CmaCh18G012250 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G012250
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Location	Cma_Chr18: 9651692 .. 9655544 (-)
RNA-Seq Expression	CmaCh18G012250
Synteny	CmaCh18G012250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGTATCTCTTTTTCTTCCTCTGTTGTAAATGGGTAATTTCTGAAGGAATTTGATAACATTTCTTTCGAATGGGTTTAGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAGTAAGCAATCACAGTTTTCTGGGAACGCCTTTGCTTTTAGGTTCTTGTTGGGGCTTTCATTATTTCTGTTATTTGATGTGTTTTTTTTTTGGTAGAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGTAACATACGAGATATTACATTGTTGACCTGATTATACAGTTATTTTTTTAATGTTCTTCTTCTACTTGCTGGGAAACTTCCGTTAATCTCTGTAAGAGTGTGGAAAAAGGAGAATTCGAGGGACTTGAAACTGCTGGCTCGTGTAGTACTTAAAGATCAAGTAGGGATTGTGATGGAAAATAAGAGACTGGGACGGGGGGGTATATATATTTGATGGATCTTGTTAAAAGAGAATGACCTTAACGATGACTGGAGAGCCTACTGAAAGCTTTGCTATCAAAGTGTCCTGATTAGATTGAGATGAACTTTTATGTGACCGGATTTGTAGAATAAAATTGTATCCCTTAAGAACCGGATGGGCATCTAACTCCTTCATTCAGGCTCCACTTTGCTCGGGGGATATAGCTCAGTTGGTAGATCTCCACTCTTGCAGTTGGGTCGTTGCGATTACGGGTAGGATGTCTAATTGTCCAGGTGATCGATTTCGGTTGGGTGGATGCCTAATGAAAATCCTATCTAATAAGTTCAAAGATGCTTCACCTGTTCAATCCAACTCTTCCCAAAGTTGATCCAACCTCCCTTGAATTTGAATAAGATTGTCATTCTAACCCTGATGGTTTTCTAGACATTCTATGTGTAGCGTTCATCTCGGAATCTTCTTGAAGAGTGAAGCTCTCTTATTCGTCCTCTATCTTGCGTAAATTTCTTTTCTAATGTCTTGTTATTGTTAATTCAATTTGGCTCAAATGTCACCTCAGATCTCTTTATCTAGCCTTCCGTCTCTATCCGCTAGCAAATATTGTTCTTTTTGGGCTTTTTCTTTCGGGCTTCCCCTCGAGGTTTTTAAAAAGGTGTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTACTCTCCAACCGACGTGGGATCTCACAATCTATCCCATTCGGTTTCAACAATTCTCCTCTCCAACCAATGTGGATCTCAAATATTTGCTAAGACCATACAAAAAAAAGAAGTCTCACCACCTCCTTATATAAGATGTTCTCACATTGTCGACGAAGCCATTATCACTTTTTTGTTCTACATTCTAGCATCATACCATTCCATGAGTTGCTGGCTTGCGTATTAGAGTAACTTCATCAGGCACCTTGTTGATGTCTAGTTGAAGCATTGGGACTTTTGCTTGCAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGGTATAGTATCTCACCAATTTTTGTTGTTAGAGAACACGCTGTGTTCAAAAGATTAAATTATTTAGCTTCCCTTGACACTCTCTAAATTGTAATTTTTGCATTTATCTTTGGAATCAGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGGTATATGATTCCATTTTTTATGGTCTCTTTTGCTCTCTTGCCGCACATGGAATAATGTCTTAGAACGACCATAATTAGTGGAGAAAATGTTATCTCCTTAAAAATCGCTTATGCTCATCAATGGAATAATTAGAAAAATAGGTTGAAGGGAAGTAGTTCTAACTTTGAACTTTTACATAGAAGAACGTAAAGGGGGCTTAGAGAGCATAGGAATGACTAGTACTCTAAAGGACTTACGTTTTGATAATCAACCGCTATCAATATTTGAAGAAATCTGCAATGTCATATTGGTTTCTTTTCCTTATGGTGTTGAGGTGTTTCTACTGGTTGTTTCTTCGATGAAACATGCATTGATAGTAATAGTTAAACAAATGCTATGATGTTCTATGAAACCTTTCAAAATCATGGTTTTCACAACTTTTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTAAGTAATAAATCTCCAATATATTTTTTGGCTATTGACGTGCTTTTCTCAGAAGTCATGAGCATGGTACTGATACTCATTTTTGCCAATAAATTAGAGAATGTTACTATTTTCTAGTTCAACAATCTTATTGACGCCCATTTCTTAGAGCTCACTAAGCTTTGCATTGATTGACGTACAAAAATTACTTTTTGATGCAACTGTTTCCAGCAAGACATGGAAAGAACAGAAACGTTACGCTGTGGATTTCCTTAGAAACTTAGGAAAGGGATATAACCTCTCTTTCAATGCCCTTTCTTATTTCTTCACTGTCTTTGGGCCAAAATCCATGAGAGGTGCTTGTAATTTTCCACTTAATATAATTTCTATGAACCTGCCTGTAACTGCCAAAGCTCACCGCTAGCCGATATATTTTTTTTTTGGGCTTTCCCTCCAAGTTTTTTAAGACGCATCTACGATGGAGAGGTTTCTACACTCTTATAAACGGTGTTCCGTTCTCCTCCTCAATCGATGTAGGATCTCACACTGCCTTTTTACGAAAATGATTTTGTTCTAAATTCTCTTTTATTTTATTCCTAATGAAGTAAATGCTTGGAATAAAGTTTGGAGTATCCTGCACCTATTTGGTACATGTTGAAATACGCGCTTGGACAACCAAATGAATGCTTGTTACGAATTTGTATAGAACAGAAGCTTAGCAGATCTTGGCAGATAATTTGGACATGATGCAGCGTCAACGTCTATAGAGAACCTTTGATTTCTTGGCCTGATCTGCTGAACTCAACTCTTTTTCCTCAAATCTAATTTGTTGGGGTGAAAATGTAAGAATCTATTAGAATCTATATGTTTGGGCGAAGAAAAATGTACATGAAAGAATATATGAAGAACAAATAAGGTCATACAAGTATCCCAGTGACCCCTTTTAGAGGTACCCTTCTTTAAGAACTATAATTTAATTTCTCCATGTACACAAGGAAAATGAAAAACAAAATTTATCTTTCAATTCTCTCTAACTTGAGCTCCTGACTCTTCTTTTTGTTATCAGGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

mRNA sequence

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

Coding sequence (CDS)

ATGAGCTGCACAATTCTCTCTCCCGACCCGTTAATTCGGTTGTCATCCACTCCCCGATTTCGCGCTAAAAACGGGTCGAAGAGTCCAGTGATTACTGCTCGTCTTGACGATTCTAAGAACTCGCCCAATCGCCAACTCAATCTCTCTGTTCTTCGCTTCACACTTGGGATTCCTGGATTGGATGAGTCTTACTTACCCAGATGGATTGGTTATGGATTTGGCTCGCTTCTGCTTTTGAATCACTTTGTTGGTTCGAGTTCAGCTGCTCCCATCACCTCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCTGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTGAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGGGGCTGAGCAAATATTTGTTTTGTCACAAAATGTATCGGATAATGTGAAGGATGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACAAACAGTATATCAGTGTTAATACTGATTCAAGGGGAGTTATGCGTTCGAGGATACTGGAATAGTCCAAATGATATATCAGGAGCAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAATGATTCCCTCTATTTTCCTCAGATTTCAGAATCTGGACTTTGGCAAATGCTATCTAAGGGCACTCGCTCAGTTTTGGTACAGCCAGTGGCTCAAAATCTAAACCAAAGTGGCAATGAGATGGAAAAGATTGGAGGGTTCATATTGGTGGCTTCAAGTTTAAGTTATGCATTTAGTGACAAAGATAGAGCCTGGATAAGAGCTCTTGCTACCAAGTTTGATAATGGGGACATATCGTGGGGAAGTCGAAAGGTCACTCTGTTCAATGAACAACGGAGATGA

Protein sequence

MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQRR

Homology

[Close]

BLAST of CmaCh18G012250 vs. ExPASy Swiss-Prot
Match: Q9FJ81 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CCB2 PE=1 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 3.4e-81
Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 21  RAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLN 80
           RA+  ++    T        + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLN
Sbjct: 19  RAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLN 78

Query: 81  HFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVL 140
           HF   S++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V   + +LPE  EQ+FV+
Sbjct: 79  HF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEEGEQVFVI 138

Query: 141 SQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQ 200
           S N+ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF+++
Sbjct: 139 SSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKK 198

Query: 201 LQSIGLSALNDSLYFPQISESGL-WQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILV 260
           +  IGL+ + ++LYFPQ + S L   +L  GTRS+ VQP+ QN     NE +K+ GF+LV
Sbjct: 199 VDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLV 258

Query: 261 ASSLSYAFSDKDRAWIRALATKF 283
           AS+  YA+SDKDRAWI A+A KF
Sbjct: 259 ASTAGYAYSDKDRAWIGAMAEKF 273

[Close]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL
Match: A0A6J1HX31 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111467648 PE=4 SV=1)

HSP 1 Score: 595.9 bits (1535), Expect = 9.5e-167
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300

Query: 301 RR 303
           RR
Sbjct: 301 RR 302

[Close]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL
Match: A0A6J1G0N4 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449603 PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 1.0e-160
Identity = 294/302 (97.35%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGL
Sbjct: 17  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGL 76

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 77  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 136

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRG
Sbjct: 137 GAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 196

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVA
Sbjct: 197 YWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 256

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS GSRKVT  NEQ
Sbjct: 257 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSRKVTPSNEQ 316

Query: 301 RR 303
           RR
Sbjct: 317 RR 318

[Close]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL
Match: A0A6J1HXW3 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111467648 PE=4 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.6e-160
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG 291
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG 290

[Close]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL
Match: A0A6J1CJH9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011568 PE=4 SV=1)

HSP 1 Score: 477.2 bits (1227), Expect = 4.9e-131
Identity = 243/287 (84.67%), Postives = 263/287 (91.64%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           M+ +ILSP+PLIRL+STPRFRAK   K+P ++ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MTGSILSPNPLIRLTSTPRFRAKTRLKAPAVSARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHF GS+SAAP T AQLRTEALG+SLAAFSIALPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFFGSNSAAPTTPAQLRTEALGLSLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEA+LPEG EQIFVLSQNVSDNVK+DLAWATYILLRNTNSISVLI I+GELCVRG
Sbjct: 121 GAVPSGEASLPEGTEQIFVLSQNVSDNVKEDLAWATYILLRNTNSISVLIQIRGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDI GADL+AWFEEQLQSIGLSALND LYFPQIS+S LW+ML  GTRSVLVQPV 
Sbjct: 181 YWNSPNDICGADLVAWFEEQLQSIGLSALNDDLYFPQISDSELWKMLPNGTRSVLVQPV- 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDI 288
               QSGN+MEKIGGFIL+ASSLSYAFSDKDRAWIRALA KF + DI
Sbjct: 241 ---KQSGNKMEKIGGFILLASSLSYAFSDKDRAWIRALANKFIDRDI 283

[Close]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL
Match: A0A1S4DSW9 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484048 PE=4 SV=1)

HSP 1 Score: 471.1 bits (1211), Expect = 3.5e-129
Identity = 240/284 (84.51%), Postives = 258/284 (90.85%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           M  +I SP PL +L+S   FRAK+  K+P I+ARLDDSKNS N+QLNLSVLRFTLGIPGL
Sbjct: 1   MISSIPSPSPLNQLTSALPFRAKSKMKAPAISARLDDSKNSANQQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTEALGISLAAFSIALPYLGKFL+
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPYLGKFLK 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEG EQIF+LSQ VSDN+K+D+AWATYILLRNTNSISVLI  QG LCVRG
Sbjct: 121 GAVPSGEATLPEGTEQIFLLSQIVSDNLKEDIAWATYILLRNTNSISVLIQTQGALCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDIS ADLLAWFEEQLQSIGLSAL D++YFPQISESGLWQML KGTRSVLVQPV 
Sbjct: 181 YWNSPNDISSADLLAWFEEQLQSIGLSALKDAVYFPQISESGLWQMLPKGTRSVLVQPVV 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDN 285
           QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD+
Sbjct: 241 QNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDD 284

[Close]

BLAST of CmaCh18G012250 vs. NCBI nr
Match: XP_022968395.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 595.9 bits (1535), Expect = 2.0e-166
Identity = 302/302 (100.00%), Postives = 302/302 (100.00%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300

Query: 301 RR 303
           RR
Sbjct: 301 RR 302

[Close]

BLAST of CmaCh18G012250 vs. NCBI nr
Match: XP_022945332.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945333.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945334.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945335.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945336.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945337.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945338.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945339.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945340.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata] >XP_022945341.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 575.9 bits (1483), Expect = 2.1e-160
Identity = 294/302 (97.35%), Postives = 297/302 (98.34%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSP+RQLNLSVLRFTLGIPGL
Sbjct: 17  MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPSRQLNLSVLRFTLGIPGL 76

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 77  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 136

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRG
Sbjct: 137 GAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 196

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVA
Sbjct: 197 YWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 256

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS GSRKVT  NEQ
Sbjct: 257 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSRKVTPSNEQ 316

Query: 301 RR 303
           RR
Sbjct: 317 RR 318

[Close]

BLAST of CmaCh18G012250 vs. NCBI nr
Match: XP_023542853.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542854.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542855.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542856.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542857.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542858.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023542859.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 574.3 bits (1479), Expect = 6.1e-160
Identity = 293/302 (97.02%), Postives = 295/302 (97.68%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSST RFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 14  MSCTILSPDPLIRLSSTHRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 73

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 74  DESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 133

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRG
Sbjct: 134 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 193

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISG DLLAWFEEQLQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVA
Sbjct: 194 YWNSPNDISGTDLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 253

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGSRKVTLFNEQ 300
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDIS GSRK TL NEQ
Sbjct: 254 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISGGSRKFTLSNEQ 313

Query: 301 RR 303
           RR
Sbjct: 314 RR 315

[Close]

BLAST of CmaCh18G012250 vs. NCBI nr
Match: XP_022968386.1 (protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968387.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968388.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968389.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968390.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968391.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968393.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima] >XP_022968394.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 573.2 bits (1476), Expect = 1.4e-159
Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG 291
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWG 290

[Close]

BLAST of CmaCh18G012250 vs. NCBI nr
Match: KAG6574156.1 (Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 555.8 bits (1431), Expect = 2.2e-154
Identity = 282/291 (96.91%), Postives = 287/291 (98.63%), Query Frame = 0


Query: 1   MSCTILSPDPLIRLSSTPRFRAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60
           MSCTILSPDPLIRLSST RFRAKNGSKSP+ITARLDDSKNSPNRQLNLSVLRFTLGIPGL
Sbjct: 1   MSCTILSPDPLIRLSSTHRFRAKNGSKSPLITARLDDSKNSPNRQLNLSVLRFTLGIPGL 60

Query: 61  DESYLPRWIGYGFGSLLLLNHFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120
           DESYLPRWIGYGFGSLLLLNHFVGS+SAAPITSAQLRTEALGISLAAFSIALPYLGKFLE
Sbjct: 61  DESYLPRWIGYGFGSLLLLNHFVGSNSAAPITSAQLRTEALGISLAAFSIALPYLGKFLE 120

Query: 121 GAVPSGEATLPEGAEQIFVLSQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRG 180
           GAVPSGEATLPEGAEQIFVLSQ+VSDNVKDDLAWATYILLRNTNSISVLI IQGELCVRG
Sbjct: 121 GAVPSGEATLPEGAEQIFVLSQSVSDNVKDDLAWATYILLRNTNSISVLIQIQGELCVRG 180

Query: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDSLYFPQISESGLWQMLSKGTRSVLVQPVA 240
           YWNSPNDISGADLLAWFEEQLQSIGLSALND+LYFPQISESGLWQML KGTRSVLVQPVA
Sbjct: 181 YWNSPNDISGADLLAWFEEQLQSIGLSALNDALYFPQISESGLWQMLPKGTRSVLVQPVA 240

Query: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDISWGS 292
           QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGD+S GS
Sbjct: 241 QNLNQSGNEMEKIGGFILVASSLSYAFSDKDRAWIRALATKFDNGDLSGGS 291

[Close]

BLAST of CmaCh18G012250 vs. TAIR 10
Match: AT5G52110.1 (Protein of unknown function (DUF2930) )

HSP 1 Score: 303.1 bits (775), Expect = 2.4e-82
Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 21  RAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLN 80
           RA+  ++    T        + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLN
Sbjct: 19  RAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLN 78

Query: 81  HFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVL 140
           HF   S++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V   + +LPE  EQ+FV+
Sbjct: 79  HF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEEGEQVFVI 138

Query: 141 SQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQ 200
           S N+ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF+++
Sbjct: 139 SSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKK 198

Query: 201 LQSIGLSALNDSLYFPQISESGL-WQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILV 260
           +  IGL+ + ++LYFPQ + S L   +L  GTRS+ VQP+ QN     NE +K+ GF+LV
Sbjct: 199 VDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLV 258

Query: 261 ASSLSYAFSDKDRAWIRALATKF 283
           AS+  YA+SDKDRAWI A+A KF
Sbjct: 259 ASTAGYAYSDKDRAWIGAMAEKF 273

[Close]

BLAST of CmaCh18G012250 vs. TAIR 10
Match: AT5G52110.2 (Protein of unknown function (DUF2930) )

HSP 1 Score: 303.1 bits (775), Expect = 2.4e-82
Identity = 153/263 (58.17%), Postives = 202/263 (76.81%), Query Frame = 0


Query: 21  RAKNGSKSPVITARLDDSKNSPNRQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLN 80
           RA+  ++    T        + ++QLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLN
Sbjct: 19  RAQRSTRIFARTENDSPQSKTSDQQLNLSVLRFTFGIPGFDESYLPRWIGYGFGSLLLLN 78

Query: 81  HFVGSSSAAPITSAQLRTEALGISLAAFSIALPYLGKFLEGAVPSGEATLPEGAEQIFVL 140
           HF   S++API+ +Q+R+EALG+SLAAFSIALPY+GKFL+G+V   + +LPE  EQ+FV+
Sbjct: 79  HF---SASAPISESQMRSEALGLSLAAFSIALPYIGKFLKGSVVE-QRSLPEEGEQVFVI 138

Query: 141 SQNVSDNVKDDLAWATYILLRNTNSISVLILIQGELCVRGYWNSPNDISGADLLAWFEEQ 200
           S N+ D++K+DLAWATY+LLRNT++I+VLI +QGELCVRGYWN P+ +S A L  WF+++
Sbjct: 139 SSNIGDSLKEDLAWATYVLLRNTSTIAVLISVQGELCVRGYWNCPDQMSKAQLHDWFKKK 198

Query: 201 LQSIGLSALNDSLYFPQISESGL-WQMLSKGTRSVLVQPVAQNLNQSGNEMEKIGGFILV 260
           +  IGL+ + ++LYFPQ + S L   +L  GTRS+ VQP+ QN     NE +K+ GF+LV
Sbjct: 199 VDEIGLADVKETLYFPQYAGSALSLDILPDGTRSLFVQPLVQNT----NEPQKVNGFLLV 258

Query: 261 ASSLSYAFSDKDRAWIRALATKF 283
           AS+  YA+SDKDRAWI A+A KF
Sbjct: 259 ASTAGYAYSDKDRAWIGAMAEKF 273

The following BLAST results are available for this feature:

BLAST of CmaCh18G012250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FJ81	3.4e-81	58.17	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Arabidop...	[more]

BLAST of CmaCh18G012250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HX31	9.5e-167	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 ...	[more]
A0A6J1G0N4	1.0e-160	97.35	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic OS=Cucurbit...	[more]
A0A6J1HXW3	6.6e-160	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
A0A6J1CJH9	4.9e-131	84.67	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
A0A1S4DSW9	3.5e-129	84.51	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]

BLAST of CmaCh18G012250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968395.1	2.0e-166	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 ...	[more]
XP_022945332.1	2.1e-160	97.35	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita ...	[more]
XP_023542853.1	6.1e-160	97.02	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita ...	[more]
XP_022968386.1	1.4e-159	100.00	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 ...	[more]
KAG6574156.1	2.2e-154	96.91	Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic, partial [C...	[more]

BLAST of CmaCh18G012250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52110.1	2.4e-82	58.17	Protein of unknown function (DUF2930)	[more]
AT5G52110.2	2.4e-82	58.17	Protein of unknown function (DUF2930)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021325	Cofactor assembly of complex C subunit B, CCB2/CCB4	PFAM	PF11152	CCB2_CCB4	coord: 65..282 e-value: 3.0E-57 score: 193.1
IPR044970	COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic	PANTHER	PTHR36403	PROTEIN COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, CHLOROPLASTIC	coord: 16..283

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G012250.1	CmaCh18G012250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly