CmaCh19G001520 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G001520
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Poly(A)-specific ribonuclease
Location	Cma_Chr19: 1005429 .. 1009049 (+)
RNA-Seq Expression	CmaCh19G001520
Synteny	CmaCh19G001520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCGAGGTCAATCGAAGCGAGATGTTTGGTCTCACAATTTATTGAATGAGATAGAAGTTATGGAGCAATATCTATTAGAGTTTCCGATTATGGTCATAGATACCGAGTTTCTAGGTAAAATTTAAACTTTAAGTTGGTGCTATCGATCGATTTTTGAGTTTTGTTTTATTGACTTTTGAATGTATTTTTTTTTTTAGGATTTTTAAGATGCACTCCAAGTCGTTTCCTATGAATGCCTTCGATTCGAGTTCCAATTAGCACTCAAACTCAGCTCATCCATGAAAATGGAAAATAGGGATGACTTGGTAGTGAGATTTTGATCAAATTAGAATATCTGAGGTGTTTTTCACCCAATTCATTTCTCAATATGAGATTTGATTTAGCCCATCCTAAATGGTCGAACATAACTTTCGAGCCATATTAGGCACGTGACTAACCTCAAACACATGCTTATCCATAAAAAAAAATAATAATTTAATCTTTATTACACTCTATCATTTGGTAATAGATTTTCTTTTTTAATTTGAAAACATATTTATGGGATGTATTTCTATTTTCGATAATCTTACTTTCTTTTCTCTGAGTTGATTTTTAATATATATATTTTCACTTCTTCTCACTTTTATACTCAATTCAAGTAGTTATTCGAAAGAAATAGTGAAAATTTTTGAAGAAGGGGCGATGGTTAGAGGTCAATGGGAGCGATGGTTAGAGGTCAATGGGAGCGAGAGGTTTGGTCTCACTAATCAAATAGAATTTATGATGCAGTATATATTAAAATTTTCAAATGTGGCATGAATACCTAGTTTCTAGCTAAAACTTAAATGGATAAGTTGGTGATATACCACATTTCGTATTTTTTTAGTTTTGTTTTAGTACTTGATCTTTTTTTTTTTTTATGATTTTTAAGATCACCACAAAAGACGTTTTAATTGAATAGTTTCAAATGAATAATTATATGAATGACTATGATTTTAATGTGAATCATCCTCCAATTAGGACTAACTCTCAGCGATAAAAATGAAAATATAGGGGGACTTGTAGTTTAAATTGAGATTTTTTTTTTTATCAAATGAGCATATCGAACGTGTTTTTTCACTGAATTCATTTATGAAGAATAAGATATTTGATTTTAATAGAACGAGCAGCCTAGTCTAATTTAGCCCCCATCCTAAATGGTCAAATAATAACATTTCATGGATTTTCTGACATGGCATAATCACCAACCTCAAACATATGTACGTACTCTTCCATTGTTCTTCAAAGATTTTTTTAAAAATTAAAATAAAATAATTTAATTTTTATTACACTTTTGTCTTTTATTTTCAATCAAACTAAAACGTTGTTATTTTATTATTAATTTTTTAAAAAAAGTTGGTAACATATTTCCTTTTTAAATTTGAAAACATATATATGTATTTCTATTTTGAATTAGTAGATTTTTATAATATATAGTTTCACCCTTTCTCACTTTCATACTCAATTCAATATTTTATTTTGATTGTGAAGTTAAAAAATTTTCTGACAAATAATCAATAAGCAGAACAAGTAGTTGAAGAAAGGATGATAATTATTGGAGAAAGGGTTAGAGGTCAATGGAAGCCAGATGTTTGATTCCACAATTTATTGGATGAGATCAAAGTTATGATCCAGTATCTATCCGAGTTCCCAATTGTGGTCATGAATACCGAGTTTCTAGGTAAAAATTAAACTTTTGAGGTGAGAAGTTATTTAGTGATTTTTTGAGTTTTGTTTTACTGACATATCTTTTTTTATGATTATAAGATGGACTACAAGTCGTTATAAACAAAAAATTCTATTAATGTTTTTGATTTAATGTGAATCGAGTGAGCATCCTCTCGTTAGGACTCACACTTAGTTTAACTTTAGAGATTTTGATCAAATTAGGGATATGAAGGTGTTTGTTCACTAAATTCATTTCTCAATAACAAGTGATTTGATTTTAATAAGTTGATTAGCCATAGAATTGCTCAACAATAATTTTGTAGACAGTTTAGTCCTACCTTAGAAGTGGTCGCTTAGAAGTGGTCGAATACATATAACATGGACTTTATGACATCGCATGAAGTTTGCCAATATAATATGTTACCTGTGTCTATCGCTATCTTCGACTCATATTTGCCCAATGGATTCAATCAGCTCACGGTAAAAAAAAACATCATATGAGTTTGATGTACTTTTATCTTCAACAAGCAGCTCAGCCACCACTGCTACACATAAATTAGGAACAGTCATCGACCTCAAACACATGGCTCGGTACTGCAACTATCTACTCAATGAAAACCTAGGCTTAAAAAAACTGTCGAAGCTGCTCCAAGTTAACTGTATTGGTAGTGCCCACTTTGTTGGATCTGATAATCTGCCGAGCTAAAAACCTTTTTCAATCACAATTTATGGAGAAGACAGAACTTATGAAACATTATTTATCATCATTCACAATTGTGGCTATGGATATCGAGGTTCAAGGTAAAAATTAAACTTTGAAGGTGATGAGAAGTATGATTTTTTTAGTTTTGTTTTAGGGACTTTTTTTATGTATTTTTTTTAGGATTTGTAAGATAGACTCCCAACTGTGTTTCAAAAGAAGAATTCTATGAAAGCCTCCAATTTTATGTGAATTTATTGAGCATCCTCGGGTTAGGACTCACACTTACCAATGTGAATGAAAAAATAGAAAGGACGTGGGAGTTTAATTTTCAAGATTTTGATAAAATTAGTAATATGGAAGGTGTTTATTCACTCGATTCATTTCTAAAAAATGAGGGATTTAATTTCAATACAAGTACCTATTGAATTGCTCCCCAAAAATTTGGTAGACAATTTAACCCTATTCTTCAAACTGGTAAAATATAGAGATGGATAACATTTCATGGAGGGTATGACATCGCCTATTTAATGAAATTTACCAACATAATGTGCATGCCTACGTCCATGTCTATCTTCGCCACCACTGATACACATCTATTAGGAATAGTCACCGACCTCAAACATATGGCTCGCTACTTCGACTACCTACTCAATGGTAACCTAGGCTTAAAAAAACTGGCAAAGTTGCTCCAAGTTAATGGCATTGGTACTGGTCACTCTGCTCGGTCTGACAGTTTGCTTACCGCATCATTTTATGCCAAGATGAAGGTAATTCTCAAGGTTGAACCAAAGATATACGAAGGCTTTTTATATGGATTACGATATCCATTCAAGGTTATCAATAACTAGTTGTAATTATAGATCCATCCAAGTTAACCACCGTCCTATCTCAACCTATTATTAGATTTAAAAACTGTATTTTTCTTTGCCGACGGTATATATATGTATATATTTTAACTACAAATTATTTAATTTAAACATTTTTCATTTCGAAAAATAACTGAATGTTATGGATATATTAAGCAAAATTAAAAATTTAATCTTTATTATTATTAATTTTACACTTTCATCATTTATTTTTTATTGAAGTTATTTTTTATTGAAGATATAATTTTTGTTGTTATTTTATTATTAATTTGAGTTTCTAACTAAAACTTAAACTTGTATTATTGTGAATGTCTTTCATTTAGTGTGAATCTATCCTCCCATTAACTCACATTCTTCCATAA

