CmaCh19G000800 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000800
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	LOB domain-containing protein
Location	Cma_Chr19: 461193 .. 462916 (-)
RNA-Seq Expression	CmaCh19G000800
Synteny	CmaCh19G000800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAACCCCAAAAAAAAACAACAAAAAAACCCCAAAAGATCTCTCCAAGTACCAAAAAAAATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGTAAGTTCTTGAGAAGAAAATGTGTCAGAGGCTGCGTTTTTGCGCCATATTTCTGCCATGAACAAGGCGCTACTCATTTTGCTGCTATTCATAAGGTGTTTGGTGCTAGCAATGTGTCTAAGCTTCTTGCTCGGTTGCCTGTTAGTGAGCGCTGTGAGGCTGCGGTTACTATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTGATTCTTCGTCTTTGTGTTTTTCTTTTCAATTCGAATGATGGGTCGCGGGAAAGATTTGAACTTTGACCTTAATTCATTTTCAAATTGGGAGATCCCACGTCGGTTTTGGAGGAGAAGGAAATACCCTTTAATAGGGTGTGGAAACCTCTCCGACGCGTTTTAAAAATATTATTTTTCTTTTCAATTCGAAGAATGGGTCGAGGGAAAGATTCGAACTTTGACCCTAATTAATTCTTAAACTGTGAGATCCCACATCGGTTGGAGAGAAGAATGAAACATTCTTTAGAAGGGTGTAGAAAACTCTCCCTGACAGACACATTTTAAACACTCTTTTTCTTTTCAATTTGAATAATGGGTCGAGGGAAAGATTCGAACTTTGACCTTAATTAATTCTTAAACTGTGAGATCTCACGTCGGTTGGGGAGGAGAAAGAAACATCGGTTGGGGAGGAGAAAGAAACATTATTTATAAGGGTGTGGAAAACTCTCTCTATCAGATGCATTTTAAAATCACTCTTTTTCTTTTCAATTTGAATATGGGTAGAGGGAAAGATTCGAACTTTGACCTTAATTCATTCTCTGAGATTCCATGTCGGTTGAGGAAGATAACAAAACATTCTTTATATGGGTGTGAAAAATTCTCTCTAGCAGACGGGTTTCAAAAACACCCTCTTTCTTTTCAATTCGAATAATGGGTTGTGGGGAAGATTCAAGGAGAACGAAACACTTTTAACAAGGGCGTGAAAAGTCGAAAAAGTCCAAATAAGACAATATCTGTAATAACTAACGTTTGGTCATTACGCATTAAAACCCTAATTCACCTCGTTTGTAAGATTAAATTTACTATAACTCATTAAAGCTTATTTATTTATTTTTTCAGGTTGTGAGTCTTCAAGCACAACTAGCTTCTCTTAAGGAACAAGCAGCAGAAAACATGATGAACGTGTCTGGTAATAGAGGTGAGGCTGAGAAGAATAGCAGAAAGGTTCCTTGTCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGAGCAACCGAACGTAATGCTCGAGTTCAATCCGAATCCGACTCGGAATAATTCGGCATCGAACCCTTATTATGATGAGAATTATAGCATTATGGTTAACTCTCAGTCCAATGAGAACTATGAGCATCACATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCTATGTATACTCTTGATCACTTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGTAATAGGCATTGGTAAGAGAGAGAGTGAGAGGAGAGAGAAAGGAATTTGAATTGAATCACAGTTGGAAATTATTAATGGAA

mRNA sequence

GGAAACCCCAAAAAAAAACAACAAAAAAACCCCAAAAGATCTCTCCAAGTACCAAAAAAAATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGTAAGTTCTTGAGAAGAAAATGTGTCAGAGGCTGCGTTTTTGCGCCATATTTCTGCCATGAACAAGGCGCTACTCATTTTGCTGCTATTCATAAGGTGTTTGGTGCTAGCAATGTGTCTAAGCTTCTTGCTCGGTTGCCTGTTAGTGAGCGCTGTGAGGCTGCGGTTACTATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTAGCTTCTCTTAAGGAACAAGCAGCAGAAAACATGATGAACGTGTCTGGTAATAGAGGTGAGGCTGAGAAGAATAGCAGAAAGGTTCCTTGTCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGAGCAACCGAACGTAATGCTCGAGTTCAATCCGAATCCGACTCGGAATAATTCGGCATCGAACCCTTATTATGATGAGAATTATAGCATTATGGTTAACTCTCAGTCCAATGAGAACTATGAGCATCACATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCTATGTATACTCTTGATCACTTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGTAATAGGCATTGGTAAGAGAGAGAGTGAGAGGAGAGAGAAAGGAATTTGAATTGAATCACAGTTGGAAATTATTAATGGAA

