKFSAGKMNLGMG 241

Query: 340 RPNLMKMTKALKGFGWLSRKGSRKRLIH 344
           +PNL+KMTKALKGFGWL+R GSRK+LIH
Sbjct: 242 KPNLLKMTKALKGFGWLNRNGSRKKLIH 260

[Close]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL
Match: A0A5D3DQW2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1185G00160 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 171/263 (65.02%), Postives = 200/263 (76.05%), Query Frame = 0


Query: 104 LRPRTPDE----SPMEELEAYKIVFEAYTF-GSEQNPYEHSLQEVEVEVDFQEPMAHFPE 163
           LR RTP+E     P+EELEAYKIVFE YTF GSEQ PY       E+EVDFQEPM +FP+
Sbjct: 15  LRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGD-DNPELEVDFQEPMENFPQ 74

Query: 164 KIKPLPENSLIAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSPPWSS 223
           + + LP+     E EAKTEE +EA+ ENR+  +E+MKDLRK+ EESS SSR+ESS PWSS
Sbjct: 75  ETQILPD-----ETEAKTEESKEAQIENRE--NEMMKDLRKMAEESSISSRTESS-PWSS 134

Query: 224 PGSFN----RENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKE- 283
           PGSF+      N +LGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYE  E 
Sbjct: 135 PGSFSSREYNSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYENSES 194

Query: 284 -------------KDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLM 343
                        K  +K +K+ ++++EEEE+ EGQLCCLQALKFSAGKMNLGM +PNL+
Sbjct: 195 KNLQKKEKMNGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGKPNLL 254

[Close]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL
Match: A0A6J1E4P5 (uncharacterized protein LOC111026037 OS=Momordica charantia OX=3673 GN=LOC111026037 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63
Identity = 160/270 (59.26%), Postives = 197/270 (72.96%), Query Frame = 0


Query: 104 LRPRTPDE------SPM-EELEAYKIVFEAYTFG----SEQNPY---EHSLQEVEVEVDF 163
           LRPRTPDE       P+ EELEAY IVFE YTFG    +E+NPY      + EVEV+VD 
Sbjct: 87  LRPRTPDEVDEFRFRPLEEELEAYNIVFETYTFGIGTEAEENPYGGGHADVPEVEVKVDC 146

Query: 164 QEPMAHFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDE--KHEIMKDLRKITEESSSS 223
           +EP+ +FPE IK LPEN +  E   + E +++ + E R++  ++E M   +   ++SS S
Sbjct: 147 EEPVVNFPETIKILPENPVPYEKTEEKEIIEDLRKELREDSGENEEMIGKQPTDQDSSIS 206

Query: 224 SRSESSPPWSSPGSFNRENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWE 283
           SRSESS PWSSPGSF RE SSLGSYGSMRKEKEWRRTLACKLFEERH++E +EGMDSLWE
Sbjct: 207 SRSESS-PWSSPGSFGREYSSLGSYGSMRKEKEWRRTLACKLFEERHNAEGSEGMDSLWE 266

Query: 284 TYEKKE-KDDRKSKKEEE-------------EEEEEEEEEEGQLCCLQALKFSAGKMNLG 343
           TYEK E K  +K++ +++             +EEE+E+ +EGQLCCLQALKFSAGKMNLG
Sbjct: 267 TYEKSESKQSQKTENQKQKQKLSKAKRGKKFQEEEDEDGDEGQLCCLQALKFSAGKMNLG 326

[Close]

BLAST of CmaCh19G001720 vs. NCBI nr
Match: XP_022963518.1 (uncharacterized protein LOC111463823 [Cucurbita moschata])

HSP 1 Score: 411.8 bits (1057), Expect = 5.9e-111
Identity = 230/269 (85.50%), Postives = 235/269 (87.36%), Query Frame = 0


Query: 87  HPKHHYCRLGNGRTQAF-----------LRPRTPDESPMEELEAYKIVFEAYTFGSEQNP 146
           H  HH+    +     F           LRPRTPDESPMEELEAYKIVFEAYTFGSEQNP
Sbjct: 71  HLHHHFHHFADSSKMGFLATTYHVVFDSLRPRTPDESPMEELEAYKIVFEAYTFGSEQNP 130

Query: 147 YEHSLQEVEVEVDFQEPMAHFPEKIKPLPENSL-IAEVEAKTEELQEAKFENRDEKHEIM 206
           YEHSLQEVEVEVDFQEPM HFPEKIK LPEN L IAEVEAKTEELQEAKFENRDEKHEIM
Sbjct: 131 YEHSLQEVEVEVDFQEPMEHFPEKIKTLPENPLIIAEVEAKTEELQEAKFENRDEKHEIM 190

Query: 207 KDLRKITEESSSSSRSESSPPWSSPGSFNRENSSLGSYGSMRKEKEWRRTLACKLFEERH 266
            DL+    ESSSSSRSESSPPWSSPGSF R+ SSLGSYGSMRKEKEWRRTLACKLFEERH
Sbjct: 191 NDLK----ESSSSSRSESSPPWSSPGSFGRDYSSLGSYGSMRKEKEWRRTLACKLFEERH 250

Query: 267 SSEETEGMDSLWETYEKKEKDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM 326
           SSEETEGMDSLWETYEKKEKD+RKSKK EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM
Sbjct: 251 SSEETEGMDSLWETYEKKEKDNRKSKK-EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGM 310

Query: 327 RRPNLMKMTKALKGFGWLSRKGSRKRLIH 344
           RRPNLMKMTKALKGFGWLSRKGSRKRLIH
Sbjct: 311 RRPNLMKMTKALKGFGWLSRKGSRKRLIH 334

[Close]

BLAST of CmaCh19G001720 vs. NCBI nr
Match: KAG7011337.1 (hypothetical protein SDJN02_26241, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 404.8 bits (1039), Expect = 7.3e-109
Identity = 224/241 (92.95%), Postives = 227/241 (94.19%), Query Frame = 0


Query: 104 LRPRTPDESPMEELEAYKIVFEAYTFGSEQNPYEHSLQEVEVEVDFQEPMAHFPEKIKPL 163
           LRPRTPDESPMEELEAYKIVFEAYTF SEQNPYEHSLQEVEVEVDFQEPM HFPEKIK L
Sbjct: 15  LRPRTPDESPMEELEAYKIVFEAYTFDSEQNPYEHSLQEVEVEVDFQEPMEHFPEKIKTL 74

Query: 164 PENSL-IAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSPPWSSPGSF 223
           PEN L IAEVEAKTEELQEAKF NRDEKHEIM DL+    ESSSSSRSESSPPWSSPGSF
Sbjct: 75  PENPLIIAEVEAKTEELQEAKFVNRDEKHEIMNDLK----ESSSSSRSESSPPWSSPGSF 134

Query: 224 NRENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKEKDDRKSKKE 283
            R+ SSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKEKD+RKSKK 
Sbjct: 135 GRDYSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKEKDNRKSKK- 194

Query: 284 EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLMKMTKALKGFGWLSRKGSRKRLI 343
           EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLMKMTKALKGFGWLSRKGSRKRLI
Sbjct: 195 EEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLMKMTKALKGFGWLSRKGSRKRLI 250

[Close]

BLAST of CmaCh19G001720 vs. NCBI nr
Match: XP_038887002.1 (stress response protein NST1 [Benincasa hispida])

HSP 1 Score: 306.2 bits (783), Expect = 3.5e-79
Identity = 192/305 (62.95%), Postives = 220/305 (72.13%), Query Frame = 0


Query: 87  HPKHHYCRLGNGRTQAF-----------LRPRTPDES-----PMEELEAYKIVFEAYTFG 146
           H  HH+ ++ +     F           LRPRTP+E+     PMEELEAYKIVFE YTFG
Sbjct: 80  HLHHHFHQVSDSSKMGFLATTYQVVFDSLRPRTPEETDGFSPPMEELEAYKIVFETYTFG 139

Query: 147 SEQNPY-EHSLQEVEVEVDFQEPMAHFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDE 206
           SEQ PY +    EVEVE DFQEPM +FPE+I+ L EN L+  +E KTEEL+EA+ EN DE
Sbjct: 140 SEQTPYGDDDDPEVEVEADFQEPMENFPEEIQILQENPLLVGIETKTEELKEAQIENGDE 199

Query: 207 ----------------KHEIMKDLRKITEESSSSSRSESSPPWSSPGSF-NRENSSLGSY 266
                           ++E+MKDLRKITEESS SSR+ESS PWSSPGSF +RE +SLGSY
Sbjct: 200 NRDVSRDETRDSSKAMENEMMKDLRKITEESSISSRTESS-PWSSPGSFSSREYNSLGSY 259

Query: 267 GSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYEKKEKDD-----------RKSKK 326
           GSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYEK E              +K KK
Sbjct: 260 GSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYEKSESKKLQKEVKINGKLKKGKK 319

Query: 327 --EEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRRPNLMKMTKALKGFGWLSRKGSRK 344
             ++EEE+EEEE+ EGQLCCLQALKFSAGKMNLGM RPNL+KMTKALKGFGWLSR GSR+
Sbjct: 320 IQKKEEEDEEEEDGEGQLCCLQALKFSAGKMNLGMGRPNLLKMTKALKGFGWLSRNGSRR 379