mRNA sequence

ATGATTCGAGGTCAATCGAAGCGAGATGTTTGGTCTCACAATTTATTGAATGAGATAGAAGTTATGGAGCAATATCTATTAGAGTTTCCGATTATGGTCATAGATACCGAGTTTCTAGTGCCCACTTTGTTGGATCTGATAATCTGCCGAGCTAAAAACCTTTTTCAATCACAATTTATGGAGAAGACAGAACTTATGAAACATTATTTATCATCATTCACAATTGTGGCTATGGATATCGAGGTTCAAGGATTTAGATGGATAACATTTCATGGAGGGTATGACATCGCCTATTTAATGAAATTTACCAACATAATGTGCATGCCTACGTCCATGTCTATCTTCGCCACCACTGATACACATCTATTAGGAATAGTCACCGACCTCAAACATATGGCTCGCTACTTCGACTACCTACTCAATGGTAACCTAGGCTTAAAAAAACTGGCAAAGTTGCTCCAAGTTAATGGCATTGGTACTGGTCACTCTGCTCGGTCTGACAGTTTGCTTACCGCATCATTTTATGCCAAGATGAAGGTAATTCTCAAGGTTGAACCAAAGATATACGAAGGCTTTTTATATGGATTACGATATCCATTCAAGTGTGAATCTATCCTCCCATTAACTCACATTCTTCCATAA

Coding sequence (CDS)

ATGATTCGAGGTCAATCGAAGCGAGATGTTTGGTCTCACAATTTATTGAATGAGATAGAAGTTATGGAGCAATATCTATTAGAGTTTCCGATTATGGTCATAGATACCGAGTTTCTAGTGCCCACTTTGTTGGATCTGATAATCTGCCGAGCTAAAAACCTTTTTCAATCACAATTTATGGAGAAGACAGAACTTATGAAACATTATTTATCATCATTCACAATTGTGGCTATGGATATCGAGGTTCAAGGATTTAGATGGATAACATTTCATGGAGGGTATGACATCGCCTATTTAATGAAATTTACCAACATAATGTGCATGCCTACGTCCATGTCTATCTTCGCCACCACTGATACACATCTATTAGGAATAGTCACCGACCTCAAACATATGGCTCGCTACTTCGACTACCTACTCAATGGTAACCTAGGCTTAAAAAAACTGGCAAAGTTGCTCCAAGTTAATGGCATTGGTACTGGTCACTCTGCTCGGTCTGACAGTTTGCTTACCGCATCATTTTATGCCAAGATGAAGGTAATTCTCAAGGTTGAACCAAAGATATACGAAGGCTTTTTATATGGATTACGATATCCATTCAAGTGTGAATCTATCCTCCCATTAACTCACATTCTTCCATAA

Protein sequence

MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFMEKTELMKHYLSSFTIVAMDIEVQGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEPKIYEGFLYGLRYPFKCESILPLTHILP

Homology

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BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-13
Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 83  QGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNG 142
           +   W+TFH GYD  YL+K      +P S + F          V D+KH+ ++ + L   
Sbjct: 154 ENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSL--- 213

Query: 143 NLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEP-KIYEGFLYGL 197
           + GL KLA+LL+V  +G  H A SDSLLT+  + K+K    V P   Y G LYGL
Sbjct: 214 HGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGL 265

[Close]

BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot
Match: Q9SHJ0 (Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CAF1-1 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.0e-12
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0


Query: 87  WITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNGNLGL 146
           ++TF G YD AY +   N   +P +   FAT    + G V D K MA + +  L  +LGL
Sbjct: 147 FVTFQGAYDFAYFLSILNHGKLPETHGEFATEVVKVFGQVYDTKVMAGFCEG-LGEHLGL 206

Query: 147 KKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEPKIYEGFLYGL 197
            KLA+LLQ+  +G  H A SDSL+TA  + K+K + + + +   G +YG+
Sbjct: 207 SKLAQLLQITRVGRAHHAGSDSLMTALVFIKLKHVYE-DSRFARGLIYGI 254

[Close]

BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 9.1e-12
Identity = 72/265 (27.17%), Postives = 106/265 (40.00%), Query Frame = 0


Query: 8   RDVWSHNLLNEIEVMEQYLLEFPIMVIDTEF----------------------------- 67
           R+VW+HNL  E+ ++EQ + +FP + +DTEF                             
Sbjct: 17  REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLK 76

Query: 68  ----------LVPTLLD----LIICRAKN--LFQSQFMEKTELMKHY-LSSFTIV---AM 127
                     L  TL D    L  C      ++Q  F E   +   + L S  ++   A+
Sbjct: 77  ANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAI 136

Query: 128 DIEVQG-----------------------FRWITFHGGYDIAYLMKFTNIMCMPTSMSIF 187
           D+E                            W+TFH GYD  YL+K  +   +P  +S F
Sbjct: 137 DLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDF 196

Query: 188 ATTDTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFY 200
                    +V D+K++  +   L     GL+K+A+LL V  +G  H A SDSLLT   +
Sbjct: 197 FDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTLRTF 256

[Close]

BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 70.1 bits (170), Expect = 3.5e-11
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 83  QGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNG 142
           +   W+TFH GYD  YL+K      +P + + F    +     V D+KH+ ++ + L   
Sbjct: 155 ENVHWVTFHSGYDFGYLLKLLTCQNLPETQTGFFEMISVYFPRVYDIKHLMKFCNSL--- 214

Query: 143 NLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKV-EPKIYEGFLYGL 197
           + GL KLA+LL V  +G  H A SDSLLT+  + K++    +   + Y G LYGL
Sbjct: 215 HGGLNKLAELLDVERVGICHQAGSDSLLTSCTFRKLQENFFIGSMEKYSGVLYGL 266

[Close]

BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot
Match: Q9LXM4 (Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=CAF1-8 PE=3 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.9e-10
Identity = 39/92 (42.39%), Postives = 54/92 (58.70%), Query Frame = 0


Query: 87  WITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNGNLGL 146
           W+TFHG YDIAYL+K      +P +   F+     +LG V DLK MA   +  L+  LGL
Sbjct: 125 WVTFHGSYDIAYLLKGFTGEALPVTSERFSKAVARVLGSVYDLKVMAGRCEG-LSSRLGL 184

Query: 147 KKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 179
           + LA    +N +GT H A S++ LTA  +AK+
Sbjct: 185 ETLAHEFGLNRVGTAHHAGSNNELTAMVFAKV 215

[Close]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL
Match: A0A6J1IIN1 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 2.1e-51
Identity = 128/263 (48.67%), Postives = 154/263 (58.56%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNQLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFT+I+CMPTSMSIFA  
Sbjct: 130 NILRSCGISPEEFRRQFNPILRSGRIQRWITFHGLYDIAYLMKFTSIICMPTSMSIFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL
Match: A0A6J1HSR3 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467090 PE=3 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 4.6e-51
Identity = 128/263 (48.67%), Postives = 153/263 (58.17%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFRRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL
Match: A0A6J1HRD6 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467091 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 6.0e-51
Identity = 126/263 (47.91%), Postives = 152/263 (57.79%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF        + C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF-----PGFLTCTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFSRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL
Match: A0A6J1HXB4 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467089 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 1.3e-50
Identity = 127/263 (48.29%), Postives = 152/263 (57.79%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFSRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDS LTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSFLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL
Match: A0A6J1ESM7 (Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111435626 PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50
Identity = 130/260 (50.00%), Postives = 152/260 (58.46%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLL----------DLIICR 60
           ++ GQ KR+VWSHNLL EIE+M+ YL EFPI+ IDTEF  P  L          +   C 
Sbjct: 10  IVGGQWKREVWSHNLLEEIELMKHYLSEFPIVAIDTEF--PGFLRWTPKGVSDEEFYQCL 69

Query: 61  AKNL------------------------FQSQFMEKTELMK--HYLSSF---------TI 120
             N+                        F  Q  ++   M+  + L SF          +
Sbjct: 70  QFNVNRLSILQLGLTLTDDNGKIGMTWEFNFQDFDQISNMEGVYSLDSFLKNKGFNFNKL 129

Query: 121 VAMDIEVQGF--------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTH 180
            +  I  Q F              +WITFHG YDIAYLMKF NI+ MPTSMS+FA    H
Sbjct: 130 RSCGIAPQEFSRQFKPVIRSGRIQKWITFHGLYDIAYLMKFNNIISMPTSMSMFAMIAAH 189

Query: 181 LLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVI 202
           LLG VTDLKHMARY DYL NGNLGLKKLAKLLQ+N +GT H A SDSLLTAS YAKMKVI
Sbjct: 190 LLGTVTDLKHMARYSDYLFNGNLGLKKLAKLLQINRVGTAHFAGSDSLLTASVYAKMKVI 249

[Close]

BLAST of CmaCh19G001520 vs. NCBI nr
Match: XP_022975238.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 212.2 bits (539), Expect = 4.3e-51
Identity = 128/263 (48.67%), Postives = 154/263 (58.56%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNQLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFT+I+CMPTSMSIFA  
Sbjct: 130 NILRSCGISPEEFRRQFNPILRSGRIQRWITFHGLYDIAYLMKFTSIICMPTSMSIFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. NCBI nr
Match: XP_022967646.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 211.1 bits (536), Expect = 9.6e-51
Identity = 128/263 (48.67%), Postives = 153/263 (58.17%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFRRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. NCBI nr
Match: XP_022967647.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 210.7 bits (535), Expect = 1.2e-50
Identity = 126/263 (47.91%), Postives = 152/263 (57.79%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF        + C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF-----PGFLTCTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFSRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDSLLTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSLLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. NCBI nr
Match: XP_022967644.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 2.8e-50
Identity = 127/263 (48.29%), Postives = 152/263 (57.79%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLLDLIICRAKNLFQSQFM 60
           ++ G+ KRDVWSHNLL EIE+M+  L EFPI+ +DTEF  P  L    C  K +   +F 
Sbjct: 10  IVGGKWKRDVWSHNLLEEIELMKHCLSEFPIVAMDTEF--PGFLR---CTPKGVSDEEFY 69

Query: 61  EKTELMKHYLSSFT-------------------------------IVAMD--IEVQGF-- 120
           +  +   + LS                                  + ++D  ++ +GF  
Sbjct: 70  QCLQFNVNRLSILQLGLTLTDENGRIGMTWEFNFQDFDKISNMEGVYSLDSFLKNKGFNF 129

Query: 121 ---------------------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATT 180
                                      RWITFHG YDIAYLMKFTNI+CMPTSMS FA  
Sbjct: 130 NILRSCGISPEEFSRQFNPILRSGRIQRWITFHGLYDIAYLMKFTNIICMPTSMSNFAIM 189

Query: 181 DTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKM 202
             HLLG VTDLKHMARY DYLLNGNLGLKKLAK+LQVN IGT H A SDS LTAS YAKM
Sbjct: 190 AAHLLGTVTDLKHMARYSDYLLNGNLGLKKLAKMLQVNRIGTAHFAGSDSFLTASVYAKM 249

[Close]

BLAST of CmaCh19G001520 vs. NCBI nr
Match: XP_022928830.1 (putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata])

HSP 1 Score: 208.4 bits (529), Expect = 6.2e-50
Identity = 130/260 (50.00%), Postives = 152/260 (58.46%), Query Frame = 0


Query: 1   MIRGQSKRDVWSHNLLNEIEVMEQYLLEFPIMVIDTEFLVPTLL----------DLIICR 60
           ++ GQ KR+VWSHNLL EIE+M+ YL EFPI+ IDTEF  P  L          +   C 
Sbjct: 10  IVGGQWKREVWSHNLLEEIELMKHYLSEFPIVAIDTEF--PGFLRWTPKGVSDEEFYQCL 69

Query: 61  AKNL------------------------FQSQFMEKTELMK--HYLSSF---------TI 120
             N+                        F  Q  ++   M+  + L SF          +
Sbjct: 70  QFNVNRLSILQLGLTLTDDNGKIGMTWEFNFQDFDQISNMEGVYSLDSFLKNKGFNFNKL 129

Query: 121 VAMDIEVQGF--------------RWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTH 180
            +  I  Q F              +WITFHG YDIAYLMKF NI+ MPTSMS+FA    H
Sbjct: 130 RSCGIAPQEFSRQFKPVIRSGRIQKWITFHGLYDIAYLMKFNNIISMPTSMSMFAMIAAH 189

Query: 181 LLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVI 202
           LLG VTDLKHMARY DYL NGNLGLKKLAKLLQ+N +GT H A SDSLLTAS YAKMKVI
Sbjct: 190 LLGTVTDLKHMARYSDYLFNGNLGLKKLAKLLQINRVGTAHFAGSDSLLTASVYAKMKVI 249

[Close]

BLAST of CmaCh19G001520 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14
Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 83  QGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNG 142
           +   W+TFH GYD  YL+K      +P S + F          V D+KH+ ++ + L   
Sbjct: 154 ENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSL--- 213

Query: 143 NLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEP-KIYEGFLYGL 197
           + GL KLA+LL+V  +G  H A SDSLLT+  + K+K    V P   Y G LYGL
Sbjct: 214 HGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGL 265

[Close]

BLAST of CmaCh19G001520 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14
Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 83  QGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNG 142
           +   W+TFH GYD  YL+K      +P S + F          V D+KH+ ++ + L   
Sbjct: 154 ENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSL--- 213

Query: 143 NLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEP-KIYEGFLYGL 197
           + GL KLA+LL+V  +G  H A SDSLLT+  + K+K    V P   Y G LYGL
Sbjct: 214 HGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGL 265

[Close]

BLAST of CmaCh19G001520 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 2.6e-14
Identity = 45/115 (39.13%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 83  QGFRWITFHGGYDIAYLMKFTNIMCMPTSMSIFATTDTHLLGIVTDLKHMARYFDYLLNG 142
           +   W+TFH GYD  YL+K      +P S + F          V D+KH+ ++ + L   
Sbjct: 154 ENVHWVTFHSGYDFGYLLKLLTCQNLPDSQTDFFKLINVYFPTVYDIKHLMKFCNSL--- 213

Query: 143 NLGLKKLAKLLQVNGIGTGHSARSDSLLTASFYAKMKVILKVEP-KIYEGFLYGL 197
           + GL KLA+LL+V  +G  H A SDSLLT+  + K+K    V P   Y G LYGL
Sbjct: 214 HGGLNKLAELLEVERVGICHQAGSDSLLTSCTFRKLKENFFVGPLHKYSGVLYGL 265

[Close]

BLAST of CmaCh19G001520 vs. TAIR 10
Match: AT1G15920.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13
Identity = 72/265 (27.17%), Postives = 106/265 (40.00%), Query Frame = 0


Query: 8   RDVWSHNLLNEIEVMEQYLLEFPIMVIDTEF----------------------------- 67
           R+VW+HNL  E+ ++EQ + +FP + +DTEF                             
Sbjct: 17  REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLK 76

Query: 68  ----------LVPTLLD----LIICRAKN--LFQSQFMEKTELMKHY-LSSFTIV---AM 127
                     L  TL D    L  C      ++Q  F E   +   + L S  ++   A+
Sbjct: 77  ANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAI 136

Query: 128 DIEVQG-----------------------FRWITFHGGYDIAYLMKFTNIMCMPTSMSIF 187
           D+E                            W+TFH GYD  YL+K  +   +P  +S F
Sbjct: 137 DLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDF 196

Query: 188 ATTDTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFY 200
                    +V D+K++  +   L     GL+K+A+LL V  +G  H A SDSLLT   +
Sbjct: 197 FDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTLRTF 256

[Close]

BLAST of CmaCh19G001520 vs. TAIR 10
Match: AT1G15920.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13
Identity = 72/265 (27.17%), Postives = 106/265 (40.00%), Query Frame = 0


Query: 8   RDVWSHNLLNEIEVMEQYLLEFPIMVIDTEF----------------------------- 67
           R+VW+HNL  E+ ++EQ + +FP + +DTEF                             
Sbjct: 17  REVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYNYDTLK 76

Query: 68  ----------LVPTLLD----LIICRAKN--LFQSQFMEKTELMKHY-LSSFTIV---AM 127
                     L  TL D    L  C      ++Q  F E   +   + L S  ++   A+
Sbjct: 77  ANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELLRKSAI 136

Query: 128 DIEVQG-----------------------FRWITFHGGYDIAYLMKFTNIMCMPTSMSIF 187
           D+E                            W+TFH GYD  YL+K  +   +P  +S F
Sbjct: 137 DLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPEEISDF 196

Query: 188 ATTDTHLLGIVTDLKHMARYFDYLLNGNLGLKKLAKLLQVNGIGTGHSARSDSLLTASFY 200
                    +V D+K++  +   L     GL+K+A+LL V  +G  H A SDSLLT   +
Sbjct: 197 FDQMEKFFPVVYDIKYLMGFCTNLYG---GLEKIAELLGVKRVGISHQAGSDSLLTLRTF 256

The following BLAST results are available for this feature:

BLAST of CmaCh19G001520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SAI2	3.7e-13	39.13	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SHJ0	7.0e-12	38.18	Probable CCR4-associated factor 1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	9.1e-12	27.17	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9SKZ2	3.5e-11	35.65	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LXM4	2.9e-10	42.39	Putative CCR4-associated factor 1 homolog 8 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]

BLAST of CmaCh19G001520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IIN1	2.1e-51	48.67	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111474351 PE=3 S...	[more]
A0A6J1HSR3	4.6e-51	48.67	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467090 PE=3 S...	[more]
A0A6J1HRD6	6.0e-51	47.91	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467091 PE=3 S...	[more]
A0A6J1HXB4	1.3e-50	48.29	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111467089 PE=3 S...	[more]
A0A6J1ESM7	3.0e-50	50.00	Poly(A)-specific ribonuclease OS=Cucurbita moschata OX=3662 GN=LOC111435626 PE=3...	[more]

BLAST of CmaCh19G001520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022975238.1	4.3e-51	48.67	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022967646.1	9.6e-51	48.67	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022967647.1	1.2e-50	47.91	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022967644.1	2.8e-50	48.29	putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]	[more]
XP_022928830.1	6.2e-50	50.00	putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]	[more]

BLAST of CmaCh19G001520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G80780.1	2.6e-14	39.13	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	2.6e-14	39.13	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	2.6e-14	39.13	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.2	6.5e-13	27.17	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G15920.1	6.5e-13	27.17	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 83..198 e-value: 7.1E-21 score: 76.3
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 6..41
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 68..198
None	No IPR available	PANTHER	PTHR10797:SF57	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 3-RELATED	coord: 6..41 coord: 68..198
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 84..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G001520.1	CmaCh19G001520.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016070	RNA metabolic process
cellular_component	GO:0030014	CCR4-NOT complex
cellular_component	GO:0005622	intracellular anatomical structure
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity