CmaCh19G000920 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000920
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	rho-N domain-containing protein 1, chloroplastic-like
Location	Cma_Chr19: 542954 .. 547308 (+)
RNA-Seq Expression	CmaCh19G000920
Synteny	CmaCh19G000920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCCAAACTAATCTCTCCCTTTATCGGTGATATTCCCAAACACAGGCCAGTAGGGCAAAGAAGAACGTAGCGGAAGAGCGAAAATCCTCAAAAGAAATGCAGCTCTAAAACCCTTTTTCCCCCAACTAAAACCTTTCCTTCGAGCTGTTCAAACCAGCAATGTCTCAACTCCCTCATCTTCTTCCTAACAACGCTACAGGTTTCTGTTCTTGATATCTACAAATTCGTTGTTGGGTACTCTTTAATTTTGTGCTTTGTTTCCTTGAAAGCTTGGAAATTAAGTATTATCTTGTTTACATTTACTGGGTGTCTTTGATTTTCTTCTAGTTTTATGGGTTTTGTGCTGCCTGAGGACCCTGAGCTTCTTGAATTTTGAATTTCTATTTGGGAAGGGTTTTGTGGTTCTTGATTTTGTCTATGTTTTGCTGTTCTTTCCTTTCCTATGTGGAAATTATGGAGAAATTATGTGACTGTTGCGCAACTAGTTTAAGTTCAGTTTTAGAGTACTTAATACCACTTTCCGATTGCTTGAAAATTATCTACTTAGTTGGATTATGTGCGAGATCCCCACATCGGTTGGGGAGGAGAACGATACATTCTTTATAAGGGTGTGGAAACCTCTCACTAGTGGAAGCGTTTTAAAAACCTTAAGGGGAAGCCTAGAAGGGAATGATAGAAGAGGACGATATTTGCTAGCGATAGACTTAGGTTGTTACAAATGGTATCAGAGCTAGACACCGGGTGATGTGTCGGTGAGGAGGCTGAGCCCCAAAGAGGGATGGACATGAGACGATGTGCCAGCAATGACGCTGGCCTCGAAGGGGGTGGATTGAGGGGTCCCACATCGATTAGAGAAGGGAACGAGTGCTAGCGAGAATGCTTGGCCCCGAAAGAGAGTGAATTGTGAGATCCCACGTCGGTCAGAGAGGAGAACGAAACATTCTTTTTTAAGGTGTGGAGACTTCTTCCTAGCAGACCCGTTTAAAAACCTTGAGGGGAAGCCCAAATAGGACAATATCTGTTAGCAGTGGGCTTGGGCTGTTACAATGGTATCAAAGCCAGACACCAGGCAATGTGCCAGTGAGAAGGTGAGCCCCAAAGGGGGATGGACATGAGACGGTGTGCCAACAAGGACGCTGAGCCCTGAAGGGGGGTGGATTTGGAGGTCCCATATCGATTAGGGAAGGGAACGAGTGCCAGCGAGGACGCTGAGCCCCAAACGGAGGTGGATTGTGAGATCCTGCATCGGTCGGGAGGAGAACGAAGCATCCTTTATAAGGGTGTGGGAACTTCTCCCTACCAGACGCGTTTTAAAAACCTTGAGGGGAAGCCCAGAAGGAAAAATCCATAGAGGACAATGTCTGCTAGCGGTACGTTTGGGCCATTACAAATGGTATAAGAGCTAGACACCGAGCAATGTTCTAGTGAGGAGGCTGAGCTCCGAAGGGGGATGGACATGAGGTGGTGTGTTAGCAAGGACATTGGCCCCTGAAGGGAGTGGATTGGGGGCTCCCACATCAATTAGAGAAGGGAACGAGTGCCAGTGAGGACGTTGGGCCACGAACGAGTGTGGATTGTGAGATCCCACATCGATCGGGGAGGAGAATGAAACCACGTTTTGAAAACCTTGAGGGAAAATCGAGAAGGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTAGGATTGGGCGGTTACAGATTACTTGACCTGTTTAGCTACTTGATATTATTGCCTTAATTTTGTAGTGGATATGGTTCTGGGCATAACTCAACATCTTGTGGCAAAACTTTCCCTTCTTTCTCTCATGATATTGGCGTTTCTTGAACGTGATCTTGTTGACATGTATTCTGTTTCAATTTCTTGGCTTTATTATACCTTAATCTTGAGTTACATTGAAGTGTTCATAATTTATTGATGTGCCCCCATCCGTTCAGGGAACTGATTGACAATTATATTCGAGTCGTACTTATAGAAACTAATGTTGTTTTTTCTTATCGGTCACTATTGATGCATTATTGATGTTCAAAAGTAAGCTGACAACATGGTTTGCAATCGCACGAATTGGTTGTAGAAACATAAGATTGTTCATATATCCCCAAATCATGAGACTGTAACAATCCAAGCCCACCGCGGGTAGATATTGTCCTCCTTGGGCTTTCCCTCAAGGTTTAAAACGTATCTGTTAGGGAGAGGTTTTCACATCCTTATAAGGAATGCTTTGTTCCCCTCTCCAACCGACCACCCTCTTGGGGGCCAGCGTCCTCGCTGGCACACCACCCGGTGTGTAGCTCTGATACCATTTGTAACAACTCAAGCTCACCACTAGCCGATATTGTCCTCTTTGGACCTTCTCTTTCGGGCTTCTCCTCAAGGTTTTTTAGAAATGCCTCTGCTAGGGAGAGGTTTCCGCTAGCCGAGGACGCTAGACCTCGAAAGGGTGTGGATTGTGAGATCCCACATTGGTTGGGGAGGACAACGAAACCTTCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAGCCTCAAGGGGAAGCCGAAAAGGAAAGCCTAAAAGAGGACAATATTTGCTAGCCCAACAGTGGGCTCGGACCGTTACAAAATCTATTCCCAAATTCGCATTGAAGGTTAAGCAAATTGGATAAAAAAGAAAGGTTTGGGAATAAATCTGCTCTGTTCTTGCAATGTTCATGAGATCTCAGTGTAAGAATGGAATCATACTTTATTTTTGGACTTGGATACTCCTCTTTCATGATTTCCTCGTGATTTTTGTTCTAGTTTTCTTCATATGATCTTGGTTACTAGTGCTGGAAATTTAAAAGTTTATATAAACATGGATTCTTGATTTGATATAGGCTTTGGACTGTCGGATAGCAGATGCCTTCCGTGCTCGGGAGTTTTTGGACGAGCAGCCACCGTCTCTTCTCGCTCTTTATGTACTGAACATAGAATCAATGCGGCAGTCAAATTCCGACCCGTAAACTGTACTTTGTTGCGAGCGTCTTTTACGTGCCAAGCCAGCTCGGGAGGTCATAGGAAGTACTCGGATTTCTCTAAGCAAAATAGGCATGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGATAGAGACAGCCTTGAACATGTCGATGAATCTGATTTATTGTCGTCGAAGAATGGACCATTTCTTTCTATCTCGAGCAATTCGAAATCCCAAACCACGGCTACCCCGGGTCCAAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGATTCAAGCACAGCTTCGGGAACGAGCTGCGATGAAAGAAGAGAAGAAAATCGAAGCTCAAGGACAAACAAAAGGGAGTGAGACGGTCGATTCTCTTCTTACGCTATTGAGAAGGCATTCAGTGGAGCAAGGGAAGAGAGGCGGCGGAGGCGTCAAGGACTCGAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAAAAGCTCAAGCATTTTTGGCCTAAGTTCTCATTTGAGAGAGAAGGCTCAAGAGCCAACAGGCTCGTCTTTGAGTCGACCTGTTTCAAATTTTCAACGTAAATCCCCCGTGCCTGTGGTGAAGTACCAACCGGTTTCGCCCAGGGAAAATATTGTGAACTCCATTGATGTTGTGAATTCAAAGGGACTGAAACTCAACGGAACCGAGACAGGTTCTCAACTGAAAGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGACAGAGCCAGAGCCAGACCAAGAGTTCGAGTTGGAGCCAGAGCCTGAATCGTCGTATGAGCTAGAGCACGAACCTGATGAGATGGAGCCTGAACTTCTTAATTTATTAGGCGTCGATGACACATTTGATGAAGACGTTAAACACGATGAGAAATTTTCGAAGGATGATGATCACGAGGACTTGAACTCATTGAAGCTTGCTGAGCTGAGGGCGATCGCGAAATCTCGGAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTACGGTTGTTAAGCAACGCTCAGGTATGAAAATTTCATGTTGCACAGGATGTTTAGGGGCTTTTTTTGTTTTGCTTGAATATAATCAATCTGTATGACCAGTTTTGAGTTGAAATTAGCTTTACAGACCTTTTTCCCAGATTGTATATCAGGCTTAGCCTTTTCACAGGTGCAGAGTACTTGCAATCTCTATTCATATGAATCATTTCTAAAAAGCGTTTTTTTAAAGTTGGTGTTGTAAGAACAGGTTATGACTCTCACGAGTGTACTAAAGTAGTGGTGACACGTGAGTATTGCCCATCGAGCTATATCAAAGACCGAG

mRNA sequence

ACCCAAACTAATCTCTCCCTTTATCGGTGATATTCCCAAACACAGGCCAGTAGGGCAAAGAAGAACGTAGCGGAAGAGCGAAAATCCTCAAAAGAAATGCAGCTCTAAAACCCTTTTTCCCCCAACTAAAACCTTTCCTTCGAGCTGTTCAAACCAGCAATGTCTCAACTCCCTCATCTTCTTCCTAACAACGCTACAGGCTTTGGACTGTCGGATAGCAGATGCCTTCCGTGCTCGGGAGTTTTTGGACGAGCAGCCACCGTCTCTTCTCGCTCTTTATGTACTGAACATAGAATCAATGCGGCAGTCAAATTCCGACCCGTAAACTGTACTTTGTTGCGAGCGTCTTTTACGTGCCAAGCCAGCTCGGGAGGTCATAGGAAGTACTCGGATTTCTCTAAGCAAAATAGGCATGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGATAGAGACAGCCTTGAACATGTCGATGAATCTGATTTATTGTCGTCGAAGAATGGACCATTTCTTTCTATCTCGAGCAATTCGAAATCCCAAACCACGGCTACCCCGGGTCCAAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGATTCAAGCACAGCTTCGGGAACGAGCTGCGATGAAAGAAGAGAAGAAAATCGAAGCTCAAGGACAAACAAAAGGGAGTGAGACGGTCGATTCTCTTCTTACGCTATTGAGAAGGCATTCAGTGGAGCAAGGGAAGAGAGGCGGCGGAGGCGTCAAGGACTCGAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAAAAGCTCAAGCATTTTTGGCCTAAGTTCTCATTTGAGAGAGAAGGCTCAAGAGCCAACAGGCTCGTCTTTGAGTCGACCTGTTTCAAATTTTCAACGTAAATCCCCCGTGCCTGTGGTGAAGTACCAACCGGTTTCGCCCAGGGAAAATATTGTGAACTCCATTGATGTTGTGAATTCAAAGGGACTGAAACTCAACGGAACCGAGACAGGTTCTCAACTGAAAGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGACAGAGCCAGAGCCAGACCAAGAGTTCGAGTTGGAGCCAGAGCCTGAATCGTCGTATGAGCTAGAGCACGAACCTGATGAGATGGAGCCTGAACTTCTTAATTTATTAGGCGTCGATGACACATTTGATGAAGACGTTAAACACGATGAGAAATTTTCGAAGGATGATGATCACGAGGACTTGAACTCATTGAAGCTTGCTGAGCTGAGGGCGATCGCGAAATCTCGGAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTACGGTTGTTAAGCAACGCTCAGGTATGAAAATTTCATGTTGCACAGGATGTTTAGGGGCTTTTTTTGTTTTGCTTGAATATAATCAATCTGTATGACCAGTTTTGAGTTGAAATTAGCTTTACAGACCTTTTTCCCAGATTGTATATCAGGCTTAGCCTTTTCACAGGTGCAGAGTACTTGCAATCTCTATTCATATGAATCATTTCTAAAAAGCGTTTTTTTAAAGTTGGTGTTGTAAGAACAGGTTATGACTCTCACGAGTGTACTAAAGTAGTGGTGACACGTGAGTATTGCCCATCGAGCTATATCAAAGACCGAG

Coding sequence (CDS)

ATGTCTCAACTCCCTCATCTTCTTCCTAACAACGCTACAGGCTTTGGACTGTCGGATAGCAGATGCCTTCCGTGCTCGGGAGTTTTTGGACGAGCAGCCACCGTCTCTTCTCGCTCTTTATGTACTGAACATAGAATCAATGCGGCAGTCAAATTCCGACCCGTAAACTGTACTTTGTTGCGAGCGTCTTTTACGTGCCAAGCCAGCTCGGGAGGTCATAGGAAGTACTCGGATTTCTCTAAGCAAAATAGGCATGGCTACTCAAGAAGCAGAAATAGGCAAAATGAGGATAGAGACAGCCTTGAACATGTCGATGAATCTGATTTATTGTCGTCGAAGAATGGACCATTTCTTTCTATCTCGAGCAATTCGAAATCCCAAACCACGGCTACCCCGGGTCCAAGGGAGAAGGAAATTGTTGAACTTTTCAGGAAGATTCAAGCACAGCTTCGGGAACGAGCTGCGATGAAAGAAGAGAAGAAAATCGAAGCTCAAGGACAAACAAAAGGGAGTGAGACGGTCGATTCTCTTCTTACGCTATTGAGAAGGCATTCAGTGGAGCAAGGGAAGAGAGGCGGCGGAGGCGTCAAGGACTCGAGTTTTAACCATGTCAAAGAGAATGGTCCTTATGATGAAGGAAAAAGCTCAAGCATTTTTGGCCTAAGTTCTCATTTGAGAGAGAAGGCTCAAGAGCCAACAGGCTCGTCTTTGAGTCGACCTGTTTCAAATTTTCAACGTAAATCCCCCGTGCCTGTGGTGAAGTACCAACCGGTTTCGCCCAGGGAAAATATTGTGAACTCCATTGATGTTGTGAATTCAAAGGGACTGAAACTCAACGGAACCGAGACAGGTTCTCAACTGAAAGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACTGGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGACAGAGCCAGAGCCAGACCAAGAGTTCGAGTTGGAGCCAGAGCCTGAATCGTCGTATGAGCTAGAGCACGAACCTGATGAGATGGAGCCTGAACTTCTTAATTTATTAGGCGTCGATGACACATTTGATGAAGACGTTAAACACGATGAGAAATTTTCGAAGGATGATGATCACGAGGACTTGAACTCATTGAAGCTTGCTGAGCTGAGGGCGATCGCGAAATCTCGGAGTTTGAAAGGGTTTTCGAAGATGAAGAAGAGCGAGCTCGTACGGTTGTTAAGCAACGCTCAGGTATGA

Protein sequence

MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLLRASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSISSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTLLRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESEREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV

Homology

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BLAST of CmaCh19G000920 vs. ExPASy Swiss-Prot
Match: Q94K75 (Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RHON1 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-54
Identity = 179/423 (42.32%), Postives = 243/423 (57.45%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MS   HL  +   G+ LSDSRC   S V  R   +   S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVP-----N 62

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           R+SF C+ASSGG+R+  DFS+ N+HGY R  NRQ+  R+  + ++ SD+LSS+NGP  ++
Sbjct: 63  RSSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRER-AAMKEEKKIE--AQGQTKGSETVDSL 180
           SS+ K Q T++PGPREKEIVELFRK+QAQLR R AA KEEKKIE  ++GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LTLLRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSL 240
           L LLR+HS EQ KR     K SS   V+ +    + ++ ++      +    ++   SS 
Sbjct: 183 LKLLRKHSGEQSKRQVS--KFSSQGEVQGDTVDKQDRTGNL------VTSGNKDNNASSF 242

Query: 241 SRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES 300
           +RP S+F+RKSPVP  +  P    E    + D  +S  +      T +Q K  V    E 
Sbjct: 243 TRPTSSFRRKSPVPRSQSPPAYSSE---ATFDQSSSYSV------TWTQKKDTVELHDEP 302

Query: 301 EREHWEELQSQGETEQETEP-----EPDQEFELEPEPESSYELEHEPD------EMEPEL 360
           E E   E + + E E E  P     EPD   EL+PE  S Y+ E + D        +  +
Sbjct: 303 EHEPAYEHEHEPENESEPGPVTTMLEPDS--ELKPESSSFYQEEEDDDVTFDVLSQDDGI 362

Query: 361 LNLLGVDDTFDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRL 410
           L++L  DD   +D   D   ++++  +DL+ LKL ELR IAKSR LKG SKMKK+ELV L
Sbjct: 363 LDVLSDDDESLDDADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVEL 398

[Close]

BLAST of CmaCh19G000920 vs. ExPASy Swiss-Prot
Match: Q8L4E7 (SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-40
Identity = 137/371 (36.93%), Postives = 214/371 (57.68%), Query Frame = 0


Query: 60  LRASFTCQASSGGHR-KYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDE--SDLLSSKNGP 119
           ++ S  C A+   HR + SD ++  + G +R +++  +++D  E++DE  +D++SSKNGP
Sbjct: 36  MKLSLVCSANPNNHRSRSSDITRHQKGGSARRKSKPYQEKDDSENIDEFDTDIMSSKNGP 95

Query: 120 FLSISSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSE-TVD 179
            +S++SNS+ Q T+ PG REKEIVELF+++QAQLR R   KEEKK E Q + +G   +VD
Sbjct: 96  PISLTSNSRPQATSVPGEREKEIVELFKRVQAQLRARGKGKEEKKPE-QAKAQGERGSVD 155

Query: 180 SLLTLLRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGS 239
           SLL LLR+HSV+Q +R  G  K+ S +  K +      ++SSIF + +  +E+ ++P  +
Sbjct: 156 SLLNLLRKHSVDQ-RRKSGDEKEQSVDQTKRSNESGNKQNSSIF-IKNDTQEEQKKPHPA 215

Query: 240 SLSRPVSNFQRKSPVPVVKYQPVS--PRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWT 299
           +  RP SNF+R+SPVP VK+QPV+    E ++N+I+                        
Sbjct: 216 AFKRPASNFRRRSPVPNVKFQPVTNVDAERVINNIN------------------------ 275

Query: 300 RQESEREHWEELQSQGETEQETEPEPDQEFE----LEPEPESSYELEHEPDEMEPELLNL 359
             ++ +E    L+++  T+   EP+    FE    +EPE  S  +L+H  D+ EP+  + 
Sbjct: 276 --DAVQEAKPTLENKAATD---EPDSVSTFEPNSVIEPENLSLDDLDHISDD-EPDASDT 335

Query: 360 LGVDDTFDE-----------DVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKM 410
                 +DE           D  HD          DL++LK+ ELR +AKSR +KG+SKM
Sbjct: 336 DEPSGEYDEPSLQIPSVPIIDESHDTTLKSSLGGPDLSTLKVTELRELAKSRGIKGYSKM 373

[Close]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL
Match: A0A6J1HST4 (rho-N domain-containing protein 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467115 PE=4 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 9.1e-221
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP 240
           LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP
Sbjct: 181 LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP 240

Query: 241 VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE 300
           VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE
Sbjct: 241 VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE 300

Query: 301 HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV 360
           HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV
Sbjct: 301 HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV 360

Query: 361 KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 412

[Close]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL
Match: A0A6J1HJC1 (rho-N domain-containing protein 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464086 PE=4 SV=1)

HSP 1 Score: 751.5 bits (1939), Expect = 1.8e-213
Identity = 404/414 (97.58%), Postives = 407/414 (98.31%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKR--GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLS 240
           LRRHSVEQGKR  GGGGVKDSS NHVKENGPYDEGKSSSIFGLSSHLREKAQEP GSSLS
Sbjct: 181 LRRHSVEQGKRGGGGGGVKDSSLNHVKENGPYDEGKSSSIFGLSSHLREKAQEPAGSSLS 240

Query: 241 RPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE 300
           RPVSNFQRKSPVPVVKYQP+SP E+IVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE
Sbjct: 241 RPVSNFQRKSPVPVVKYQPISPGESIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE 300

Query: 301 REHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE 360
           REHWEELQSQGETEQ  EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE
Sbjct: 301 REHWEELQSQGETEQ--EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE 360

Query: 361 DVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           DVKHDEKFSK+DDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 DVKHDEKFSKNDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 412

[Close]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL
Match: A0A1S3BHF2 (rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 2.8e-161
Identity = 324/417 (77.70%), Postives = 360/417 (86.33%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQ  HLLP N TGFGLSDSRCLPCSGV GRAA+ S RSLC EH IN  VKFRP+NCT L
Sbjct: 1   MSQAIHLLPRNPTGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGINVPVKFRPLNCTSL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
             SFTC+ASS GHR+  DF KQNR GYSRSRNRQNE+R+SLE+VDESDLLSS+NGP LSI
Sbjct: 61  GVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDESDLLSSRNGPLLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SS  KSQ TATPGPREKEIVELFRK+QAQLRERAAMKEEKK+EAQGQTKGSETVDSLL L
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKL 180

Query: 181 LRRHSVEQGKR---GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSL 240
           LR+H+VEQGKR    GG  KD SFNHVKENGPYDEG+ SSIFGLS +LREKAQEP G S 
Sbjct: 181 LRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSPNLREKAQEPAG-SF 240

Query: 241 SRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES 300
            RP SNFQR+SPVP VKYQP+ P E+IV+S + +NSKG+KLNGTETGSQLKAKVWTRQES
Sbjct: 241 RRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGV----D 360
           EREHWEELQSQ +TEQ  EPE DQEFE+EPE E +Y+LEHE DEMEPEL+NLLGV    D
Sbjct: 301 EREHWEELQSQRDTEQ--EPEVDQEFEMEPEAE-TYDLEHEADEMEPELVNLLGVSSDID 360

Query: 361 DTFDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNA 411
           DTF++D+K +E+FSK  +HE+LNSLKLAELRAIAKSRSL+GFSKMKKSELV+LLSN+
Sbjct: 361 DTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNS 412

[Close]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL
Match: A0A0A0L7X8 (Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 SV=1)

HSP 1 Score: 574.7 bits (1480), Expect = 3.1e-160
Identity = 324/421 (76.96%), Postives = 359/421 (85.27%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQ  HLLP+N TGFGLSDSRC+PCSGV GRAA+ S  SLC EHRIN  VKFRP+NCT L
Sbjct: 1   MSQAIHLLPHNPTGFGLSDSRCIPCSGVSGRAASFSFHSLCAEHRINVPVKFRPLNCTSL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
             SFTC+ASSGGHR+  DF KQNRHG+SRSRNRQNE+R+SL++VDESDLL SKNGP LSI
Sbjct: 61  GESFTCKASSGGHRRNPDFPKQNRHGFSRSRNRQNEERESLDNVDESDLLLSKNGPLLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SS  KSQ TATPGPREKEIVELFRK+QAQLRERAAMKEEKK+EAQGQTKGSETVDSLL L
Sbjct: 121 SSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKVEAQGQTKGSETVDSLLKL 180

Query: 181 LRRHSVEQGKR--GGGGV--KDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSS 240
           LR+HSVEQGKR  GGGG   KD SFNHVKENGPYDEG+ SS FGLS +LREKAQ      
Sbjct: 181 LRKHSVEQGKRSSGGGGSSNKDISFNHVKENGPYDEGRGSSFFGLSPNLREKAQ------ 240

Query: 241 LSRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQE 300
             RPVSNFQR+SPVP VKYQP+ P E+IVNS + +NSKG+K NGT+TGSQLK KVWTRQE
Sbjct: 241 --RPVSNFQRRSPVPRVKYQPIYPGESIVNSTNGMNSKGVKPNGTDTGSQLKGKVWTRQE 300

Query: 301 SEREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLG----V 360
           SEREHWEELQSQ E EQ  EPEPDQEFELEPE E +Y+LEHE DEMEPEL+NLLG    V
Sbjct: 301 SEREHWEELQSQREAEQ--EPEPDQEFELEPEAE-TYDLEHEGDEMEPELVNLLGVSSDV 360

Query: 361 DDTFDEDVKHDEKFSK--DDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNA 412
           DDTF++DVK +E+F+K  + +HEDLNSLKLAELRAIAKSRSL+GFSKMKKSELV+LLSN 
Sbjct: 361 DDTFEDDVKDNEEFAKHGEQEHEDLNSLKLAELRAIAKSRSLRGFSKMKKSELVQLLSNG 410

[Close]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL
Match: A0A1S4DXI1 (rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103489870 PE=4 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 2.2e-158
Identity = 324/431 (75.17%), Postives = 360/431 (83.53%), Query Frame = 0


Query: 1   MSQLPHLLPNNAT--------------GFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRI 60
           MSQ  HLLP N T              GFGLSDSRCLPCSGV GRAA+ S RSLC EH I
Sbjct: 1   MSQAIHLLPRNPTGGKFEVGEVFFFVEGFGLSDSRCLPCSGVSGRAASFSFRSLCAEHGI 60

Query: 61  NAAVKFRPVNCTLLRASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDE 120
           N  VKFRP+NCT L  SFTC+ASS GHR+  DF KQNR GYSRSRNRQNE+R+SLE+VDE
Sbjct: 61  NVPVKFRPLNCTSLGVSFTCKASS-GHRRNPDFPKQNRQGYSRSRNRQNEERESLENVDE 120

Query: 121 SDLLSSKNGPFLSISSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQG 180
           SDLLSS+NGP LSISS  KSQ TATPGPREKEIVELFRK+QAQLRERAAMKEEKK+EAQG
Sbjct: 121 SDLLSSRNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQG 180

Query: 181 QTKGSETVDSLLTLLRRHSVEQGKR---GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSS 240
           QTKGSETVDSLL LLR+H+VEQGKR    GG  KD SFNHVKENGPYDEG+ SSIFGLS 
Sbjct: 181 QTKGSETVDSLLKLLRKHAVEQGKRSSGAGGSNKDISFNHVKENGPYDEGRGSSIFGLSP 240

Query: 241 HLREKAQEPTGSSLSRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTET 300
           +LREKAQEP G S  RP SNFQR+SPVP VKYQP+ P E+IV+S + +NSKG+KLNGTET
Sbjct: 241 NLREKAQEPAG-SFRRPASNFQRRSPVPRVKYQPIYPGESIVDSTNGMNSKGMKLNGTET 300

Query: 301 GSQLKAKVWTRQESEREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEME 360
           GSQLKAKVWTRQESEREHWEELQSQ +TEQ  EPE DQEFE+EPE E +Y+LEHE DEME
Sbjct: 301 GSQLKAKVWTRQESEREHWEELQSQRDTEQ--EPEVDQEFEMEPEAE-TYDLEHEADEME 360

Query: 361 PELLNLLGV----DDTFDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMK 411
           PEL+NLLGV    DDTF++D+K +E+FSK  +HE+LNSLKLAELRAIAKSRSL+GFSKMK
Sbjct: 361 PELVNLLGVSSDIDDTFEDDIKDNEEFSKHGEHENLNSLKLAELRAIAKSRSLRGFSKMK 420

[Close]

BLAST of CmaCh19G000920 vs. NCBI nr
Match: XP_022967671.1 (rho-N domain-containing protein 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 775.8 bits (2002), Expect = 1.9e-220
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP 240
           LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP
Sbjct: 181 LRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRP 240

Query: 241 VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE 300
           VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE
Sbjct: 241 VSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESERE 300

Query: 301 HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV 360
           HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV
Sbjct: 301 HWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDV 360

Query: 361 KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 KHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 412

[Close]

BLAST of CmaCh19G000920 vs. NCBI nr
Match: XP_022963933.1 (rho-N domain-containing protein 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 751.5 bits (1939), Expect = 3.8e-213
Identity = 404/414 (97.58%), Postives = 407/414 (98.31%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKR--GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLS 240
           LRRHSVEQGKR  GGGGVKDSS NHVKENGPYDEGKSSSIFGLSSHLREKAQEP GSSLS
Sbjct: 181 LRRHSVEQGKRGGGGGGVKDSSLNHVKENGPYDEGKSSSIFGLSSHLREKAQEPAGSSLS 240

Query: 241 RPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE 300
           RPVSNFQRKSPVPVVKYQP+SP E+IVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE
Sbjct: 241 RPVSNFQRKSPVPVVKYQPISPGESIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESE 300

Query: 301 REHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE 360
           REHWEELQSQGETEQ  EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE
Sbjct: 301 REHWEELQSQGETEQ--EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDE 360

Query: 361 DVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           DVKHDEKFSK+DDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 DVKHDEKFSKNDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 412

[Close]

BLAST of CmaCh19G000920 vs. NCBI nr
Match: KAG6571526.1 (Rho-N domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 750.7 bits (1937), Expect = 6.5e-213
Identity = 404/415 (97.35%), Postives = 407/415 (98.07%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKR---GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSL 240
           LRRHSVEQGKR   GGGGVKDSS NHVKENGPYDEGKSSSIFGLSSHLREKAQEPTG SL
Sbjct: 181 LRRHSVEQGKRGGGGGGGVKDSSLNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGLSL 240

Query: 241 SRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES 300
           SRPVSNFQRKSPVPVVKYQP+SP E+IVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES
Sbjct: 241 SRPVSNFQRKSPVPVVKYQPISPGESIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES 300

Query: 301 EREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFD 360
           EREHWEELQSQGETEQ  EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFD
Sbjct: 301 EREHWEELQSQGETEQ--EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFD 360

Query: 361 EDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           EDVKHDEKFSK+DDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 EDVKHDEKFSKNDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413

[Close]

BLAST of CmaCh19G000920 vs. NCBI nr
Match: KAG7011270.1 (Rho-N domain-containing protein 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 750.0 bits (1935), Expect = 1.1e-212
Identity = 403/416 (96.88%), Postives = 408/416 (98.08%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKR----GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSS 240
           LRRHSVEQGKR    GGGGVKDSS NHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSS
Sbjct: 181 LRRHSVEQGKRGGGGGGGGVKDSSLNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSS 240

Query: 241 LSRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQE 300
           LSRPVSNFQRKSPVPVVKYQP+SP E+IVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQE
Sbjct: 241 LSRPVSNFQRKSPVPVVKYQPISPGESIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQE 300

Query: 301 SEREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTF 360
           SEREHWEELQSQGETEQ  EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTF
Sbjct: 301 SEREHWEELQSQGETEQ--EPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTF 360

Query: 361 DEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           DEDVKHDEKFSK+DDH+DLNSLKLAELRAIAKSRSLKGFSKMKKSELV+LLSNAQV
Sbjct: 361 DEDVKHDEKFSKNDDHDDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSNAQV 414

[Close]

BLAST of CmaCh19G000920 vs. NCBI nr
Match: XP_023553735.1 (rho-N domain-containing protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 744.6 bits (1921), Expect = 4.6e-211
Identity = 403/417 (96.64%), Postives = 407/417 (97.60%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL
Sbjct: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI
Sbjct: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180
           SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL
Sbjct: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRERAAMKEEKKIEAQGQTKGSETVDSLLTL 180

Query: 181 LRRHSVEQGKR-----GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGS 240
           LRRHSVEQGKR     GGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGS
Sbjct: 181 LRRHSVEQGKRGGGGSGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGS 240

Query: 241 SLSRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQ 300
           SLSRPVSNFQRKSPVPVVKYQP+SP E+I+NSIDVVNSKGLKLNGTETGSQLKAKVWTRQ
Sbjct: 241 SLSRPVSNFQRKSPVPVVKYQPISPGESILNSIDVVNSKGLKLNGTETGSQLKAKVWTRQ 300

Query: 301 ESEREHWEELQSQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDT 360
           ESEREHWEELQSQGETEQ  EPEPDQEFELEPEPE SYELEHEPDEMEPELLNLLGVDDT
Sbjct: 301 ESEREHWEELQSQGETEQ--EPEPDQEFELEPEPE-SYELEHEPDEMEPELLNLLGVDDT 360

Query: 361 FDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 413
           FDEDVKHD KFSK+DDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV
Sbjct: 361 FDEDVKHDGKFSKNDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRLLSNAQV 414

[Close]

BLAST of CmaCh19G000920 vs. TAIR 10
Match: AT1G06190.1 (Rho termination factor )

HSP 1 Score: 213.8 bits (543), Expect = 2.7e-55
Identity = 179/423 (42.32%), Postives = 243/423 (57.45%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MS   HL  +   G+ LSDSRC   S V  R   +   S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVP-----N 62

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           R+SF C+ASSGG+R+  DFS+ N+HGY R  NRQ+  R+  + ++ SD+LSS+NGP  ++
Sbjct: 63  RSSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRER-AAMKEEKKIE--AQGQTKGSETVDSL 180
           SS+ K Q T++PGPREKEIVELFRK+QAQLR R AA KEEKKIE  ++GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LTLLRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSL 240
           L LLR+HS EQ KR     K SS   V+ +    + ++ ++      +    ++   SS 
Sbjct: 183 LKLLRKHSGEQSKRQVS--KFSSQGEVQGDTVDKQDRTGNL------VTSGNKDNNASSF 242

Query: 241 SRPVSNFQRKSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQES 300
           +RP S+F+RKSPVP  +  P    E    + D  +S  +      T +Q K  V    E 
Sbjct: 243 TRPTSSFRRKSPVPRSQSPPAYSSE---ATFDQSSSYSV------TWTQKKDTVELHDEP 302

Query: 301 EREHWEELQSQGETEQETEP-----EPDQEFELEPEPESSYELEHEPD------EMEPEL 360
           E E   E + + E E E  P     EPD   EL+PE  S Y+ E + D        +  +
Sbjct: 303 EHEPAYEHEHEPENESEPGPVTTMLEPDS--ELKPESSSFYQEEEDDDVTFDVLSQDDGI 362

Query: 361 LNLLGVDDTFDEDVKHDEKFSKDDDHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVRL 410
           L++L  DD   +D   D   ++++  +DL+ LKL ELR IAKSR LKG SKMKK+ELV L
Sbjct: 363 LDVLSDDDESLDDADEDSDEAEEEAVKDLSELKLVELRGIAKSRGLKGLSKMKKAELVEL 398

[Close]

BLAST of CmaCh19G000920 vs. TAIR 10
Match: AT1G06190.2 (Rho termination factor )

HSP 1 Score: 172.9 bits (437), Expect = 5.2e-43
Identity = 122/265 (46.04%), Postives = 164/265 (61.89%), Query Frame = 0


Query: 1   MSQLPHLLPNNATGFGLSDSRCLPCSGVFGRAATVSSRSLCTEHRINAAVKFRPVNCTLL 60
           MS   HL  +   G+ LSDSRC   S V  R   +   S C +H+ N  +K  P      
Sbjct: 3   MSGTFHLTSDYVPGYTLSDSRCFFNSAVSRRTLAILPCSSCLDHK-NGRLKSVP-----N 62

Query: 61  RASFTCQASSGGHRKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVDESDLLSSKNGPFLSI 120
           R+SF C+ASSGG+R+  DFS+ N+HGY R  NRQ+  R+  + ++ SD+LSS+NGP  ++
Sbjct: 63  RSSFVCRASSGGYRRNPDFSRLNKHGY-RGNNRQSGGREDFD-IENSDMLSSRNGPLFNL 122

Query: 121 SSNSKSQTTATPGPREKEIVELFRKIQAQLRER-AAMKEEKKIE--AQGQTKGSETVDSL 180
           SS+ K Q T++PGPREKEIVELFRK+QAQLR R AA KEEKKIE  ++GQ K SETVDSL
Sbjct: 123 SSSPKFQATSSPGPREKEIVELFRKVQAQLRARAAAKKEEKKIEEASKGQGKESETVDSL 182

Query: 181 LTLLRRHSVEQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSL 240
           L LLR+HS EQ KR     K SS   V+ +    + ++ ++      +    ++   SS 
Sbjct: 183 LKLLRKHSGEQSKRQVS--KFSSQGEVQGDTVDKQDRTGNL------VTSGNKDNNASSF 242

Query: 241 SRPVSNFQRKSPVPVVKYQPVSPRE 263
           +RP S+F+RKSPVP  +  P    E
Sbjct: 243 TRPTSSFRRKSPVPRSQSPPAYSSE 251

[Close]

BLAST of CmaCh19G000920 vs. TAIR 10
Match: AT2G31150.1 (ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism )

HSP 1 Score: 106.3 bits (264), Expect = 6.0e-23
Identity = 116/316 (36.71%), Postives = 163/316 (51.58%), Query Frame = 0


Query: 74  RKYSDFSKQNRHGYSRSRNRQNEDRDSLEHVD---ESDLLSSKNGPFLSISSNSKSQTTA 133
           R   DFS+ N+HG+ R RNR+NED+D L  VD   E D+LSSKN                
Sbjct: 28  RNNPDFSRNNKHGF-RGRNRRNEDKDGL--VDGGLEDDMLSSKN---------------- 87

Query: 134 TPGPREKEIVELFRKIQAQLRER-AAMKEEKKIEAQGQTKG---SETVDSLLTLLRRHSV 193
                EKEIVELF+K+Q QLR R AA KEEKK E   + +G   SETVDSLL LLR+HS 
Sbjct: 88  -----EKEIVELFKKVQVQLRARAAAKKEEKKTEEASKGQGGKESETVDSLLKLLRKHSG 147

Query: 194 EQGKRGGGGVKDSSFNHVKENGPYDEGKSSSIFGLSSHLREKAQEPTGSSLSRPVSNFQR 253
           EQ K+     + S+FN  K+    D+  S      SS    + ++   +  +RP S+F+R
Sbjct: 148 EQSKK-----QVSNFNSEKQL-QRDDDASERQNHSSSRFDSRNKDHNATPFTRPASSFKR 207

Query: 254 KSPVPVVKYQPVSPRENIVNSIDVVNSKGLKLNGTETGSQLKAKVWTRQESEREHWEELQ 313
            SPVP  K Q     E I    D  +S  +               WT+++      ++++
Sbjct: 208 NSPVPRHKSQASYSSEAI---FDEASSYSV--------------TWTQKK------DQVE 267

Query: 314 SQGETEQETEPEPDQEFELEPEPESSYELEHEPDEMEPELLNLLGVDDTFDEDVKHDEKF 373
           S+ E E E EPE   E++ EPEPE+ YE E EP+    E ++ L ++  + E+ + +E  
Sbjct: 268 SRDEPEYEPEPESAAEYD-EPEPEAEYEPESEPELAILESVSELKLESFYQEEDEDEEDH 289

Query: 374 S-----KDDDHEDLNS 378
           +       DD E LN+
Sbjct: 328 NFVIDELSDDDESLNT 289

The following BLAST results are available for this feature:

BLAST of CmaCh19G000920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94K75	3.7e-54	42.32	Rho-N domain-containing protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q8L4E7	1.4e-40	36.93	SAP-like protein BP-73 OS=Oryza sativa subsp. japonica OX=39947 GN=BP-73 PE=1 SV...	[more]

BLAST of CmaCh19G000920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HST4	9.1e-221	100.00	rho-N domain-containing protein 1, chloroplastic-like OS=Cucurbita maxima OX=366...	[more]
A0A6J1HJC1	1.8e-213	97.58	rho-N domain-containing protein 1, chloroplastic-like OS=Cucurbita moschata OX=3...	[more]
A0A1S3BHF2	2.8e-161	77.70	rho-N domain-containing protein 1, chloroplastic isoform X7 OS=Cucumis melo OX=3...	[more]
A0A0A0L7X8	3.1e-160	76.96	Rho_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G384780 PE=4 ...	[more]
A0A1S4DXI1	2.2e-158	75.17	rho-N domain-containing protein 1, chloroplastic isoform X4 OS=Cucumis melo OX=3...	[more]

BLAST of CmaCh19G000920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967671.1	1.9e-220	100.00	rho-N domain-containing protein 1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022963933.1	3.8e-213	97.58	rho-N domain-containing protein 1, chloroplastic-like [Cucurbita moschata]	[more]
KAG6571526.1	6.5e-213	97.35	Rho-N domain-containing protein 1, chloroplastic, partial [Cucurbita argyrosperm...	[more]
KAG7011270.1	1.1e-212	96.88	Rho-N domain-containing protein 1, chloroplastic [Cucurbita argyrosperma subsp. ...	[more]
XP_023553735.1	4.6e-211	96.64	rho-N domain-containing protein 1, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]

BLAST of CmaCh19G000920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G06190.1	2.7e-55	42.32	Rho termination factor	[more]
AT1G06190.2	5.2e-43	46.04	Rho termination factor	[more]
AT2G31150.1	6.0e-23	36.71	ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative ...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 139..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..109
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..347
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 188..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..291
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..308
None	No IPR available	PANTHER	PTHR34449	RHO TERMINATION FACTOR	coord: 1..411
None	No IPR available	PANTHER	PTHR34449:SF5	RHO-N DOMAIN-CONTAINING PROTEIN 1, CHLOROPLASTIC	coord: 1..411
IPR011112	Rho termination factor, N-terminal	SMART	SM00959	Rho_N_2_a	coord: 374..411 e-value: 0.003 score: 26.8
IPR011112	Rho termination factor, N-terminal	PFAM	PF07498	Rho_N	coord: 374..405 e-value: 4.7E-7 score: 29.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000920.1	CmaCh19G000920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006353	DNA-templated transcription, termination