CmaCh19G000300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	non-specific lipid transfer protein GPI-anchored 2-like
Location	Cma_Chr19: 174073 .. 176147 (-)
RNA-Seq Expression	CmaCh19G000300
Synteny	CmaCh19G000300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCATTTCAATGGCGATTTTGAAGGCCTTAGCGTTCATCTCAGTTGCAGCAACTATCTTGAGGAGTTGTTCAGTTGAAGGGCAGATTCGTTCGCCTTGCACGGCCTCAATGATCAACAATTTCACCCCATGTTTCAATGTCATCACTGGAAGTAGCAGCAATGGTTCTTCACAAAAGGAAAGTTGCTGCACCACACTGAGTTCGCTGTCGGGGATAAGCATGGACTGTGTCTGCCTTTTACTTACTGCTAATGTGCCTGTTCCTCTGCCCATCAATGCGGCCCTTGCGCTCATTCTTCCAAGTTCTTGTAACATTACTAACTTGCCTGCACAATGCAAAGGTAACAACTCATCACACCCTTTTCAATGATTTTTAAGTGTTTTAAGGGTTGGAAAAGCCTGACCAAATGGTGTGTAGTCCAATCTCACCGCTAGATGTTGTTCACTTTTCATTTCGAGCTGTTACAAATGGTATCAGAGTCAGACACCGGATGATATGTCAACGAGGAGGCTGAGCCCTGAACGAGGAGGTGTGTCAACAAGGGGTGGATTGTGAGATCCCACATCAGTTGTGGAGGAGAACGAAATATTTTTTATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCATCTTAAAAGTCTTGAGGGAAAACCCGAAGAGGACAATATTTACTAGCGGTGGGCTTGGGATGTTACAAATGATATCATAGCCATACATTAGGCGATGTGTCAGTGAGGACGTTAGGCCCCGAAGGGGGTGGATTGTGAGATCCCACATCGGTTGAAGATGAGAACAAAACATTCTTTACAAGAGTGTGGAAACCTCTCCCTCACAAACGCGTTTAAAAACTTTGAGGGAGGAAAAGCTCAAAGAGGACAATATTTCCTAACGATGGGCTTGAACGGTTAACAATTTCTTAGATTTTATGAGTTTTAACGTTGGTCTTGATCATATCTTGCAGCATCAGCTTCTCCCCTGCCATCACCAGGTATGATAATCTTCTCTAGTTCTCATCAAATTTCTTTTACATCACTAGATCAATGAAAACTCAGAGTAAGAGAGGGTTGAAAATTTGATTCTTCTGTAATTGACAGGACCTGTCTCACTTGGACCAGCTGCACCATCTCCTACTGCAGCTGCTTCTCCTCTAAGCCCACAAGGTAACCTCCATGTGCATGATTATCTAATCTTGTCATCAACATTAAGAATGAGCAGATTCACATCTATTCAATATAAAACGGTTAGGAATTATAATATTATTTCCTCGAACAAAGTACATTATAGAGCCTTTTTAGAGGCCTATGGAGCCCTTGAACAGCCTCCACTTAATCGAGGCTCGACTCCTTTTCTAGAGTACTTGAATAAAGTACACTCTTTGTTTGACACTTCAATCACTTTTAACTACACCTTCGAAGTTCACAACTTCTTTGTTCGATATTTAAGGATCCTATTGACATAGCAAAATTAAGGGCATGACTTTGATACCATATTCGAAATTACGGACCTCACAATGGTATGATATTGTCTTGAGCATAAGCTCTAATGGCTTTATTTTGGGCTTCTCCAAAATGTCTCATACCAATGAAGATATATTTCTTACCTATAAACTCAATACCATTGTGATCCTAAATTAGACTAACTCCCCATGGTGAGGAAAGTTCATTAGTACTTACAATTGATCTTTCATTTGTGTGGGCAGTTTCCAAAGCAGTAGCAGTAGCTCCGGCACCAGAAAGCAGCCAGCCTCAGCCGCAGAAATTGACACCGACGTATTCTCCGGCGGAATCGCAAGCTCCAGAAGCAGCCCACCGTCGGATCCGACCGGTTTTAGCTCCATCCGCATCTACTCCATCTTGTTCCCGCTCACCATCTCTCTTGCTGATTTCCATAGCCGTGATGGTCTTCAAATCCCATTGAACAGTTGTTTTGCTTTCGTTCCTCTACTAATTGAATGTGCTTGATGCACGTTTGTTTCCCTCTTTTCACTCTGCAAAAACGTTCAGAAATCGAAACTTCATTCCGATTTCGATGCCAGTTCTGATATATCTTTAATCAAATGTGATGTTACAACAGTG

mRNA sequence

GTTCATTTCAATGGCGATTTTGAAGGCCTTAGCGTTCATCTCAGTTGCAGCAACTATCTTGAGGAGTTGTTCAGTTGAAGGGCAGATTCGTTCGCCTTGCACGGCCTCAATGATCAACAATTTCACCCCATGTTTCAATGTCATCACTGGAAGTAGCAGCAATGGTTCTTCACAAAAGGAAAGTTGCTGCACCACACTGAGTTCGCTGTCGGGGATAAGCATGGACTGTGTCTGCCTTTTACTTACTGCTAATGTGCCTGTTCCTCTGCCCATCAATGCGGCCCTTGCGCTCATTCTTCCAAGTTCTTGTAACATTACTAACTTGCCTGCACAATGCAAAGCATCAGCTTCTCCCCTGCCATCACCAGGACCTGTCTCACTTGGACCAGCTGCACCATCTCCTACTGCAGCTGCTTCTCCTCTAAGCCCACAAGGTAACCTCCATGTGCATGATTATCTAATCTTTTTCCAAAGCAGTAGCAGTAGCTCCGGCACCAGAAAGCAGCCAGCCTCAGCCGCAGAAATTGACACCGACGTATTCTCCGGCGGAATCGCAAGCTCCAGAAGCAGCCCACCGTCGGATCCGACCGGTTTTAGCTCCATCCGCATCTACTCCATCTTGTTCCCGCTCACCATCTCTCTTGCTGATTTCCATAGCCGTGATGGTCTTCAAATCCCATTGAACAGTTGTTTTGCTTTCGTTCCTCTACTAATTGAATGTGCTTGATGCACGTTTGTTTCCCTCTTTTCACTCTGCAAAAACGTTCAGAAATCGAAACTTCATTCCGATTTCGATGCCAGTTCTGATATATCTTTAATCAAATGTGATGTTACAACAGTG

Coding sequence (CDS)

ATGGCGATTTTGAAGGCCTTAGCGTTCATCTCAGTTGCAGCAACTATCTTGAGGAGTTGTTCAGTTGAAGGGCAGATTCGTTCGCCTTGCACGGCCTCAATGATCAACAATTTCACCCCATGTTTCAATGTCATCACTGGAAGTAGCAGCAATGGTTCTTCACAAAAGGAAAGTTGCTGCACCACACTGAGTTCGCTGTCGGGGATAAGCATGGACTGTGTCTGCCTTTTACTTACTGCTAATGTGCCTGTTCCTCTGCCCATCAATGCGGCCCTTGCGCTCATTCTTCCAAGTTCTTGTAACATTACTAACTTGCCTGCACAATGCAAAGCATCAGCTTCTCCCCTGCCATCACCAGGACCTGTCTCACTTGGACCAGCTGCACCATCTCCTACTGCAGCTGCTTCTCCTCTAAGCCCACAAGGTAACCTCCATGTGCATGATTATCTAATCTTTTTCCAAAGCAGTAGCAGTAGCTCCGGCACCAGAAAGCAGCCAGCCTCAGCCGCAGAAATTGACACCGACGTATTCTCCGGCGGAATCGCAAGCTCCAGAAGCAGCCCACCGTCGGATCCGACCGGTTTTAGCTCCATCCGCATCTACTCCATCTTGTTCCCGCTCACCATCTCTCTTGCTGATTTCCATAGCCGTGATGGTCTTCAAATCCCATTGAACAGTTGTTTTGCTTTCGTTCCTCTACTAATTGAATGTGCTTGA

Protein sequence

MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGPAAPSPTAAASPLSPQGNLHVHDYLIFFQSSSSSSGTRKQPASAAEIDTDVFSGGIASSRSSPPSDPTGFSSIRIYSILFPLTISLADFHSRDGLQIPLNSCFAFVPLLIECA

Homology

[Close]

BLAST of CmaCh19G000300 vs. ExPASy Swiss-Prot
Match: Q1G2Y5 (Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3702 GN=LTPG21 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-21
Identity = 70/195 (35.90%), Postives = 104/195 (53.33%), Query Frame = 0


Query: 21  SVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTA 80
           S+  QI +PC+ SM+++ T C + +TG    GS     CC  L SL+G  MDC+CL++TA
Sbjct: 24  SILAQINTPCSPSMLSSVTGCTSFLTG---GGSFPTSDCCGALKSLTGTGMDCLCLIVTA 83

Query: 81  NVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGPAAPSPTAAASPLSP 140
            VP+ +PIN  LA+ LP +C I  +P QCKASA+PLP+PGP S GP   SPT + +   P
Sbjct: 84  GVPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTT-SPTDSQTS-DP 143

Query: 141 QGNLHVHDYLIFFQSSSSSSGTRKQPASAAEIDTDVFSGGIASSRSSPP-SDPTGFSSIR 200
           +G+               +S T  Q  +  ++      G        PP S P+   S++
Sbjct: 144 EGSASFR---------PPTSPTTSQTPNDKDLSGSGNGGDPMGFAPPPPSSSPSSSHSLK 203

Query: 201 IYSILFPLTISLADF 215
           +  +LF    ++  F
Sbjct: 204 LSYLLFAFAFTIIKF 204

[Close]

BLAST of CmaCh19G000300 vs. ExPASy Swiss-Prot
Match: Q94AX3 (Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3702 GN=LTPG16 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 2.0e-20
Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 25  QIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTANVPV 84
           QI +PCT+SMI+ FTPC N ITGSS    +    CC +L +L+   M C CL+LTANVP+
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 85  PLP-INAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGPAAPSPTAAASPLSPQGN 144
           P   IN  LAL LP +C +  +P QC+A+ +PLP+PG V    A P   +A SP      
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSP------ 141

Query: 145 LHVHDYLIFFQSSSSSSGTRKQPASAAEIDTDVFSGGIASSRSSP---PSDPTGFSSIRI 204
                       +S ++GT    A A +   D  +G    S   P   P  PTG +    
Sbjct: 142 -----------GASKAAGTTPTQAPAPDTPADGPTGPTTKSGIRPVDQPMQPTGLAQSST 195

Query: 205 YSILFPLTISL 212
              L  L ISL
Sbjct: 202 SPFLPLLFISL 195

[Close]

BLAST of CmaCh19G000300 vs. ExPASy Swiss-Prot
Match: Q9LJ85 (Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3702 GN=LTPG20 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-16
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 7   LAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSL 66
           +A I+V A  +R    + Q  S CT SM+   +PC   IT SSSNG+S    CC +L SL
Sbjct: 9   VAMIAVLALPIRG---QQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSL 68

Query: 67  SGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGP 126
           +   M C+CL++T  VP  +PIN   A+ LP +CN+  +P QC+A+ +P  +PGP +   
Sbjct: 69  TTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGPAATFG 128

Query: 127 AAPSPTAAASPLSPQ 142
            + SP     P+ P+
Sbjct: 129 PSMSPGPETDPIVPE 140

[Close]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL
Match: A0A6J1HQN3 (vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC111466920 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 9.7e-66
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG
Sbjct: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           PVSLGPAAPSPTAAASPLSPQ
Sbjct: 121 PVSLGPAAPSPTAAASPLSPQ 141

[Close]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL
Match: A0A6J1HFC2 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX=3662 GN=LOC111463793 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 4.8e-65
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLLTANVPVPLPINAALAL+LPSSCNITNLPAQCKAS SPLPSPG
Sbjct: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALVLPSSCNITNLPAQCKASGSPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           P+SLGPAAPSPTAAASPLSPQ
Sbjct: 121 PISLGPAAPSPTAAASPLSPQ 141

[Close]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL
Match: A0A6J1CXY7 (non-specific lipid transfer protein GPI-anchored 2-like OS=Momordica charantia OX=3673 GN=LOC111015233 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 3.7e-57
Identity = 126/141 (89.36%), Postives = 130/141 (92.20%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           M   KALAFISVAATIL S SV+GQIRSPCTASMINNFTPCFNVITGSS+NGSSQKESCC
Sbjct: 2   METFKALAFISVAATILGSSSVKGQIRSPCTASMINNFTPCFNVITGSSNNGSSQKESCC 61

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTL SLSGISMDC CLLLTANVPVPLPINAALALILP+SCNITNLPAQCKAS SPLPSPG
Sbjct: 62  TTLRSLSGISMDCACLLLTANVPVPLPINAALALILPTSCNITNLPAQCKASGSPLPSPG 121

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           P+SLGP A  PTAAASPLSPQ
Sbjct: 122 PISLGPTALPPTAAASPLSPQ 142

[Close]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL
Match: A0A5D3CNC4 (Non-specific lipid transfer protein GPI-anchored 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00420 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.0e-52
Identity = 117/142 (82.39%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           M ILKALA+I+VAATIL S SVEGQ   PCT SM+NNFTPCFN ITGSSSNGSSQ+ESCC
Sbjct: 3   MEILKALAYITVAATILGSFSVEGQTPYPCTTSMMNNFTPCFNAITGSSSNGSSQQESCC 62

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           T+L SLSG SMDC CLLLTANVPVPLPINAAL LILPSSCNI+NLPAQCKAS SPLPSPG
Sbjct: 63  TSLRSLSGTSMDCACLLLTANVPVPLPINAALGLILPSSCNISNLPAQCKASGSPLPSPG 122

Query: 121 PVSLGPAAPSPTAAASP-LSPQ 142
           P+SLGP AP+PTAA SP LSP+
Sbjct: 123 PISLGPTAPTPTAATSPELSPR 144

[Close]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL
Match: A0A1S3BM23 (non-specific lipid transfer protein GPI-anchored 2-like OS=Cucumis melo OX=3656 GN=LOC103491328 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 8.0e-52
Identity = 117/142 (82.39%), Postives = 126/142 (88.73%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           M ILKALA+I+VAATIL S SVEGQ   PCT SM+NNFTPCFN ITGSSSNGSSQ+ESCC
Sbjct: 3   MEILKALAYITVAATILGSFSVEGQTPYPCTTSMMNNFTPCFNAITGSSSNGSSQQESCC 62

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           T+L SLSG SMDC CLLLTANVPVPLPINAAL LILPSSCNI+NLPAQCKAS SPLPSPG
Sbjct: 63  TSLRSLSGTSMDCACLLLTANVPVPLPINAALGLILPSSCNISNLPAQCKASGSPLPSPG 122

Query: 121 PVSLGPAAPSPTAAASP-LSPQ 142
           P+SLGP AP+PTAA SP LSP+
Sbjct: 123 PISLGPTAPTPTAATSPELSPR 144

[Close]

BLAST of CmaCh19G000300 vs. NCBI nr
Match: KAG6571460.1 (hypothetical protein SDJN03_28188, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 273.9 bits (699), Expect = 1.3e-69
Identity = 146/151 (96.69%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLL ANVPVPLPINAALAL+LPSSCNITNLPAQCKAS SPLPSPG
Sbjct: 61  TTLSSLSGISMDCVCLLLAANVPVPLPINAALALVLPSSCNITNLPAQCKASGSPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQGNLHVHDYLI 152
           P+SLGPAAPSPTAAASPLSPQGNL VHDYLI
Sbjct: 121 PISLGPAAPSPTAAASPLSPQGNLLVHDYLI 151

[Close]

BLAST of CmaCh19G000300 vs. NCBI nr
Match: XP_022967372.1 (vegetative cell wall protein gp1-like [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 2.0e-65
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG
Sbjct: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           PVSLGPAAPSPTAAASPLSPQ
Sbjct: 121 PVSLGPAAPSPTAAASPLSPQ 141

[Close]

BLAST of CmaCh19G000300 vs. NCBI nr
Match: XP_022963467.1 (non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 9.9e-65
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLLTANVPVPLPINAALAL+LPSSCNITNLPAQCKAS SPLPSPG
Sbjct: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALVLPSSCNITNLPAQCKASGSPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           P+SLGPAAPSPTAAASPLSPQ
Sbjct: 121 PISLGPAAPSPTAAASPLSPQ 141

[Close]

BLAST of CmaCh19G000300 vs. NCBI nr
Match: XP_023553681.1 (vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-64
Identity = 137/141 (97.16%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSG+SMDCVCLLLTANVPVPLPINAALAL+LPSSCNITNLPAQCKAS SPLPSPG
Sbjct: 61  TTLSSLSGVSMDCVCLLLTANVPVPLPINAALALVLPSSCNITNLPAQCKASGSPLPSPG 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           PVSLGP APSPTAAASPLSPQ
Sbjct: 121 PVSLGPTAPSPTAAASPLSPQ 141

[Close]

BLAST of CmaCh19G000300 vs. NCBI nr
Match: KAG7011225.1 (hypothetical protein SDJN02_26128, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 235.0 bits (598), Expect = 6.9e-58
Identity = 129/141 (91.49%), Postives = 131/141 (92.91%), Query Frame = 0


Query: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60
           MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC
Sbjct: 1   MAILKALAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCC 60

Query: 61  TTLSSLSGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPG 120
           TTLSSLSGISMDCVCLLL ANVPVPLPINAALAL+LPSSCNITNLPAQCK         G
Sbjct: 61  TTLSSLSGISMDCVCLLLAANVPVPLPINAALALVLPSSCNITNLPAQCK---------G 120

Query: 121 PVSLGPAAPSPTAAASPLSPQ 142
           P+SLGPAAPSPTAAASPLSPQ
Sbjct: 121 PISLGPAAPSPTAAASPLSPQ 132

[Close]

BLAST of CmaCh19G000300 vs. TAIR 10
Match: AT1G05450.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 105.1 bits (261), Expect = 7.7e-23
Identity = 70/195 (35.90%), Postives = 104/195 (53.33%), Query Frame = 0


Query: 21  SVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTA 80
           S+  QI +PC+ SM+++ T C + +TG    GS     CC  L SL+G  MDC+CL++TA
Sbjct: 24  SILAQINTPCSPSMLSSVTGCTSFLTG---GGSFPTSDCCGALKSLTGTGMDCLCLIVTA 83

Query: 81  NVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGPAAPSPTAAASPLSP 140
            VP+ +PIN  LA+ LP +C I  +P QCKASA+PLP+PGP S GP   SPT + +   P
Sbjct: 84  GVPISIPINRTLAISLPRACGIPGVPVQCKASAAPLPTPGPASFGPTT-SPTDSQTS-DP 143

Query: 141 QGNLHVHDYLIFFQSSSSSSGTRKQPASAAEIDTDVFSGGIASSRSSPP-SDPTGFSSIR 200
           +G+               +S T  Q  +  ++      G        PP S P+   S++
Sbjct: 144 EGSASFR---------PPTSPTTSQTPNDKDLSGSGNGGDPMGFAPPPPSSSPSSSHSLK 203

Query: 201 IYSILFPLTISLADF 215
           +  +LF    ++  F
Sbjct: 204 LSYLLFAFAFTIIKF 204

[Close]

BLAST of CmaCh19G000300 vs. TAIR 10
Match: AT2G48140.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.4e-21
Identity = 74/191 (38.74%), Postives = 97/191 (50.79%), Query Frame = 0


Query: 25  QIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTANVPV 84
           QI +PCT+SMI+ FTPC N ITGSS    +    CC +L +L+   M C CL+LTANVP+
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 85  PLP-INAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGPAAPSPTAAASPLSPQGN 144
           P   IN  LAL LP +C +  +P QC+A+ +PLP+PG V    A P   +A SP      
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGQVPFLIAPPPQVSAFSP------ 141

Query: 145 LHVHDYLIFFQSSSSSSGTRKQPASAAEIDTDVFSGGIASSRSSP---PSDPTGFSSIRI 204
                       +S ++GT    A A +   D  +G    S   P   P  PTG +    
Sbjct: 142 -----------GASKAAGTTPTQAPAPDTPADGPTGPTTKSGIRPVDQPMQPTGLAQSST 195

Query: 205 YSILFPLTISL 212
              L  L ISL
Sbjct: 202 SPFLPLLFISL 195

[Close]

BLAST of CmaCh19G000300 vs. TAIR 10
Match: AT2G48140.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-20
Identity = 50/99 (50.51%), Postives = 67/99 (67.68%), Query Frame = 0


Query: 25  QIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSLSGISMDCVCLLLTANVPV 84
           QI +PCT+SMI+ FTPC N ITGSS    +    CC +L +L+   M C CL+LTANVP+
Sbjct: 22  QISTPCTSSMISTFTPCLNFITGSSGGSVTPTAGCCDSLKTLTNTGMGCACLILTANVPL 81

Query: 85  PLP-INAALALILPSSCNITNLPAQCKASASPLPSPGPV 123
           P   IN  LAL LP +C +  +P QC+A+ +PLP+PG +
Sbjct: 82  PTGFINRTLALALPRACKMGGVPIQCQAAGTPLPAPGSI 120

[Close]

BLAST of CmaCh19G000300 vs. TAIR 10
Match: AT3G22620.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 88.6 bits (218), Expect = 7.4e-18
Identity = 53/135 (39.26%), Postives = 78/135 (57.78%), Query Frame = 0


Query: 7   LAFISVAATILRSCSVEGQIRSPCTASMINNFTPCFNVITGSSSNGSSQKESCCTTLSSL 66
           +A I+V A  +R    + Q  S CT SM+   +PC   IT SSSNG+S    CC +L SL
Sbjct: 9   VAMIAVLALPIRG---QQQPLSQCTPSMMTTVSPCMGFITNSSSNGTSPSSDCCNSLRSL 68

Query: 67  SGISMDCVCLLLTANVPVPLPINAALALILPSSCNITNLPAQCKASASPLPSPGPVSLGP 126
           +   M C+CL++T  VP  +PIN   A+ LP +CN+  +P QC+A+ +P  +PGP +   
Sbjct: 69  TTGGMGCLCLIVTGTVPFNIPINRTTAVSLPRACNMPRVPLQCQANIAPAAAPGPAATFG 128

Query: 127 AAPSPTAAASPLSPQ 142
            + SP     P+ P+
Sbjct: 129 PSMSPGPETDPIVPE 140

The following BLAST results are available for this feature:

BLAST of CmaCh19G000300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1G2Y5	1.1e-21	35.90	Non-specific lipid transfer protein GPI-anchored 21 OS=Arabidopsis thaliana OX=3...	[more]
Q94AX3	2.0e-20	38.74	Non-specific lipid transfer protein GPI-anchored 16 OS=Arabidopsis thaliana OX=3...	[more]
Q9LJ85	1.0e-16	39.26	Non-specific lipid transfer protein GPI-anchored 20 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of CmaCh19G000300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HQN3	9.7e-66	100.00	vegetative cell wall protein gp1-like OS=Cucurbita maxima OX=3661 GN=LOC11146692...	[more]
A0A6J1HFC2	4.8e-65	97.87	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucurbita moschata OX...	[more]
A0A6J1CXY7	3.7e-57	89.36	non-specific lipid transfer protein GPI-anchored 2-like OS=Momordica charantia O...	[more]
A0A5D3CNC4	8.0e-52	82.39	Non-specific lipid transfer protein GPI-anchored 2-like OS=Cucumis melo var. mak...	[more]
A0A1S3BM23	8.0e-52	82.39	non-specific lipid transfer protein GPI-anchored 2-like OS=Cucumis melo OX=3656 ...	[more]

BLAST of CmaCh19G000300 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571460.1	1.3e-69	96.69	hypothetical protein SDJN03_28188, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022967372.1	2.0e-65	100.00	vegetative cell wall protein gp1-like [Cucurbita maxima]	[more]
XP_022963467.1	9.9e-65	97.87	non-specific lipid transfer protein GPI-anchored 2-like [Cucurbita moschata]	[more]
XP_023553681.1	2.9e-64	97.16	vegetative cell wall protein gp1-like [Cucurbita pepo subsp. pepo]	[more]
KAG7011225.1	6.9e-58	91.49	hypothetical protein SDJN02_26128, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of CmaCh19G000300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05450.2	7.7e-23	35.90	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48140.1	1.4e-21	38.74	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G48140.2	2.1e-20	50.51	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G22620.1	7.4e-18	39.26	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..109 e-value: 0.0011 score: 28.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 23..109 e-value: 9.2E-10 score: 38.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 28..109 e-value: 9.6E-10 score: 40.2
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..109
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 8..189
None	No IPR available	PANTHER	PTHR33044:SF142	CLASSICAL ARABINOGALACTAN PROTEIN 9-LIKE	coord: 8..189
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 38..102 e-value: 7.93738E-8 score: 46.2659

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000300.1	CmaCh19G000300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane