CmaCh19G000190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh19G000190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr19: 116705 .. 117145 (+)
RNA-Seq Expression	CmaCh19G000190
Synteny	CmaCh19G000190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGAGTCTTCACAACCTCAGAATCCCGACGAGTACTCTGCCTCTTCGACAGTTATCACCTTCGGACGCCCAATTCGTGGGCCAATTCGAGCCGGTCAATCCGAAAATCCCTCGGCAGGTCCGTACTTGCTTGCATTTAGGGATCCCCAAGCGTGGGAATCTGCATACGAAATATGCGAGTCGAAGATTATTGAACAATGCGAGGCCGGCGCGAGGATTGGTTGTTCAATACTTGCTTCCGACAAATGCAAGCCGCGGTGGTGGGGATTTTTGATGCAATCGAAGAAGGGGTTGGATTTGAAGGCGAGGGAGATGTGCGAAGAGCGAGAAATGGAGGCTTGTTTGGCAGCTGCAAAGGAGAAGTGTGCTGGTTTCGCGAAGGAGAAGTGTTGTAAGCCGTTCATGGATGCTAGAATTGGAATTTTTCAAAAGGTCTGA

mRNA sequence

ATGATGGAGTCTTCACAACCTCAGAATCCCGACGAGTACTCTGCCTCTTCGACAGTTATCACCTTCGGACGCCCAATTCGTGGGCCAATTCGAGCCGGTCAATCCGAAAATCCCTCGGCAGGTCCGTACTTGCTTGCATTTAGGGATCCCCAAGCGTGGGAATCTGCATACGAAATATGCGAGTCGAAGATTATTGAACAATGCGAGGCCGGCGCGAGGATTGGTTGTTCAATACTTGCTTCCGACAAATGCAAGCCGCGGTGGTGGGGATTTTTGATGCAATCGAAGAAGGGGTTGGATTTGAAGGCGAGGGAGATGTGCGAAGAGCGAGAAATGGAGGCTTGTTTGGCAGCTGCAAAGGAGAAGTGTGCTGGTTTCGCGAAGGAGAAGTGTTGTAAGCCGTTCATGGATGCTAGAATTGGAATTTTTCAAAAGGTCTGA

Coding sequence (CDS)

ATGATGGAGTCTTCACAACCTCAGAATCCCGACGAGTACTCTGCCTCTTCGACAGTTATCACCTTCGGACGCCCAATTCGTGGGCCAATTCGAGCCGGTCAATCCGAAAATCCCTCGGCAGGTCCGTACTTGCTTGCATTTAGGGATCCCCAAGCGTGGGAATCTGCATACGAAATATGCGAGTCGAAGATTATTGAACAATGCGAGGCCGGCGCGAGGATTGGTTGTTCAATACTTGCTTCCGACAAATGCAAGCCGCGGTGGTGGGGATTTTTGATGCAATCGAAGAAGGGGTTGGATTTGAAGGCGAGGGAGATGTGCGAAGAGCGAGAAATGGAGGCTTGTTTGGCAGCTGCAAAGGAGAAGTGTGCTGGTTTCGCGAAGGAGAAGTGTTGTAAGCCGTTCATGGATGCTAGAATTGGAATTTTTCAAAAGGTCTGA

Protein sequence

MMESSQPQNPDEYSASSTVITFGRPIRGPIRAGQSENPSAGPYLLAFRDPQAWESAYEICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAAAKEKCAGFAKEKCCKPFMDARIGIFQKV

Homology

[Close]

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL
Match: A0A6J1HJ78 (uncharacterized protein LOC111464060 OS=Cucurbita moschata OX=3662 GN=LOC111464060 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.1e-72
Identity = 138/148 (93.24%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 2   MESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAYE 61
           MESSQPQNPDEYSASSTVITFGRPI   RGPIRAGQSENPSAGP +LAFRDPQAWESAY+
Sbjct: 8   MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYK 67

Query: 62  ICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 121
           ICE KIIEQCEAGARIGCSI+ASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA
Sbjct: 68  ICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 127

Query: 122 AKEKCAGFAKEKCCKPFMDARIGIFQKV 147
           AKEKC GFAKEKC KPFMDARIGIFQKV
Sbjct: 128 AKEKCVGFAKEKCSKPFMDARIGIFQKV 155

[Close]

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL
Match: A0A6J1CY74 (uncharacterized protein LOC111015296 OS=Momordica charantia OX=3673 GN=LOC111015296 PE=4 SV=1)

HSP 1 Score: 251.1 bits (640), Expect = 2.8e-63
Identity = 122/143 (85.31%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRP---IRGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           +ME SQPQNPD+YSASST+ITF RP   IRGPIRAG SENPSAGPYLLAFRDPQAWESAY
Sbjct: 8   IMEPSQPQNPDDYSASSTIITFQRPIPLIRGPIRAGPSENPSAGPYLLAFRDPQAWESAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI AS+KCKP WWGFL+ S KGLDLK RE CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITASNKCKPPWWGFLIHSSKGLDLKEREHCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
           AAKEKC GFAKEKC KPFM+ARI
Sbjct: 128 AAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL
Match: A0A6J1JZ34 (uncharacterized protein LOC111491021 OS=Cucurbita maxima OX=3661 GN=LOC111491021 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           MME SQPQNPD+YSA++T+ITF RPI   RGPIRAG+SENPSAGPYLLAFRDPQAWESAY
Sbjct: 8   MMEPSQPQNPDDYSAATTIITFQRPIPLLRGPIRAGRSENPSAGPYLLAFRDPQAWESAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI A +KCK  WW FL+QSKKGLDLK RE CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITAINKCKRPWWSFLIQSKKGLDLKDREQCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
            AKEKC GFAKEKC KPFM+ARI
Sbjct: 128 GAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL
Match: A0A6J1ES78 (uncharacterized protein LOC111437258 OS=Cucurbita moschata OX=3662 GN=LOC111437258 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.4e-61
Identity = 117/143 (81.82%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           MME SQPQNPD+YSA++T+ITF RPI   RGPIR+G+SENPSAGPYLLAFRDPQAW+SAY
Sbjct: 8   MMEPSQPQNPDDYSAATTIITFQRPIPLLRGPIRSGRSENPSAGPYLLAFRDPQAWKSAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI A +KCK  WW FL+QSKKGLDLK RE+CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITAINKCKRPWWSFLIQSKKGLDLKDRELCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
            AKEKC GFAKEKC KPFM+ARI
Sbjct: 128 GAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL
Match: A0A5A7UV37 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G002790 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.9e-59
Identity = 116/142 (81.69%), Postives = 124/142 (87.32%), Query Frame = 0


Query: 2   MESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAYE 61
           ME SQP NP EYSASST+ITF RPI   RGP+RA QSENPSAGPYLLAF+D QAWESA++
Sbjct: 9   MEPSQPHNPHEYSASSTIITFQRPIPLLRGPVRASQSENPSAGPYLLAFKDRQAWESAFK 68

Query: 62  ICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 121
            CESKIIEQCEAGARIGCSI AS+KCKP WWGFL +SKKGLDLK RE CEE EMEACLAA
Sbjct: 69  ACESKIIEQCEAGARIGCSITASNKCKPPWWGFLFRSKKGLDLKEREQCEELEMEACLAA 128

Query: 122 AKEKCAGFAKEKCCKPFMDARI 141
           AKEKC GFAKEKC KPFM+ARI
Sbjct: 129 AKEKCVGFAKEKCYKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. NCBI nr
Match: XP_022963883.1 (uncharacterized protein LOC111464060 [Cucurbita moschata])

HSP 1 Score: 282.3 bits (721), Expect = 2.3e-72
Identity = 138/148 (93.24%), Postives = 141/148 (95.27%), Query Frame = 0


Query: 2   MESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAYE 61
           MESSQPQNPDEYSASSTVITFGRPI   RGPIRAGQSENPSAGP +LAFRDPQAWESAY+
Sbjct: 8   MESSQPQNPDEYSASSTVITFGRPIPLLRGPIRAGQSENPSAGPSMLAFRDPQAWESAYK 67

Query: 62  ICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 121
           ICE KIIEQCEAGARIGCSI+ASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA
Sbjct: 68  ICELKIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 127

Query: 122 AKEKCAGFAKEKCCKPFMDARIGIFQKV 147
           AKEKC GFAKEKC KPFMDARIGIFQKV
Sbjct: 128 AKEKCVGFAKEKCSKPFMDARIGIFQKV 155

[Close]

BLAST of CmaCh19G000190 vs. NCBI nr
Match: KAG7011217.1 (hypothetical protein SDJN02_26120, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 276.6 bits (706), Expect = 1.3e-70
Identity = 135/148 (91.22%), Postives = 138/148 (93.24%), Query Frame = 0


Query: 2   MESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAYE 61
           MESSQPQNPDEYS SSTVITFGRPI   RGPIRAGQSENPSAGPY+L FRDPQAWESAY+
Sbjct: 1   MESSQPQNPDEYSVSSTVITFGRPIPLLRGPIRAGQSENPSAGPYMLGFRDPQAWESAYK 60

Query: 62  ICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 121
           ICE  IIEQCEAGARIGCSI+ASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA
Sbjct: 61  ICELNIIEQCEAGARIGCSIIASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAA 120

Query: 122 AKEKCAGFAKEKCCKPFMDARIGIFQKV 147
           AKEK  GFAKEKC KPFMDARIGIFQKV
Sbjct: 121 AKEKYVGFAKEKCSKPFMDARIGIFQKV 148

[Close]

BLAST of CmaCh19G000190 vs. NCBI nr
Match: XP_022145972.1 (uncharacterized protein LOC111015296 [Momordica charantia] >XP_022145973.1 uncharacterized protein LOC111015296 [Momordica charantia] >XP_022145974.1 uncharacterized protein LOC111015296 [Momordica charantia] >XP_022145975.1 uncharacterized protein LOC111015296 [Momordica charantia] >XP_022145976.1 uncharacterized protein LOC111015296 [Momordica charantia])

HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63
Identity = 122/143 (85.31%), Postives = 129/143 (90.21%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRP---IRGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           +ME SQPQNPD+YSASST+ITF RP   IRGPIRAG SENPSAGPYLLAFRDPQAWESAY
Sbjct: 8   IMEPSQPQNPDDYSASSTIITFQRPIPLIRGPIRAGPSENPSAGPYLLAFRDPQAWESAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI AS+KCKP WWGFL+ S KGLDLK RE CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITASNKCKPPWWGFLIHSSKGLDLKEREHCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
           AAKEKC GFAKEKC KPFM+ARI
Sbjct: 128 AAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. NCBI nr
Match: XP_022995502.1 (uncharacterized protein LOC111491021 [Cucurbita maxima] >XP_022995503.1 uncharacterized protein LOC111491021 [Cucurbita maxima] >XP_022995504.1 uncharacterized protein LOC111491021 [Cucurbita maxima] >XP_022995505.1 uncharacterized protein LOC111491021 [Cucurbita maxima] >XP_022995506.1 uncharacterized protein LOC111491021 [Cucurbita maxima])

HSP 1 Score: 245.7 bits (626), Expect = 2.4e-61
Identity = 119/143 (83.22%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           MME SQPQNPD+YSA++T+ITF RPI   RGPIRAG+SENPSAGPYLLAFRDPQAWESAY
Sbjct: 8   MMEPSQPQNPDDYSAATTIITFQRPIPLLRGPIRAGRSENPSAGPYLLAFRDPQAWESAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI A +KCK  WW FL+QSKKGLDLK RE CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITAINKCKRPWWSFLIQSKKGLDLKDREQCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
            AKEKC GFAKEKC KPFM+ARI
Sbjct: 128 GAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. NCBI nr
Match: XP_023534255.1 (uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534256.1 uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534258.1 uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534259.1 uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534260.1 uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534261.1 uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 244.2 bits (622), Expect = 7.0e-61
Identity = 118/143 (82.52%), Postives = 128/143 (89.51%), Query Frame = 0


Query: 1   MMESSQPQNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAY 60
           MME SQPQNPD+YSA++T+ITF RPI   RGPIRAG+SENPSAGPYLLAFRDPQAW+SAY
Sbjct: 8   MMEPSQPQNPDDYSAATTIITFQRPIPLLRGPIRAGRSENPSAGPYLLAFRDPQAWKSAY 67

Query: 61  EICESKIIEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLA 120
           +ICESKIIEQCEAGARIGCSI A +KCK  WW FL+QSKKGLDLK RE CEEREMEACLA
Sbjct: 68  KICESKIIEQCEAGARIGCSITAINKCKRPWWSFLIQSKKGLDLKDREQCEEREMEACLA 127

Query: 121 AAKEKCAGFAKEKCCKPFMDARI 141
            AKEKC GFAKEKC KPFM+ARI
Sbjct: 128 GAKEKCVGFAKEKCSKPFMEARI 150

[Close]

BLAST of CmaCh19G000190 vs. TAIR 10
Match: AT3G63390.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 1.9e-32
Identity = 67/136 (49.26%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 8   QNPDEYSASSTVITFGRPI---RGPIRAGQSENPSAGPYLLAFRDPQAWESAYEICESKI 67
           ++ D++SA++T + F RPI   RGP+       PS G Y+LAFR   +W +A++ CE+ I
Sbjct: 3   EDDDDFSAAATTVVFDRPIPLLRGPV-------PSGGSYVLAFRSLDSWSAAFKRCETLI 62

Query: 68  IEQCEAGARIGCSILASDKCKPRWWGFLMQSKKGLDLKAREMCEEREMEACLAAAKEKCA 127
            +QCE GA+IGC++ AS+ CKP WW        G D++ RE CEERE E C+AAAK KCA
Sbjct: 63  KDQCEEGAKIGCAVSASNNCKPPWW-----RGSGGDMREREKCEEREFEGCVAAAKGKCA 122

Query: 128 GFAKEKCCKPFMDARI 141
            FAK+KC   F+DARI
Sbjct: 123 AFAKDKCSGAFLDARI 126

The following BLAST results are available for this feature:

BLAST of CmaCh19G000190 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh19G000190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HJ78	1.1e-72	93.24	uncharacterized protein LOC111464060 OS=Cucurbita moschata OX=3662 GN=LOC1114640...	[more]
A0A6J1CY74	2.8e-63	85.31	uncharacterized protein LOC111015296 OS=Momordica charantia OX=3673 GN=LOC111015...	[more]
A0A6J1JZ34	1.2e-61	83.22	uncharacterized protein LOC111491021 OS=Cucurbita maxima OX=3661 GN=LOC111491021...	[more]
A0A6J1ES78	4.4e-61	81.82	uncharacterized protein LOC111437258 OS=Cucurbita moschata OX=3662 GN=LOC1114372...	[more]
A0A5A7UV37	1.9e-59	81.69	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmaCh19G000190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022963883.1	2.3e-72	93.24	uncharacterized protein LOC111464060 [Cucurbita moschata]	[more]
KAG7011217.1	1.3e-70	91.22	hypothetical protein SDJN02_26120, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022145972.1	5.7e-63	85.31	uncharacterized protein LOC111015296 [Momordica charantia] >XP_022145973.1 uncha...	[more]
XP_022995502.1	2.4e-61	83.22	uncharacterized protein LOC111491021 [Cucurbita maxima] >XP_022995503.1 uncharac...	[more]
XP_023534255.1	7.0e-61	82.52	uncharacterized protein LOC111795871 [Cucurbita pepo subsp. pepo] >XP_023534256....	[more]

BLAST of CmaCh19G000190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63390.1	1.9e-32	49.26	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36773	EXPRESSED PROTEIN	coord: 3..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh19G000190.1	CmaCh19G000190.1	mRNA