CmaCh19G001670 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001670
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Poly(A)-specific ribonuclease
Location	Cma_Chr19: 1119267 .. 1120153 (-)
RNA-Seq Expression	CmaCh19G001670
Synteny	CmaCh19G001670

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCACTGTTTATCAGAATTTCCAATTGTGGCTATGGATACTGAGTTTCCAGGTAAAAATCAAACTTGAAGGATGGTGAGAAGTAGTGATTTTTTAGTCTTTGTTTTACTGACTCTTGAAATCTTTTTAGTCTTTGTTGTACTGACGTTTGAATGTATCTCCTCTTTTTAGGATTTTTAAGATGTACTCCCAAAGGTGTTTCAGATGAAGAATTCTACCAATGCCTCCAATTTAACGTAAATCGACTGAGCATACTCCAGTTAGGACTCACACTTACCGATGAGAATGGAAGAATAGGAATGACGTGGGAGTTTAACTTTCAAGATTTTGATAAAATTAGTAATATGGAGGGTGTTTATTCACTCGATTCATTTCTAAAGAATAAGGGATTTAATTTCAATATCCTGAGGAGCTGTGGAATTTCTCCCGAAGAATTTCGTAGACAATTTAACCCTATCCTTCGAAGCGGTAGAATACAAAGATGGATAACATTTCATGGATTGTATGACATCGCCTATTTGATGAAGTTTACCAACATAATATGCATGCCTACGTCCATGTCTAACTTCGCCATCATGGCTGCACATCTATTAGGAACCGTCACCGACCTGAAACATATGGCTCGGTACTCCGACTACCTACTCAATGGCAACCTAGGCTTAAAAAAACTGGCGAAGATGCTGCAAGTTAATCGCATTGGTACTGCCCACTTTGCTGGGTCTGACAGTTTGCTTACAGCATCAGTTTATGCCAAGATGAGGGTAATTATGAAGGTTGATCCAAAGATACACGAAGGTTTTTTATATGGATTACCATATCCAATTCAGGGTTACCGACCACCAGTTGTAATTGTAGATCCAAAGTTAACCCACAATCGTATCTAA

mRNA sequence

ATGAAGCACTGTTTATCAGAATTTCCAATTGTGGCTATGGATACTGAGTTTCCAGGATTTTTAAGATGTACTCCCAAAGGTGTTTCAGATGAAGAATTCTACCAATGCCTCCAATTTAACGTAAATCGACTGAGCATACTCCAGTTAGGACTCACACTTACCGATGAGAATGGAAGAATAGGAATGACGTGGGAGTTTAACTTTCAAGATTTTGATAAAATTAGTAATATGGAGGGTGTTTATTCACTCGATTCATTTCTAAAGAATAAGGGATTTAATTTCAATATCCTGAGGAGCTGTGGAATTTCTCCCGAAGAATTTCGTAGACAATTTAACCCTATCCTTCGAAGCGGTAGAATACAAAGATGGATAACATTTCATGGATTGTATGACATCGCCTATTTGATGAAGTTTACCAACATAATATGCATGCCTACGTCCATGTCTAACTTCGCCATCATGGCTGCACATCTATTAGGAACCGTCACCGACCTGAAACATATGGCTCGGTACTCCGACTACCTACTCAATGGCAACCTAGGCTTAAAAAAACTGGCGAAGATGCTGCAAGTTAATCGCATTGGTACTGCCCACTTTGCTGGGTCTGACAGTTTGCTTACAGCATCAGTTTATGCCAAGATGAGGGTAATTATGAAGGTTGATCCAAAGATACACGAAGGTTTTTTATATGGATTACCATATCCAATTCAGGGTTACCGACCACCAGTTGTAATTGTAGATCCAAAGTTAACCCACAATCGTATCTAA

Coding sequence (CDS)

ATGAAGCACTGTTTATCAGAATTTCCAATTGTGGCTATGGATACTGAGTTTCCAGGATTTTTAAGATGTACTCCCAAAGGTGTTTCAGATGAAGAATTCTACCAATGCCTCCAATTTAACGTAAATCGACTGAGCATACTCCAGTTAGGACTCACACTTACCGATGAGAATGGAAGAATAGGAATGACGTGGGAGTTTAACTTTCAAGATTTTGATAAAATTAGTAATATGGAGGGTGTTTATTCACTCGATTCATTTCTAAAGAATAAGGGATTTAATTTCAATATCCTGAGGAGCTGTGGAATTTCTCCCGAAGAATTTCGTAGACAATTTAACCCTATCCTTCGAAGCGGTAGAATACAAAGATGGATAACATTTCATGGATTGTATGACATCGCCTATTTGATGAAGTTTACCAACATAATATGCATGCCTACGTCCATGTCTAACTTCGCCATCATGGCTGCACATCTATTAGGAACCGTCACCGACCTGAAACATATGGCTCGGTACTCCGACTACCTACTCAATGGCAACCTAGGCTTAAAAAAACTGGCGAAGATGCTGCAAGTTAATCGCATTGGTACTGCCCACTTTGCTGGGTCTGACAGTTTGCTTACAGCATCAGTTTATGCCAAGATGAGGGTAATTATGAAGGTTGATCCAAAGATACACGAAGGTTTTTTATATGGATTACCATATCCAATTCAGGGTTACCGACCACCAGTTGTAATTGTAGATCCAAAGTTAACCCACAATCGTATCTAA

Protein sequence

MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYRPPVVIVDPKLTHNRI

Homology

[Close]

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.8e-38
Identity = 93/217 (42.86%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           ++ CL  +  +A+DTEFP  LR T +  +DEE Y  + F+V+R  ++QLGLTL D NGRI
Sbjct: 4   IEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI 63

Query: 61  GMTWEFNFQDF--DKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEE-FRRQFNPILRS 120
           G TWE NF DF  D   N + +     FL+  G +   +R  GI  E  F   F  + ++
Sbjct: 64  GGTWEINFSDFGVDDARNEKSI----EFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKT 123

Query: 121 GRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLN 180
            R   W+TFHG YDIAYL+K      +P +   F+   A +LG+V DLK MA   +  L+
Sbjct: 124 RRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEG-LS 183

Query: 181 GNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
             LGL+ LA    +NR+GTAH AGS++ LTA V+AK+
Sbjct: 184 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-35
Identity = 85/236 (36.02%), Postives = 129/236 (54.66%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           M  CL  FP++A DTE+PG +  T    S +E Y+ ++ NV    ++Q G TL +  G I
Sbjct: 24  MAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKLIQCGFTLFNAKGEI 83

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNP----ILR 120
           G  WE NF +F   S+     S++ FL+  G +   +R  G+  + F   F P    + R
Sbjct: 84  GGVWEINFSNFGDPSDTRNELSIE-FLRRHGLDLQKIRDEGV--DMFGYGFFPKLMTVFR 143

Query: 121 SGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLL 180
           S +   ++TF G YD AY +   N   +P +   FA     + G V D K MA + +  L
Sbjct: 144 SQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKVMAGFCEG-L 203

Query: 181 NGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGL 233
             +LGL KLA++LQ+ R+G AH AGSDSL+TA V+ K++ + + D +   G +YG+
Sbjct: 204 GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE-DSRFARGLIYGI 254

[Close]

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot
Match: O64773 (Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CAF1-5 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-34
Identity = 91/217 (41.94%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           +KHC S    +A+DTEFPG L+ TP   SDE  Y+ ++FNV+   ++QLGLTL  +   I
Sbjct: 21  LKHCNS----IAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLIQLGLTLFGKG--I 80

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPIL--RSG 120
             TWE N  DF++  +++   S+ +FLKN G + + +R  GI  EEF  +F+ IL  + G
Sbjct: 81  TKTWEINLSDFNESKSLKNDKSI-AFLKNNGLDLDKIREEGIGIEEFFMEFSQILNEKHG 140

Query: 121 RIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGT-VTDLKHMARYSDYLLN 180
           ++ RW+TF G YD AYL+K      +P +   F      LLG  V D+K MA      L+
Sbjct: 141 KM-RWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSG-LS 200

Query: 181 GNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
              GL+++A +LQ+ R+G AH AGSDS LTA V+ K+
Sbjct: 201 SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228

[Close]

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot
Match: Q9C6M9 (Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=CAF1-4 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-33
Identity = 90/218 (41.28%), Postives = 128/218 (58.72%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           ++ CL  F  +A+DTEFPG L+ TP   S+E  Y+ ++FNV+   ++QLG TL D  G I
Sbjct: 16  IRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQLGFTLFDRRG-I 75

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPIL--RSG 120
             TWE N  DF++    +   S+ +FLK+ G N + +   GI  EEF R F+ IL  + G
Sbjct: 76  TKTWEINLSDFNEHKCFKNDKSI-AFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDG 135

Query: 121 RIQRWITFHGLYDIAYLMK-FTNIICMPTSMSNFAIMAAHLLGT-VTDLKHMARYSDYLL 180
           +I  W+ F G YD AYL+K  T    +P +   F      LLG  V D+K +A  S   L
Sbjct: 136 KI-TWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAE-SCSGL 195

Query: 181 NGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
           +   GL+++A +LQ+ R+G AH AGSDS LTA V+ K+
Sbjct: 196 SSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229

[Close]

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 9.5e-32
Identity = 88/250 (35.20%), Postives = 134/250 (53.60%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKG---VSDEEFYQCLQFNVNRLSILQLGLTLTDEN 60
           ++  + +FP VAMDTEFPG + C P G    + E  Y+ L+ NVN L ++QLGLT +DE 
Sbjct: 27  IREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEK 86

Query: 61  GRIG--------MTWEFNFQDFDKISNMEGVYSLDS--FLKNKGFNFNILRSCGISPEEF 120
           G +           W+FNF++FD  S+   +Y+ DS   L+  G +F      GI  + F
Sbjct: 87  GNLPTCGTDNKYCIWQFNFREFDLESD---IYATDSIELLRQSGIDFVKNNEFGIDSKRF 146

Query: 121 RRQFNPILRSGRI----QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVT 180
                 ++ SG +      W+TFH  YD  YL+K      +P + + F  M +     V 
Sbjct: 147 AEL---LMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVY 206

Query: 181 DLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKV-DP 233
           D+KH+ ++ + L   + GL KLA++L V R+G  H AGSDSLLT+  + K++    +   
Sbjct: 207 DIKHLMKFCNSL---HGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGSM 266

[Close]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL
Match: A0A6J1HSR3 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467090 PE=3 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 5.4e-147
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL
Match: A0A6J1HXB4 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467089 PE=3 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 7.8e-146
Identity = 253/255 (99.22%), Postives = 253/255 (99.22%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEF RQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFSRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDS LTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSFLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL
Match: A0A6J1IIN1 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 6.6e-145
Identity = 252/255 (98.82%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVN+LSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNQLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFT+IICMPTSMS FAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTSIICMPTSMSIFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL
Match: A0A6J1HRD6 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467091 PE=3 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.5e-144
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFL CTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLTCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEF RQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFSRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           P VVIVDPKLTHNRI
Sbjct: 271 PRVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL
Match: A0A6J1ESM7 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111435626 PE=3 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.1e-131
Identity = 228/256 (89.06%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKH LSEFPIVA+DTEFPGFLR TPKGVSDEEFYQCLQFNVNRLSILQLGLTLTD+NG+I
Sbjct: 31  MKHYLSEFPIVAIDTEFPGFLRWTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDDNGKI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFD+ISNMEGVYSLDSFLKNKGFNFN LRSCGI+P+EF RQF P++RSGRI
Sbjct: 91  GMTWEFNFQDFDQISNMEGVYSLDSFLKNKGFNFNKLRSCGIAPQEFSRQFKPVIRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           Q+WITFHGLYDIAYLMKF NII MPTSMS FA++AAHLLGTVTDLKHMARYSDYL NGNL
Sbjct: 151 QKWITFHGLYDIAYLMKFNNIISMPTSMSMFAMIAAHLLGTVTDLKHMARYSDYLFNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAK+LQ+NR+GTAHFAGSDSLLTASVYAKM+VIMKV+PKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKLLQINRVGTAHFAGSDSLLTASVYAKMKVIMKVEPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDP-KLTHNRI 256
           PPVVIVDP KLT +RI
Sbjct: 271 PPVVIVDPSKLTDDRI 286

[Close]

BLAST of CmaCh19G001670 vs. NCBI nr
Match: XP_022967646.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 530.0 bits (1364), Expect = 1.1e-146
Identity = 255/255 (100.00%), Postives = 255/255 (100.00%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. NCBI nr
Match: XP_022967644.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 526.2 bits (1354), Expect = 1.6e-145
Identity = 253/255 (99.22%), Postives = 253/255 (99.22%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEF RQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFSRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDS LTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSFLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. NCBI nr
Match: XP_022975238.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 523.1 bits (1346), Expect = 1.4e-144
Identity = 252/255 (98.82%), Postives = 254/255 (99.61%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVN+LSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNQLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFT+IICMPTSMS FAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTSIICMPTSMSIFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           PPVVIVDPKLTHNRI
Sbjct: 271 PPVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. NCBI nr
Match: XP_022967647.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 521.9 bits (1343), Expect = 3.0e-144
Identity = 252/255 (98.82%), Postives = 252/255 (98.82%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKHCLSEFPIVAMDTEFPGFL CTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI
Sbjct: 31  MKHCLSEFPIVAMDTEFPGFLTCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEF RQFNPILRSGRI
Sbjct: 91  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFSRQFNPILRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL
Sbjct: 151 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDPKLTHNRI 256
           P VVIVDPKLTHNRI
Sbjct: 271 PRVVIVDPKLTHNRI 285

[Close]

BLAST of CmaCh19G001670 vs. NCBI nr
Match: XP_022928830.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 476.5 bits (1225), Expect = 1.5e-130
Identity = 228/256 (89.06%), Postives = 245/256 (95.70%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           MKH LSEFPIVA+DTEFPGFLR TPKGVSDEEFYQCLQFNVNRLSILQLGLTLTD+NG+I
Sbjct: 31  MKHYLSEFPIVAIDTEFPGFLRWTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDDNGKI 90

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPILRSGRI 120
           GMTWEFNFQDFD+ISNMEGVYSLDSFLKNKGFNFN LRSCGI+P+EF RQF P++RSGRI
Sbjct: 91  GMTWEFNFQDFDQISNMEGVYSLDSFLKNKGFNFNKLRSCGIAPQEFSRQFKPVIRSGRI 150

Query: 121 QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLNGNL 180
           Q+WITFHGLYDIAYLMKF NII MPTSMS FA++AAHLLGTVTDLKHMARYSDYL NGNL
Sbjct: 151 QKWITFHGLYDIAYLMKFNNIISMPTSMSMFAMIAAHLLGTVTDLKHMARYSDYLFNGNL 210

Query: 181 GLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGLPYPIQGYR 240
           GLKKLAK+LQ+NR+GTAHFAGSDSLLTASVYAKM+VIMKV+PKIHEGFLYGLPYPIQGYR
Sbjct: 211 GLKKLAKLLQINRVGTAHFAGSDSLLTASVYAKMKVIMKVEPKIHEGFLYGLPYPIQGYR 270

Query: 241 PPVVIVDP-KLTHNRI 256
           PPVVIVDP KLT +RI
Sbjct: 271 PPVVIVDPSKLTDDRI 286

[Close]

BLAST of CmaCh19G001670 vs. TAIR 10
Match: AT3G44240.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 1.3e-39
Identity = 93/217 (42.86%), Postives = 129/217 (59.45%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           ++ CL  +  +A+DTEFP  LR T +  +DEE Y  + F+V+R  ++QLGLTL D NGRI
Sbjct: 4   IEDCLRSYRFIAIDTEFPSTLRETTQHATDEERYMDMSFSVDRAKLIQLGLTLFDINGRI 63

