CmaCh18G011640 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G011640
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Homeobox-leucine zipper protein family
Location	Cma_Chr18: 9324568 .. 9336161 (+)
RNA-Seq Expression	CmaCh18G011640
Synteny	CmaCh18G011640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATCAAGATCATCCCTCTTCTTCTGACAGCTGCTGCCTTGCTAACATCAGTATAGATTTAGCATAGCAGGTAGCAGCCCACAAGCCTTCTTCTTAAGTTTAGACCATAATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCCCGTTCCTCCTCCAGGGTATCTCTGTTTTTCTACACTCTGTTCATGTTTATTTCAGAAATGGGTTACACCCACAATCTCATTCTTCTTAATTTGTGGAGTTTTATAGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGAGAGGTGAGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATGTAATAATGAATGATCTATTATCTCTATCATTCTTCTTCTTCTTCTTCTATAGATTTTGGTCTTCATCAGCTCAGATAATATGGAATATGCCTACACACAATTATATATATATATATATGTTGTTATAAAGTCGTATAATAGAAGGGCTTGTCTAGAGTTCGTTTTAAATCATATGAATTACCATCACTATGCTCTGAGATCAATTTTGTTTATAAATTTTTCAAAAGGCCGCCGGTTTTGTTCTATCTTATCCATGGTTATTATCGTTATCTTTCCTTCCTTAGTGTTGTTGCTTTATAAAGAAAGTCTGAATGAGCTTTAAAGTCCTCTGTTTTGGTGCCCACAAAACCCCATTTGACTGCGACACCACAGAAGAAGAGGAGAGTTCTGAAAGTTGTTTTCTTTTTCCCTTCAAAACAAAAATGTTGAATTCCTGCACGTGCCAGTTTGTGTAGCATTTAAGACCATACCCTTTTCAAATCTCCTCTGTTTTCCTAAACAGTTCATATTCTCTGGTGTTTCTTTCTGAGGAATTATTGGGAGTGACAGTTCTGAACGACCCTTTTTCTACCCACCATTAATCATGGGGTTTTGTTAAAAGTATGAAGAACATGAGGATTTAGGATAAAATACTGAGGAAAACTCAAGCTAAACGTAGTTAACAATGTATAAACGAGGCTGCTTTATGCTTGAAAAAGAGAAAAGAACAGAGGATACCCAAGTCAAAGCGTCAGAGTGGAAGAAGCTCTCGTGAGTTGTGAAAGTTAGCAGGAGGTAGCAGAAGATCCCCACTGACAAACAGAAGAAACATCGAAGCCCCAAAGTCTTGTCGACCGACTGCTGTCTTTTCTGCATAACCTTTCATAAAATTTTAATGGTTGTTTCCATAAATGGAATCCAAAGAAGAGGAATGCGGACATACTTCATATGTTTCTGAGTGAATCGCTTTTGAATGTGATCCATTGAAAAGAGGAGCCTCTTACCCATGAAGTAATTCGGTCTAAAGTTCGTAGACCCAGATGTTTGCAGGCTTAAATTATGAATCAAAGAAGGCCCATTGTTCAATCTGAAGCGTGGGCAGCCCAGCTCAGCCCACTGAGCTCTAAAGTTCTTCAGTTCCTCTTTTTCTTCTGAAACTTCATTTTCTGCTAGTCAATTCGATTGTCTCCTCCGCAAGTTACATTTCAACGGGACAAGAGACGAATCAATTTACTGTCGCAGCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTATTCATTTCTTCCAATTGGGAGTTTGATTTCATGTCCTTGACTCCGTAATTCCATGATCCATATATTTAAAAGACATCAATAGATCTTTCTAAATGTGATCAAGTTTGAAGAGGCTGTTTAGTAAATCATACCTTAAAATTATGGCCTTTTTGTTTGATTTTGTTTTAGTTTTTTGTTCTTTCAAAAGCGCTTGGTGTTAGGATTTGTGGTTTCATGAAAACAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTGTGAGTATTCAATTTATAAATGCTGAATTGACCAATGTGTTTGATGTGGCAGTTTTGATTGCAAAAAGAAAAGGAGGGGCATTTTTTTTCCTTCTCAATTGGAAAAACTGTAGCACAATTGGGTAACAGCTTAAGACCACTGGTAGCAGATATTGTCCACTTTGGCCTATTACGTATTGTCGTCAGCCTCATGGTTTTAAAATGCGTTTATTAGAGCTGGACACCGTCTACATACCCGAGCTTATAAGAATGTGGAAACCTCTCCCTAGTAGATGCGTTATAAAATCATGAGCCTGACGGCGATACGCAACTGGTTAAAACGGACAATATTTGCTAGCGGTGGTCTTAGGCTGTTACAAATGGTATCAGACACATACACCAAGCGGTGTACCAGCGAGAACGCTGGCCCCCAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACAAAACATTCCTTATAAGAATGTGGAAACCTTTCCCTAGTAAACGCGTTTTAAAACCGTGAAGCTGATGGCAATATGTAATGAGCAAAAGTGGATAATATCTGCTAGCTGTGGACTTAGGCAGTTACTAAATAGTGAAGGGTCCTTTCGCTTCCTCAAGTAACGCCCCTTCGTTAAATCGACAACAATGATTAGAATCAAAATAACATCGAAAATGGCTTTCAAATAATATAAATTGCTTCATCATCATTGAACTGTAGAAGTGTGGTTTTGGCTTCATCAAATTTGAAGCAGCCTTAATAGGAATTTGCTACTGCGCTCGAATGTTCGACATGGATGTAACTATGCGTTCTATTGAAAAGAAAAACGGACCCGTTTATTATTGTATAGAGATGGCATTTAAATGGTTAGGCACATGCAACATTGTTGTTGTTGTTGAATCTGTGATTAGTGATAACAACTTTGTTAGCATTTAGAATTCATAATTTGTAATACTTACTGTTGAATCTGCAGAACGCATTTATCTCACTATCTTCTCTTTTGCTGCAAATTTGCATTGTTTTTAGGAATGAACTTGATGGAATTTTTACTATATCAAATGAATTTCCTCTTGGCATCAAATGATTAAGGAATTTCTATATGGGTACTTGCAGTTTGTGAGCTTCAACTGTTTGAGTTTGATCATTCTGTTTATGTTCTGTCTACTATTTGGTTTTCAATCAACAATCGTTTCTGGTGATTTGGTTAATGAACATGTTGTAGAGTCCAATATCTGTTCATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGACGGTACTCCTGCTGTAAGTGTCGAAAATCGACAAATGATATTCATTAATTTTTTCCAACTCTTGAAATTTGCATATGTTTAGTTCCCATGGTCGAACTTTGATTAATTAACGAGTTCTTTATCGTATAGTCGGCTCAAAGAAGTCAGTTTGCTTCCACCACTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACAAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCTGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGGTAGTCGTGGTCTCGAACATTAAGACGTTAGAGAGTCCTTCTGCTCATCCATTGTAAATAAAGCACTGATATTTTTATCAGAACGTACATTCATCTGAAAGCTGTATGTATAAATTTTACATTTCATAGAGTTCAATCACACCAGTCATTTGAACCTCTAAAATTTGCTAAATTTTAGCCTCTGAATAGTCGGTAAAATACGAGTCGAATCGTCTCCCAGATTGTACTTTTTACTATCCTGCTAACAGATTGTCTTCTCCTTAATCTGTTTGTTCGTTGAAGTTACTCTTAAATTCGATAGACTTATTTGGTTCGTTTAGACTCTATAGGGAGGCCATATGGATGGATGCATGATTTGGGCGCAGCAAGAATGAAGTCCCGTAAGCAATATCATGATTTTGCCGCCTTGGATGGTTCCTTCCAGCTGCAATTGTCTGAGACTTGCAGCTTGCTCCAGCAGGCAATAGCTTCCTACAAGTTACAGGTCGGTCTGGTCTTTAATTTTTTTGCTGTCGACTGCGGTCTCATCGACTAGACATCAAACATGCATTTTTATTATATGATTCTTGGCATTTAGGCAACAAGAGGCATAAACTCGAATGATAATGAATTGATTAACTCTCAGCCCTAACATTTATATCCATGCATTGCACAATATTCCCACACACTGTGGCTGTATTGTCATGGTCGGAGTTGATACATTAGGAAGTGATCATGGCCCCTTCTTCTTTATTAAACAGCATCTTCCCTGTATGAATCAACCCTTTTCTTGTACGTTGAAAAACATCACATCCCATAAAATAGAAACTGTTTTACTCGGATTGAAACAGCCAAGCTAACACTGTTGGTAGGCTAAGCATGATCCGGGAAATATTCAACCTGATTTAGTCGATTCGAAACGTTCTTAAGTGAAAATTATGGAGCTGGAAAAGGAAATAAACAACAAAAAAAGGAAAGTGGAAGAAGGAGCTTGTATATTCTGAGTTTTGCAGAAAATGATGGTAGAAGGAGCAATTATGTTGGGGCAATTGTAGTGTACAAAGTTTTGTTTTTGGGGGTATCTGAAATAATTGTCCTTTGGAAAACTGTTTGGACCTTTTTGTTGCTGTGATGGGTTAAGAGACAGATCCCCTTTGGCTGGTGGGTCAGTCATAGTGTGCCATTGTTGGTGTGGGTCTTAGCAAATAACAGTGACTTGAAGAAACTGAGTGAGCCCCTAGGAGGGAAGTCATTGTTCCTCCAAAGGAGACTCCTGCCTCCTTTCCTACACTCCTTTAACCAACACACCTGCTTTCCCTTCCGTTTACTCACTTCGCCAGCCAGCCTTTATGTTTATCTTTCACTCAACTCATCGAGGGAGAAGTTTTAGATCTATACATTACGTATCGCCGTCAACCTCACTGTAATGGCCTAAGCCCACCACTAGCAGATATTGTCTTCTTGGAGCTTTATCTTTTGGGTTTCCTCTCAAAGTTTTAAAACGCGTCTGCTAGGGAGAGATTTTCACACCCTTATAAATAATGCTTCGTTCTCCTCTCCAACCGATGTGGGCTCTCACACTTACGGTTTTAAAAACGTGTCTATCAGGAAGAGGTTTCCACTCTCTTATAAGGAATTTTTTCGTTCCCTTCTTCAATCGATGTGAGATCTCACATAGTGTCTATGTTTGTCGCCCTCCTCAAGATGAACGAATCTGGAGGCCTCGAGCCTTTGATTTCATCTTCCTTCATGTTAGTGAGGGGAAGCAGATGACGTCTTTTCATCACTATGGAGAAAACAAAAAATGAGGTTCACATCAACCTTATTTTAATATATCAAAAGGCACACACACACACTCATATCTATGTGTGTACCAATCTTATCCTTTCCTTCCTTTTTCTTTCTTGCATCCTACGTTATGTTTTGTAAAGCATTCCAAATCCTTCGTCAAAGTAAAGGGCCCAACAGCATGAATGGCCATCTCTTCTTCACTGATTGGCAGAAAGCAGCCATCTGCTTCAAGGGATGGTTCCCCCCCCCCTTCTTCTAAGACCCTGTCCTTCCAGATTGGAGAACACAGGAAAAGTGAAAAGTGAAGTCTGTAAAACCATCCAATTTCTCACCATATCCACAGATTTTGGTCTAAAACTGGTTAGAATAAGAAGTTTTTTTTCAAGTACAGACAAAGGAAACTAAGATATAAACGTTTCTCATAAACATATGAATCCAAACAAGAATTCAAGTCACATCCATCGCGATGTTAATCTTGAAAGAACTTTATTAACAAGTTGGATGAACCATGATTGAACAATGAGTTAAGAATGATTAAGCAATGAAGAAGGAGGGTAGAATAAGCCAGGAGTTTATGTAGGAGAACAAGGAATGAAAATCCCTTCAAAAAATAGATATCTTATAGTGTGTTGTAATAAAAAAACACCTCTTTTTCTACTAACAAACACTATAATTATGATATCCAAAAAGAAGGCAGACCATTGGAAAGGCCTTTTCAACCTCATAAAACTTCTCTTATCTAATTAAAGCACTCCTTTAAAAGAATACAAAGCCTTGTTTGACAAAAGAGACCCAAAACTGTAAGAGTTTGAATTTCATCTAAATAAGGAAGCAATGGTTAAATAAGCTTTCTTTTCCTTCACTTTTTCAGAAGACTTTTGGAATCCTAAACAAACTCACTGTTCATAAATGTTGAAACCAACCAGGATATTGTCCCTACCAAACCAACGGCTCAGATTGCAAATACCATCTTAAATTTTTTATTAAAGAAACAGTAAACTATGGCAGTTGTTGGGGAATCCCTATCGCTGCATTTCTTTCCTGACTGAAAGGGGAAATGAATATAGATTTATAGGAAGCAAAGCCTTCAGAGAGGTTAATTAAATAAATAAAAACATGAAAGAGAAAAATTTAGTGACGTTAGAGAGATGAAGCACATGGGATCAATCAGTGTCAGCTGAATTCACCAGAAGCATGAACACATGTGGAGGAGAAGATTCAGATTATTAATTAAAATTTGTTTTTTTTTTTCGTTTTGAAAAACTGAGGAACAGGGCAGGGGGAAGAACATGGATCCACCCCATTCCAATGGGGCAGTGCAAAGCTTCCAACTCATAAGACATGTGATGATGCAGCTGAGCATCCTTTCTTTTTCAAACTCACTATTTTCCCTCTAAAGGGGAGTTTTATGCAGTCTCATCATCACCAGATCCCTGTTTTCCATGTTCTCTAGGCTTCATTTTGATGGATCTCTCTCATATTTGCATCAGTTTTTACTGTCTAGATTTATCCATAAACCCACTGTTGGAGAAACAAGAATCTTATATACAATTCCCATAATCAACGTGCATCGTGTTCATCATGTGTGGCTGCTGATTAATCTATTCTTTAATATTGAGCTATTTATGGGACCAAATGATGGCTTGGAATTTGCTTTGATGGGTCCTATTTGGTCTGTGTTTCTTTGTGTCCATCTACATTATGGAATCAATTGAAGATAGAAGAAAGAAGAAATACTGCTACCCAAACAAGCTTTTGGGACTGGATACTCTCTGCTTAATTAGCTATTCATTTTTGCAGTTAGCATAACCCTTTAGCCTTATCCCTTACTCCAACTAACTTCCTCTTTTCATGCATCCATCCATCCCCACAAACCACAATGCCCCACTTCCATTTCTCTCAGCATTCTTATAAACACTACGAAAATACTAATATTTGCTTCGTGTAACAGCTCAAGCTAACCGCTATTAGGTATGGTCTGTTTTAATCCGTTACGTATCGCCGTCAGCCTCATGGTTTTAAAACGCATCTACTAGGAAGAGGTTTCCACACCTTTATAAGGAATGTTTCGTTTTCCTCTCGAACCAATGTGGGATCTCACAATCCATCCTCCTTGGGGGCATAGCGTTTTCGCTGACACATTACCCAGTGTTTGGTTCTTATACCATTTGTAACAACCCAAGCTCACCCTTAGTAGATATTGCCTTTTTTAGCCTGTTACATATCACCGTCAATCTCATAATTTTAAAACGTGTCTACTGGGGAGGTTTCCACACCCTTATAAGGAATCTCATATTATTTCCTTCCCAACCTCAAACCTATTCATCTTCATCATCTCTTCATTAAATGGATGACAAACAAATCATAGTTAAATTGTTTTGAGTCATTGTCAACCTAAGCTCTCCCTAGTGCACTTGTAGGTTCGAAATCTCCCACCCCACGTAGTCGTTAGAAATTCTTAATCATATAACTATTCAAACCCACAAGTGAAATGGTAAATTGTGTCTAGATTAGAATCGACATTTAAAATTTAGAATTTGAATTCGACACATTATTTGGTATCCTTTACACCCTTGCAATATTGACAATTTTCTTGTCTTCATTTACACGTTTTTAAGGAATAGTCACCCAACATAAGATCATGGTAAGTCAAACTCATTTAACTTCAAAATTCTTATAAATCCTATCAGTACAGACACTTCACAGTTAGATACTCCAGCGTTCAAATGCATTACAGAGGTAGGGTGGAAGGAAATAGTATGAACAAATGAGAGTGGGAGAATTTGCATGGAAGTGAAAAAAACTTGGACATCATGAAGAAAGAGAAAGATATTGGACATCATGAAGACGTAAGACCATCTCCATGGCTCATCCTCTCCTCTTAGTGTCTAAAACAAAACTTGAAAGAAAGAGAAAGAGAAAGAGAAAGAGAAAGTGAAAGTGATGATAAAATGAATGATGGGAAATAGGTTCGTCCTGGTGCACGATAGCTGTTGGTGGGTTAGGTAGCAACCCCTGCCCACCCCTCCCTCCGGACCCATCCCCCTAGATTCCTGCCCCCACCGCTCCACCTAAGACTTCCACCCAACTCACTCACTCCCTCTCTCCTCTTTCTTTTCTTTCTTTCCTTCTTCAAACAAAATCAAAAGTAAATAACTTTTTCATTCTTCTTCTTTCCCTTTTCAAATATGTCACCTATACCAAGTTTTCTCCTCTTTTTTTCTCCTTTTCTTTCAAATCTCCCACTTGAATTTTGTTCTCAAGGCTGAGGAGGTGAGAATTGAAGAAAAGGGACGCTTTTGGATGGAGTTGAGTACCTAGTGGCTATGTTCGTAACCATTTAACCTTCCATTTGTGCTTGTTTTCTCTTCATTTCTCACCCTAACGAACTCTCAATCTCCCCTCACTTAAAGGCTTTTAGCAACTAATTAGGAATCAGAAAACTTGAAAAGCACTTTACCCTCTCTTCTTATTTATATGATTGTTAAAAAAAATGTGTTTTTCTTTTTCATACAACTGTCATGCATTGGTAGATAAAGATCTGTGGAAAACGCCATTGGTTCTCTCCAGAAAGATATGAAAAAAGTAACCTTTTAATAACACCTAATCATCAAGATTTGACTCACTCACATAGTCTTTGATATAAACTCATACCTCGTAATTATTGCTTCTAACTTACTCCCCTTCTAATTAATCATCACCCTGTTTTTGTTAGAACTGGAATTACACTTCTGTGAACGTGTTTGATGTTAATTACAGAGCGTACTGATACTAAATATCTGAACTTTATGAAAAATGTTTCCATTACTGCTGCTGTTTCGGTTGATGTTTAAGTTATTATTATCTTTCTTTCTCAATATCCGTACAGGATCTAAGTTTGTAATTAAAGCCACCCCGATTTAAACTTATCCACAGTATTGTATTCCTGCCCTTACAAAGCAAAAATGAAAGAGAATCCTGCAGCTCAATACGAGCTAAGAACTGAGATCACACGTTCTCTTTCTCTCTCTTTCTTTCTCTCTCTACGTATCTATAGAGAGAAGAAATAAGGCAGCCATTGGTAGGAGCTGAGATGGTATATAAACCAATATTTCACATATAAATGCCTCTGATCTCTCTTCTCTCCATTAATTGAAGCAACCCAAGTGACGAACTAAAAAAAAAACAGAAACCCAATTCATTCAATCCCACTTCCATTAATAAGACAAGATTCCGGCCGCAGACGGCGGCGATCGCAGCTCCGGCAGTCATCATGACGAGCAATGGGATGGCTTTTTTTCCAGCAAATTTCATGCTACAAACTTCCCATGAAGATCATGATCATCACCACTCTTCTCCTCCGTCTCTCAACCCAATTCTACCTTCTTGCACACCCCAAGAATTCCATGGTATATTACTCAATGATCTCTCTCAGAATACCATCTTTTTAGTTCTTCACAAGATGAAAAAAAGTCTCATCTTTGAAATGGGTTTTCATTTTTGTTGTTGTTGCAGGTGTTGCATCATTTCTAGGAAAACGATCCATGTCATTTTCAGGAGCAGAAATGGTGGAAGAAGGAAATAACGGTGAGGATGAATTCTCTGATGATGGATCACAGGCAGGTGAGAAAAAGAGGAGACTTAACATGGAGCAAGTCAAAACACTTGAGAAAAACTTCGAACTGGGAAATAAGCTTGAGCCTGAGAGAAAAATGCAGCTGGCTAGAGCTCTTGGTCTACAGCCCAGACAGATAGCTATCTGGTTTCAAAACAGGAGGGCGCGGTGGAAGACTAAGCAGCTAGAGAAAGACTACGATGTTCTTAAAAGACAATTTGAAGCTATGAAATCAGATAATGAAGCCCTCAAATCCCACAACCAAAAACTTCAAGCAGAGGTTAGCTTAATCCCAATCACTTCACTTCATTAATTTCTCTTGTGTGTTGTTCTTGATCTTCAATCCATTTGCTTGATCAGTGAGATTTATGTTTGATATTAATAGCACATGAATAGATTTCTTGTGTTGCCATGCATGTAAGGAATGATTAGTTCTTTAGATTGAAGGCAAAAATATGGTAATGATGAGTCTATAAAGGTGCATATAAATGCAAGAGAGAGAAAGAGAGAAGGAAGTGATTTGGTAATATATGTATTGATTGGTGAATTTGATGAATTTGGGGGACAGATAATGGCACTAAAAAGTAGAGAGCCAACGGAATCAATCAATCTGAACAAAGAAACAGAAGGGTCTTGCAGTAACAGAAGTGAAAACAGCTCTGATAACATCAAATTGGACATCTCAAGAACACCAGCCATTGATAGCCCTCATCAGCATCAGCACCACCCAACAGACAGGCCACTTTTTCCCACCTCCTTAAGGCCTCCAGCTTTGGCTCAGCTCTTTCAAACCTCCTCAAGATCGTCAGACCCACCAAAGCCACTTGATAACAACAATCATCCTCAAATTGCTAAAGAAGAAAGCAGCAGTTTGTCCAACATGTTCTGTGGAATGGATGATCACTCTGGTTTTTGGCCTTGGTTGGAGCAGCAACATTTCAACTGAATCATCATCGAAGTATAATAATGTCATAATATGAATATGTTTAATTTAATTGGATTTTTCTCGAAGAAATATCAAGATTTCTTCCCACCTCCTCCCCCATGAATCTGCAATGTTTTCCTGAGTTTTCTTCTCTTTTCCTTTCAAATCAACTTAAAAGGGTTGTGCTTTTTGGTGTTAGATCATTTGTCATTGTATAAATTAGTGGAATATATATTTTCAGGTGGCGGTTTTTGAGAACCCCTTTTGGAGGAATAATAAAGTTCTTATTTTTCTTGAAG

mRNA sequence

CCATCAAGATCATCCCTCTTCTTCTGACAGCTGCTGCCTTGCTAACATCAGTATAGATTTAGCATAGCAGGTAGCAGCCCACAAGCCTTCTTCTTAAGTTTAGACCATAATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCCCGTTCCTCCTCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGAGAGGTGAGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATTCAATTCGATTGTCTCCTCCGCAAGTTACATTTCAACGGGACAAGAGACGAATCAATTTACTGTCGCAGCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTTTTGTGAGCTTCAACTGTTTGAGTTTGATCATTCTGTTTATGTTCTGTCTACTATTTGGTTTTCAATCAACAATCGTTTCTGGTGATTTGGTTAATGAACATGTTGTAGAGTCCAATATCTGTTCATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGACGGTACTCCTGCTTCGGCTCAAAGAAGTCAGTTTGCTTCCACCACTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACAAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCTGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGACTCTATAGGGAGGCCATATGGATGGATGCATGATTTGGGCGCAGCAAGAATGAAGTCCCGTAAGCAATATCATGATTTTGCCGCCTTGGATGGTTCCTTCCAGCTGCAATTGTCTGAGACTTGCAGCTTGCTCCAGCAGGCAATAGCTTCCTACAAGTTACAGACGGCGGCGATCGCAGCTCCGGCAGTCATCATGACGAGCAATGGGATGGCTTTTTTTCCAGCAAATTTCATGCTACAAACTTCCCATGAAGATCATGATCATCACCACTCTTCTCCTCCGTCTCTCAACCCAATTCTACCTTCTTGCACACCCCAAGAATTCCATGGTGTTGCATCATTTCTAGGAAAACGATCCATGTCATTTTCAGGAGCAGAAATGGTGGAAGAAGGAAATAACGGTGAGGATGAATTCTCTGATGATGGATCACAGGCAGGTGAGAAAAAGAGGAGACTTAACATGGAGCAAGTCAAAACACTTGAGAAAAACTTCGAACTGGGAAATAAGCTTGAGCCTGAGAGAAAAATGCAGCTGGCTAGAGCTCTTGGTCTACAGCCCAGACAGATAGCTATCTGGTTTCAAAACAGGAGGGCGCGGTGGAAGACTAAGCAGCTAGAGAAAGACTACGATGTTCTTAAAAGACAATTTGAAGCTATGAAATCAGATAATGAAGCCCTCAAATCCCACAACCAAAAACTTCAAGCAGAGATAATGGCACTAAAAAGTAGAGAGCCAACGGAATCAATCAATCTGAACAAAGAAACAGAAGGGTCTTGCAGTAACAGAAGTGAAAACAGCTCTGATAACATCAAATTGGACATCTCAAGAACACCAGCCATTGATAGCCCTCATCAGCATCAGCACCACCCAACAGACAGGCCACTTTTTCCCACCTCCTTAAGGCCTCCAGCTTTGGCTCAGCTCTTTCAAACCTCCTCAAGATCGTCAGACCCACCAAAGCCACTTGATAACAACAATCATCCTCAAATTGCTAAAGAAGAAAGCAGCAGTTTGTCCAACATGTTCTGTGGAATGGATGATCACTCTGGTTTTTGGCCTTGGTTGGAGCAGCAACATTTCAACTGAATCATCATCGAAGTATAATAATGTCATAATATGAATATGTTTAATTTAATTGGATTTTTCTCGAAGAAATATCAAGATTTCTTCCCACCTCCTCCCCCATGAATCTGCAATGTTTTCCTGAGTTTTCTTCTCTTTTCCTTTCAAATCAACTTAAAAGGGTTGTGCTTTTTGGTGTTAGATCATTTGTCATTGTATAAATTAGTGGAATATATATTTTCAGGTGGCGGTTTTTGAGAACCCCTTTTGGAGGAATAATAAAGTTCTTATTTTTCTTGAAG

Coding sequence (CDS)

ATGTCGTCCAGAAGCTCGCGTTCTAGGCGCTCATCTGTGCCTTCTAGCAACATTTCTGATGAACAAATTGCTGATTTGATCTCCAAGTTACAGCAACTCATCCCTGAGATTCGCAATGCCCGTTCCTCCTCCAGGGTATCAGCTTCAAAGGTTCTTCAAGAGACCTGCAACTACATAAGAAGCTTACAAAGAGAGGTGAGCGACTTAAGCGACCGATTATCAGAGCTGTTGCTATCAACTGACCCTGAAAGTGCTCAGGCTGCCATTATTAGAAGCTTACTCATTCAATTCGATTGTCTCCTCCGCAAGTTACATTTCAACGGGACAAGAGACGAATCAATTTACTGTCGCAGCGAAAACATGAATCCTGGTGGGTATACGGTTGAAGTGACGGGCTTGTCTCCTAAAGCAACGGAGAAGGATATCCTCGATTTCTTCGCTTTCTCTGGCGCAATCGAGCTCGTTGAGATTGTGAGGTCTGGTGAAGATGCCTGCACTGCATATGTGTCATTCAAAGATGCTTACTCTCAAGAGACTGCTTGCCTGCTGAGTTTTGTGAGCTTCAACTGTTTGAGTTTGATCATTCTGTTTATGTTCTGTCTACTATTTGGTTTTCAATCAACAATCGTTTCTGGTGATTTGGTTAATGAACATGTTGTAGAGTCCAATATCTGTTCATTGCAGGGTGCAACAATTGTAGATCAACGAGTGTGCATAACACGGTGGGGACATTTTGATGAAGAATTTGATTTCTGGAGCAGGCCTTCCGGTTACCATGAAGAAGACGGTACTCCTGCTTCGGCTCAAAGAAGTCAGTTTGCTTCCACCACTGGAACCGCAGTGTCCATGGCCCAGGACGTAGTCAAAACCATGCTGGCCATGGGTTACGTGCTGGGCAAAGATACATTTACAAAAGCCAAAGCATTTGATGAATCTCATCAGGTCTCAGCAACCGCAGCAGCTAAGGTAGCTGATTTGAGTAACAGAATTGGCCTTACTGACATGATTGGTGCAGGGTATGAAGCGGCTAAAACCATGGATGAGAAGTACCACGTATTGCAGACAACCAAATCTGCTATATCAGCCACTGGAAGAACAGCTGCTGCTGCTGCTGATACGGTGGTCAGGAGTAGCTACTTCTCCAGGGGAGCTCTTTTCATTTCTGATGCCCTGAATCGAGCTGCCAAAGCTGCAGCTGACTTGGACTCTATAGGGAGGCCATATGGATGGATGCATGATTTGGGCGCAGCAAGAATGAAGTCCCGTAAGCAATATCATGATTTTGCCGCCTTGGATGGTTCCTTCCAGCTGCAATTGTCTGAGACTTGCAGCTTGCTCCAGCAGGCAATAGCTTCCTACAAGTTACAGACGGCGGCGATCGCAGCTCCGGCAGTCATCATGACGAGCAATGGGATGGCTTTTTTTCCAGCAAATTTCATGCTACAAACTTCCCATGAAGATCATGATCATCACCACTCTTCTCCTCCGTCTCTCAACCCAATTCTACCTTCTTGCACACCCCAAGAATTCCATGGTGTTGCATCATTTCTAGGAAAACGATCCATGTCATTTTCAGGAGCAGAAATGGTGGAAGAAGGAAATAACGGTGAGGATGAATTCTCTGATGATGGATCACAGGCAGGTGAGAAAAAGAGGAGACTTAACATGGAGCAAGTCAAAACACTTGAGAAAAACTTCGAACTGGGAAATAAGCTTGAGCCTGAGAGAAAAATGCAGCTGGCTAGAGCTCTTGGTCTACAGCCCAGACAGATAGCTATCTGGTTTCAAAACAGGAGGGCGCGGTGGAAGACTAAGCAGCTAGAGAAAGACTACGATGTTCTTAAAAGACAATTTGAAGCTATGAAATCAGATAATGAAGCCCTCAAATCCCACAACCAAAAACTTCAAGCAGAGATAATGGCACTAAAAAGTAGAGAGCCAACGGAATCAATCAATCTGAACAAAGAAACAGAAGGGTCTTGCAGTAACAGAAGTGAAAACAGCTCTGATAACATCAAATTGGACATCTCAAGAACACCAGCCATTGATAGCCCTCATCAGCATCAGCACCACCCAACAGACAGGCCACTTTTTCCCACCTCCTTAAGGCCTCCAGCTTTGGCTCAGCTCTTTCAAACCTCCTCAAGATCGTCAGACCCACCAAAGCCACTTGATAACAACAATCATCCTCAAATTGCTAAAGAAGAAAGCAGCAGTTTGTCCAACATGTTCTGTGGAATGGATGATCACTCTGGTTTTTGGCCTTGGTTGGAGCAGCAACATTTCAACTGA

Protein sequence

MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIRSLQREVSDLSDRLSELLLSTDPESAQAAIIRSLLIQFDCLLRKLHFNGTRDESIYCRSENMNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLSFVSFNCLSLIILFMFCLLFGFQSTIVSGDLVNEHVVESNICSLQGATIVDQRVCITRWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMAQDVVKTMLAMGYVLGKDTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLDSIGRPYGWMHDLGAARMKSRKQYHDFAALDGSFQLQLSETCSLLQQAIASYKLQTAAIAAPAVIMTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSGAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSREPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN

Homology

[Close]

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot
Match: Q8LC03 (Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-13 PE=2 SV=2)

HSP 1 Score: 356.3 bits (913), Expect = 8.6e-97
Identity = 195/298 (65.44%), Postives = 232/298 (77.85%), Query Frame = 0


Query: 469 SNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCT-PQEFHGVASFLGKRSMSFSGA 528
           +NGM+FFP+NFM+QTS+ED DH H S PSL P+LPSC+ PQ+ HG ASFLGKRS    G 
Sbjct: 4   NNGMSFFPSNFMIQTSYED-DHPHQS-PSLAPLLPSCSLPQDLHGFASFLGKRS-PMEGC 63

Query: 529 EMVEEGN--NGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 588
             +E GN  NGE+++SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG
Sbjct: 64  CDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 123

Query: 589 LQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSR 648
           LQPRQIAIWFQNRRARWKTKQLEKDYD LKRQF+ +K++N+ L++HNQKLQAEIM LK+R
Sbjct: 124 LQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR 183

Query: 649 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPP 708
           E TESINLNKETEGSCSNRS+NSSDN++LDIS  P  +       HP           PP
Sbjct: 184 EQTESINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPP 243

Query: 709 ALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           + A    T++ ++   +   N++  Q   +E +S+SNMFC MDDHSGFWPWL+QQ +N
Sbjct: 244 SPA----TATTTTTTMQFFQNSSSGQSMVKEENSISNMFCAMDDHSGFWPWLDQQQYN 294

[Close]

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot
Match: A2XD08 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=HOX21 PE=2 SV=2)

HSP 1 Score: 291.2 bits (744), Expect = 3.4e-77
Identity = 186/361 (51.52%), Postives = 220/361 (60.94%), Query Frame = 0


Query: 467 MTSNGMA-----FFPANFMLQTS---------------HEDHDHHHSS------------ 526
           M SNGMA     FFP NF+L  +               H  H HHH              
Sbjct: 1   MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHHEQQQHHHHLGPPPP 60

Query: 527 --PPSLNPILPSCTP----QEFHGVASFLGKRSMSF--SGAEMVEEGNNGEDEFSDDGSQ 586
             P   NP LPS       QEF G+A  LGKR MS+   G    E    GEDE SDDGSQ
Sbjct: 61  PPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDELSDDGSQ 120

Query: 587 AGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQ 646
           AGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRARWKTKQ
Sbjct: 121 AGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRARWKTKQ 180

Query: 647 LEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE-PTESINLNKETEGSCSNRS 706
           LEKDYD LKRQ +A+K++N+AL +HN+KLQAEI+ALK RE  +E INLNKETE SCSNRS
Sbjct: 181 LEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNKETEASCSNRS 240

Query: 707 ENSSDNIKLDISRTPAID------SPHQHQHHPTDR----------PLFPTSLRPPA--- 764
           ENSS+ I LDISRTP  D      +P  H HH              P + +  RP +   
Sbjct: 241 ENSSE-INLDISRTPPPDAAALDAAPTAHHHHHGGGGGGGGGGGMIPFYTSIARPASGGG 300

[Close]

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot
Match: Q8S7W9 (Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX21 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 2.2e-76
Identity = 188/367 (51.23%), Postives = 221/367 (60.22%), Query Frame = 0


Query: 467 MTSNGMA-----FFPANFML-------------QTSHEDH----------------DHHH 526
           M SNGMA     FFP NF+L             Q  H  H                 HHH
Sbjct: 1   MASNGMASSPSSFFPPNFLLHMAQQQAAPPHDPQEHHHHHHHGHHGHHHEQQQQQQHHHH 60

Query: 527 SSPP------SLNPILPSCTP----QEFHGVASFLGKRSMSF--SGAEMVEEGNNGEDEF 586
             PP        NP LPS       QEF G+A  LGKR MS+   G    E    GEDE 
Sbjct: 61  LGPPPPPPPHPHNPFLPSSAQCPSLQEFRGMAPMLGKRPMSYGDGGGGGDEVNGGGEDEL 120

Query: 587 SDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRA 646
           SDDGSQAGEKKRRLN+EQV+TLEKNFELGNKLEPERKMQLARALGLQPRQ+AIWFQNRRA
Sbjct: 121 SDDGSQAGEKKRRLNVEQVRTLEKNFELGNKLEPERKMQLARALGLQPRQVAIWFQNRRA 180

Query: 647 RWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE-PTESINLNKETEG 706
           RWKTKQLEKDYD LKRQ +A+K++N+AL +HN+KLQAEI+ALK RE  +E INLNKETE 
Sbjct: 181 RWKTKQLEKDYDALKRQLDAVKAENDALLNHNKKLQAEIVALKGREAASELINLNKETEA 240

Query: 707 SCSNRSENSSDNIKLDISRTPAID------SPHQHQHHPTDR----------PLFPTSLR 764
           SCSNRSENSS+ I LDISRTP  D      +P  H HH              P + +  R
Sbjct: 241 SCSNRSENSSE-INLDISRTPPPDAAALDTAPTAHHHHHGGGGGGGGGGGMIPFYTSIAR 300

[Close]

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot
Match: Q8LFD3 (Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana OX=3702 GN=ATHB-23 PE=2 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.2e-75
Identity = 167/295 (56.61%), Postives = 203/295 (68.81%), Query Frame = 0


Query: 469 SNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSGAE 528
           +NG+AFFP NF LQ  H++ + H    P L         Q+FHG   FLGKRS   +   
Sbjct: 5   NNGLAFFPENFSLQNHHQEEEDH----PQL--------LQDFHG---FLGKRSPMNNVQG 64

Query: 529 MVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 588
                 NG++E+SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK++LARALGLQP
Sbjct: 65  FCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQP 124

Query: 589 RQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSREPT 648
           RQIAIWFQNRRAR KTKQLEKDYD+LKRQFE+++ +NE L++ NQKLQA++MALKSREP 
Sbjct: 125 RQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPI 184

Query: 649 ESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPALA 708
           ESINLNKETEGSCS+RSEN S +I     R P IDS     H PT   +           
Sbjct: 185 ESINLNKETEGSCSDRSENISGDI-----RPPEIDSQFALGHPPTTTTM----------- 244

Query: 709 QLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           Q FQ SS            +  ++ KEE +S+SNMFCG+DD SGFWPWL+QQ +N
Sbjct: 245 QFFQNSS------------SEQRMVKEE-NSISNMFCGIDDQSGFWPWLDQQQYN 255

[Close]

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot
Match: Q8LAT0 (Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana OX=3702 GN=ATHB-20 PE=1 SV=2)

HSP 1 Score: 212.6 bits (540), Expect = 1.5e-53
Identity = 139/296 (46.96%), Postives = 183/296 (61.82%), Query Frame = 0


Query: 472 MAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSGAEMVE 531
           MAF    FM Q  HED+             LPSC P  F+G  +++  RSMS    +   
Sbjct: 16  MAFPQHGFMFQQLHEDNSQDQ---------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDH 75

Query: 532 EGNNGEDEFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPR 591
                E+  SDDG+    GEKK+RL +EQVK LEK+FELGNKLEPERK+QLA+ALG+QPR
Sbjct: 76  NQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPR 135

Query: 592 QIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSREPTE 651
           QIAIWFQNRRARWKT+QLE+DYD LK+QFE++KSDN +L ++N+KL AE+MALK++E  E
Sbjct: 136 QIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNE 195

Query: 652 SINLNKETEGSCSNR--SENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPAL 711
              + +E E S SN   +ENSSD I L++ R           H  T + LFP+S+R    
Sbjct: 196 GNIVKREAEASWSNNGSTENSSD-INLEMPRETIT------THVNTIKDLFPSSIR---- 255

Query: 712 AQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDD--HSGFWPWLEQQH 762
                 SS   D     D++ + +I +EE  SL NMF G+D+   +G+W W +  H
Sbjct: 256 ------SSAHDD-----DHHQNHEIVQEE--SLCNMFNGIDETTPAGYWAWSDPNH 278

[Close]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL
Match: A0A6J1HWV0 (homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita maxima OX=3661 GN=LOC111467574 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 1.5e-165
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 240

Query: 707 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN
Sbjct: 241 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 297

[Close]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL
Match: A0A6J1G209 (homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita moschata OX=3662 GN=LOC111449953 PE=4 SV=1)

HSP 1 Score: 591.3 bits (1523), Expect = 5.9e-165
Identity = 296/297 (99.66%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPT+RPLFPTSLRPPA
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTNRPLFPTSLRPPA 240

Query: 707 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN
Sbjct: 241 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 297

[Close]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL
Match: A0A6J1KW98 (homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita maxima OX=3661 GN=LOC111499246 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 4.4e-152
Identity = 284/303 (93.73%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHD-HHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFS 526
           MTSNGMAFFPANFMLQTSHEDHD HHHSSPPSLNPILPSCT Q+FHGVASFLGKRSMSFS
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHHSSPPSLNPILPSCTSQDFHGVASFLGKRSMSFS 60

Query: 527 GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 586
           GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG
Sbjct: 61  GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120

Query: 587 LQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSR 646
           LQPRQIAIWFQNRRARWKTKQLEKDYD+LKRQFEA+KSDNEALKS NQKLQAEIM LKSR
Sbjct: 121 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSQNQKLQAEIMGLKSR 180

Query: 647 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQH-HPTDRPLFPT-SLR 706
           EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQH HPT+RPLFPT SLR
Sbjct: 181 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHQHPTNRPLFPTSSLR 240

Query: 707 PPALAQLFQTSSRSSDPPKPLDNNN---HPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ 764
           PPALAQLFQTSSRSSDPPK LDNNN   H Q+ KEE++SLSNMFCGMDDHSGFWPWLEQQ
Sbjct: 241 PPALAQLFQTSSRSSDPPKQLDNNNHHHHHQMPKEENTSLSNMFCGMDDHSGFWPWLEQQ 300

[Close]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL
Match: A0A6J1H259 (homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita moschata OX=3662 GN=LOC111458890 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 4.4e-152
Identity = 284/303 (93.73%), Postives = 291/303 (96.04%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHD-HHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFS 526
           MTSNGMAFFPANFMLQTSHEDHD HHHSSPPSLNPILPSCT Q+FHGVASFLGKRSMSFS
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHHSSPPSLNPILPSCTSQDFHGVASFLGKRSMSFS 60

Query: 527 GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 586
           GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG
Sbjct: 61  GAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 120

Query: 587 LQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSR 646
           LQPRQIAIWFQNRRARWKTKQLEKDYD+LKRQFEA+KSDNEALKS NQKLQAEIM LKSR
Sbjct: 121 LQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSQNQKLQAEIMGLKSR 180

Query: 647 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQH-HPTDRPLFPT-SLR 706
           EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQH HPT+RPLFPT SLR
Sbjct: 181 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHQHPTNRPLFPTSSLR 240

Query: 707 PPALAQLFQTSSRSSDPPKPLDNNN---HPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ 764
           PPALAQLFQTSSRSSDPPK LDNNN   H Q+ KEE++SLSNMFCGMDDHSGFWPWLEQQ
Sbjct: 241 PPALAQLFQTSSRSSDPPKQLDNNNHHHHHQMPKEENTSLSNMFCGMDDHSGFWPWLEQQ 300

[Close]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL
Match: A0A6J1DBM0 (homeobox-leucine zipper protein ATHB-13 OS=Momordica charantia OX=3673 GN=LOC111019202 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 4.5e-149
Identity = 281/303 (92.74%), Postives = 289/303 (95.38%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQ+FHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQDFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYD+LKRQFEA+KSDNEALKS NQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKSDNEALKSQNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQ---HHPTDRPLFP-TSL 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQ   H PT+RPLFP +SL
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHQHHQPTNRPLFPSSSL 240

Query: 707 RPPALAQLFQTSSRSSDPPKPLD--NNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ 764
           RPPALAQLFQTSSR SDP K  +  N+NH Q+ KEESSSLSNMFCGMDDHSGFWPWLEQQ
Sbjct: 241 RPPALAQLFQTSSR-SDPTKLENHHNHNHNQMPKEESSSLSNMFCGMDDHSGFWPWLEQQ 300

[Close]

BLAST of CmaCh18G011640 vs. NCBI nr
Match: KAG7013156.1 (Homeobox-leucine zipper protein ATHB-13, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 600.5 bits (1547), Expect = 2.0e-167
Identity = 302/303 (99.67%), Postives = 303/303 (100.00%), Query Frame = 0


Query: 461 AAPAVIMTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKR 520
           AAPAVIMTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKR
Sbjct: 1   AAPAVIMTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKR 60

Query: 521 SMSFSGAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQL 580
           SMSFSGAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQL
Sbjct: 61  SMSFSGAEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQL 120

Query: 581 ARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIM 640
           ARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIM
Sbjct: 121 ARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIM 180

Query: 641 ALKSREPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPT 700
           ALKSREPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPT+RPLFPT
Sbjct: 181 ALKSREPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTNRPLFPT 240

Query: 701 SLRPPALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ 760
           SLRPPALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ
Sbjct: 241 SLRPPALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQ 300

Query: 761 HFN 764
           HFN
Sbjct: 301 HFN 303

[Close]

BLAST of CmaCh18G011640 vs. NCBI nr
Match: XP_022968305.1 (homeobox-leucine zipper protein ATHB-13-like [Cucurbita maxima])

HSP 1 Score: 593.2 bits (1528), Expect = 3.2e-165
Identity = 297/297 (100.00%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 240

Query: 707 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN
Sbjct: 241 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 297

[Close]

BLAST of CmaCh18G011640 vs. NCBI nr
Match: XP_022945824.1 (homeobox-leucine zipper protein ATHB-13-like [Cucurbita moschata])

HSP 1 Score: 591.3 bits (1523), Expect = 1.2e-164
Identity = 296/297 (99.66%), Postives = 297/297 (100.00%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPT+RPLFPTSLRPPA
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTNRPLFPTSLRPPA 240

Query: 707 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN
Sbjct: 241 LAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 297

[Close]

BLAST of CmaCh18G011640 vs. NCBI nr
Match: XP_023541310.1 (homeobox-leucine zipper protein ATHB-13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 586.6 bits (1511), Expect = 3.0e-163
Identity = 296/298 (99.33%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 467 MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 526
           MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG
Sbjct: 1   MTSNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSG 60

Query: 527 AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 586
           AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL
Sbjct: 61  AEMVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGL 120

Query: 587 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 646
           QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE
Sbjct: 121 QPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSRE 180

Query: 647 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPA 706
           PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPT+RPLFPTSLRPPA
Sbjct: 181 PTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTNRPLFPTSLRPPA 240

Query: 707 LAQLFQTSSRSSDPPK-PLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           LAQLFQTSSRSSDPPK PLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN
Sbjct: 241 LAQLFQTSSRSSDPPKPPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 298

[Close]

BLAST of CmaCh18G011640 vs. NCBI nr
Match: KAG6574098.1 (Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 583.9 bits (1504), Expect = 1.9e-162
Identity = 331/405 (81.73%), Postives = 332/405 (81.98%), Query Frame = 0


Query: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60
           MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR
Sbjct: 1   MSSRSSRSRRSSVPSSNISDEQIADLISKLQQLIPEIRNARSSSRVSASKVLQETCNYIR 60

Query: 61  SLQREVSDLSDRLSELLLSTDPESAQAAIIRSLLIQFDCLLRKLHFNGTRDESIYCRSEN 120
           SLQREV DLSDRLSELLLSTDPESAQAAIIRSLLI                       EN
Sbjct: 61  SLQREVGDLSDRLSELLLSTDPESAQAAIIRSLLI-----------------------EN 120

Query: 121 MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 180
           MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA
Sbjct: 121 MNPGGYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETA 180

Query: 181 CLLSFVSFNCLSLIILFMFCLLFGFQSTIVSGDLVNEHVVESNICSLQGATIVDQRVCIT 240
           CLLS                                            GATIVDQRVCIT
Sbjct: 181 CLLS--------------------------------------------GATIVDQRVCIT 240

Query: 241 RWGHFDEEFDFWSRPSGYHEEDGTPASAQRSQFASTTGTAVSMAQDVVKTMLAMGYVLGK 300
           RWGHFDEEFDFWSRPSGYHEEDGTP SAQRSQF ST GTAVSMAQDVVKTMLAMGYVLGK
Sbjct: 241 RWGHFDEEFDFWSRPSGYHEEDGTPPSAQRSQFVSTAGTAVSMAQDVVKTMLAMGYVLGK 300

Query: 301 DTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAI 360
           DTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAI
Sbjct: 301 DTFTKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAI 338

Query: 361 SATGRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLDSIG 406
           SATGRTAAAAADTVVRSSYFSRGALF+SDALNRAAKAAADL S G
Sbjct: 361 SATGRTAAAAADTVVRSSYFSRGALFMSDALNRAAKAAADLGSRG 338

[Close]

BLAST of CmaCh18G011640 vs. TAIR 10
Match: AT1G69780.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 356.3 bits (913), Expect = 6.1e-98
Identity = 195/298 (65.44%), Postives = 232/298 (77.85%), Query Frame = 0


Query: 469 SNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCT-PQEFHGVASFLGKRSMSFSGA 528
           +NGM+FFP+NFM+QTS+ED DH H S PSL P+LPSC+ PQ+ HG ASFLGKRS    G 
Sbjct: 4   NNGMSFFPSNFMIQTSYED-DHPHQS-PSLAPLLPSCSLPQDLHGFASFLGKRS-PMEGC 63

Query: 529 EMVEEGN--NGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 588
             +E GN  NGE+++SDDGSQ GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG
Sbjct: 64  CDLETGNNMNGEEDYSDDGSQMGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALG 123

Query: 589 LQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSR 648
           LQPRQIAIWFQNRRARWKTKQLEKDYD LKRQF+ +K++N+ L++HNQKLQAEIM LK+R
Sbjct: 124 LQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKLQAEIMGLKNR 183

Query: 649 EPTESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPP 708
           E TESINLNKETEGSCSNRS+NSSDN++LDIS  P  +       HP           PP
Sbjct: 184 EQTESINLNKETEGSCSNRSDNSSDNLRLDISTAPPSNDSTLTGGHPPPPQTVGRHFFPP 243

Query: 709 ALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           + A    T++ ++   +   N++  Q   +E +S+SNMFC MDDHSGFWPWL+QQ +N
Sbjct: 244 SPA----TATTTTTTMQFFQNSSSGQSMVKEENSISNMFCAMDDHSGFWPWLDQQQYN 294

[Close]

BLAST of CmaCh18G011640 vs. TAIR 10
Match: AT1G26960.1 (homeobox protein 23 )

HSP 1 Score: 284.3 bits (726), Expect = 3.0e-76
Identity = 167/295 (56.61%), Postives = 203/295 (68.81%), Query Frame = 0


Query: 469 SNGMAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSGAE 528
           +NG+AFFP NF LQ  H++ + H    P L         Q+FHG   FLGKRS   +   
Sbjct: 5   NNGLAFFPENFSLQNHHQEEEDH----PQL--------LQDFHG---FLGKRSPMNNVQG 64

Query: 529 MVEEGNNGEDEFSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQP 588
                 NG++E+SDDGS+ GEKKRRLNMEQ+K LEK+FELGNKLE +RK++LARALGLQP
Sbjct: 65  FCNLDMNGDEEYSDDGSKMGEKKRRLNMEQLKALEKDFELGNKLESDRKLELARALGLQP 124

Query: 589 RQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSREPT 648
           RQIAIWFQNRRAR KTKQLEKDYD+LKRQFE+++ +NE L++ NQKLQA++MALKSREP 
Sbjct: 125 RQIAIWFQNRRARSKTKQLEKDYDMLKRQFESLRDENEVLQTQNQKLQAQVMALKSREPI 184

Query: 649 ESINLNKETEGSCSNRSENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPALA 708
           ESINLNKETEGSCS+RSEN S +I     R P IDS     H PT   +           
Sbjct: 185 ESINLNKETEGSCSDRSENISGDI-----RPPEIDSQFALGHPPTTTTM----------- 244

Query: 709 QLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDDHSGFWPWLEQQHFN 764
           Q FQ SS            +  ++ KEE +S+SNMFCG+DD SGFWPWL+QQ +N
Sbjct: 245 QFFQNSS------------SEQRMVKEE-NSISNMFCGIDDQSGFWPWLDQQQYN 255

[Close]

BLAST of CmaCh18G011640 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-70
Identity = 153/282 (54.26%), Postives = 182/282 (64.54%), Query Frame = 0


Query: 125 GYTVEVTGLSPKATEKDILDFFAFSGAIELVEIVRSGEDACTAYVSFKDAYSQETACLLS 184
           GY VEVTGLSP  T  D++DFF+FSG I+ ++IVRSGE ACTAYV FKD+YSQETA LL+
Sbjct: 6   GYGVEVTGLSPSVTHNDLIDFFSFSGTIQDIDIVRSGEQACTAYVMFKDSYSQETAVLLT 65

Query: 185 FVSFNCLSLIILFMFCLLFGFQSTIVSGDLVNEHVVESNICSLQGATIVDQRVCITRWGH 244
                                                       GATI+DQRVCITRWG 
Sbjct: 66  --------------------------------------------GATILDQRVCITRWGQ 125

Query: 245 FDEEFDFWSRPS-GYHEEDGTPASAQRSQFASTTGTAVSMAQDVVKTMLAMGYVLGKDTF 304
             EEFDFW+  S G+ +E  +   AQRS+F    G AV+ AQ+VVK MLA G+VLGKD  
Sbjct: 126 HHEEFDFWNATSRGFEDESDSQHYAQRSEF--NAGEAVTKAQEVVKIMLATGFVLGKDAL 185

Query: 305 TKAKAFDESHQVSATAAAKVADLSNRIGLTDMIGAGYEAAKTMDEKYHVLQTTKSAISAT 364
           +KAKAFDESH VSA A A+V+ L  RIGLTD I  G EA +  D++YHV  T KSA+ AT
Sbjct: 186 SKAKAFDESHGVSAAAVARVSQLEQRIGLTDKIFTGLEAVRMTDQRYHVSDTAKSAVFAT 241

Query: 365 GRTAAAAADTVVRSSYFSRGALFISDALNRAAKAAADLDSIG 406
           GRTAAAAA +VV SSYFS GAL++S AL RAAKAA+DL + G
Sbjct: 246 GRTAAAAATSVVNSSYFSSGALWLSGALERAAKAASDLGTRG 241

[Close]

BLAST of CmaCh18G011640 vs. TAIR 10
Match: AT3G01220.1 (homeobox protein 20 )

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-54
Identity = 139/296 (46.96%), Postives = 183/296 (61.82%), Query Frame = 0


Query: 472 MAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFHGVASFLGKRSMSFSGAEMVE 531
           MAF    FM Q  HED+             LPSC P  F+G  +++  RSMS    +   
Sbjct: 16  MAFPQHGFMFQQLHEDNSQDQ---------LPSCPPHLFNGGGNYMMNRSMSLMNVQEDH 75

Query: 532 EGNNGEDEFSDDGSQA--GEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPR 591
                E+  SDDG+    GEKK+RL +EQVK LEK+FELGNKLEPERK+QLA+ALG+QPR
Sbjct: 76  NQTLDEENLSDDGAHTMLGEKKKRLQLEQVKALEKSFELGNKLEPERKIQLAKALGMQPR 135

Query: 592 QIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHNQKLQAEIMALKSREPTE 651
           QIAIWFQNRRARWKT+QLE+DYD LK+QFE++KSDN +L ++N+KL AE+MALK++E  E
Sbjct: 136 QIAIWFQNRRARWKTRQLERDYDSLKKQFESLKSDNASLLAYNKKLLAEVMALKNKECNE 195

Query: 652 SINLNKETEGSCSNR--SENSSDNIKLDISRTPAIDSPHQHQHHPTDRPLFPTSLRPPAL 711
              + +E E S SN   +ENSSD I L++ R           H  T + LFP+S+R    
Sbjct: 196 GNIVKREAEASWSNNGSTENSSD-INLEMPRETIT------THVNTIKDLFPSSIR---- 255

Query: 712 AQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDD--HSGFWPWLEQQH 762
                 SS   D     D++ + +I +EE  SL NMF G+D+   +G+W W +  H
Sbjct: 256 ------SSAHDD-----DHHQNHEIVQEE--SLCNMFNGIDETTPAGYWAWSDPNH 278

[Close]

BLAST of CmaCh18G011640 vs. TAIR 10
Match: AT5G15150.1 (homeobox 3 )

HSP 1 Score: 212.6 bits (540), Expect = 1.1e-54
Identity = 144/318 (45.28%), Postives = 190/318 (59.75%), Query Frame = 0


Query: 472 MAFFPANFMLQTSHEDHDHHHSSPPSLNPILPSCTPQEFH-GVASFLGKRSMSFSGA--- 531
           MAF    FM Q  HED+ HH  SP S    LPSC P  F+ G  +++  RSMSF+G    
Sbjct: 22  MAFPQHGFMFQQLHEDNAHHLPSPTS----LPSCPPHLFYGGGGNYMMNRSMSFTGVSDH 81

Query: 532 ------------EMVEEGNNG-EDEFSDDGS--QAGEKKRRLNMEQVKTLEKNFELGNKL 591
                        M ++   G ED  SDDGS    GEKK+RLN+EQV+ LEK+FELGNKL
Sbjct: 82  HHLTQKSPTTTNNMNDQDQVGEEDNLSDDGSHMMLGEKKKRLNLEQVRALEKSFELGNKL 141

Query: 592 EPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDVLKRQFEAMKSDNEALKSHN 651
           EPERKMQLA+ALGLQPRQIAIWFQNRRARWKTKQLE+DYD LK+QF+ +KSDN++L +HN
Sbjct: 142 EPERKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHN 201

Query: 652 QKLQAEIMALKSREPTESINLNKE-TEGSCSNR--SENSSDNIKLDISRTPAIDSPHQHQ 711
           +KL AE++ALK  +  ES  + +E  E S SN   +EN+ +N   D +    I       
Sbjct: 202 KKLHAELVALKKHDRKESAKIKREFAEASWSNNGSTENNHNNNSSDANHVSMI------- 261

Query: 712 HHPTDRPLFPTSLRPPALAQLFQTSSRSSDPPKPLDNNNHPQIAKEESSSLSNMFCGMDD 764
                + LFP+S+R          S+ ++     +D+    QI +++     NMF G+D+
Sbjct: 262 -----KDLFPSSIR----------SATATTTSTHIDH----QIVQDQDQGFCNMFNGIDE 309

The following BLAST results are available for this feature:

BLAST of CmaCh18G011640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LC03	8.6e-97	65.44	Homeobox-leucine zipper protein ATHB-13 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
A2XD08	3.4e-77	51.52	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q8S7W9	2.2e-76	51.23	Homeobox-leucine zipper protein HOX21 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
Q8LFD3	4.2e-75	56.61	Homeobox-leucine zipper protein ATHB-23 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]
Q8LAT0	1.5e-53	46.96	Homeobox-leucine zipper protein ATHB-20 OS=Arabidopsis thaliana OX=3702 GN=ATHB-...	[more]

BLAST of CmaCh18G011640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HWV0	1.5e-165	100.00	homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1G209	5.9e-165	99.66	homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1KW98	4.4e-152	93.73	homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1H259	4.4e-152	93.73	homeobox-leucine zipper protein ATHB-13-like OS=Cucurbita moschata OX=3662 GN=LO...	[more]
A0A6J1DBM0	4.5e-149	92.74	homeobox-leucine zipper protein ATHB-13 OS=Momordica charantia OX=3673 GN=LOC111...	[more]

BLAST of CmaCh18G011640 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013156.1	2.0e-167	99.67	Homeobox-leucine zipper protein ATHB-13, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022968305.1	3.2e-165	100.00	homeobox-leucine zipper protein ATHB-13-like [Cucurbita maxima]	[more]
XP_022945824.1	1.2e-164	99.66	homeobox-leucine zipper protein ATHB-13-like [Cucurbita moschata]	[more]
XP_023541310.1	3.0e-163	99.33	homeobox-leucine zipper protein ATHB-13-like [Cucurbita pepo subsp. pepo]	[more]
KAG6574098.1	1.9e-162	81.73	Binding partner of ACD11 1, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CmaCh18G011640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G69780.1	6.1e-98	65.44	Homeobox-leucine zipper protein family	[more]
AT1G26960.1	3.0e-76	56.61	homeobox protein 23	[more]
AT1G14340.1	1.9e-70	54.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G01220.1	1.1e-54	46.96	homeobox protein 20	[more]
AT5G15150.1	1.1e-54	45.28	homeobox 3	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 59..79
None	No IPR available	COILS	Coil	Coil	coord: 597..645
None	No IPR available	GENE3D	1.10.10.60		coord: 542..611 e-value: 1.3E-18 score: 68.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 706..738
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 653..675
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 646..738
None	No IPR available	PANTHER	PTHR24326:SF176	HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13	coord: 470..763
None	No IPR available	PANTHER	PTHR24326	HOMEOBOX-LEUCINE ZIPPER PROTEIN	coord: 470..763
IPR000047	Helix-turn-helix motif	PRINTS	PR00031	HTHREPRESSR	coord: 576..585 score: 46.99 coord: 585..601 score: 58.02
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 548..609 e-value: 1.8E-17 score: 74.1
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 550..603 e-value: 1.1E-14 score: 54.0
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 545..605 score: 17.329395
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 550..606 e-value: 6.73443E-17 score: 73.4316
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 605..645 e-value: 2.0E-17 score: 63.1
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 110..189 e-value: 2.9E-6 score: 29.2
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 7..88 e-value: 3.6E-7 score: 32.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 21..81
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 22..63 e-value: 2.6E-5 score: 24.2
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 7..62 score: 10.435723
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 580..603
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 124..182
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 540..607

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G011640.1	CmaCh18G011640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003676	nucleic acid binding