[Close]

BLAST of CmaCh19G001720 vs. NCBI nr
Match: KAG7036245.1 (hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 284.6 bits (727), Expect = 1.1e-72
Identity = 182/271 (67.16%), Postives = 206/271 (76.01%), Query Frame = 0


Query: 104 LRPRTPDE----SPMEELEAYKIVFEAYTFGSEQNPY-----EHSLQEVEVEVDFQEPMA 163
           LRPRTP+E     PMEELEAYKIVFE YTFG+EQN Y     E ++ EVEVEVD +E M 
Sbjct: 104 LRPRTPEEIDEFRPMEELEAYKIVFETYTFGTEQNLYGGEDSELNVPEVEVEVDCEESME 163

Query: 164 HFPEKIKPLPENSLIAEVEAKT---EELQEAKFENRDE----KHEIMKDLRKITEESSSS 223
           +FP K++  PEN L  E EAKT   EE  E K E RD     ++E+MK+LRK+TEESS S
Sbjct: 164 NFPGKMEFSPENPLAYENEAKTGECEEKNEKKEEIRDSSKAIENEMMKELRKLTEESSIS 223

Query: 224 SRSESSPPWSSPGSFNRENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWE 283
           SRSESS PWSSPGSF+R+  SLGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWE
Sbjct: 224 SRSESS-PWSSPGSFSRD-YSLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWE 283

Query: 284 TYE--------KKEKDDRKSK-------KEEEEEEEEEEEEEGQLCCLQALKFSAGKMNL 343
           TYE        K EK + KSK       KEE+E+E+E E+ EGQLCCLQALKFSAGKMNL
Sbjct: 284 TYEKSEWNTLQKNEKINGKSKKGKKIKGKEEDEDEDEYEDREGQLCCLQALKFSAGKMNL 343

[Close]

BLAST of CmaCh19G001720 vs. NCBI nr
Match: XP_016902526.1 (PREDICTED: uncharacterized protein LOC103499217 [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 3.2e-72
Identity = 174/267 (65.17%), Postives = 203/267 (76.03%), Query Frame = 0


Query: 100 TQAFLRPRTPDE----SPMEELEAYKIVFEAYTF-GSEQNPYEHSLQEVEVEVDFQEPMA 159
           TQ FLR RTP+E     P+EELEAYKIVFE YTF GSEQ PY       E+EVDFQEPM 
Sbjct: 2   TQPFLRTRTPEEIHGFPPIEELEAYKIVFETYTFGGSEQIPYRGD-DNPELEVDFQEPME 61

Query: 160 HFPEKIKPLPENSLIAEVEAKTEELQEAKFENRDEKHEIMKDLRKITEESSSSSRSESSP 219
           +FP++ + LP+     E EAKTEE +EA+ ENR+  +E+MKDLRK+ EESS SSR+ESS 
Sbjct: 62  NFPQETQILPD-----ETEAKTEESKEAQIENRE--NEMMKDLRKMAEESSISSRTESS- 121

Query: 220 PWSSPGSFN----RENSSLGSYGSMRKEKEWRRTLACKLFEERHSSEETEGMDSLWETYE 279
           PWSSPGSF+      N +LGSYGSMRKEKEWRRTLACKLFEERH+SE TEGMDSLWETYE
Sbjct: 122 PWSSPGSFSSREYNSNYTLGSYGSMRKEKEWRRTLACKLFEERHNSEGTEGMDSLWETYE 181

Query: 280 KKE--------------KDDRKSKKEEEEEEEEEEEEEGQLCCLQALKFSAGKMNLGMRR 339
             E              K  +K +K+ ++++EEEE+ EGQLCCLQALKFSAGKMNLGM +
Sbjct: 182 NSESKNLQKKEKMNGKLKKGKKIQKKTDDDDEEEEDGEGQLCCLQALKFSAGKMNLGMGK 241

Query: 340 PNLMKMTKALKGFGWLSRKGSRKRLIH 344
           PNL+KMTKALKGFGWL+R GSRKRLIH
Sbjct: 242 PNLLKMTKALKGFGWLNRNGSRKRLIH 259

[Close]

BLAST of CmaCh19G001720 vs. TAIR 10
Match: AT3G25130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; Has 3885 Blast hits to 2658 proteins in 280 species: Archae - 12; Bacteria - 208; Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11; Other Eukaryotes - 2314 (source: NCBI BLink). )

HSP 1 Score: 117.5 bits (293), Expect = 2.2e-26
Identity = 111/290 (38.28%), Postives = 155/290 (53.45%), Query Frame = 0


Query: 114 MEELEAYKIVFEA---------------YTFGSEQNPYEHSLQEVEVEVDFQEPMAHFPE 173
           +EELEAYK+V EA                TF  +   +E ++ E   +   +E +     
Sbjct: 121 LEELEAYKMVVEACSMECASENEICSDELTFVDKFCSHESTVSESLTDETLEEQV----- 180

Query: 174 KIKPLP-ENSLIAEVEAKT-----EELQEAK--------FENRDEKHEIMKDLRKITEES 233
           +I+PL  E+ ++ E E +T     EE++E K         +NR+E  +     +K+    
Sbjct: 181 EIQPLKFEDVIVLEKEEETKKCEKEEVEEQKVKHKSDVVLDNREEPTKEESKAQKVDLVG 240

Query: 234 SSSSRSESSPPWSS-----PGSFN-------RENSSLGSYGSMRKEKEWRRTLACKLFEE 293
            S++ S   P  S+      G  N        +N SL S+GSMRKEKEWRRTLACKLFEE
Sbjct: 241 DSNNESYDLPKLSNFLGEGEGKRNVVTKNEEEDNVSLQSFGSMRKEKEWRRTLACKLFEE 300

Query: 294 RHSSEETEGMDSLWETYE-----------------KKEKDDRKSKKEEEEEEEEEEEEEG 340
           RH+++  +GMD LWETYE                 KK K   K+K  E+E   EEE+++G
Sbjct: 301 RHNADVGQGMDQLWETYETQTEKKQQTEEEKKKLKKKTKSMMKTKSIEKEVIVEEEDDDG 360

[Close]

BLAST of CmaCh19G001720 vs. TAIR 10
Match: AT3G07230.1 (wound-responsive protein-related )

HSP 1 Score: 55.5 bits (132), Expect = 1.0e-07
Identity = 31/44 (70.45%), Postives = 38/44 (86.36%), Query Frame = 0


Query: 1  MIYDVNSHLFRSFLSQKGGGAYDKRKIEEQKPKEQRFKANENKP 45
          MIYDVNS LFRSFLSQKG  + DKRK+E+ KP+EQ+ KA++NKP
Sbjct: 1  MIYDVNSGLFRSFLSQKGSSS-DKRKMED-KPREQKPKASDNKP 42

The following BLAST results are available for this feature:

BLAST of CmaCh19G001720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09020	1.0e-09	81.82	Wound-induced basic protein OS=Phaseolus vulgaris OX=3885 GN=PR4 PE=2 SV=1	[more]

BLAST of CmaCh19G001720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HI04	2.9e-111	85.50	uncharacterized protein LOC111463823 OS=Cucurbita moschata OX=3662 GN=LOC1114638...	[more]
A0A1S4E2S0	1.5e-72	65.17	uncharacterized protein LOC103499217 OS=Cucumis melo OX=3656 GN=LOC103499217 PE=...	[more]
A0A0A0L955	4.5e-72	66.04	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G632280 PE=4 SV=1	[more]
A0A5D3DQW2	1.4e-70	65.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A6J1E4P5	3.8e-63	59.26	uncharacterized protein LOC111026037 OS=Momordica charantia OX=3673 GN=LOC111026...	[more]

BLAST of CmaCh19G001720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963518.1	5.9e-111	85.50	uncharacterized protein LOC111463823 [Cucurbita moschata]	[more]
KAG7011337.1	7.3e-109	92.95	hypothetical protein SDJN02_26241, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038887002.1	3.5e-79	62.95	stress response protein NST1 [Benincasa hispida]	[more]
KAG7036245.1	1.1e-72	67.16	hypothetical protein SDJN02_03047, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_016902526.1	3.2e-72	65.17	PREDICTED: uncharacterized protein LOC103499217 [Cucumis melo]	[more]

BLAST of CmaCh19G001720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25130.1	2.2e-26	38.28	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G07230.1	1.0e-07	70.45	wound-responsive protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 165..192
None	No IPR available	COILS	Coil	Coil	coord: 269..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..295
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..233
None	No IPR available	PANTHER	PTHR36760	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY B PROTEIN	coord: 171..340
None	No IPR available	PANTHER	PTHR36760:SF1	ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 FAMILY B PROTEIN	coord: 171..340
IPR012643	Wound-inducible basic	PFAM	PF08186	Wound_ind	coord: 1..44 e-value: 5.6E-14 score: 52.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001720.1	CmaCh19G001720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane