|
|
Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGAACTGGAATTCTTTCGGATCAAGGCAGCTGGAGACTGACCTGACCTTGCTGCAATCCGAAAACTGCTCTATCGGGAGGATGAGAAGGAAGACGCCGACGCCGACTGTCCAATTCTCCTTTCTGCAAACGACAGGCAAGTTTATCACGATCGGTGGCGATCACACTAGAAAAGATATCCAGAATTATGAGTGTAAGAGAAGTACTACGTCTCTCACCTCCTGTTGTGATGAGCTTTTCAACTCGAGATACAATATGTTTACCGTAAGTATACCTCTTGAGGGAGTTCAAGTGAACCCTGATACGAGAGAGAATTAATTCAAGACTATGGTCATCACATGACTCTAGAACCTTTTGGACAACGTAGTTCCCGAACGGATCCTTCATCATTGCCTGTAACATATCATTTTATCAGACCAATTATTTGTAAATTGATACAAGCATTGTATGCATAGAAGTTACTGCTGATCATCCTAATATCACCAAGAACTTACGTTTCTATCAAATTACTATATATGATCTCTCAACTGTAATACGAAATACACCCAATTGTTGTAAAAGTGGAATATTTCTTCCCATTTATTGAACATGTTAAGATACAGGTATTAAGGCAGCGTGTATGTTGATGTTAAGAGTGTGTTCGCAAAAGCTCGACTTTAAAGTGAAAAACACAGCATGTTATGCTTCTCTTGCATGATCAAAGGCAGGTACACACGAGAATTTAAAGATGAGTAAGAATTCAACAGACCTGCAAGGGCTCATTCTCATCAGTAGAACCAAGAATCTCGTTAATTAGTAGTTGACGTTCCTCGGGACTGCCAAATGTTAAACACTTCTCCACAACATTAGAAGCAAACTTCTGTTGACTCATCTTTACAATCTGTCCTGCAAGCTTACTTATAATAGCAGACCGCTCGTGCGGTTTACCGAATTGAAGTACATGCTACAAAAGAAGGCCACAGAATTGGTACAGAGATATAA mRNA sequence ATGAACTGGAATTCTTTCGGATCAAGGCAGCTGGAGACTGACCTGACCTTGCTGCAATCCGAAAACTGCTCTATCGGGAGGATGAGAAGGAAGACGCCGACGCCGACTGTCCAATTCTCCTTTCTGCAAACGACAGGCAAGTTTATCACGATCGGTGGCGATCACACTAGAAAAGATATCCAGAATTATGAGTGTAAGAGAAGTACTACGTCTCTCACCTCCTGTTGTGATGAGCTTTTCAACTCGAGATACAATATGTTTACCACCGCTCGTGCGGTTTACCGAATTGAAGTACATGCTACAAAAGAAGGCCACAGAATTGGTACAGAGATATAA Coding sequence (CDS) ATGAACTGGAATTCTTTCGGATCAAGGCAGCTGGAGACTGACCTGACCTTGCTGCAATCCGAAAACTGCTCTATCGGGAGGATGAGAAGGAAGACGCCGACGCCGACTGTCCAATTCTCCTTTCTGCAAACGACAGGCAAGTTTATCACGATCGGTGGCGATCACACTAGAAAAGATATCCAGAATTATGAGTGTAAGAGAAGTACTACGTCTCTCACCTCCTGTTGTGATGAGCTTTTCAACTCGAGATACAATATGTTTACCACCGCTCGTGCGGTTTACCGAATTGAAGTACATGCTACAAAAGAAGGCCACAGAATTGGTACAGAGATATAA Protein sequence MNWNSFGSRQLETDLTLLQSENCSIGRMRRKTPTPTVQFSFLQTTGKFITIGGDHTRKDIQNYECKRSTTSLTSCCDELFNSRYNMFTTARAVYRIEVHATKEGHRIGTEI
Homology
BLAST of CmaCh18G009030 vs. NCBI nr
Match: KAG7012909.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 193.7 bits (491), Expect = 8.2e-46 Identity = 96/103 (93.20%), Postives = 98/103 (95.15%), Query Frame = 0
Query: 9 RQLETDLTLLQSENCSIGRMRRKTPTPTVQFSFLQTTGKFITIGGDHTRKDIQNYECKRS 68
+QLETDLTLLQSENCS GRMRRKTPTPTVQFSFLQ TGKFITI GDHT KDIQNYECKRS
Sbjct: 409 KQLETDLTLLQSENCSTGRMRRKTPTPTVQFSFLQRTGKFITICGDHT-KDIQNYECKRS 468
Query: 69 TTSLTSCCDELFNSRYNMFTTARAVYRIEVHATKEGHRIGTEI 112
TSLTSCCDELFNSRY+MFTTARAVYRIEVHATKEGHRIGTEI
Sbjct: 469 ATSLTSCCDELFNSRYDMFTTARAVYRIEVHATKEGHRIGTEI 510
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| KAG7012909.1 | 8.2e-46 | 93.20 | Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
|