Coding sequence (CDS)

ATGACAGGTTCTGGTTCTCCCTGTGGAGCCTGTAAGTTCTTGAGAAGAAAATGTGTCAGAGGCTGCGTTTTTGCGCCATATTTCTGCCATGAACAAGGCGCTACTCATTTTGCTGCTATTCATAAGGTGTTTGGTGCTAGCAATGTGTCTAAGCTTCTTGCTCGGTTGCCTGTTAGTGAGCGCTGTGAGGCTGCGGTTACTATCTCTTATGAAGCTCAAGCTAGGCTTCAAGATCCTATCTATGGCTGTGTTTCTCATATCTTTGCCCTCCAACAACAGGTTGTGAGTCTTCAAGCACAACTAGCTTCTCTTAAGGAACAAGCAGCAGAAAACATGATGAACGTGTCTGGTAATAGAGGTGAGGCTGAGAAGAATAGCAGAAAGGTTCCTTGTCATCCACAAGATCTCCATAGCTGGTTTCAGTCGGAGCAACCGAACGTAATGCTCGAGTTCAATCCGAATCCGACTCGGAATAATTCGGCATCGAACCCTTATTATGATGAGAATTATAGCATTATGGTTAACTCTCAGTCCAATGAGAACTATGAGCATCACATGGCTAAAATGGAGGAAAGTGGATCATATGGAAGCTTTGAAGAAACCTCAGGCTATTCTATGTATACTCTTGATCACTTGCATTCAAATGTTCAACAATGGAGCTTCAATGAGTCTGCTGATGATTTACAATCAGTTGCTTTTGGTAATAGGCATTGGTAA

Protein sequence

MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRGEAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW

Homology

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BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.2e-50
Identity = 106/191 (55.50%), Postives = 136/191 (71.20%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LP+S+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMM----NVSG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA++M+      S 
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 NRGEAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT--RNNSASNPYYDENYSIMVN 181
           N      ++ K P H    + +   +Q +++ +   + T    ++  + Y++E  S M  
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSGMGE 185

Query: 182 SQSNENYEHHM 187
                + E H+
Sbjct: 186 FSIYSDLEQHL 196

[Close]

BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-49
Identity = 96/112 (85.71%), Postives = 105/112 (93.75%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTG GSPCGACKFLRRKCVRGCVFAPYFCHEQGA HFAAIHKVFGASNVSKLLA LP+++
Sbjct: 1   MTGFGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLAD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENM 113
           R EAAVTISYEAQARL+DPIYGCV+HIFALQQQV++LQAQLASLK  AA+ +
Sbjct: 61  RPEAAVTISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQGI 112

[Close]

BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 4.4e-47
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNV 116
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA ++MM +
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAI 115

[Close]

BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.0e-43
Identity = 98/185 (52.97%), Postives = 124/185 (67.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+           
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRFPQDDPGCN 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNP--NPTRNNSASNPYYDENYSIMVNSQS 180
             ++        PQDLH+WF   Q  +  +F+P    TR+N  S    D N S   +++S
Sbjct: 121 MKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERS---MDHNESPCSSNES 180

Query: 181 NENYE 184
              Y+
Sbjct: 181 LNYYQ 180

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BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot
Match: Q9SLB7 (LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.5e-39
Identity = 95/201 (47.26%), Postives = 120/201 (59.70%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +P+ +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRGEA 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A +  + +G+   +
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 EKNSRKVPCHPQ-------DLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVN 182
            +++ +     Q         +S   +         NPN   +  +S      N S  V 
Sbjct: 131 SESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSNTSSDVT 190

Query: 183 SQSNENYEHHMAKMEESGSYG 197
           + +N    HH       G YG
Sbjct: 191 TTANVRETHHQT---GGGVYG 208

[Close]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL
Match: A0A6J1HQS1 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111466949 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.2e-133
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180
           EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE
Sbjct: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180

Query: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 239
           NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW
Sbjct: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238

[Close]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL
Match: A0A6J1HFS0 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463902 PE=3 SV=1)

HSP 1 Score: 484.2 bits (1245), Expect = 3.2e-133
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180
           EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE
Sbjct: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180

Query: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 239
           NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW
Sbjct: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238

[Close]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL
Match: A0A1S3BHF9 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 5.6e-114
Identity = 216/243 (88.89%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 239
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

[Close]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL
Match: A0A0A0L817 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV=1)

HSP 1 Score: 417.5 bits (1072), Expect = 3.6e-113
Identity = 214/243 (88.07%), Postives = 223/243 (91.77%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 239
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

[Close]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL
Match: A0A6J1K2M2 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111491155 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.3e-110
Identity = 209/241 (86.72%), Postives = 219/241 (90.87%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGA+HFAAIHKVFGASNVSKLLARLPV+E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGASHFAAIHKVFGASNVSKLLARLPVTE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE+MMN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESMMNSSSNNG 120

Query: 121 EA--EKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQS 180
               EKN RK+P H QDLH+WFQS+  NV   FNPNPT+ +SASNPYYDENY IM+NSQS
Sbjct: 121 GGVNEKNCRKIPSHFQDLHNWFQSDHSNVTPGFNPNPTQ-DSASNPYYDENYRIMINSQS 180

Query: 181 NENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN-RH 239
           N NYEHHMAKMEESGSYGSFEETS YSMYTLDHLHSNVQQWSFNES DDLQSVAFG+ R 
Sbjct: 181 NGNYEHHMAKMEESGSYGSFEETSDYSMYTLDHLHSNVQQWSFNESPDDLQSVAFGHARR 240

[Close]

BLAST of CmaCh19G000800 vs. NCBI nr
Match: XP_022963632.1 (LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB domain-containing protein 29-like [Cucurbita maxima] >KAG6571512.1 LOB domain-containing protein CRL1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011260.1 LOB domain-containing protein 29, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 484.2 bits (1245), Expect = 6.5e-133
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180
           EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE
Sbjct: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180

Query: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 239
           NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW
Sbjct: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238

[Close]

BLAST of CmaCh19G000800 vs. NCBI nr
Match: XP_023511754.1 (LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 481.1 bits (1237), Expect = 5.5e-132
Identity = 237/238 (99.58%), Postives = 237/238 (99.58%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180
           EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE
Sbjct: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVNSQSNE 180

Query: 181 NYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 239
           NYEHHMAKMEESGSY SFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW
Sbjct: 181 NYEHHMAKMEESGSYESFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGNRHW 238

[Close]

BLAST of CmaCh19G000800 vs. NCBI nr
Match: XP_038888992.1 (LOB domain-containing protein 14-like [Benincasa hispida])

HSP 1 Score: 427.2 bits (1097), Expect = 9.5e-116
Identity = 218/245 (88.98%), Postives = 223/245 (91.02%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP+SE
Sbjct: 26  MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPISE 85

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN SGN G
Sbjct: 86  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASGNGG 145

Query: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNP---TRNNSASN--PYYDENYSIM 180
              +  NSRKVP HPQDLHSWFQSEQPN+ LEFNP P     NNSASN   YYDENY IM
Sbjct: 146 GVNEKINSRKVPSHPQDLHSWFQSEQPNITLEFNPTPIPNNNNNSASNYPNYYDENYHIM 205

Query: 181 VNSQSNENYEHHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAF 239
           VNS SN NYEHHMAKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSFNESADDLQSVAF
Sbjct: 206 VNSHSNGNYEHHMAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFNESADDLQSVAF 265

[Close]

BLAST of CmaCh19G000800 vs. NCBI nr
Match: XP_008447445.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 1.2e-113
Identity = 216/243 (88.89%), Postives = 224/243 (92.18%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKINSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNTNYYDENYRIMVNS 180

Query: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 239
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF++SADDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDSADDLQSVAFGN 240

[Close]

BLAST of CmaCh19G000800 vs. NCBI nr
Match: XP_004152038.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical protein Csa_010658 [Cucumis sativus])

HSP 1 Score: 417.5 bits (1072), Expect = 7.5e-113
Identity = 214/243 (88.07%), Postives = 223/243 (91.77%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLP++E
Sbjct: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPITE 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAE++MN S N G
Sbjct: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAESIMNASSNVG 120

Query: 121 EAEK--NSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT-RNNSASNP-YYDENYSIMVNS 180
              +  NSRKVP HPQDLHSWFQSEQPNV LEFNPNPT  NN ASN  YYDENY IMVNS
Sbjct: 121 GVNEKVNSRKVPSHPQDLHSWFQSEQPNVTLEFNPNPTPNNNCASNANYYDENYRIMVNS 180

Query: 181 QSNENYE-HHMAKMEESGSYGSFEETSGYSMYTLDHLHSNVQQWSFNESADDLQSVAFGN 239
           QSN NYE HH+AKMEESGSYGSFEETSGYSMYTLD LHSNVQQWSF+++ DDLQSVAFGN
Sbjct: 181 QSNGNYENHHIAKMEESGSYGSFEETSGYSMYTLDQLHSNVQQWSFSDTVDDLQSVAFGN 240

[Close]

BLAST of CmaCh19G000800 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 198.7 bits (504), Expect = 5.1e-51
Identity = 106/191 (55.50%), Postives = 136/191 (71.20%), Query Frame = 0


Query: 2   TGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSER 61
           + SGSPCGACKFLRRKC +GCVFAPYFCHEQGA+HFAAIHKVFGASN SKLL+ LP+S+R
Sbjct: 6   SSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPISDR 65

Query: 62  CEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMM----NVSG 121
           CEAA+TISYEAQARLQDPIYGCVSHIFALQQQVV+LQA+L  LK+QAA++M+      S 
Sbjct: 66  CEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPTSE 125

Query: 122 NRGEAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNPNPT--RNNSASNPYYDENYSIMVN 181
           N      ++ K P H    + +   +Q +++ +   + T    ++  + Y++E  S M  
Sbjct: 126 NPNSYYGDTTKAPYHHDHQNIYHHHDQTHLVYQTGSSGTVQHGDATESSYHNETSSGMGE 185

Query: 182 SQSNENYEHHM 187
                + E H+
Sbjct: 186 FSIYSDLEQHL 196

[Close]

BLAST of CmaCh19G000800 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 189.5 bits (480), Expect = 3.1e-48
Identity = 90/115 (78.26%), Postives = 103/115 (89.57%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           MTGSGSPCGACKFLRR+CV+GCVFAPYFCHEQGA+HFAAIH+VFGASN SKLL+ LP+ +
Sbjct: 1   MTGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMED 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNV 116
           R EAA TI YEAQAR QDPIYGCVSHIF+LQQQVV+LQ QL  LK+QA ++MM +
Sbjct: 61  RREAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMMAI 115

[Close]

BLAST of CmaCh19G000800 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 176.0 bits (445), Expect = 3.5e-44
Identity = 98/185 (52.97%), Postives = 124/185 (67.03%), Query Frame = 0


Query: 1   MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSE 60
           M G GSPCG CKFLRRKCV GCVFAPYFC+E+G+++FAAIHKVFGASN SKL++ LP  +
Sbjct: 1   MGGLGSPCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHD 60

Query: 61  RCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRG 120
           RC+A  TISYEA +RL DPIYGCVS IF+LQQQVVSLQAQ+  L+E+A+           
Sbjct: 61  RCDAVRTISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASRRFPQDDPGCN 120

Query: 121 EAEKNSRKVPCHPQDLHSWFQSEQPNVMLEFNP--NPTRNNSASNPYYDENYSIMVNSQS 180
             ++        PQDLH+WF   Q  +  +F+P    TR+N  S    D N S   +++S
Sbjct: 121 MKQQEKVLAQQMPQDLHNWF--HQGILDSDFDPMSGTTRDNERS---MDHNESPCSSNES 180

Query: 181 NENYE 184
              Y+
Sbjct: 181 LNYYQ 180

[Close]

BLAST of CmaCh19G000800 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 162.2 bits (409), Expect = 5.3e-40
Identity = 95/201 (47.26%), Postives = 120/201 (59.70%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERC 62
           G+GSPCGACKFLRRKC   C+FAPYF  EQGA  FAAIHKVFGASNVSKLL  +P+ +RC
Sbjct: 11  GTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHDRC 70

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAAENMMNVSGNRGEA 122
           EA VTI+YEAQARL DP+YGCVSHIFALQQQV  LQ+Q+  +K Q A +  + +G+   +
Sbjct: 71  EAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLRHS 130

Query: 123 EKNSRKVPCHPQ-------DLHSWFQSEQPNVMLEFNPNPTRNNSASNPYYDENYSIMVN 182
            +++ +     Q         +S   +         NPN   +  +S      N S  V 
Sbjct: 131 SESTNQFMTWQQTSVSPIGSAYSTPYNHHQPYYGHVNPNNPVSPQSSLEESFSNTSSDVT 190

Query: 183 SQSNENYEHHMAKMEESGSYG 197
           + +N    HH       G YG
Sbjct: 191 TTANVRETHHQT---GGGVYG 208

[Close]

BLAST of CmaCh19G000800 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 160.6 bits (405), Expect = 1.5e-39
Identity = 76/107 (71.03%), Postives = 90/107 (84.11%), Query Frame = 0


Query: 3   GSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLARLPVSERC 62
           G G PCGACKFLRRKCV GC+FAPYF  EQG+ +FAA+HKVFGASNVSKLL  +PV  R 
Sbjct: 33  GGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPVHRRS 92

Query: 63  EAAVTISYEAQARLQDPIYGCVSHIFALQQQVVSLQAQLASLKEQAA 110
           +A VTI YEAQAR++DPIYGCV+HIFALQQQVV+LQA+++ L+   A
Sbjct: 93  DAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLA 139

The following BLAST results are available for this feature:

BLAST of CmaCh19G000800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2J7	7.2e-50	55.50	LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S...	[more]
Q5UG13	2.7e-49	85.71	LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C...	[more]
Q9SLB6	4.4e-47	78.26	LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S...	[more]
Q9SJW5	5.0e-43	52.97	LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S...	[more]
Q9SLB7	7.5e-39	47.26	LOB domain-containing protein 16 OS=Arabidopsis thaliana OX=3702 GN=LBD16 PE=1 S...	[more]

BLAST of CmaCh19G000800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQS1	3.2e-133	100.00	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11146694...	[more]
A0A6J1HFS0	3.2e-133	100.00	LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111463...	[more]
A0A1S3BHF9	5.6e-114	88.89	LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489890 PE=3 SV...	[more]
A0A0A0L817	3.6e-113	88.07	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G396920 PE=3 SV...	[more]
A0A6J1K2M2	1.3e-110	86.72	LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149115...	[more]

BLAST of CmaCh19G000800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963632.1	6.5e-133	100.00	LOB domain-containing protein 29-like [Cucurbita moschata] >XP_022967412.1 LOB d...	[more]
XP_023511754.1	5.5e-132	99.58	LOB domain-containing protein 29-like [Cucurbita pepo subsp. pepo]	[more]
XP_038888992.1	9.5e-116	88.98	LOB domain-containing protein 14-like [Benincasa hispida]	[more]
XP_008447445.1	1.2e-113	88.89	PREDICTED: LOB domain-containing protein 29 [Cucumis melo]	[more]
XP_004152038.1	7.5e-113	88.07	LOB domain-containing protein 29 [Cucumis sativus] >KGN57933.1 hypothetical prot...	[more]

BLAST of CmaCh19G000800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58190.1	5.1e-51	55.50	lateral organ boundaries-domain 29	[more]
AT2G42440.1	3.1e-48	78.26	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G31310.1	3.5e-44	52.97	LOB domain-containing protein 14	[more]
AT2G42430.1	5.3e-40	47.26	lateral organ boundaries-domain 16	[more]
AT2G45420.1	1.5e-39	71.03	LOB domain-containing protein 18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..114
None	No IPR available	PANTHER	PTHR31529:SF41	LOB DOMAIN-CONTAINING PROTEIN-RELATED	coord: 1..235
None	No IPR available	PANTHER	PTHR31529	LOB DOMAIN CONTAINING PROTEIN	coord: 1..235
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 7..105 e-value: 5.3E-36 score: 123.2
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 6..108 score: 22.110901

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000800.1	CmaCh19G000800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009755	hormone-mediated signaling pathway
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus