CmaCh19G001690 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001690
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase RNF4-like
Location	Cma_Chr19: 1130660 .. 1134132 (+)
RNA-Seq Expression	CmaCh19G001690
Synteny	CmaCh19G001690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAAGAACCAAGCAACACACGTGTGACGCAATTATTGTCAATGCAAGAACCCTGGAGCTTCCTCTCTGCCGTGTCTAGATTTTCATTTCCAATCCCCAGCCCTTTCTCCATTTCTCTCTTTGTAATGGCTATTTTCCCCTCTCTTCACCTTCCACCTCTCAGCCCTTCGAACCCTAATTACAAATATCACAAATCTGCGAGGTAATCATCCTCTTCAATACATTTTTTTTCTGATCTAATCTATTCTATATATCACCATAAAATTTCAAGATATTTGCTAGCAAGTGTGGTATCGCTTCATCAACCGATTATTTCAGGTACACAGTCTCGGAAGAATTTTGTAATTTTTTTTTAATTGTGTATTGTATATTGATTTAGTGATGATCTTTGTTTTTTTTTTTTTTAAATAAATTGTTTTTGTGAATGCTGTCTTGAAGAATTGAGGTTGAGGTTTTGGTTTGTGGAGTTGGGGCAAAAAAAATTCGATATTTGGATATGGATTTTGATGATCGGGTGAATTTTGTAGTTTATTGTTAGGAATTGTGTGGTTTATTGTTAGTGTTATGATTAATTATAGGGTTTAATGTAATTGAATCGTGGGGTAACTGATTTGGAGATTTTCTGTCATGAATGTTTAGGGGAGAAGGTATTGGTAGATTGAAGGTATTGGTAGATTGAAGGGGCGGGTTTTGTGTATAAAGTTTCCTTAGTGTTTTCGTATCCAAGCTTCTCAGCTTGTATTTGAATGGTGGTGATGGTTCTTGTGTTGGCTTGTGGGAAGCTATCAATTTCTTTCTGAAATTTTACAGTGCATGTTGGCAGGTTGTTGAGGAGCTTCTAACTATAGATGAGTACTCGGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCAGGGGGAGACGTCTCAATTTGGATTTCAGGAGGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTTATTGAATCATCCGCTAGAGCTTTTGCTGAAGTATGCTTCCTCTGGCCTCTATATTGTTTTGTACTTATGATTCTTCTATCCATATTATGTTCCTGTTCTATTGATTCTGATCTGTTTTTCATGGAATCCATCGATTATCTGTCAGGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAACATAGTTGATGTCGATGCAGGTATGTTCATTTGAGCTTGTGGAGGACTATAGCTAGGTTGATTTTTTTCGTATTACTTTTCTTCCTTTGGATCTTTATTGAGATTTCTTCTTAAGCTTAGCATCCGTTAGTTAGACCTATTCTCTCACTGATTTTTGGACTACCTTGTACTCCTGTCTAGAGCATGCAGTGTCTAGAGCATGCAAGCAAGAGTAAGGAATTGAAGAGTTATTTTTGTTCGATCCATACATTTTCCCAAAATATGCCTTTATATCAAATTATCCCATCTAAGGGTCGAAGCTAATTATTATGATAGTTTTTAGCTTGGAGATTCGTAACCACGGTCTACAATCGCATGTTTAGAATTTTCCTTTAGCAAACCACCATAATTCTTCCATTGCATGCTATTTTGCAATGACATGACTTTATGCCACATGGCACCATTCACTGAAAAGAAAGAAGACCTTAGTTGAACTTATTTTGGAGGTAATATGTTACTAGTATTCTCTCTAATCTTGAGGACATATCCCTTGCATAGCTCGCAGGAATATGTAGCCATCATAGCTCATGAATGGGGTTAAACCTTTTCATTGCTGCTTAAAACAGAGGCCTCCCAATTCTTTGAGATCTGTCATTAGAAGCTTCATGAAATCGGTTCTTCCTTGATTACCAGCTCGGCTATAAGTTCCGATCATTCCGTGGGAAGGATCAGACCACATAACTGGCTGGTTAGCTATTAGGTTAGCTATTAGGACTTGTTTGGAATGCAAGGGGCGTCAGCAATGGCTGCTTCCAAGTTTCCAACTGATATGGACCTTGTGGGCAAGTAACTGTAGATGTTTATTATCTATGTTTATGGTCGTACCATCTTTGGACTGTATTCCACTAGAACCTCTTGTCCATTTGTTGTGAAGCTTGCATCTCTCATTCTCTCATCTTCTAATTGTTGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCAAATCAACAAACTGTAAATTCTGATTTATTGATCAATTTGGAAGCCAGCAACAGCTCTATGGTACTGGGACAATTTATATCTTCATTACTCTTATTTTTGCGCAATTTTTTCTCGTGGTGTTACTCCTTAGGTATAGTGTATATTATATAATTGTCTTTATGATACCCCCGTACAAGCACACATGTGGAATTGAGGAATTTTCATGGCATGAGATAAGGACTTAGGAAGACAGAAAATGGTGCACTTCGTATTTGGCAAAACTCAGTGCATAGGCATAACAAAGGTGTATTTGAACAAATATGTTCTCTGTAACAACCCAGGCTCAACGCTAGCAGATATTGTCCTCTTTGGGTTTTCCCTTTCGGGCTTCCTCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCTAGACCCTTATAAGTGGTGGTTTGTTCTCCTCCCCAACCAATGAGGGACATCACACCGACCAAGTTTCGTCTGATGCCATCGGAAGGGTGATTTTAGTTTGTGTTTGATCCATGAGTTTCTACAGAGCTCTCTCTCTCATGTTCCTTGTGTTTGGTAACTTTTCTCCCTCTGGGAAAAGTTAAGTTAGTTTGTTTATGGTTTCTTTTGAATAATCTCTCTCTCTCTCTCGCACTTTGTTTGGATGATGCTCTGTCCTTCGGTTGATTTCTCTTAAAAGTTAGGGTCTGTTCATAGTTCGAACCGATTTTGCTTATCGCTTAACCGAGAACCAAACCATACATTTTGGTTTGATTTCATTTGAAAAAAGTGAATTATAGATGAGTTTGAGCAAAATAATTGAAAGTTAAACCAAAGAGTCCCTTCATTAGATCTAATTGTCCCTAGGTTTAATGTCGTCCTTGTGACTGAACTCGTGGTGGTCTTTATATGTAGTCGGCTCCAATAATGCAATTCCAGGAGGAGTCGGTTTCTTATTTGCTGTTAGTATTGAAATACGAGTATAGGGTTGAAAATGGGATGATGATGCGATTTCTGTGGTTTTTGCAGAAAGAGAAGGCTGCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGACCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGTAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

mRNA sequence

AAGGAAGAACCAAGCAACACACGTGTGACGCAATTATTGTCAATGCAAGAACCCTGGAGCTTCCTCTCTGCCGTGTCTAGATTTTCATTTCCAATCCCCAGCCCTTTCTCCATTTCTCTCTTTGTAATGGCTATTTTCCCCTCTCTTCACCTTCCACCTCTCAGCCCTTCGAACCCTAATTACAAATATCACAAATCTGCGAGGTAATCATCCTCTTCAATACATTTTTTTTCTGATCTAATCTATTCTATATATCACCATAAAATTTCAAGATATTTGCTAGCAAGTGTGGTATCGCTTCATCAACCGATTATTTCAGGTTGTTGAGGAGCTTCTAACTATAGATGAGTACTCGGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCAGGGGGAGACGTCTCAATTTGGATTTCAGGAGGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTTATTGAATCATCCGCTAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAACATAGTTGATGTCGATGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCAAATCAACAAACTGTAAATTCTGATTTATTGATCAATTTGGAAGCCAGCAACAGCTCTATGAAAGAGAAGGCTGCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGACCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGTAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Coding sequence (CDS)

ATGAGTACTCGGGCAATGAGAGGACATACTGCAAGAGGTTATCATCGTAGGAAATCATTGGACTTGGACCTAAACAGCATGCCACCAACTGAGAACCGAGATCAGGGGGAGACGTCTCAATTTGGATTTCAGGAGGCACAAGTTAATCAACAACAGTCTGTACAGCCTGCAATGATCGACATTGAGGCCATTGATGACGATGTTATTGAATCATCCGCTAGAGCTTTTGCTGAAGCTAAAAATAAATCCAGACGGAATGCTAGGAAGAACATAGTTGATGTCGATGCAGAAGAGCGGAGCAGGGCGTCAAATAATAACCGGAGCAAGCGTAGGAGGGATGTGCCAAATCAACAAACTGTAAATTCTGATTTATTGATCAATTTGGAAGCCAGCAACAGCTCTATGAAAGAGAAGGCTGCTCCACCGAAGGAGCCCAATTTCAGTTGTCCAATATGCATGGGACCGTTGGTAGAAGAAACATCAACAAGGTGTGGTCATATTTTCTGTAAGGCATGCATCAAGACTGCAATAGCCGTCCAGAGTAAATGCCCAACCTGTAGGAAAAGAGTAACTGCCAAAGAACTGATTAGAGTATTCCTTCCTGGGACAAGCTTGGAGTGA

Protein sequence

MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGTSLE

Homology

[Close]

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot
Match: Q9CQ29 (RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.3e-07
Identity = 26/59 (44.07%), Postives = 34/59 (57.63%), Query Frame = 0


Query: 140 APPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRV 199
           A P +  F C +C G L   T   C HIFCK CI   +A Q+ CP CRK VT ++++ V
Sbjct: 11  ASPPDCKFLCSVCHGVLKRPTRLPCSHIFCKKCIFRWLARQNTCPCCRKEVTRRKMVEV 69

[Close]

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot
Match: Q9QZS2 (E3 ubiquitin-protein ligase RNF4 OS=Mus musculus OX=10090 GN=Rnf4 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.9e-06
Identity = 43/165 (26.06%), Postives = 70/165 (42.42%), Query Frame = 0


Query: 52  QSVQPAMIDIEAIDDDVIESSARAFAEAKNKSRRNARK--------NIVDVDAEERSRAS 111
           +S++P ++D+   D  VI        E + + RRN R+         +V  D EE SR  
Sbjct: 56  ESLEPVVVDLTHNDSVVI-------VEERRRPRRNGRRLRQDHADSCVVSSDDEELSR-- 115

Query: 112 NNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPK-EPNFSCPICMGPLVE---- 171
                            + D+ +      S+  + A  P+     SCPICM    E    
Sbjct: 116 -----------------DKDVYVTTHTPRSTKDDGATGPRPSGTVSCPICMDGYSEIVQN 175

Query: 172 ---ETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFL 201
                ST CGH+FC  C++ ++   + CPTCRK++  K    +++
Sbjct: 176 GRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRYHPIYI 194

[Close]

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot
Match: E7FDW2 (E3 ubiquitin-protein ligase PDZRN3-B OS=Danio rerio OX=7955 GN=pdzrn3b PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 21/55 (38.18%), Postives = 32/55 (58.18%), Query Frame = 0


Query: 144 EPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRV 199
           +P+F C +C   L +  +T CGH+FC  C+   +  QS CP   +R++ KEL  V
Sbjct: 13  DPDFKCNLCNKVLEDPLTTPCGHVFCAGCVLPWVVQQSSCPVKCQRISTKELNHV 67

[Close]

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot
Match: Q32NQ8 (RING finger protein 10 OS=Xenopus laevis OX=8355 GN=rnf10 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-05
Identity = 26/62 (41.94%), Postives = 33/62 (53.23%), Query Frame = 0


Query: 148 SCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ----SKCPTCRKRVTAKELIRVFLPGT 206
           SCPIC+ P V    TRCGHIFC  CI   +++     S+CP C   +  K+L  V    T
Sbjct: 205 SCPICLYPPVAAKITRCGHIFCWPCILHYLSLSEKDWSRCPICYSSIIKKDLKSVVATET 264

[Close]

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot
Match: Q9FF61 (Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 OS=Arabidopsis thaliana OX=3702 GN=At5g05130 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 2.7e-05
Identity = 23/51 (45.10%), Postives = 30/51 (58.82%), Query Frame = 0


Query: 146 NFSCPICMGPLVEETSTRCGHIFCKACI-KTAIAVQSKCPTCRKRVTAKEL 196
           +F CPIC+ P      TRC HIFC+ACI +T    +  CP CR  +T  +L
Sbjct: 632 DFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSDL 682

[Close]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL
Match: A0A6J1HQI7 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC111466888 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 4.4e-107
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID
Sbjct: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
Sbjct: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL
Match: A0A6J1HFU4 (E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463920 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGF EAQVNQQQSVQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
Sbjct: 121 NSDLLINLEGSNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL
Match: A0A1S3CCB4 (E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 2.3e-95
Identity = 185/206 (89.81%), Postives = 192/206 (93.20%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQ   Q+AQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDAEERSR SNNNRSKRRRDV N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDAEERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLEASNSSMK K APPKEP FSCPICMGPLVEETST+CGHIFCKACI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL
Match: A0A6J1E010 (E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111024653 PE=4 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 1.2e-93
Identity = 184/206 (89.32%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRG TARGYHRRKSLDLDLNSMPP+ENRDQGE SQ G QEA  NQQQ +QP MID
Sbjct: 1   MSTQAMRGTTARGYHRRKSLDLDLNSMPPSENRDQGEPSQLGLQEAHSNQQQPLQPTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSR SNN RSKRRR+V NQ+TV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRVSNNIRSKRRREVSNQRTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NS+LLINLEASNSS+KEK  PPKEP FSCPICMGPLVEETSTRCGHIFCKACIK AIAVQ
Sbjct: 121 NSNLLINLEASNSSLKEKPVPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIKAAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL
Match: A0A1S3CBW2 (E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499213 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.6e-93
Identity = 184/206 (89.32%), Postives = 191/206 (92.72%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGH  RGYHRRKSLDLDLNSMPPTENRDQGETSQ   Q+AQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHNTRGYHRRKSLDLDLNSMPPTENRDQGETSQLRLQDAQVNQQQPVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKN+VDVDA ERSR SNNNRSKRRRDV N+ +V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNVVDVDA-ERSRVSNNNRSKRRRDVSNRPSV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLEASNSSMK K APPKEP FSCPICMGPLVEETST+CGHIFCKACI+ AI VQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTKCGHIFCKACIRAAIGVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 205

[Close]

BLAST of CmaCh19G001690 vs. NCBI nr
Match: XP_022967334.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967336.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967337.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967338.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967339.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima])

HSP 1 Score: 397.1 bits (1019), Expect = 9.1e-107
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID
Sbjct: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
Sbjct: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. NCBI nr
Match: XP_022963653.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963654.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963655.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963656.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963657.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 3.8e-105
Identity = 203/206 (98.54%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGF EAQVNQQQSVQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
Sbjct: 121 NSDLLINLEGSNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. NCBI nr
Match: XP_023554040.1 (E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554041.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554043.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554044.1 E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 390.6 bits (1002), Expect = 8.5e-105
Identity = 202/206 (98.06%), Postives = 204/206 (99.03%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRD GETSQFGFQEAQVNQQQSVQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDPGETSQFGFQEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLE SNSSMKEKA+PPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ
Sbjct: 121 NSDLLINLEGSNSSMKEKASPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           SKCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. NCBI nr
Match: KAG7011333.1 (RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 369.8 bits (948), Expect = 1.6e-98
Identity = 202/249 (81.12%), Postives = 204/249 (81.93%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGF EAQVNQQQSVQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFPEAQVNQQQSVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAE----------------------- 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDA+                       
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDADGGLEFFGSDHITGWLAIRTCLEC 120

Query: 121 --------------------ERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKE 180
                               ERSRASNNNRSKRRRDVPNQQTVNSDLLINLE SNSSMKE
Sbjct: 121 KGRQQWLLPSFQLIWTLWAKERSRASNNNRSKRRRDVPNQQTVNSDLLINLEGSNSSMKE 180

Query: 181 KAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIR 207
           KAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIR
Sbjct: 181 KAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIR 240

[Close]

BLAST of CmaCh19G001690 vs. NCBI nr
Match: XP_038888129.1 (E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888131.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888132.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888133.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888134.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888135.1 E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida])

HSP 1 Score: 364.8 bits (935), Expect = 5.0e-97
Identity = 190/206 (92.23%), Postives = 195/206 (94.66%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           MST+AMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQ  FQEAQVNQQQ VQPAMID
Sbjct: 1   MSTQAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQLRFQEAQVNQQQHVQPAMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEERSRASNNNRSKRRRDVPNQQTV 120
           IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEE ++ SNNNRSKRRRDV NQQ V
Sbjct: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKNIVDVDAEEWTKVSNNNRSKRRRDVSNQQPV 120

Query: 121 NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKACIKTAIAVQ 180
           NSDLLINLEASNSSMK K APPKEP FSCPICMGPLVEETSTRCGHIFCKACI+ AIAVQ
Sbjct: 121 NSDLLINLEASNSSMKVKPAPPKEPKFSCPICMGPLVEETSTRCGHIFCKACIRAAIAVQ 180

Query: 181 SKCPTCRKRVTAKELIRVFLPGTSLE 207
           +KCPTCRKRVTAKELIRVFLPGTSLE
Sbjct: 181 NKCPTCRKRVTAKELIRVFLPGTSLE 206

[Close]

BLAST of CmaCh19G001690 vs. TAIR 10
Match: AT5G48655.2 (RING/U-box superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-39
Identity = 103/211 (48.82%), Postives = 139/211 (65.88%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P  +   +G ++        +   Q   P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVDQ---EGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERSRASNNNRSKRRRDVPNQQ 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +KRRR +P+ +
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRR-IPSSE 120

Query: 121 TV------NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKAC 180
           +V      + +  +N+ +  S  K  A PP+EP F+CPICM P  EE ST+CGHIFCK C
Sbjct: 121 SVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGC 180

Query: 181 IKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           IK AI+ Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 IKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of CmaCh19G001690 vs. TAIR 10
Match: AT5G48655.1 (RING/U-box superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-39
Identity = 103/211 (48.82%), Postives = 139/211 (65.88%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P  +   +G ++        +   Q   P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVDQ---EGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERSRASNNNRSKRRRDVPNQQ 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +KRRR +P+ +
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRR-IPSSE 120

Query: 121 TV------NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKAC 180
           +V      + +  +N+ +  S  K  A PP+EP F+CPICM P  EE ST+CGHIFCK C
Sbjct: 121 SVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGC 180

Query: 181 IKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           IK AI+ Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 IKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of CmaCh19G001690 vs. TAIR 10
Match: AT5G48655.3 (RING/U-box superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 3.0e-39
Identity = 103/211 (48.82%), Postives = 139/211 (65.88%), Query Frame = 0


Query: 1   MSTRAMRGHTARGYHRRKSLDLDLNSMPPTENRDQGETSQFGFQEAQVNQQQSVQPAMID 60
           M+T  +R    RG  RRK++ +DLN++P  +   +G ++        +   Q   P MID
Sbjct: 1   MNTSEVR--VPRGNRRRKAV-IDLNAVPVDQ---EGTSASVRTLTVPITPSQPA-PTMID 60

Query: 61  IEAIDDDVIESSARAFAEAKNKSRRNARKN--IVDVDAEERSRASNNNRSKRRRDVPNQQ 120
           ++AI+DDVIESSA AFAEAK+KS RNAR+   +VDV++   +R   N  +KRRR +P+ +
Sbjct: 61  VDAIEDDVIESSASAFAEAKSKS-RNARRRPLMVDVESGGTTRFPANISNKRRR-IPSSE 120

Query: 121 TV------NSDLLINLEASNSSMKEKAAPPKEPNFSCPICMGPLVEETSTRCGHIFCKAC 180
           +V      + +  +N+ +  S  K  A PP+EP F+CPICM P  EE ST+CGHIFCK C
Sbjct: 121 SVIDCEHASVNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGC 180

Query: 181 IKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           IK AI+ Q KCPTCRK+VTAKELIRVFLP T
Sbjct: 181 IKMAISRQGKCPTCRKKVTAKELIRVFLPTT 202

[Close]

BLAST of CmaCh19G001690 vs. TAIR 10
Match: AT3G07200.1 (RING/U-box superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-31
Identity = 87/176 (49.43%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 30  TENRDQGETSQFGFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNA 89
           T+N  QG+  Q    +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+A
Sbjct: 19  TQNEHQGD--QQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS-RSA 78

Query: 90  RKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPKEPNF 149
           R+    VD E    ++  NRS RRR   +Q +V+S   + L     S K  A P +EP F
Sbjct: 79  RRGSQVVDVE----SAGANRSTRRRS--DQTSVDS---VELNKPRKS-KAVAPPVEEPKF 138

Query: 150 SCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           SCPIC+ P  +E ST+CGHIFCK CIK A+++Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 139 SCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

[Close]

BLAST of CmaCh19G001690 vs. TAIR 10
Match: AT3G07200.2 (RING/U-box superfamily protein )

HSP 1 Score: 132.5 bits (332), Expect = 3.9e-31
Identity = 87/176 (49.43%), Postives = 114/176 (64.77%), Query Frame = 0


Query: 30  TENRDQGETSQFGFQEAQVNQQQSVQPAMIDIEAI--DDDVIESSARAFAEAKNKSRRNA 89
           T+N  QG+  Q    +A    Q    P  I++ AI  DDDV+ES+A AFA+AKNKS R+A
Sbjct: 19  TQNEHQGD--QQVADQAPTVPQIVATPPRINVVAIEDDDDVVESTASAFAQAKNKS-RSA 78

Query: 90  RKNIVDVDAEERSRASNNNRSKRRRDVPNQQTVNSDLLINLEASNSSMKEKAAPPKEPNF 149
           R+    VD E    ++  NRS RRR   +Q +V+S   + L     S K  A P +EP F
Sbjct: 79  RRGSQVVDVE----SAGANRSTRRRS--DQTSVDS---VELNKPRKS-KAVAPPVEEPKF 138

Query: 150 SCPICMGPLVEETSTRCGHIFCKACIKTAIAVQSKCPTCRKRVTAKELIRVFLPGT 204
           SCPIC+ P  +E ST+CGHIFCK CIK A+++Q+KCPTCRK++T K+LIRVFLP T
Sbjct: 139 SCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDLIRVFLPTT 181

The following BLAST results are available for this feature:

BLAST of CmaCh19G001690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CQ29	1.3e-07	44.07	RING finger protein 151 OS=Mus musculus OX=10090 GN=Rnf151 PE=1 SV=1	[more]
Q9QZS2	1.9e-06	26.06	E3 ubiquitin-protein ligase RNF4 OS=Mus musculus OX=10090 GN=Rnf4 PE=1 SV=1	[more]
E7FDW2	1.6e-05	38.18	E3 ubiquitin-protein ligase PDZRN3-B OS=Danio rerio OX=7955 GN=pdzrn3b PE=1 SV=1	[more]
Q32NQ8	2.7e-05	41.94	RING finger protein 10 OS=Xenopus laevis OX=8355 GN=rnf10 PE=2 SV=1	[more]
Q9FF61	2.7e-05	45.10	Putative SWI/SNF-related matrix-associated actin-dependent regulator of chromati...	[more]

BLAST of CmaCh19G001690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQI7	4.4e-107	100.00	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita maxima OX=3661 GN=LOC11146688...	[more]
A0A6J1HFU4	1.8e-105	98.54	E3 ubiquitin-protein ligase RNF4-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A1S3CCB4	2.3e-95	89.81	E3 ubiquitin-protein ligase RNF4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A6J1E010	1.2e-93	89.32	E3 ubiquitin-protein ligase RNF4 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A1S3CBW2	1.6e-93	89.32	E3 ubiquitin-protein ligase RNF4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]

BLAST of CmaCh19G001690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967334.1	9.1e-107	100.00	E3 ubiquitin-protein ligase RNF4-like [Cucurbita maxima] >XP_022967335.1 E3 ubiq...	[more]
XP_022963653.1	3.8e-105	98.54	E3 ubiquitin-protein ligase RNF4-like [Cucurbita moschata] >XP_022963654.1 E3 ub...	[more]
XP_023554040.1	8.5e-105	98.06	E3 ubiquitin-protein ligase RNF4-like [Cucurbita pepo subsp. pepo] >XP_023554041...	[more]
KAG7011333.1	1.6e-98	81.12	RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_038888129.1	5.0e-97	92.23	E3 ubiquitin-protein ligase RNF4-like [Benincasa hispida] >XP_038888130.1 E3 ubi...	[more]

BLAST of CmaCh19G001690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G48655.2	3.0e-39	48.82	RING/U-box superfamily protein	[more]
AT5G48655.1	3.0e-39	48.82	RING/U-box superfamily protein	[more]
AT5G48655.3	3.0e-39	48.82	RING/U-box superfamily protein	[more]
AT3G07200.1	3.9e-31	49.43	RING/U-box superfamily protein	[more]
AT3G07200.2	3.9e-31	49.43	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 149..186 e-value: 6.9E-5 score: 32.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 149..187 score: 12.533537
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 129..201 e-value: 1.4E-17 score: 64.9
None	No IPR available	PFAM	PF13923	zf-C3HC4_2	coord: 149..186 e-value: 8.6E-10 score: 38.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..53
None	No IPR available	PANTHER	PTHR47094	ELFLESS, ISOFORM B	coord: 1..204
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 144..193
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 164..173

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001690.1	CmaCh19G001690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding