CmaCh18G013180 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G013180
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thylakoid lumenal 17.4 kDa protein, chloroplastic-like
Location	Cma_Chr18: 10114008 .. 10116176 (+)
RNA-Seq Expression	CmaCh18G013180
Synteny	CmaCh18G013180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGCTTTGCTTTTGTTTTCCTGGGGAACTCAATAATGTAATGTCCAAGTTTTTTAGCCATAATCCTACGTGTACTGCCACGCCATCAATATCAGATCCCCAACATCTCAGAACGGATAAGTGAAGCGTAGGGAGCGAGGGAGAGGGAATTCATTTTTCCAAATGGCCACTTTTTCAATTCCACTCTCTCAGAATGGTTTCCCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTGTATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGGTTAGTCTTTCTTCCTCCTCTTCTTGGGTTTTGAACTGCCCCTGCTTTTCCTTTCTTTGTTTTTTTAATTCACTCCAGTTTTATGCATTGATTTACTTGAACGATTGCTCCTCATCGTACCCCTTTTTGTGGGCAAATTGCATTAGAATCTGGGGAGCAATGTTTTCTTTTTCCCGGTCTCTGCCCTTTGCTGCATCTTATGTTGTTAGGATCAGGATGCTGGTTCTGGGTAAATGCATTGAGTAATCCCTAAATTGGTAAAAATTCCTGTTTTTGCGTACCCTTTGATGTGCTTGGGCGAATGCAATTTGAACTCAACCCCACTTGTTGGGAAAGCAACATAATCATTATGACTTGTGTTTAATGGAGCCTTATCTGCAATGCCATTTTCTTAACTGATGAAACAAGTGTTCGGTGTGGTGAAATTGCAGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCATCTTGCAAGCACATTGGTACTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGTTTGCAGCTACTCAGGTCAATAGCCTATCGCATTTCTCCATCCACATGCCTTGAGGCAATTAACAATTAATACCCACATCTGTGACATTCTTCACTTTCGATCTTGTATTAATGTTGTGAGATCTCACGTCGGTTGGGGAGGGGAGCGAAACATTCTTTATACGAGTGTAGAAACCTCTCGTTAGCAGGCTTATTTTAAAACCTTGAGGGTAACCATGGAAGGAAAAGCCCTAAGAGGACAATATCTGTTAGCGGTGGACTTAGACTGTTACAAATGGTATCGATTGGAGAGGAAAATGAAACATTCTTTATAAGAGTGTAGAAACATCTATCTCTCTAGCCGATGCGGAAGGGAAAGTTGAAAGAGGACAATATCGGGTAGTGGTGGGCAACAAAATTCTTCCTTTTATAGTCATGATCAACAAAATTCGTTCACTTTGTGTGGCAAGTGTGAAACAACTCATTATGTTTAACCTCGAGAAATAAACCTGTTGAACTGATAATATAATATGTGGGACTTGCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTAAAATTCTCTCTATCTTACCCCAACTCCAATAGCCAGGCGGATTGTCAAGATAGGAGAAAGACTTTCATTTTAATTGATCTAAAGCTCGTCCTTGGATCTCCCAACTCTAAAATATGTAGGGCATAGCCACATACTCATCACATTTGCTAACGAATATCCTGAAAAACACTCATAATATGGATTCAAACATCATGACAACATTGCGTATTGCAGGTGTCGATTTCTCGAATGCGGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTAGTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCAATATAGTCTGTGTATGTATTGTATTGTATAAACAACTTATATGATTTTGGTAAGTAATACATATTCAAAGAGAGAACTCCCTCTAACTTCTGTTGAAGAACAATGTGGTGTCACTGTCAAGTTCATGTTTTCC

mRNA sequence

GAGCTTTGCTTTTGTTTTCCTGGGGAACTCAATAATGTAATGTCCAAGTTTTTTAGCCATAATCCTACGTGTACTGCCACGCCATCAATATCAGATCCCCAACATCTCAGAACGGATAAGTGAAGCGTAGGGAGCGAGGGAGAGGGAATTCATTTTTCCAAATGGCCACTTTTTCAATTCCACTCTCTCAGAATGGTTTCCCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTGTATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCATCTTGCAAGCACATTGGTACTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGTTTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAATGCGGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTAGTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGATTTCAATATAGTCTGTGTATGTATTGTATTGTATAAACAACTTATATGATTTTGGTAAGTAATACATATTCAAAGAGAGAACTCCCTCTAACTTCTGTTGAAGAACAATGTGGTGTCACTGTCAAGTTCATGTTTTCC

Coding sequence (CDS)

ATGGCCACTTTTTCAATTCCACTCTCTCAGAATGGTTTCCCTCGCAGCTTCTACTCTGCAAAACGCCCACAGCTTGTATCCCCACTTGCCCCTTCCCTCGCCCGTATCACTTGCTGTGCTACTGTGGATGGGGCTGAACCAAAAGAGAGCTTGTCATCTTGCAAGCACATTGGTACTGTAGCTTGTGGTCTTCTTGCTGTTTGGGCTTTGACAAATACCACTCCTGTGTTTGCAGCTACTCAGAGGCTTCCTCCACTGTCGACAGAACCCAACCGATGTGAGCGTGCTTTTGTTGGCAACACTATAGGTCAAGCAAATGGTGTGTATGATAAGCCAATTGATCTTCGTTTCTGTGACTACACAAATGAAAAAAGCCAGTTAAAAGGGAAATCTCTTGCTGCTGCGTTGATGTCAGAAGCAAAGTTTGATGGTGCAGACCTCTCTGAAGTGGTAATGTCAAAAGCATATGCTGTTGGAGCCAGCTTCAAGGGTGTCGATTTCTCGAATGCGGTTCTAGATAGGGTAAATTTTGGGAAAGCCAATCTCCAAGGAGCTTTGTTCAAGAACACTGTAGTTTCAGGGTCCACATTTGATGATGCTCAATTACAAGATGCAGTTTTTGAGGACACAATCATAGGCTACATTGATCTTCAGAAACTGTGTGTAAATCCAACTATTAGTCCTGAAGGAAGAGCTGAATTGGGATGTCGATGA

Protein sequence

MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTVACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR

Homology

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BLAST of CmaCh18G013180 vs. ExPASy Swiss-Prot
Match: P81760 (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL17 PE=1 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 1.5e-76
Identity = 147/243 (60.49%), Postives = 185/243 (76.13%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSA---KRPQLVSPLAPSLARITCCA---TVDGAEPKESLSSC 60
           MA+  +  ++N     F+S    + P+       SL  + C A     +G   K+SL   
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREPR-------SLVTVHCSAGENRENGEGVKKSLFPL 60

Query: 61  KHIGTVACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPID 120
           K +G++AC  L    LT  +PV AA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+D
Sbjct: 61  KELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLD 120

Query: 121 LRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDR 180
           LRFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DR
Sbjct: 121 LRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDR 180

Query: 181 VNFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAEL 238
           VNFGK+NL+GA+F+NTV+SGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  L
Sbjct: 181 VNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVL 236

[Close]

BLAST of CmaCh18G013180 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.2e-10
Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 76  VFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           V A++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVVSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +V++ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

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BLAST of CmaCh18G013180 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.5e-07
Identity = 35/119 (29.41%), Postives = 57/119 (47.90%), Query Frame = 0


Query: 129 GKSLAAAL-----MSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQ 188
           GKSL  A      ++++ F  ADL   V + +  +GA   G D +N +    +F  A+L 
Sbjct: 61  GKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTSFKGADLT 120

Query: 189 GALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGCR 238
            A+    ++  + FDDA++  A F   ++   ++ KLC     VNP      R  LGC+
Sbjct: 121 NAVLTEAIMMRTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVSTRESLGCQ 179

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BLAST of CmaCh18G013180 vs. ExPASy Swiss-Prot
Match: P74221 (Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1152 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 30/98 (30.61%), Postives = 52/98 (53.06%), Query Frame = 0


Query: 126 QLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGA 185
           Q+    L  A +++A    ADL++  +  A+AV  +FKG   S A L       ANL+GA
Sbjct: 91  QMNWADLTYAKLNQADLSHADLTKASLYGAFAVKTNFKGAKLSGATL-----AHANLRGA 150

Query: 186 LFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVN 224
             + T ++G+    A L++A F+     + +LQ+ C++
Sbjct: 151 NLEQTNLTGANLFAANLREANFQKADFSWANLQEACLS 183

[Close]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL
Match: A0A6J1HX78 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111467480 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.3e-130
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL
Match: A0A6J1G0I9 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449567 PE=4 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 1.1e-122
Identity = 225/237 (94.94%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL
Match: A0A6J1JAQ7 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482783 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.1e-116
Identity = 212/237 (89.45%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MAT SIP SQNGF R F+SAK P +++P + SLARI+C A  DGAEP+ESLS C HIG+V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+P FAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

[Close]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL
Match: A0A1S3C2V7 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496052 PE=4 SV=1)

HSP 1 Score: 427.2 bits (1097), Expect = 4.6e-116
Identity = 213/237 (89.87%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MAT SIP SQNGF RSF+S KRPQ+V P   SL RITC AT DGA+P+E+LS CKHI TV
Sbjct: 1   MATLSIPPSQNGFSRSFFSTKRPQIVYPFPHSLPRITCSATRDGAKPRENLSPCKHISTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+PV AA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL
Match: A0A6J1CH87 (thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111011411 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 1.7e-115
Identity = 211/237 (89.03%), Postives = 220/237 (92.83%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MAT S PLSQNGF R FYSAKR QL+SP   SLAR +CCAT +GA+PKESLS C  IGTV
Sbjct: 1   MATLSAPLSQNGFSRRFYSAKRRQLISPFPRSLARFSCCATGEGAQPKESLSPCNRIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+PV AA QRLPPLSTEPNRCERA+VGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTSPVIAANQRLPPLSTEPNRCERAYVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEK+QLKGKSLAAALMS+AKFDGADLSEVVMSKAYAVGASFKG DFSNAVLDRVNFGKA
Sbjct: 121 TNEKNQLKGKSLAAALMSDAKFDGADLSEVVMSKAYAVGASFKGADFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTI PEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTIGPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. NCBI nr
Match: XP_022968163.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 474.2 bits (1219), Expect = 6.7e-130
Identity = 237/237 (100.00%), Postives = 237/237 (100.00%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV
Sbjct: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. NCBI nr
Match: XP_023541447.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 457.2 bits (1175), Expect = 8.5e-125
Identity = 228/237 (96.20%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLARITCCATVDGAEPKESLS CKHIGT 
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLARITCCATVDGAEPKESLSPCKHIGTA 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWALTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGA FKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGASFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. NCBI nr
Match: KAG6574243.1 (Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 450.3 bits (1157), Expect = 1.0e-122
Identity = 226/237 (95.36%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. NCBI nr
Match: XP_022945269.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata])

HSP 1 Score: 449.1 bits (1154), Expect = 2.3e-122
Identity = 225/237 (94.94%), Postives = 228/237 (96.20%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MA  SIPLSQNGF RSFYSAKRPQL+SPLAPSLA ITC A VDGAEPKESLS CKHIGTV
Sbjct: 1   MAALSIPLSQNGFSRSFYSAKRPQLISPLAPSLAPITCRAAVDGAEPKESLSPCKHIGTV 60

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVW LTNTTPV AATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 61  ACGLLAVWTLTNTTPVIAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TN+KSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 121 TNDKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 181 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 237

[Close]

BLAST of CmaCh18G013180 vs. NCBI nr
Match: XP_022984509.1 (thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 428.3 bits (1100), Expect = 4.2e-116
Identity = 212/237 (89.45%), Postives = 222/237 (93.67%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSAKRPQLVSPLAPSLARITCCATVDGAEPKESLSSCKHIGTV 60
           MAT SIP SQNGF R F+SAK P +++P + SLARI+C A  DGAEP+ESLS C HIG+V
Sbjct: 41  MATLSIPFSQNGFSRRFFSAKHPPIIAPFSHSLARISCSANRDGAEPRESLSPCNHIGSV 100

Query: 61  ACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 120
           ACGLLAVWALTNT+P FAA QRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY
Sbjct: 101 ACGLLAVWALTNTSPAFAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDY 160

Query: 121 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 180
           TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA
Sbjct: 161 TNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKA 220

Query: 181 NLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 238
           NLQGALFKNTV+SGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR
Sbjct: 221 NLQGALFKNTVLSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELGCR 277

[Close]

BLAST of CmaCh18G013180 vs. TAIR 10
Match: AT5G53490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-77
Identity = 147/243 (60.49%), Postives = 185/243 (76.13%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSA---KRPQLVSPLAPSLARITCCA---TVDGAEPKESLSSC 60
           MA+  +  ++N     F+S    + P+       SL  + C A     +G   K+SL   
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREPR-------SLVTVHCSAGENRENGEGVKKSLFPL 60

Query: 61  KHIGTVACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPID 120
           K +G++AC  L    LT  +PV AA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+D
Sbjct: 61  KELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLD 120

Query: 121 LRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDR 180
           LRFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DR
Sbjct: 121 LRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDR 180

Query: 181 VNFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAEL 238
           VNFGK+NL+GA+F+NTV+SGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  L
Sbjct: 181 VNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVL 236

[Close]

BLAST of CmaCh18G013180 vs. TAIR 10
Match: AT5G53490.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 286.2 bits (731), Expect = 2.4e-77
Identity = 146/242 (60.33%), Postives = 184/242 (76.03%), Query Frame = 0


Query: 1   MATFSIPLSQNGFPRSFYSA---KRPQLVSPLAPSLARITCCA--TVDGAEPKESLSSCK 60
           MA+  +  ++N     F+S    + P+       SL  + C      +G   K+SL   K
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLRREPR-------SLVTVHCSGENRENGEGVKKSLFPLK 60

Query: 61  HIGTVACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDL 120
            +G++AC  L    LT  +PV AA QRLPPLSTEP+RCE+AFVGNTIGQANGVYDKP+DL
Sbjct: 61  ELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDL 120

Query: 121 RFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRV 180
           RFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASFKGV+F+NAV+DRV
Sbjct: 121 RFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRV 180

Query: 181 NFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCVNPTISPEGRAELG 238
           NFGK+NL+GA+F+NTV+SGSTF++A L+D VFEDTIIGYIDLQK+C N +I+ EGR  LG
Sbjct: 181 NFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLG 235

[Close]

BLAST of CmaCh18G013180 vs. TAIR 10
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 284.6 bits (727), Expect = 7.0e-77
Identity = 137/195 (70.26%), Postives = 167/195 (85.64%), Query Frame = 0


Query: 43  DGAEPKESLSSCKHIGTVACGLLAVWALTNTTPVFAATQRLPPLSTEPNRCERAFVGNTI 102
           +G   K+SL   K +G++AC  L    LT  +PV AA QRLPPLSTEP+RCE+AFVGNTI
Sbjct: 56  NGEGVKKSLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTI 115

Query: 103 GQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAALMSEAKFDGADLSEVVMSKAYAVGASF 162
           GQANGVYDKP+DLRFCDYTN+++ LKGK+L+AALM  AKFDGAD++EVVMSKAYAV ASF
Sbjct: 116 GQANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASF 175

Query: 163 KGVDFSNAVLDRVNFGKANLQGALFKNTVVSGSTFDDAQLQDAVFEDTIIGYIDLQKLCV 222
           KGV+F+NAV+DRVNFGK+NL+GA+F+NTV+SGSTF++A L+D VFEDTIIGYIDLQK+C 
Sbjct: 176 KGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR 235

Query: 223 NPTISPEGRAELGCR 238
           N +I+ EGR  LGCR
Sbjct: 236 NESINEEGRLVLGCR 250

[Close]

BLAST of CmaCh18G013180 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11
Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 76  VFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           V A++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 79  VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 138

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVVSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +V++ S
Sbjct: 139 DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 198

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 199 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of CmaCh18G013180 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 66.6 bits (161), Expect = 3.0e-11
Identity = 48/166 (28.92%), Postives = 79/166 (47.59%), Query Frame = 0


Query: 76  VFAATQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSQLKGKSLAAA 135
           V A++  +P ++ E NR E A      G  +       DL    ++NE    +  +  +A
Sbjct: 5   VIASSSGVPAMA-ELNRFE-ADTRGEFGIGSAAQYGSADLSKTVHSNE--NFRRANFTSA 64

Query: 136 LMSEAKFDGADLSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGKANLQGALFKNTVVSGS 195
            M E+ F G+  +   + KA A  A+F G D S+ ++DR+   +ANL  A+   +V++ S
Sbjct: 65  DMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEANLTNAVLVRSVLTRS 124

Query: 196 TFDDAQLQDAVFEDTIIGYIDLQKLC-----VNPTISPEGRAELGC 237
               A+++ A F D +I  +  Q LC      NP    + R  LGC
Sbjct: 125 DLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 166

The following BLAST results are available for this feature:

BLAST of CmaCh18G013180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P81760	1.5e-76	60.49	Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
Q8H1Q1	4.2e-10	28.92	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
B1WVN5	7.5e-07	29.41	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
P74221	2.0e-04	30.61	Uncharacterized protein slr1152 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of CmaCh18G013180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX78	3.3e-130	100.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A6J1G0I9	1.1e-122	94.94	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JAQ7	2.1e-116	89.45	thylakoid lumenal 17.4 kDa protein, chloroplastic-like OS=Cucurbita maxima OX=36...	[more]
A0A1S3C2V7	4.6e-116	89.87	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A6J1CH87	1.7e-115	89.03	thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Momordica charantia OX=3673...	[more]

BLAST of CmaCh18G013180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968163.1	6.7e-130	100.00	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]
XP_023541447.1	8.5e-125	96.20	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pe...	[more]
KAG6574243.1	1.0e-122	95.36	Thylakoid lumenal 17.4 kDa protein, chloroplastic, partial [Cucurbita argyrosper...	[more]
XP_022945269.1	2.3e-122	94.94	thylakoid lumenal 17.4 kDa protein, chloroplastic [Cucurbita moschata]	[more]
XP_022984509.1	4.2e-116	89.45	thylakoid lumenal 17.4 kDa protein, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CmaCh18G013180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53490.1	1.1e-77	60.49	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.2	2.4e-77	60.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G53490.3	7.0e-77	70.26	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	3.0e-11	28.92	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	3.0e-11	28.92	Pentapeptide repeat-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.160.20.80		coord: 113..237 e-value: 2.2E-21 score: 77.4
None	No IPR available	PANTHER	PTHR47485:SF1	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..237
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 115..219
IPR001646	Pentapeptide repeat	PFAM	PF13599	Pentapeptide_4	coord: 160..218 e-value: 1.2E-7 score: 31.8
IPR044195	Pentapeptide repeat containing protein TL17-like	PANTHER	PTHR47485	THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC	coord: 1..237

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G013180.1	CmaCh18G013180.1	mRNA