Query: 61  GMTWEFNFQDF--DKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEE-FRRQFNPILRS 120
           G TWE NF DF  D   N + +     FL+  G +   +R  GI  E  F   F  + ++
Sbjct: 64  GGTWEINFSDFGVDDARNEKSI----EFLRRNGLDLRKIREEGIRIEGFFSEMFWMLKKT 123

Query: 121 GRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLLN 180
            R   W+TFHG YDIAYL+K      +P +   F+   A +LG+V DLK MA   +  L+
Sbjct: 124 RRNITWVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEG-LS 183

Query: 181 GNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
             LGL+ LA    +NR+GTAH AGS++ LTA V+AK+
Sbjct: 184 SRLGLETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]

BLAST of CmaCh19G001670 vs. TAIR 10
Match: AT1G06450.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 85/236 (36.02%), Postives = 129/236 (54.66%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           M  CL  FP++A DTE+PG +  T    S +E Y+ ++ NV    ++Q G TL +  G I
Sbjct: 24  MAECLKRFPLIAFDTEYPGIIFRTYFDSSSDECYRAMKGNVENTKLIQCGFTLFNAKGEI 83

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNP----ILR 120
           G  WE NF +F   S+     S++ FL+  G +   +R  G+  + F   F P    + R
Sbjct: 84  GGVWEINFSNFGDPSDTRNELSIE-FLRRHGLDLQKIRDEGV--DMFGYGFFPKLMTVFR 143

Query: 121 SGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVTDLKHMARYSDYLL 180
           S +   ++TF G YD AY +   N   +P +   FA     + G V D K MA + +  L
Sbjct: 144 SQKHVEFVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKVMAGFCEG-L 203

Query: 181 NGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKVDPKIHEGFLYGL 233
             +LGL KLA++LQ+ R+G AH AGSDSL+TA V+ K++ + + D +   G +YG+
Sbjct: 204 GEHLGLSKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE-DSRFARGLIYGI 254

[Close]

BLAST of CmaCh19G001670 vs. TAIR 10
Match: AT1G61470.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 148.3 bits (373), Expect = 8.5e-36
Identity = 91/217 (41.94%), Postives = 131/217 (60.37%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           +KHC S    +A+DTEFPG L+ TP   SDE  Y+ ++FNV+   ++QLGLTL  +   I
Sbjct: 21  LKHCNS----IAIDTEFPGCLKETPMDASDEIRYRDMKFNVDNTHLIQLGLTLFGKG--I 80

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPIL--RSG 120
             TWE N  DF++  +++   S+ +FLKN G + + +R  GI  EEF  +F+ IL  + G
Sbjct: 81  TKTWEINLSDFNESKSLKNDKSI-AFLKNNGLDLDKIREEGIGIEEFFMEFSQILNEKHG 140

Query: 121 RIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGT-VTDLKHMARYSDYLLN 180
           ++ RW+TF G YD AYL+K      +P +   F      LLG  V D+K MA      L+
Sbjct: 141 KM-RWVTFQGSYDKAYLLKGLTRKPLPETSKEFDETVQQLLGRFVYDVKKMAGLCSG-LS 200

Query: 181 GNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
              GL+++A +LQ+ R+G AH AGSDS LTA V+ K+
Sbjct: 201 SRFGLQRIADVLQMRRVGKAHHAGSDSELTARVFTKL 228

[Close]

BLAST of CmaCh19G001670 vs. TAIR 10
Match: AT1G27890.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 1.6e-34
Identity = 90/218 (41.28%), Postives = 128/218 (58.72%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKGVSDEEFYQCLQFNVNRLSILQLGLTLTDENGRI 60
           ++ CL  F  +A+DTEFPG L+ TP   S+E  Y+ ++FNV+   ++QLG TL D  G I
Sbjct: 16  IRDCLKHFSSIAIDTEFPGCLKETPMDASEEIRYRDMKFNVDNTHLIQLGFTLFDRRG-I 75

Query: 61  GMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNFNILRSCGISPEEFRRQFNPIL--RSG 120
             TWE N  DF++    +   S+ +FLK+ G N + +   GI  EEF R F+ IL  + G
Sbjct: 76  TKTWEINLSDFNEHKCFKNDKSI-AFLKSNGLNLDKIGEEGIGIEEFFRDFSQILKEKDG 135

Query: 121 RIQRWITFHGLYDIAYLMK-FTNIICMPTSMSNFAIMAAHLLGT-VTDLKHMARYSDYLL 180
           +I  W+ F G YD AYL+K  T    +P +   F      LLG  V D+K +A  S   L
Sbjct: 136 KI-TWVNFQGSYDNAYLVKGLTGGKPLPETKEEFHETVEQLLGKFVFDVKKIAE-SCSGL 195

Query: 181 NGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 215
           +   GL+++A +LQ+ R+G AH AGSDS LTA V+ K+
Sbjct: 196 SSRFGLQRIADVLQMKRVGKAHHAGSDSELTARVFTKL 229

[Close]

BLAST of CmaCh19G001670 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 6.7e-33
Identity = 88/250 (35.20%), Postives = 134/250 (53.60%), Query Frame = 0


Query: 1   MKHCLSEFPIVAMDTEFPGFLRCTPKG---VSDEEFYQCLQFNVNRLSILQLGLTLTDEN 60
           ++  + +FP VAMDTEFPG + C P G    + E  Y+ L+ NVN L ++QLGLT +DE 
Sbjct: 27  IREVVDDFPFVAMDTEFPGIV-CRPVGTFKTNTEYHYETLKTNVNILKMIQLGLTFSDEK 86

Query: 61  GRIG--------MTWEFNFQDFDKISNMEGVYSLDS--FLKNKGFNFNILRSCGISPEEF 120
           G +           W+FNF++FD  S+   +Y+ DS   L+  G +F      GI  + F
Sbjct: 87  GNLPTCGTDNKYCIWQFNFREFDLESD---IYATDSIELLRQSGIDFVKNNEFGIDSKRF 146

Query: 121 RRQFNPILRSGRI----QRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIMAAHLLGTVT 180
                 ++ SG +      W+TFH  YD  YL+K      +P + + F  M +     V 
Sbjct: 147 AEL---LMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVY 206

Query: 181 DLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKMRVIMKV-DP 233
           D+KH+ ++ + L   + GL KLA++L V R+G  H AGSDSLLT+  + K++    +   
Sbjct: 207 DIKHLMKFCNSL---HGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGSM 266

The following BLAST results are available for this feature:

BLAST of CmaCh19G001670 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXM4	1.8e-38	42.86	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SHJ0	1.8e-35	36.02	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
O64773	1.2e-34	41.94	Probable CCR4-associated factor 1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9C6M9	2.3e-33	41.28	Putative CCR4-associated factor 1 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	9.5e-32	35.20	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of CmaCh19G001670 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSR3	5.4e-147	100.00	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467090 PE=3 S...	[more]
A0A6J1HXB4	7.8e-146	99.22	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467089 PE=3 S...	[more]
A0A6J1IIN1	6.6e-145	98.82	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 S...	[more]
A0A6J1HRD6	1.5e-144	98.82	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467091 PE=3 S...	[more]
A0A6J1ESM7	7.1e-131	89.06	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111435626 PE=3...	[more]

BLAST of CmaCh19G001670 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967646.1	1.1e-146	100.00	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022967644.1	1.6e-145	99.22	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022975238.1	1.4e-144	98.82	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022967647.1	3.0e-144	98.82	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022928830.1	1.5e-130	89.06	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]

BLAST of CmaCh19G001670 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G44240.1	1.3e-39	42.86	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G06450.1	1.3e-36	36.02	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G61470.1	8.5e-36	41.94	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G27890.1	1.6e-34	41.28	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT2G32070.1	6.7e-33	35.20	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 6..103 e-value: 6.0E-6 score: 25.7
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 1..234 e-value: 9.9E-58 score: 197.3
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..240
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 1..240
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001670.1	CmaCh19G001670.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006402	mRNA catabolic process
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity