CmaCh18G011320 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G011320
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	50S ribosomal protein L32, chloroplastic
Location	Cma_Chr18: 9185278 .. 9187894 (-)
RNA-Seq Expression	CmaCh18G011320
Synteny	CmaCh18G011320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCTACATATATTGTCATATTTGGATTTTTCTTTTTAGGTTCACGTTTTTAAAACGAGTCTACTTTGAAAGAGGTTTCCACACTATTACAAAGAATGTTTTGTTACCCTCTCCACTCAACGTAGGATCGCACAACAGATCAATCAACACCGACGTCTATAAATTGGTATTGATGATAACTTATTATTCAATTATTTTTGCTTCAAATTAATAAATATAAAAATCTATATTTTCGTGCTTTTGGGCCGAGCTTAGGGATCCAAGCCTGTTACCGGCCCATTGGCCCTGGACTCGTTAAAACGACGCCGTCGATTTGTATTGTGGCATTTCCAAATTCCTAAAACCCCGTCGTCATCTTAGGCCGATTTGCACCGCCGGTATACTGAAAGCAGCACTGCCACTTGCTCGCAGCTATGGCGTTGAGGATTTTGAGGGCGGTAGAGGGTCAGACGGGTTCGATGTTTGGGTTGAAGGCGATGGCTAAGGTTTTACCCCATTCTTCGCCGATATCTGGGATCATGGACCATAAGGATTCCGCGCCGCCGCTTGTTCTGCCGGAGTTTAACCATGAATCTGATAGGGACGGGATCAACAACTGCAGTATTGTGGGGTTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCGATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTATTGAATTTCCTCCTATTTTCAAATAATCATACGCTGAGAAGATCCTATTCTTAGAGTAGAAACTTAATCTATATGTTACTTATGGAAGAAGTTTAAACTTAAAATTTCACATGGAAGTTGTGGGATATGTAAGATGTCATTGAAAGTATTAGATATGAACTTGTAGCGTCCGAAGATTTTAGGGAGCATTTCCATTTGTACTTTTGATGTTCAATCCTCAAGGATATTTCAGATTTGTCTTTAATATTGTTTAGACCTTCATTCTTGTTATGTTTCTTTGGTTGATGCGCTTGATATCATATGTTTTCTATTGGACTTTAAATTCTTATGACTCTTCCATGTTGATATCTGAATACATAACTCTGTTCATGTATATTTGAAACATTCATTTAGGACTCTGCTAGATTTTGAAAGCTCCTGTTCTATAACTTGTTCTTCTTTTGATTTATTGGGAATTTTGAGAAAGTGTTCATGTCTATATTTTGCAGGTTTCTCCACATAAAAGGGGGATAAGAAATGGCCCAAAGGCTCTAAAACCTATTCCAGTTATAATTAGGTGCAAGTAAGACTCTCCCTTCCTTGCCTTAACAAATTAGTCTTCAACATTGATCTCAGCTTTTAGGAAGGTTTCTCTGCTTGAATGTTGTTTATTTTGATATCAAAACATGGTTCATCTAATAATGACATACAATCGGCTAATCATAGCTCAACTGGTCAGACAAATACTCTCGATCAAGAGGTCAGAGGCTTACTCATCCCCACATATGTTGTTAAACTCAACATCTAGTAATTGCATACATTATTGCATCATTGTTAGGGAGCTGTTTTTTCACATGACCTGAACTTACCTGATTGTGATTTTGTAATTTTTTGCTTCATTTCAAATGTATTTCAGTATGCTAGTTAAGTTCTCACAAATTGTTAGACCTGTAGTTCAGTTCACCGAGACGATTGGTTATCTCTTGTTAGTGGCTGACGCCAAGTGTTAGAGAAAACTTATATTTACTTTGTAGTCTTCCAAGAAAGAAAACAATGGAGTCAGCTGGTGTCATGGCTGATAGTGACTAGAATGCCAATTGACTGTGATAGCTAGCCAGAGTGTCAATTTTTTTCTTTACTTCATTCTGGGCATCTTGTTTGAAATAAATCCCAGAATATTATTACTTAGAAACATAATGAAATGTAAAAATAAGAATGTTTCTGATAGCAGAATTTATTTATTAACATCCTTAACATGTTAGCCTCACTGAAGTGAAGCGAAGAAATGTGGATTGTAGTTTTTATCTAACGAACGAAGTGTAAGCTGCTTTATTTTTCTTCACATGCTGATGGGTTGCATTGCATTTATTTCTTATGTTTGATTGTCATCAAACAAATCTCTCCTGATTCTACCGGCCCGAAACATATCCATTAATTTTTCTTTCGAAATTTATCTAAGGTGTAACAGCTCAAGACTACTGCTAGTAGATATTGTCCTCTTTGGACTTTCCCTTTTGGGTTTTCCAGGTTTCCTCACCCTTATAAAAAAATATTTCGTTCCCTTCTCCAACCAACGTGGGATCTCACAATCCACTTTCAGGACCCAACATTCTTGCTGGCACATGTGAGATCTCACAATCCACCCCCTTTGGGGCTTAGCGTCCTCGCACACCACCTAGTGTCTGACCTTGATATCGTTTATAACAGCCCAAGTCCACCATTAGCAGATATTCTTCTCTTTGGATTTTTTCTTTCGGGCTTCTCCTCAAGGTTTTTAAAACGCGTCTACTAGGGAGAGGTTTCCACACCATTAGCAGATATTCTTCTCTTTGGATTTTTGGTTCATATGACTGGTACAAAATCTGATATTTTGATAAAATCAGCACATAGTATTTGTGATTATGTAAAATGGCCATAGTTTTCAAGAATGTTCATGGGGTTGACTGTGTTGTTATTGCAGGA

mRNA sequence

GCCTACATATATTGTCATATTTGGATTTTTCTTTTTAGGTTCACGTTTTTAAAACGAGTCTACTTTGAAAGAGGTTTCCACACTATTACAAAGAATGTTTTGTTACCCTCTCCACTCAACGTAGGATCGCACAACAGATCAATCAACACCGACGTCTATAAATTGGGATCCAAGCCTGTTACCGGCCCATTGGCCCTGGACTCGTTAAAACGACGCCGTCGATTTGTATTGTGGCATTTCCAAATTCCTAAAACCCCGTCGTCATCTTAGGCCGATTTGCACCGCCGGTATACTGAAAGCAGCACTGCCACTTGCTCGCAGCTATGGCGTTGAGGATTTTGAGGGCGGTAGAGGGTCAGACGGGTTCGATGTTTGGGTTGAAGGCGATGGCTAAGGTTTTACCCCATTCTTCGCCGATATCTGGGATCATGGACCATAAGGATTCCGCGCCGCCGCTTGTTCTGCCGGAGTTTAACCATGAATCTGATAGGGACGGGATCAACAACTGCAGTATTGTGGGGTTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCGATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTTTCTCCACATAAAAGGGGGATAAGAAATGGCCCAAAGGCTCTAAAACCTATTCCAGTTATAATTAGTATGCTAGTTAAGTTCTCACAAATTGTTAGACCTGTAGTTCAGTTCACCGAGACGATTGGTTATCTCTTGTTAGTGGCTGACGCCAAGTGA

Coding sequence (CDS)

ATGGCGTTGAGGATTTTGAGGGCGGTAGAGGGTCAGACGGGTTCGATGTTTGGGTTGAAGGCGATGGCTAAGGTTTTACCCCATTCTTCGCCGATATCTGGGATCATGGACCATAAGGATTCCGCGCCGCCGCTTGTTCTGCCGGAGTTTAACCATGAATCTGATAGGGACGGGATCAACAACTGCAGTATTGTGGGGTTTGGTTTCCCTAGTTTATCTTTTTCCGGGTCGATGGAGCTCATGGCTGTTCCTAAGAGGAAGGTTTCTCCACATAAAAGGGGGATAAGAAATGGCCCAAAGGCTCTAAAACCTATTCCAGTTATAATTAGTATGCTAGTTAAGTTCTCACAAATTGTTAGACCTGTAGTTCAGTTCACCGAGACGATTGGTTATCTCTTGTTAGTGGCTGACGCCAAGTGA

Protein sequence

MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGINNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVIISMLVKFSQIVRPVVQFTETIGYLLLVADAK

Homology

[Close]

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL
Match: A0A6J1HYN6 (50S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467436 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.5e-54
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL
Match: A0A6J1G1I2 (50S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449817 PE=3 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 4.4e-50
Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAMA VLPHSSPI+GI+  KDSAPPLVLPEFNHESDRDGIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL
Match: A0A6J1DBR3 (50S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019232 PE=3 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 5.0e-46
Identity = 97/109 (88.99%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRI+RAVEGQT SM GLKAMA VLPH SP+SGIMD KDS PPLVLPEFNHESD D I 
Sbjct: 1   MALRIMRAVEGQTCSMLGLKAMANVLPHFSPLSGIMDRKDSTPPLVLPEFNHESDSDRIG 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCS VGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSSVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL
Match: A0A0A0KQP7 (50S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606360 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 90/109 (82.57%), Postives = 95/109 (87.16%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRI+RA+EGQ GSM GLKAMA  LPHSSPISG+M  KDS PPLVLPEFN E D D  N
Sbjct: 1   MALRIMRALEGQMGSMLGLKAMAYGLPHSSPISGVMGPKDSPPPLVLPEFNQEYDDDKTN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPK+KVSPHKR IRN PKALKPIPVI+
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIPVIV 109

[Close]

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL
Match: A0A5A7SYB6 (50S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00190 PE=3 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.3e-40
Identity = 90/109 (82.57%), Postives = 94/109 (86.24%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRI+RA+EGQTGSM GLKAMA  LPHSS   G+M  KDS PPLVLPEFN ESD D IN
Sbjct: 1   MALRIMRALEGQTGSMLGLKAMAYGLPHSS--HGVMGPKDSPPPLVLPEFNQESDEDRIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSL FSGSMELMAVPK+KVSPHKR IRN PKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLYFSGSMELMAVPKKKVSPHKRRIRNAPKALKPIPVII 107

[Close]

BLAST of CmaCh18G011320 vs. NCBI nr
Match: XP_022968104.1 (uncharacterized protein LOC111467436 [Cucurbita maxima])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. NCBI nr
Match: KAG6574067.1 (hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 213.8 bits (543), Expect = 9.6e-52
Identity = 106/109 (97.25%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAM KVLPHSSPISGIMD KDSAPPLVLPEFNHESDRDGIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. NCBI nr
Match: XP_023541204.1 (uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 210.7 bits (535), Expect = 8.1e-51
Identity = 105/109 (96.33%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAM KVLPHSSPISGIMD KDSAPPLVLPEFNHESDRD IN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPISGIMDRKDSAPPLVLPEFNHESDRDRIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. NCBI nr
Match: KAG7013127.1 (hypothetical protein SDJN02_25883 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 103/109 (94.50%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAM KVLPHSSPI+GI+D KDSAPPLVLPEFNHESDR+GIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMTKVLPHSSPITGIIDRKDSAPPLVLPEFNHESDREGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. NCBI nr
Match: XP_022945635.1 (uncharacterized protein LOC111449817 [Cucurbita moschata])

HSP 1 Score: 207.2 bits (526), Expect = 9.0e-50
Identity = 103/109 (94.50%), Postives = 105/109 (96.33%), Query Frame = 0


Query: 1   MALRILRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDGIN 60
           MALRILRAVEGQTGSMFGLKAMA VLPHSSPI+GI+  KDSAPPLVLPEFNHESDRDGIN
Sbjct: 1   MALRILRAVEGQTGSMFGLKAMANVLPHSSPITGIIYRKDSAPPLVLPEFNHESDRDGIN 60

Query: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           NCSIVGFGFPSLSFSGSMELMAVPKRK SPHKRGIRNGPKALKPIPVII
Sbjct: 61  NCSIVGFGFPSLSFSGSMELMAVPKRKTSPHKRGIRNGPKALKPIPVII 109

[Close]

BLAST of CmaCh18G011320 vs. TAIR 10
Match: AT1G26740.1 (Ribosomal L32p protein family )

HSP 1 Score: 104.8 bits (260), Expect = 5.9e-23
Identity = 56/111 (50.45%), Postives = 76/111 (68.47%), Query Frame = 0


Query: 1   MALRI--LRAVEGQTGSMFGLKAMAKVLPHSSPISGIMDHKDSAPPLVLPEFNHESDRDG 60
           MALR+  L+    ++  +   ++++ V    SP++G  D   S PPLVLPEF  + ++ G
Sbjct: 1   MALRLTSLKRAAVESCRILETRSLSHVAAMPSPLNGAFDRPISMPPLVLPEF--DQNQPG 60

Query: 61  INNCSIVGFGFPSLSFSGSMELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           +      GFG PS +F+GSMELMAVPK+K+S HKRGIRNGPKALKP+PVII
Sbjct: 61  LIEEKSFGFGLPSFAFNGSMELMAVPKKKISKHKRGIRNGPKALKPVPVII 109

[Close]

BLAST of CmaCh18G011320 vs. TAIR 10
Match: AT1G69485.1 (Ribosomal L32p protein family )

HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09
Identity = 27/32 (84.38%), Postives = 29/32 (90.62%), Query Frame = 0


Query: 78  MELMAVPKRKVSPHKRGIRNGPKALKPIPVII 110
           MELMAVPK+K+S HKRGIRNGPKA KP PVII
Sbjct: 1   MELMAVPKKKISKHKRGIRNGPKAFKPTPVII 32

The following BLAST results are available for this feature:

BLAST of CmaCh18G011320 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh18G011320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HYN6	6.5e-54	100.00	50S ribosomal protein L32, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11146...	[more]
A0A6J1G1I2	4.4e-50	94.50	50S ribosomal protein L32, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1DBR3	5.0e-46	88.99	50S ribosomal protein L32, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A0A0KQP7	1.3e-41	82.57	50S ribosomal protein L32, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_5G606...	[more]
A0A5A7SYB6	5.3e-40	82.57	50S ribosomal protein L32, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 ...	[more]

BLAST of CmaCh18G011320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022968104.1	1.3e-53	100.00	uncharacterized protein LOC111467436 [Cucurbita maxima]	[more]
KAG6574067.1	9.6e-52	97.25	hypothetical protein SDJN03_27954, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023541204.1	8.1e-51	96.33	uncharacterized protein LOC111801437 [Cucurbita pepo subsp. pepo]	[more]
KAG7013127.1	1.8e-50	94.50	hypothetical protein SDJN02_25883 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022945635.1	9.0e-50	94.50	uncharacterized protein LOC111449817 [Cucurbita moschata]	[more]

BLAST of CmaCh18G011320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G26740.1	5.9e-23	50.45	Ribosomal L32p protein family	[more]
AT1G69485.1	2.8e-09	84.38	Ribosomal L32p protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21026	39S RIBOSOMAL PROTEIN L32, MITOCHONDRIAL	coord: 7..110
None	No IPR available	PANTHER	PTHR21026:SF5	BNACNNG33200D PROTEIN	coord: 7..110

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G011320.1	CmaCh18G011320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005762	mitochondrial large ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome