CmaCh19G000550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Tryptophan synthase
Location	Cma_Chr19: 301859 .. 305758 (+)
RNA-Seq Expression	CmaCh19G000550
Synteny	CmaCh19G000550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCTTCGCAAGATTTCAGTCGTCCAGTCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATCGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTAAATTTGTTCAACCATTTATTATCTCCAACATTAATTTTTTGACATTTCGTTTTTGGGTTGTTTGTTTATATTTGCTCTTGTTTTGTTGAATTATACTTCTTCTGCATTTTGGTGTTCACTGTTTGATACTCTTGAGAGTCATCATTTCAACTCAATCTAATCAATCCAAGTCTTTACTGGGTTAAATTCTTTCACCAATGCTTAATTGGGATTGATCACGAGATGGGTTAGAGTTCTTCATTCATCAATGTTGTTCTAAATTCATACATGTTTTAAAGGTCGCGTTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCCGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGTTGAATATCTCTCTCTCCCTTCATTTTTTTTTTCATTCTTAATGTATTGTTCCTTATTCAATTGTCTTTGAATTCTTTCTGTAGGCTGCAGCAACTCGGTCCTTGGCTAGGGGGACAAATTTTAGTGCAATTATTTCTATGCTGAAGGAGGTAATCTCGTTGTACCATGCAACATGCTGTTGATAATATTAATAGTTCTTCCTCTTCCAATTTTGATCTCAAATTATTTTAGGTAATAGAAAGAATAACCCAAAATTATTTCATTTGTTACTTATATAATGACTTAAGGCACGCCAAATGTGTTATTTTGCGAACTAGGTATAATGAGGTATAGTAACCTAGTCATTAACATTTAAGGTTGTCGTTTGAGAATTTGTTTAATTAGATAATACTGGAACGGAGTCACACTAGAAGCTGCATTTCACCAGGCTGTAAAATTTGCCTAAAACGAAGAAATATGTACGTGTATACTTAAATTAGCTCTTGCACTTCTTTTTCGTTAGGAAACTTGAGTTCTCATGCACGGCATCATCAAATTAAATGTCTTTTGGAATAAGCTTCTGTCTCTATATGCTTCACTGCCATTTAGTTTCTCATTAATGGAATTGAAAGTTGACATATTTTTGTTTTGTTTCCTGCTGCTTAGGTTATTCCTGAACTGTCTTGCCCTGTTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGTAATTAATGAATTAGATAATACTTTTTTATCAATTTTTTTTGCCCTACTTTCAAGATAACATGACAATTAGGCCAATTGTCTGGTACTAAATGTTATGGGTTGGCATTTGCTCTAACTTGCATAGAAATGTTGGTTTATTTACTAGAACATCATTAAATTGTCATTTTCTTTACCCCAGAGAACACGGTACAAAGCTGAAGTATGTATTAAACAATAATTATGGTTTTGGGCCTATTATATCATTGCTTAATGAACATGATATTCCAAAATCCTTGTTTCAAATTTATTTGTGCACTTGGTGTGAGGTTCTAATGAGCTTGTTTCTCAAATCATGAACTTTGTGAACAACTTCTTGTCTCTTAATGAGAAAAGAGAGGACAGAGGCATATAGGAAGATTATCTGTCTGTTTCACTATTATGTGATTATCTAACTTAATATCATCACCTTCGTGATGAGTCGATGACTATTTGAAAGTGAATAATGTTACAACTCTAAATGTAACTTTTCTTGCTTTACAAACTTCCATGGAAAGAAACCCTTCTGAATCTTCGGTTTGTGAATATGTGTGTAATTACATTGCACTTTCTTGCAGGGCTTGTTGTTCCGGATGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAATATCGAGCTGGTGAATTCCTTTTCTCATAATGGTTGTATTATCTAAATTGATTATTAGTTTTAGGTTTTTGATATTTATTTATGATTTTTACTTAAAGATATTGCACATAGTGGCAAAAACAACCTCTGAAATGGACCTAGCAAATGGAACAGTCCAAAGATCTTGATTACTTCCCCATTGATTCTACACGTAAATTAGGGACATAATATGCAGTGCTGAAGATTAGTATATTATTACTTGGTTGAACCTGCAGAGTATCCGGTTTTCTTGATCACGATTGTTAAGGCGGAAAACAGTTGCCTTGAGTACTGAAAATTATTTGATTGTTGAACTGTACTTCCCTGCATTCTTTTCATTATCTGTAGAATGAAATTATTAAGGTAAAAAGTAGCCAATTCATGACTCGTTTGTCTAAAGATAGGATGATTTGTTGTTATACATCATCCATTTGTGTGGTAATGCTTTGTTCACGAAATCAGAAGAACATGCAGAGTGTATTGTTTCTAGATATTTGCTGGTTCTTATGGACTTTGTACGCTGCTAAAGGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCGATCGTCGAAGCTTCAGAGGGATTTGTGTATCTTGTAAGACCTTTTTCTGTTTTTGTCTCTTTATATGCATATAAGTTGTAGCTTTTTCATCTCATTTTAAGGCTTCTATGTCACTCATAAATGACAATACTAGGTTTTTTTTCTCTTTTTTCTGGATTCAATATTCAAATAAATTTTAAGAATGGTATTTTAACAATGCGATTATTTTCAGAACCCTCTTTTTGATGGAGTTTAGTTAGAGAATAACCACAGAATTGTGTAGGGAGAAGAGAGATTGTTTTCGGTTTTGTCGGAGCATATTGCTTTAATTGCTTTGTTTCCATGCACAAACGGAATGATAGATTGCATTGAAAAAACAAGAATTTTTGGTGAAGATAGTAAATTACAGCTATTCTCTATGTTACTTCCTGTATTTACCATTGAGATAGAGTCAAATTACGATGTCCTTCTCTGTCCGACTTGCAATATGAAATTTGTTCTCGTTCAATTATAGGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGTGCATCTTCTTCAGTCTTAATAACTATCTAGGATGTACTTGTAATAGCTACAAATTTGAAAGCTGATGACTTTGAAACCAATCAATAACATAAGCCTCACACTCTCTACTCTGTTTGGCAGGCAACAGAAAAACCAGTGGCAGTAGGTTTTGGTATATCAAAACCTGAGCACGTGAAACAGGTAAAAGAATTTCGTCATACACCGAAACAGTTCACTTCTCCTGCATTTTTTCTGGATAATATGTTGTCGTGTTCGTCCATAGGTGGCCAACTGGGGGGCTGATGGAATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCCCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAATTTTTGATGGAATAAGAGGTCAGCTAGCTCTGTCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTGAAAGATTTCTCTTTCCTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGTGTGTTCTTTCTTTCCTCTGCCTGATTCGATTCAAGTGAAGCTGGATGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTCAAAAGGTTCCACTCTCATGCCTACATTTTTGTACTGGTTTTGAGTATAGGAAGCACTTTAGTTGAAGGAC

mRNA sequence

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCTTCGCAAGATTTCAGTCGTCCAGTCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATCGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCGTTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCCGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCAACTCGGTCCTTGGCTAGGGGGACAAATTTTAGTGCAATTATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCTGTTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGATGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAATATCGAGCTGGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCGATCGTCGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTTGGTATATCAAAACCTGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGAATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCCCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAATCAATTTTTGATGGAATAAGAGGTCAGCTAGCTCTGTCACTGAAGCCTGCTAGTGTTTTACAGTCATCTTTAAATGATACTTGAAAGATTTCTCTTTCCTTTTAGCTGAATAAGACTGTCAGTTTAGTTCTGTTTAAGTGTGTTCTTTCTTTCCTCTGCCTGATTCGATTCAAGTGAAGCTGGATGATATTGCTTGGTGTTTTAGCTAATATAAGTTTTGTTCTTTCTGGTTCAAAAGGTTCCACTCTCATGCCTACATTTTTGTACTGGTTTTGAGTATAGGAAGCACTTTAGTTGAAGGAC

Coding sequence (CDS)

ATGGACATTGCTTTCAATTCTTCGTCGTTACTTCGATTGAACAAGATTCCCACTGCCCTTGTCTTTCCCACTCATCTTCGCAAGATTTCAGTCGTCCAGTCCAAGCGGTTTGTTCCAATGGCGGCCCTTACAGCCTCCAATGCTATCGGACTGTCGGAAACATTCAGCAAATTGAAGGAACAGGGCAAGGTCGCGTTTATCCCCTACATAACTGCTGGTGATCCTGATCTTTCCACCACGGCCGAGGCATTGAAGGTTCTTTCCAACCATGGATCAGATATAATTGAACTTGGTGTTCCATATTCAGATCCCTTGGCAGATGGCCCTGTTATACAGGCTGCAGCAACTCGGTCCTTGGCTAGGGGGACAAATTTTAGTGCAATTATTTCTATGCTGAAGGAGGTTATTCCTGAACTGTCTTGCCCTGTTGCCCTTTTTTCATACTATAACCCAATTCTTAAGCGTGGCGTCGAGAACTTCATGATGACAATAAGAGATGCTGGTGTACATGGGCTTGTTGTTCCGGATGTTCCTCTGGAAGAGACTGAAATTTTGAGAAAAGAAGCTGTAAAGTACAATATCGAGCTGGTACTCTTAACTACACCAACCACGCCTAAAGATAGGATGAAAGCGATCGTCGAAGCTTCAGAGGGATTTGTGTATCTTGTGAGCTCCGTAGGAGTTACCGGTGCCCGTACATCAGTGAGTGATCGAGTTCAAACTCTCCTTGAGGAAATCAAAGAGGCAACAGAAAAACCAGTGGCAGTAGGTTTTGGTATATCAAAACCTGAGCACGTGAAACAGGTGGCCAACTGGGGGGCTGATGGAATCATAGTTGGTAGTGCTATGGTGAAGCTGTTGGGAGAAGCCCAGACTCCTGAAGAAGGATTGAAGGCACTAGAAAGCTTCACCAAATCCTTAAAATCTGCTCTCTCCTAA

Protein sequence

MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS

Homology

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BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot
Match: O22765 (Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 1.9e-119
Identity = 214/268 (79.85%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 44  TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCP+ALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]

BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot
Match: Q42529 (Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TSA1 PE=1 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 1.8e-117
Identity = 214/283 (75.62%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 30  SVVQSKRFVPMAAL-TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L T+S  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCP++LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

[Close]

BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot
Match: P42390 (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1 SV=2)

HSP 1 Score: 322.8 bits (826), Expect = 4.3e-87
Identity = 157/261 (60.15%), Postives = 202/261 (77.39%), Query Frame = 0


Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+T + L  +GK AFIPYITAGDPDL+TTAEAL++L   G+D+IELGVP SDP  DGP+
Sbjct: 90  VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPI 149

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQA+  R+LA GT   A++ ML+EV PELSCPV L SYY PI+ R     +  +++AGVH
Sbjct: 150 IQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRS----LAEMKEAGVH 209

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GL+VPD+P      L  EA   N+ELVLLTTP  P+DRMK I +ASEGFVYLVS  GVTG
Sbjct: 210 GLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTG 269

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R +V+ RV++L++E+K+ T KPVAVGFGISKPEHVKQ+A WGADG+I+GSAMV+ LGEA
Sbjct: 270 PRANVNPRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIGSAMVRQLGEA 329

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            +P++GL+ LE + + +K+AL
Sbjct: 330 ASPKQGLRRLEEYARGMKNAL 346

[Close]

BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot
Match: B7JUK2 (Tryptophan synthase alpha chain OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=trpA PE=3 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.5e-83
Identity = 153/261 (58.62%), Postives = 196/261 (75.10%), Query Frame = 0


Query: 51  LSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPV 110
           +S+ F  L+++ + A IP+ITAGDPDL TTA+AL++L   G+D+IELGVPYSDPLADGPV
Sbjct: 4   VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPV 63

Query: 111 IQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVH 170
           IQAAATR+L RG     ++ ++KEV PE+  P+ LF+YYNPI  RGVE F+  ++ AGV 
Sbjct: 64  IQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQ 123

Query: 171 GLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTG 230
           GLVVPD+PLEE E L K A +  I + LL  PT+P +R++AI   S+GF+YLVS  GVTG
Sbjct: 124 GLVVPDLPLEEAESLLKPAHEVGIAVTLLVAPTSPIERIEAIARQSQGFIYLVSVTGVTG 183

Query: 231 ARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEA 290
            R+ V+ RV+ LL  ++ AT+KP+ VGFGISKPEH  QV NWGAD +IVGSAMVK L E 
Sbjct: 184 MRSQVTSRVKELLTSLRSATDKPIGVGFGISKPEHALQVKNWGADAVIVGSAMVKRLAEG 243

Query: 291 QTPEEGLKALESFTKSLKSAL 312
            TPEEGLKA+ +F + LK AL
Sbjct: 244 -TPEEGLKAIGAFCQDLKQAL 263

[Close]

BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot
Match: B8HPH2 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=trpA PE=3 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.5e-81
Identity = 149/264 (56.44%), Postives = 191/264 (72.35%), Query Frame = 0


Query: 49  IGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADG 108
           + +S  FS L+++ + A IP+ITAGDP L  TA+AL+VL   G+D+IELGVPYSDPLADG
Sbjct: 2   VSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLADG 61

Query: 109 PVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAG 168
           P IQAAATR+L +GT   A++ M+  V P L  P+ LF+YYNPI  RGVE F+  +  AG
Sbjct: 62  PTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQAG 121

Query: 169 VHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGV 228
           V GLVVPD+PLEE + +  +A    IEL LL  PTTP+ R+ AI E S+GF+YLVS+ GV
Sbjct: 122 VQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTGV 181

Query: 229 TGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLG 288
           TG R+ V  RV  LL E+++ T+KP+ VGFGIS+PEH +QV  WGAD  IVGSA VK L 
Sbjct: 182 TGMRSKVEGRVHELLLELQQVTDKPIGVGFGISQPEHARQVMEWGADAAIVGSAFVKRLA 241

Query: 289 EAQTPEEGLKALESFTKSLKSALS 313
           E  TPE+GL A+  F +SLK+AL+
Sbjct: 242 EG-TPEQGLAAIADFCRSLKTALT 264

[Close]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL
Match: A0A6J1HR08 (Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466992 PE=3 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 9.8e-167
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL
Match: A0A6J1HHZ8 (Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111463818 PE=3 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 2.4e-165
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALT SNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL
Match: A0A6J1CVV7 (Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111015281 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.1e-149
Identity = 278/313 (88.82%), Postives = 297/313 (94.89%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTA-LVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLK 60
           MDIAFNSS LLR NKIPT  L+FP H  KISV Q+KRF PMAA+TAS A+GLSETF+KLK
Sbjct: 1   MDIAFNSSRLLRFNKIPTTPLIFPPHTCKISVFQTKRFAPMAAITASRAVGLSETFNKLK 60

Query: 61  EQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSL 120
           EQGKVAFIPYITAGDPDLSTTAEALKVLS +GSDIIELGVPYSDPLADGPVIQAAATRSL
Sbjct: 61  EQGKVAFIPYITAGDPDLSTTAEALKVLSTYGSDIIELGVPYSDPLADGPVIQAAATRSL 120

Query: 121 ARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPL 180
           ARGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRG+ENFMMTI+DAGV GLV+PDVPL
Sbjct: 121 ARGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIENFMMTIKDAGVQGLVIPDVPL 180

Query: 181 EETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRV 240
           EETEILRKEAVK++IELVLLTTPTTPKDRMKAIVEASEGF+YLVSSVGVTGAR SVS+RV
Sbjct: 181 EETEILRKEAVKHDIELVLLTTPTTPKDRMKAIVEASEGFIYLVSSVGVTGARASVSNRV 240

Query: 241 QTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKA 300
           QTLLEEIKE TEKPVAVGFGISKPEHVKQVA WGADG+IVGSA+VKLLGEA++PEEGLK 
Sbjct: 241 QTLLEEIKEVTEKPVAVGFGISKPEHVKQVAGWGADGVIVGSAIVKLLGEAKSPEEGLKE 300

Query: 301 LESFTKSLKSALS 313
           LE+FTKSLKSALS
Sbjct: 301 LENFTKSLKSALS 313

[Close]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL
Match: A0A5D3E1Z9 (Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00990 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 277/312 (88.78%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MD   NSS L + NKIPT L+FP H  KISV QSKR VPMA+LTAS+A+GLSETFSKLKE
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL
Match: A0A1S3BMG6 (Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103491257 PE=3 SV=1)

HSP 1 Score: 535.4 bits (1378), Expect = 1.6e-148
Identity = 277/312 (88.78%), Postives = 294/312 (94.23%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MD   NSS L + NKIPT L+FP H  KISV QSKR VPMA+LTAS+A+GLSETFSKLKE
Sbjct: 1   MDTVLNSSRLFQFNKIPTTLIFPPHPCKISVFQSKRVVPMASLTASSAVGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLS  GSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSTSGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRG+ NFM+TI+DAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGIGNFMLTIKDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVK+NIELVLLTTPTTP+DRMKAIVEASEGFVYLVSSVGVTGAR SVS++VQ
Sbjct: 181 ETEILRKEAVKHNIELVLLTTPTTPRDRMKAIVEASEGFVYLVSSVGVTGARASVSNKVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKE TEKPVAVGFGISKPEHVKQV++WGADGIIVGSAMVKLLGEAQ+PEEGLKAL
Sbjct: 241 TLLEEIKEVTEKPVAVGFGISKPEHVKQVSSWGADGIIVGSAMVKLLGEAQSPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           E+FTKSLKSALS
Sbjct: 301 ENFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. NCBI nr
Match: XP_022967507.1 (tryptophan synthase alpha chain isoform X1 [Cucurbita maxima])

HSP 1 Score: 595.9 bits (1535), Expect = 2.0e-166
Identity = 312/312 (100.00%), Postives = 312/312 (100.00%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. NCBI nr
Match: KAG6571482.1 (Tryptophan synthase alpha chain, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011245.1 Tryptophan synthase alpha chain [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 592.8 bits (1527), Expect = 1.7e-165
Identity = 310/312 (99.36%), Postives = 311/312 (99.68%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALTASNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. NCBI nr
Match: XP_022963508.1 (tryptophan synthase alpha chain isoform X1 [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 5.0e-165
Identity = 309/312 (99.04%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALT SNAIGLSETFSKLKE
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTVSNAIGLSETFSKLKE 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. NCBI nr
Match: XP_023554753.1 (tryptophan synthase alpha chain-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 588.2 bits (1515), Expect = 4.2e-164
Identity = 308/312 (98.72%), Postives = 310/312 (99.36%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALTASNAIGLSETFSKLK+
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKK 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240
           ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ
Sbjct: 181 ETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLVSSVGVTGARTSVSDRVQ 240

Query: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300
           TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL
Sbjct: 241 TLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAMVKLLGEAQTPEEGLKAL 300

Query: 301 ESFTKSLKSALS 313
           ESFTKSLKSALS
Sbjct: 301 ESFTKSLKSALS 312

[Close]

BLAST of CmaCh19G000550 vs. NCBI nr
Match: XP_023554752.1 (tryptophan synthase alpha chain-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 575.1 bits (1481), Expect = 3.7e-160
Identity = 308/335 (91.94%), Postives = 310/335 (92.54%), Query Frame = 0


Query: 1   MDIAFNSSSLLRLNKIPTALVFPTHLRKISVVQSKRFVPMAALTASNAIGLSETFSKLKE 60
           MDIAFNSSSLLRLNKIPTALVFPTH RKISVVQSKRFVPMAALTASNAIGLSETFSKLK+
Sbjct: 1   MDIAFNSSSLLRLNKIPTALVFPTHPRKISVVQSKRFVPMAALTASNAIGLSETFSKLKK 60

Query: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120
           QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA
Sbjct: 61  QGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSDPLADGPVIQAAATRSLA 120

Query: 121 RGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMTIRDAGVHGLVVPDVPLE 180
           RGTNFSAIISMLKEVIPELSCP+ALFSYYNPILKRGVENFMMTIRDAGV GLVVPDVPLE
Sbjct: 121 RGTNFSAIISMLKEVIPELSCPIALFSYYNPILKRGVENFMMTIRDAGVQGLVVPDVPLE 180

Query: 181 ETEILRKEAVKYNIEL-----------------------VLLTTPTTPKDRMKAIVEASE 240
           ETEILRKEAVKYNIEL                       VLLTTPTTPKDRMKAIVEASE
Sbjct: 181 ETEILRKEAVKYNIELAKSEEQVELLYIIISCYTSSICGVLLTTPTTPKDRMKAIVEASE 240

Query: 241 GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI 300
           GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI
Sbjct: 241 GFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGI 300

Query: 301 IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 313
           IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS
Sbjct: 301 IVGSAMVKLLGEAQTPEEGLKALESFTKSLKSALS 335

[Close]

BLAST of CmaCh19G000550 vs. TAIR 10
Match: AT4G02610.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 430.3 bits (1105), Expect = 1.4e-120
Identity = 214/268 (79.85%), Postives = 246/268 (91.79%), Query Frame = 0


Query: 44  TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLSNHGSDIIELGVPYSD 103
           T S+ +GLSETF++LK QGKVA IPYITAGDPDLSTTA+ALKVL + GSDIIELGVPYSD
Sbjct: 6   TPSSTVGLSETFARLKSQGKVALIPYITAGDPDLSTTAKALKVLDSCGSDIIELGVPYSD 65

Query: 104 PLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSYYNPILKRGVENFMMT 163
           PLADGP IQAAA RSL +GTNF++IISMLKEVIP+LSCP+ALF+YYNPIL+RGVEN+M  
Sbjct: 66  PLADGPAIQAAARRSLLKGTNFNSIISMLKEVIPQLSCPIALFTYYNPILRRGVENYMTV 125

Query: 164 IRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDRMKAIVEASEGFVYLV 223
           I++AGVHGL+VPDVPLEETE LR EA K+ IELVLLTTPTTPK+RM AIVEASEGF+YLV
Sbjct: 126 IKNAGVHGLLVPDVPLEETETLRNEARKHQIELVLLTTPTTPKERMNAIVEASEGFIYLV 185

Query: 224 SSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQVANWGADGIIVGSAM 283
           SSVGVTG R SV+++VQ+LL++IKEAT KPVAVGFGISKPEHVKQVA WGADG+IVGSAM
Sbjct: 186 SSVGVTGTRESVNEKVQSLLQQIKEATSKPVAVGFGISKPEHVKQVAEWGADGVIVGSAM 245

Query: 284 VKLLGEAQTPEEGLKALESFTKSLKSAL 312
           VK+LGE+++PE+GLK LE FTKSLKSAL
Sbjct: 246 VKILGESESPEQGLKELEFFTKSLKSAL 273

[Close]

BLAST of CmaCh19G000550 vs. TAIR 10
Match: AT3G54640.1 (tryptophan synthase alpha chain )

HSP 1 Score: 423.7 bits (1088), Expect = 1.3e-118
Identity = 214/283 (75.62%), Postives = 252/283 (89.05%), Query Frame = 0


Query: 30  SVVQSKRFVPMAAL-TASNAIGLSETFSKLKEQGKVAFIPYITAGDPDLSTTAEALKVLS 89
           S +  KRF PMA+L T+S  +GL++TF++LK+QGKVAFIPYITAGDPDLSTTAEALKVL 
Sbjct: 29  SSLSFKRFTPMASLSTSSPTLGLADTFTQLKKQGKVAFIPYITAGDPDLSTTAEALKVLD 88

Query: 90  NHGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFSAIISMLKEVIPELSCPVALFSY 149
             GSDIIELGVPYSDPLADGPVIQAAATRSL RGTN  +I+ ML +V+P++SCP++LF+Y
Sbjct: 89  ACGSDIIELGVPYSDPLADGPVIQAAATRSLERGTNLDSILEMLDKVVPQISCPISLFTY 148

Query: 150 YNPILKRGVENFMMTIRDAGVHGLVVPDVPLEETEILRKEAVKYNIELVLLTTPTTPKDR 209
           YNPILKRG+  FM +IR  GV GLVVPDVPLEETE+LRKEA+  +IELVLLTTPTTP +R
Sbjct: 149 YNPILKRGLGKFMSSIRAVGVQGLVVPDVPLEETEMLRKEALNNDIELVLLTTPTTPTER 208

Query: 210 MKAIVEASEGFVYLVSSVGVTGARTSVSDRVQTLLEEIKEATEKPVAVGFGISKPEHVKQ 269
           MK IV+ASEGF+YLVSS+GVTGAR+SVS +VQ+LL++IKEAT+KPVAVGFGISKPEHVKQ
Sbjct: 209 MKLIVDASEGFIYLVSSIGVTGARSSVSGKVQSLLKDIKEATDKPVAVGFGISKPEHVKQ 268

Query: 270 VANWGADGIIVGSAMVKLLGEAQTPEEGLKALESFTKSLKSAL 312
           +A WGADG+IVGSAMVKLLG+A++P EGLK LE  TKSLKSAL
Sbjct: 269 IAGWGADGVIVGSAMVKLLGDAKSPTEGLKELEKLTKSLKSAL 311

The following BLAST results are available for this feature:

BLAST of CmaCh19G000550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22765	1.9e-119	79.85	Tryptophan synthase alpha chain OS=Arabidopsis thaliana OX=3702 GN=TRPA1 PE=1 SV...	[more]
Q42529	1.8e-117	75.62	Tryptophan synthase alpha chain, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
P42390	4.3e-87	60.15	Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays OX=4577 GN=BX1 PE=1...	[more]
B7JUK2	6.5e-83	58.62	Tryptophan synthase alpha chain OS=Rippkaea orientalis (strain PCC 8801) OX=4143...	[more]
B8HPH2	3.5e-81	56.44	Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141)...	[more]

BLAST of CmaCh19G000550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HR08	9.8e-167	100.00	Tryptophan synthase OS=Cucurbita maxima OX=3661 GN=LOC111466992 PE=3 SV=1	[more]
A0A6J1HHZ8	2.4e-165	99.04	Tryptophan synthase OS=Cucurbita moschata OX=3662 GN=LOC111463818 PE=3 SV=1	[more]
A0A6J1CVV7	1.1e-149	88.82	Tryptophan synthase OS=Momordica charantia OX=3673 GN=LOC111015281 PE=3 SV=1	[more]
A0A5D3E1Z9	1.6e-148	88.78	Tryptophan synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G...	[more]
A0A1S3BMG6	1.6e-148	88.78	Tryptophan synthase OS=Cucumis melo OX=3656 GN=LOC103491257 PE=3 SV=1	[more]

BLAST of CmaCh19G000550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967507.1	2.0e-166	100.00	tryptophan synthase alpha chain isoform X1 [Cucurbita maxima]	[more]
KAG6571482.1	1.7e-165	99.36	Tryptophan synthase alpha chain, partial [Cucurbita argyrosperma subsp. sororia]...	[more]
XP_022963508.1	5.0e-165	99.04	tryptophan synthase alpha chain isoform X1 [Cucurbita moschata]	[more]
XP_023554753.1	4.2e-164	98.72	tryptophan synthase alpha chain-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023554752.1	3.7e-160	91.94	tryptophan synthase alpha chain-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh19G000550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G02610.1	1.4e-120	79.85	Aldolase-type TIM barrel family protein	[more]
AT3G54640.1	1.3e-118	75.62	tryptophan synthase alpha chain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 232..252
None	No IPR available	PANTHER	PTHR43406:SF6	TRYPTOPHAN SYNTHASE ALPHA CHAIN	coord: 46..311
IPR002028	Tryptophan synthase, alpha chain	TIGRFAM	TIGR00262	TIGR00262	coord: 55..308 e-value: 3.7E-95 score: 315.6
IPR002028	Tryptophan synthase, alpha chain	PFAM	PF00290	Trp_syntA	coord: 55..310 e-value: 1.6E-95 score: 319.0
IPR002028	Tryptophan synthase, alpha chain	PANTHER	PTHR43406	TRYPTOPHAN SYNTHASE, ALPHA CHAIN	coord: 46..311
IPR002028	Tryptophan synthase, alpha chain	HAMAP	MF_00131	Trp_synth_alpha	coord: 61..310 score: 36.962822
IPR002028	Tryptophan synthase, alpha chain	CDD	cd04724	Tryptophan_synthase_alpha	coord: 65..308 e-value: 3.02778E-118 score: 338.297
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 50..312 e-value: 7.5E-112 score: 374.5
IPR018204	Tryptophan synthase, alpha chain, active site	PROSITE	PS00167	TRP_SYNTHASE_ALPHA	coord: 95..108
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 51..292

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000550.1	CmaCh19G000550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000162	tryptophan biosynthetic process
biological_process	GO:0006568	tryptophan metabolic process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004834	tryptophan synthase activity
molecular_function	GO:0003824	catalytic activity