CmaCh18G010390 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACCACAGTTCTGTTGTTCATCAACACGAAATCTTGGCGACGAAGGAAACGAGGAGTAAATACCAGAGAGCAACAATCAACAAATAACAACGAGATATTGACCCACCAATTCTATATTCAAATTAGCCTCAAACTTCAGCGCGTGTATCGAGCTGTCTCTACTTGGGTGTTCATCGTTGAGGATTGCGCGAGCGAGGCAGGGGGTTTGTTCATCCAAACTTGAGTTGATAATTGTTCTTCTTGGAGCCGATTTGAAAGCAAATTAGTGTTGAAGGGGTCCCTGAACAAATTTTCATTGGCCCTATTCGTTTTTTCTTCCTACTTGAATCAGTTACCCGGTGATTGAGTTTTGATTTTGTCGAAGATGCTGCTGCAATTTTCAGACCCGGCCAAGCTTAAAACCAAGATGGTATGTTTCTGTTCTTCTGGGTTTTTTAATTTGAATTGCCATATGAGTTTTTTCGAGTGTGGAATTGTGATGTGGTGGAGGTTTCAAGAGCCAATTTCATGGTTGTAATGTAGTTTTGATCCTGCCTTAATCAGTCTCAGGTTATAAATTCAAGCCATGTGGCTACCTATTAGGATTTCGTCTCCAATTATCTTGGCAATTAAGTACTTCAGAGCTGGATAGAACTAAAAATGGTCGAGGGGCACGTATGATACATATGTGTGTATATATATATATCTTTCATCGACCACGTTACGGGGAATGACCCAAGAACAAAAAAGCTTAGATACAACATAAGATGTTCATCCTTGCCCGAATAAAAGGAAGGGTTTGTGCTGCCCGCTCTAAAGGTTTTCCAAGAACTTCTTTGGGTGGGAAAGTCTAGACTAGAACTGACTGACTCTTGAAGAGATAAACCATCAAAAGCAGGCAACAAAAAGTCCCTTCCATTTTTTTTTTTTTTTTTTTTGCAAGTAGAGCATTAAAAACACCAAAGCTAGCCTATCTAGTAATCGTGCAAGTGGAGAGAATTCCATACTTGAGAGAAACTATACCAAAAAATTGAAAATGAGATTCCTTCTAGACTAGCTTTCGTTTGAGTAATTACTGAACTCAACTAAGCTACAAGTTAGAGACCAATATGAGTATAGCACAGGCAGAAATTCAGGCCGTACCGAAGAAGTCTTTGAACTATAAGTAATAAGGGATTAAAGAAAATCGAAAATCATAAAGAGTAGTGAAAGAAATACTAGTTAGAGAGCTTAGTAGTCTTTGTTATGGTTAATTATCATTTGAGACTATAGTGATAATTTGTCAATATGCACAGTGTGTGTTTGAGGACAAATTCATTGCCCGCGATTCCAGTACACTTGAACAACTGAAGGAGATGACTTCTAGGCGTAAAGTGATTGAGGAGTCCATTAATGAAACTAGCTTTATCACAGATGCTATTGCAAGAGAAATGTCTGGCGGGTTGTCTTCCCACACTCAACAGGTAACATATCAATAATTTGCCAACCTTATTGGTAAATGCTCCTTTGTGATTCTAATACATGAATATATATGTTCTTTCACGCTAAAGGTGCCTTGGATTTGTAACGACCCTAGATTTCTACTTAACCTGAAGTCATTATTGGATATATAATGTAATCATTTTATACGGAAATAATCATTTGAAACTTCATCGTAAAACACTGTCATGGACTTACATAACTTTCTTATGCATGTGTCATGGTCTCTACTTGTTTTATTTTAATTTTCGTTATGTTGCTTTAAAGACGTTTTCAAATATGTAAGTCTATGACAATGTTTTACGATGATGTTTCAATGTTTATTTCCACGTAATAGAGGATGATAGATGGATTTGGCTTGATTTATTCCTACAATTTCAGCCCATTTACATATATGCTTGATTTAAACCAATGATTTCTCCATCTCTTCCTATGATTTGGTGGTTCAGCTTTGTCTGTCTGTCTCGGTTTTATCTTTTTATGAGATTGTCATGGCTGTTGTATGCTCATTCAATTATGTTCTGTGTTCAAAACATTCCAGGTCCTTCATAAACTACTGCAATACCTGCCCTTATTGGAAAATTTTGTTTCCCAAGTTGATCTGGTCGGCTATAACCTCAAGATTGTTCAATGGACATCAGACCTAAAGATACGATGGTCGAGTGCTCTGAGCTCATCATCATTATTTCATCTTAGGGGTCCAAAATTTTTCCAAATAGATAACTTGAGGTTCGAGGTAGCGATGACTCTTTTCCTATACGGTGCTGTTCTTAGGAAGAGGGCCTTAGAAGTTATATCAGAAGGTGGGTAGTAATGATGAACTAGTTTCCTGTACAAGTTTTGGATTTATACCTATTGGATCACTTACTTTTCTCTTATACAGATAAAGTGCAATCTGCGACCTTTTTCAGAGAAGCTGCCGGGGTTTATCAATATCTAGCTAAGGATATTCTTCCATCTATTCAACACTGCGTGCCTTCTGAAAGGCCACCAGAAGTTATTCCATCTACTTCTGTTGCAATGAGTCTTGTTTGTTTAGCTGAGGCTCAGGTTAGTTTTCTGGTCTCTGAAAACCACCTTGAAAGTTCATCCGATAATTGTTGGATCATGGAGTGCTGCTTATTTATTATTCAATTGTTATACATTGTAAAGCTATATATGAAAAATGGTCATATATAAAGTTGGTAAAGTTATATCTGGTAGATAGTTACATAACCAATATACAGTAGTTGGTTATATCTGGTAAAATTATATATATACTAAATTGAATCATATATATGTTCCTGGCCTGCATGAGGACTTGTGTGTATGTTTTGGAATAGGGATGTTCGCTTTTTGTAACAAGTAGACCCATGATACGGACTAATAGATGTTCATACTCTTACCCGAAAGTCATATATCTATATCATAGTTGGCCAATTCCCCACGGCTTCTCGCCTTTCATGAATGTGTCCCCCTTTGCTTATGTGAGTTTTACCCGCCTTTGATTCCGCTTGCTCCTGACTCCCTATGAGCCATTTGACGACCTTGACTTTTTTAAAGGGTTGGCGGGACATGGGAGCCTAAGCTCATACGTTGATTATCCCTATAGGCAGTGCTTTGAAAATGTACTTTTTGTATCCTATGTATTCGCTTCTACTATACATACTTGAAACCATCGATATAAATCTTTAGCCAATATTCCACCTTGAATTTTCTCTCTCAAGTTCTTTGTGTTCATCTAGATCAAATGTGTGCGTTATTGTACAATCCTAACAATAAATGGCCTTAAACTTGATAGTGCACTTTGTGAGGTATGTTCGAGAGTGATTTCGGAATGACAAAAACCACTTTATCATTCTTCTGTAGTGGTTTTGAACATGATAAAAGTGATTCCTATATCGCTCTCAAGCATGCCTTAAATAGTATAATTGGCCTTGATCGGGGTTAGGAATTCGGGAGGTATCGTTTTCTTTTTAAGACTGTTCTCAATGATGTTTATCTATATTGATCATGTCATAAAAAACATATCAGGCTGTCACAACGATGAGGGCTGAAGAAAAGGGATCTATTTCAAGTCTTTTGGCTAAGCTACACTATGGTATTGTTGACTTGCTCAATGAATCAGCTAATCATTTACGCATATTCTCTGGAGAATCCTCAAGCTTTCTGGTACGAATGCTTCCTGCTAGTTCATGCTCGTTTTAAATGTTCATATCGAACTAGCTCGTATGTATAAGACTCGTTATAATCTTTATCATTTTTCGTCGGTATAGGAATTTCTATCAGCTTTTCGAGCTCTACACGAGTTGAAAAGTCGAAAAAATCTTGCAAAAGAATTGATGTCTGGTGGCCAAGTTGGACTTGCTATAGGTATTCTTAGACATGCATTAACCGATGTGAAAAAGGAAATGCCAAGAGAAAATTCCTGGAAACTTGTTTTCGGAACAGAAATAGATATTGTAGCTGAAACGCTAAGGAAGTTCGAACGTGAGAATGAGATCGTATGGCATAAGAAAATTCCTTCGAGAGATGAGTTGCCAACGCTTAAAGGTAGCCGAATCGTCAAGTCGATACCATATTGTCCCAAAAAATGGGAGAGAGAGCTAGCATTCAAGATGTGAACCAAAGCTAGAAGTATATATTGGGTCTTGTTCTTGTTGGGGAGCTACTTTTGCCCCCAACCTCATTCTATCAAAGTATAAGAAAAATATCTCCTTAGGTGGTTGAGAGAATTGTTGGTGAAAATGTGAAGCATTTGTATAGGAAGTGACATTTATTACTGTGGTTGCTATTTCTCTGCCAACTATCGAAGCTTTCGTTGAAATAAAATTCTTGAATCAAAGAAATTC ACCACAGTTCTGTTGTTCATCAACACGAAATCTTGGCGACGAAGGAAACGAGGAGTAAATACCAGAGAGCAACAATCAACAAATAACAACGAGATATTGACCCACCAATTCTATATTCAAATTAGCCTCAAACTTCAGCGCGTGTATCGAGCTGTCTCTACTTGGGTGTTCATCGTTGAGGATTGCGCGAGCGAGGCAGGGGGTTTGTTCATCCAAACTTGAGTTGATAATTGTTCTTCTTGGAGCCGATTTGAAAGCAAATTAGTGTTGAAGGGGTCCCTGAACAAATTTTCATTGGCCCTATTCGTTTTTTCTTCCTACTTGAATCAGTTACCCGGTGATTGAGTTTTGATTTTGTCGAAGATGCTGCTGCAATTTTCAGACCCGGCCAAGCTTAAAACCAAGATGTGTGTGTTTGAGGACAAATTCATTGCCCGCGATTCCAGTACACTTGAACAACTGAAGGAGATGACTTCTAGGCGTAAAGTGATTGAGGAGTCCATTAATGAAACTAGCTTTATCACAGATGCTATTGCAAGAGAAATGTCTGGCGGGTTGTCTTCCCACACTCAACAGGTCCTTCATAAACTACTGCAATACCTGCCCTTATTGGAAAATTTTGTTTCCCAAGTTGATCTGGTCGGCTATAACCTCAAGATTGTTCAATGGACATCAGACCTAAAGATACGATGGTCGAGTGCTCTGAGCTCATCATCATTATTTCATCTTAGGGGTCCAAAATTTTTCCAAATAGATAACTTGAGGTTCGAGGTAGCGATGACTCTTTTCCTATACGGTGCTGTTCTTAGGAAGAGGGCCTTAGAAGTTATATCAGAAGATAAAGTGCAATCTGCGACCTTTTTCAGAGAAGCTGCCGGGGTTTATCAATATCTAGCTAAGGATATTCTTCCATCTATTCAACACTGCGTGCCTTCTGAAAGGCCACCAGAAGTTATTCCATCTACTTCTGTTGCAATGAGTCTTGTTTGTTTAGCTGAGGCTCAGGCTGTCACAACGATGAGGGCTGAAGAAAAGGGATCTATTTCAAGTCTTTTGGCTAAGCTACACTATGGTATTGTTGACTTGCTCAATGAATCAGCTAATCATTTACGCATATTCTCTGGAGAATCCTCAAGCTTTCTGGAATTTCTATCAGCTTTTCGAGCTCTACACGAGTTGAAAAGTCGAAAAAATCTTGCAAAAGAATTGATGTCTGGTGGCCAAGTTGGACTTGCTATAGGTATTCTTAGACATGCATTAACCGATGTGAAAAAGGAAATGCCAAGAGAAAATTCCTGGAAACTTGTTTTCGGAACAGAAATAGATATTGTAGCTGAAACGCTAAGGAAGTTCGAACGTGAGAATGAGATCGTATGGCATAAGAAAATTCCTTCGAGAGATGAGTTGCCAACGCTTAAAGGTAGCCGAATCGTCAAGTCGATACCATATTGTCCCAAAAAATGGGAGAGAGAGCTAGCATTCAAGATGTGAACCAAAGCTAGAAGTATATATTGGGTCTTGTTCTTGTTGGGGAGCTACTTTTGCCCCCAACCTCATTCTATCAAAGTATAAGAAAAATATCTCCTTAGGTGGTTGAGAGAATTGTTGGTGAAAATGTGAAGCATTTGTATAGGAAGTGACATTTATTACTGTGGTTGCTATTTCTCTGCCAACTATCGAAGCTTTCGTTGAAATAAAATTCTTGAATCAAAGAAATTC ATGCTGCTGCAATTTTCAGACCCGGCCAAGCTTAAAACCAAGATGTGTGTGTTTGAGGACAAATTCATTGCCCGCGATTCCAGTACACTTGAACAACTGAAGGAGATGACTTCTAGGCGTAAAGTGATTGAGGAGTCCATTAATGAAACTAGCTTTATCACAGATGCTATTGCAAGAGAAATGTCTGGCGGGTTGTCTTCCCACACTCAACAGGTCCTTCATAAACTACTGCAATACCTGCCCTTATTGGAAAATTTTGTTTCCCAAGTTGATCTGGTCGGCTATAACCTCAAGATTGTTCAATGGACATCAGACCTAAAGATACGATGGTCGAGTGCTCTGAGCTCATCATCATTATTTCATCTTAGGGGTCCAAAATTTTTCCAAATAGATAACTTGAGGTTCGAGGTAGCGATGACTCTTTTCCTATACGGTGCTGTTCTTAGGAAGAGGGCCTTAGAAGTTATATCAGAAGATAAAGTGCAATCTGCGACCTTTTTCAGAGAAGCTGCCGGGGTTTATCAATATCTAGCTAAGGATATTCTTCCATCTATTCAACACTGCGTGCCTTCTGAAAGGCCACCAGAAGTTATTCCATCTACTTCTGTTGCAATGAGTCTTGTTTGTTTAGCTGAGGCTCAGGCTGTCACAACGATGAGGGCTGAAGAAAAGGGATCTATTTCAAGTCTTTTGGCTAAGCTACACTATGGTATTGTTGACTTGCTCAATGAATCAGCTAATCATTTACGCATATTCTCTGGAGAATCCTCAAGCTTTCTGGAATTTCTATCAGCTTTTCGAGCTCTACACGAGTTGAAAAGTCGAAAAAATCTTGCAAAAGAATTGATGTCTGGTGGCCAAGTTGGACTTGCTATAGGTATTCTTAGACATGCATTAACCGATGTGAAAAAGGAAATGCCAAGAGAAAATTCCTGGAAACTTGTTTTCGGAACAGAAATAGATATTGTAGCTGAAACGCTAAGGAAGTTCGAACGTGAGAATGAGATCGTATGGCATAAGAAAATTCCTTCGAGAGATGAGTTGCCAACGCTTAAAGGTAGCCGAATCGTCAAGTCGATACCATATTGTCCCAAAAAATGGGAGAGAGAGCTAGCATTCAAGATGTGA MLLQFSDPAKLKTKMCVFEDKFIARDSSTLEQLKEMTSRRKVIEESINETSFITDAIAREMSGGLSSHTQQVLHKLLQYLPLLENFVSQVDLVGYNLKIVQWTSDLKIRWSSALSSSSLFHLRGPKFFQIDNLRFEVAMTLFLYGAVLRKRALEVISEDKVQSATFFREAAGVYQYLAKDILPSIQHCVPSERPPEVIPSTSVAMSLVCLAEAQAVTTMRAEEKGSISSLLAKLHYGIVDLLNESANHLRIFSGESSSFLEFLSAFRALHELKSRKNLAKELMSGGQVGLAIGILRHALTDVKKEMPRENSWKLVFGTEIDIVAETLRKFERENEIVWHKKIPSRDELPTLKGSRIVKSIPYCPKKWERELAFKM Homology
BLAST of CmaCh18G010390 vs. ExPASy Swiss-Prot
Match: Q9W6C5 (Programmed cell death 6-interacting protein OS=Xenopus laevis OX=8355 GN=pdcd6ip PE=1 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.3e-09 Identity = 57/259 (22.01%), Postives = 116/259 (44.79%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy Swiss-Prot
Match: Q12033 (pH-response regulator protein palA/RIM20 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RIM20 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.1e-07 Identity = 59/255 (23.14%), Postives = 113/255 (44.31%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy Swiss-Prot
Match: Q8WUM4 (Programmed cell death 6-interacting protein OS=Homo sapiens OX=9606 GN=PDCD6IP PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.0e-06 Identity = 54/259 (20.85%), Postives = 107/259 (41.31%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy Swiss-Prot
Match: Q9WU78 (Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3) HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06 Identity = 53/259 (20.46%), Postives = 107/259 (41.31%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy Swiss-Prot
Match: Q8WZL4 (pH-response regulator protein RIM20 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=RIM20 PE=3 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 2.2e-05 Identity = 65/287 (22.65%), Postives = 123/287 (42.86%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy TrEMBL
Match: A0A6J1HUA9 (uncharacterized protein LOC111467531 OS=Cucurbita maxima OX=3661 GN=LOC111467531 PE=4 SV=1) HSP 1 Score: 727.2 bits (1876), Expect = 3.4e-206 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy TrEMBL
Match: A0A6J1FZA5 (uncharacterized protein LOC111449253 OS=Cucurbita moschata OX=3662 GN=LOC111449253 PE=4 SV=1) HSP 1 Score: 704.1 bits (1816), Expect = 3.1e-199 Identity = 362/375 (96.53%), Postives = 369/375 (98.40%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy TrEMBL
Match: A0A1S3BFB8 (uncharacterized protein LOC103489257 OS=Cucumis melo OX=3656 GN=LOC103489257 PE=4 SV=1) HSP 1 Score: 644.4 bits (1661), Expect = 2.9e-181 Identity = 331/379 (87.34%), Postives = 355/379 (93.67%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy TrEMBL
Match: A0A0A0KR44 (BRO1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G608410 PE=4 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 1.1e-180 Identity = 332/379 (87.60%), Postives = 355/379 (93.67%), Query Frame = 0
BLAST of CmaCh18G010390 vs. ExPASy TrEMBL
Match: A0A5A7SYL1 (BRO1 domain-containing protein BROX OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00750 PE=4 SV=1) HSP 1 Score: 582.0 bits (1499), Expect = 1.8e-162 Identity = 300/340 (88.24%), Postives = 319/340 (93.82%), Query Frame = 0
BLAST of CmaCh18G010390 vs. NCBI nr
Match: XP_022968231.1 (uncharacterized protein LOC111467531 [Cucurbita maxima]) HSP 1 Score: 727.2 bits (1876), Expect = 7.0e-206 Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
BLAST of CmaCh18G010390 vs. NCBI nr
Match: XP_022944843.1 (uncharacterized protein LOC111449253 [Cucurbita moschata] >XP_022944844.1 uncharacterized protein LOC111449253 [Cucurbita moschata]) HSP 1 Score: 704.1 bits (1816), Expect = 6.3e-199 Identity = 362/375 (96.53%), Postives = 369/375 (98.40%), Query Frame = 0
BLAST of CmaCh18G010390 vs. NCBI nr
Match: XP_023541232.1 (uncharacterized protein LOC111801459 [Cucurbita pepo subsp. pepo] >XP_023541233.1 uncharacterized protein LOC111801459 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 703.0 bits (1813), Expect = 1.4e-198 Identity = 361/375 (96.27%), Postives = 370/375 (98.67%), Query Frame = 0
BLAST of CmaCh18G010390 vs. NCBI nr
Match: KAG6573989.1 (hypothetical protein SDJN03_27876, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 701.0 bits (1808), Expect = 5.4e-198 Identity = 361/375 (96.27%), Postives = 368/375 (98.13%), Query Frame = 0
BLAST of CmaCh18G010390 vs. NCBI nr
Match: KAG7013047.1 (palA [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 661.8 bits (1706), Expect = 3.6e-186 Identity = 344/375 (91.73%), Postives = 351/375 (93.60%), Query Frame = 0
BLAST of CmaCh18G010390 vs. TAIR 10
Match: AT1G13310.1 (Endosomal targeting BRO1-like domain-containing protein ) HSP 1 Score: 295.8 bits (756), Expect = 4.8e-80 Identity = 168/369 (45.53%), Postives = 239/369 (64.77%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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