CmaCh18G006780 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh18G006780
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	60S ribosomal protein L5-like
Location	Cma_Chr18: 6272062 .. 6274925 (+)
RNA-Seq Expression	CmaCh18G006780
Synteny	CmaCh18G006780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGATTCTGCCCTTACTCTTGTTTTCCGCCACTTCTCTTTCGGGTTCCTGCTCCGCTCGCGGCTCCAAATCTACAATGGTGAGAGCTCCATCCCTTTCCCTTGCGCTTTCGTTTGTTCTTGTTTCTATTGACTGGTTATACTATAGAAGTTCATGTAATCATACTTTTACTGCGTTTTCCGACTTCTCCATTGTACTGTTCATCTTCGCAATCCGTTGTTTGGTGGAATCTATGTCATATTTTGTCAGGAACTTGTCTGTAATTCGTAGGTTTCATGCTGTGTATGTGTAGGGATCTTTATTTTTAGCTATGTTGATGGTCGGACTGTTTTTTTTTTTTTTTGCTGGATTCTTCATTATCCCCTCCCCACTATGCCTGAATAGAAGTCCGTTTTTTTGGTCACTCGTTCCTAGCTTTTAGTTTGAGCATTCCGCCGCTCTTAATTATCATATATATCTTTGCTCTCACAGATCAGAGTTAACTTTATATTATTTTATCGTTTTTACGGCCATTGATTCATTAAATTGTAATTCGAAGTCATTTTTTATGTCGTGATATGTTACGATGTTGGGGGTAGTTAGTTACATGGTGGGTTGTTTATTGTAGGCTTTTGCCAAAGCTCAGAAGACGAAGGCCTACTTCAAACGTTATCAAGTCAAGTTCAAGAGAAGGAGAGGTATTTATTCCCTATATAAATAATGTCACTATGTTATTTATTCTTTTCTTGATTTCTGATTGTTGTATCTGAATATCCAGAGGGCAAGACTGACTATCGGGCCAGAATTCGTCTTATTAACCAGGACAAGAACAAGTACAATACTCCTAAGTATCGCATTGTTGTTCGATTTGTATCCTATGAAAGATCTGAGTTTGAATATTTTGTAGAAGTTTACATGTTTTGGGTGTTTAAGAGCATGAGTAATTGTTTCTCTTTTAGCTATCAAATGCAAGACTTTTTGTTGGGTTTTATTTTTAGATTACTTCTAGTTTTACATCTATTTTTCATGGATTTTGAGATGTGTGTCCTTGACATCATTCAATAGTCGAACAAAGATATCACAGCTCAGATAATTTCCGCCAGCATTGCTGGGGACTTGGTACTTGCTTCAGCTTATTCTCATGAGCTTCCCCGTTATGGGCTGGAAGTTGGTCTCACCAACTATGCTGCAGGTATGCTTTCAATCTTGTCACTCTTTCTTGTATGTCCGTTCATTTATAATATTCCCATTAACATTTTCAATGTCTTGATGAACAACTGTTTAAAAATTGTTTAGCATATTGCACTGGGCTTCTCTTGGCTCGACGGGTTTTGAAACAGCTCGAGATGGATGATGAATACGAAGGCAATGTGGAGGTACTTTGAATCTTAACTATTTCCTCTACCCCTATCTATATTATATTTTTAATTTTGTTAACACTATGATGTTGCACTCTTAGGCTACCGGTGAAGATTACTCTGTTGAGCCAGCTGATACCAGAAGGCCATTCCGCGCTTTACTTGATGTCGGTCTTCTTAAAACTACAACTGGAAATCGTGTTTTTGGTGCTCTTAAGGTACTTAGTTAGCAACCAGATATTCAATTTCTAGTTCTTTAAAATTTAATTTCTCTGTCAGCTCCTGTAATCAAAGTAATCTATGATGTTATTTTAAATCTCTGGTAAAATCTCATGGAAAACTAGTTTCTATAACTTGGAGCCAGTATCTACTTTTTTGAAATAAGTTGTCGAGTACACGTTTTGTAACCATCTCGTTGTTCTACACTTCTTCAGTTGATTGTTGTCATTCTATGGCCGGTTGGAATTGTTGATATAGAAGAATTTTTAGCGTTTGATGATTGTTCTGTGAAATTGGCCGTGTCAAAACCTGCAATGAATTTCAATTTGTAAAACACAGGGAGCTTTAGATGGTGGATTGGACATCCCTCACAGCGACAAGAGGTTTGCTGGGTTTTCCAAGGATAGCAAGCAGCTTGATGCTGATGTTCATAGGAAGTACATTTATGGTGGACACGTTGCGGCGTACATGCGGGTATGACCATGCAGTTTGTTTATTCTTACAATATGCTATTTGTATATCCTTCAAAAAAAAAAATTTGAAAAAGCGTCTGATAATTTGTTATATGGCTTTACCAGACCTTGATGGAAGATGAACCAGAGAAGTACCAAACCCACTTCAGCGAATACATCAAGAAGGGCATTGAGGCTGATGGCATTGAGGGTTTATACAAGAAAGTTCATGCCGCCATTCGGGCAGACCCATCAGTGAAGAAATCCGACAAGCCCCCACCCAAGGCACACAAGAGGTAGAAACGAAGCTCGAGCTCTTTTGTCGAGTGAAAAATATCTTTCCTAATTGTAACATTCTTTGTTGTGTGCATTGTTTATTAACATTCCCCTGTTATTGTTGGTTGAAAATTACAGATACAACTTGAAGAAGCTGACATATGATGAAAGAAAAGCTCGCTTGGTTGAACGTTTGAATGCTCTGAACTCTGCAGCTAATGCTGATGATGACGACGACGACGACGAGGATGACGAGTGAAAGATGAAAATTAGTTGATGTGGGCATGGAAGGATTTTAATGTAGTAGTTCTGCTATTTTATTATTTTAAGTTTCTTTCTTTGATCGAAAACTTTTCCCATCTTGGAGTGTTCTGTTACTTAGAATATACTTTTGGTCGCCTCTACTTTGTCACTTTTGATACCCATTTTCTCTTCCGATGCAAATCAAGTTTTGACTACCTTATTAGATCCTTTTATTTTTTAAAGGCATGGTTTTTGGTATTAGGAAAATTCAGGTCCATTTGGAGTTATTTTTTTAGCCCAAGGACATAGCGGGAATTACAAATATTTTATTAGGGCAG

mRNA sequence

GGGATTCTGCCCTTACTCTTGTTTTCCGCCACTTCTCTTTCGGGTTCCTGCTCCGCTCGCGGCTCCAAATCTACAATGGCTTTTGCCAAAGCTCAGAAGACGAAGGCCTACTTCAAACGTTATCAAGTCAAGTTCAAGAGAAGGAGAGAGGGCAAGACTGACTATCGGGCCAGAATTCGTCTTATTAACCAGGACAAGAACAAGTACAATACTCCTAAGTATCGCATTGTTGTTCGATTTTCGAACAAAGATATCACAGCTCAGATAATTTCCGCCAGCATTGCTGGGGACTTGGTACTTGCTTCAGCTTATTCTCATGAGCTTCCCCGTTATGGGCTGGAAGTTGGTCTCACCAACTATGCTGCAGCATATTGCACTGGGCTTCTCTTGGCTCGACGGGTTTTGAAACAGCTCGAGATGGATGATGAATACGAAGGCAATGTGGAGGCTACCGGTGAAGATTACTCTGTTGAGCCAGCTGATACCAGAAGGCCATTCCGCGCTTTACTTGATGTCGGTCTTCTTAAAACTACAACTGGAAATCGTGTTTTTGGTGCTCTTAAGGGAGCTTTAGATGGTGGATTGGACATCCCTCACAGCGACAAGAGGTTTGCTGGGTTTTCCAAGGATAGCAAGCAGCTTGATGCTGATGTTCATAGGAAGTACATTTATGGTGGACACGTTGCGGCGTACATGCGGACCTTGATGGAAGATGAACCAGAGAAGTACCAAACCCACTTCAGCGAATACATCAAGAAGGGCATTGAGGCTGATGGCATTGAGGGTTTATACAAGAAAGTTCATGCCGCCATTCGGGCAGACCCATCAGTGAAGAAATCCGACAAGCCCCCACCCAAGGCACACAAGAGATACAACTTGAAGAAGCTGACATATGATGAAAGAAAAGCTCGCTTGGTTGAACGTTTGAATGCTCTGAACTCTGCAGCTAATGCTGATGATGACGACGACGACGACGAGGATGACGAGTGAAAGATGAAAATTAGTTGATGTGGGCATGGAAGGATTTTAATGTAGTAGTTCTGCTATTTTATTATTTTAAGTTTCTTTCTTTGATCGAAAACTTTTCCCATCTTGGAGTGTTCTGTTACTTAGAATATACTTTTGGTCGCCTCTACTTTGTCACTTTTGATACCCATTTTCTCTTCCGATGCAAATCAAGTTTTGACTACCTTATTAGATCCTTTTATTTTTTAAAGGCATGGTTTTTGGTATTAGGAAAATTCAGGTCCATTTGGAGTTATTTTTTTAGCCCAAGGACATAGCGGGAATTACAAATATTTTATTAGGGCAG

Coding sequence (CDS)

ATGGCTTTTGCCAAAGCTCAGAAGACGAAGGCCTACTTCAAACGTTATCAAGTCAAGTTCAAGAGAAGGAGAGAGGGCAAGACTGACTATCGGGCCAGAATTCGTCTTATTAACCAGGACAAGAACAAGTACAATACTCCTAAGTATCGCATTGTTGTTCGATTTTCGAACAAAGATATCACAGCTCAGATAATTTCCGCCAGCATTGCTGGGGACTTGGTACTTGCTTCAGCTTATTCTCATGAGCTTCCCCGTTATGGGCTGGAAGTTGGTCTCACCAACTATGCTGCAGCATATTGCACTGGGCTTCTCTTGGCTCGACGGGTTTTGAAACAGCTCGAGATGGATGATGAATACGAAGGCAATGTGGAGGCTACCGGTGAAGATTACTCTGTTGAGCCAGCTGATACCAGAAGGCCATTCCGCGCTTTACTTGATGTCGGTCTTCTTAAAACTACAACTGGAAATCGTGTTTTTGGTGCTCTTAAGGGAGCTTTAGATGGTGGATTGGACATCCCTCACAGCGACAAGAGGTTTGCTGGGTTTTCCAAGGATAGCAAGCAGCTTGATGCTGATGTTCATAGGAAGTACATTTATGGTGGACACGTTGCGGCGTACATGCGGACCTTGATGGAAGATGAACCAGAGAAGTACCAAACCCACTTCAGCGAATACATCAAGAAGGGCATTGAGGCTGATGGCATTGAGGGTTTATACAAGAAAGTTCATGCCGCCATTCGGGCAGACCCATCAGTGAAGAAATCCGACAAGCCCCCACCCAAGGCACACAAGAGATACAACTTGAAGAAGCTGACATATGATGAAAGAAAAGCTCGCTTGGTTGAACGTTTGAATGCTCTGAACTCTGCAGCTAATGCTGATGATGACGACGACGACGACGAGGATGACGAGTGA

Protein sequence

MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDITAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAGFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKKVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDDEDDE

Homology

[Close]

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot
Match: Q6UNT2 (60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 1.7e-152
Identity = 279/304 (91.78%), Postives = 291/304 (95.72%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYR VVR SNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELP+YGLEVGLTNYAAAYCTGLLLARRVLK LEMD EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           G++K+ +QLD +VHRKYI+GGHVAAYMRTLMEDEPEKYQ+HFSEYIKKGIEAD +EGLYK
Sbjct: 181 GYAKNGQQLDVEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSEYIKKGIEADELEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRA+P  KKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSA  AD DDDDD
Sbjct: 241 KVHAAIRANPIAKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSA--ADGDDDDD 300

Query: 301 EDDE 305
           EDDE
Sbjct: 301 EDDE 302

[Close]

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot
Match: A2WXX3 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 SV=2)

HSP 1 Score: 492.7 bits (1267), Expect = 3.1e-138
Identity = 243/301 (80.73%), Postives = 275/301 (91.36%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDITA 62
           F K QKT AY+KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYR VVRF+NKDITA
Sbjct: 4   FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEGN 122
           QI+ A+IAGD+V+A+AYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK   +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 VEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 182
           +EATGEDY VEPAD RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFAGF
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKKV 242
            KD KQLD+D+HRKYIYGGHVA YMR++ E+EPEK+Q HFSEY+KKGI+ADG+E LYKKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDDED 302
           HAAIRADP++ KS K  P  HKRYNLKKLTY++RKA LVERLNALNS+A ADDDD++++D
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEEDD 303

Query: 303 D 304
           +
Sbjct: 304 E 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot
Match: Q8L4L4 (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5B PE=2 SV=2)

HSP 1 Score: 491.5 bits (1264), Expect = 6.9e-138
Identity = 244/301 (81.06%), Postives = 274/301 (91.03%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDITA 62
           F K QKT AYFKR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYR VVRF+NKDITA
Sbjct: 4   FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEGN 122
           QI+ A+IAGD+V+A+AYSHELPRYGLEVGLTNYAAAYCTGLLLARRVL    +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGN 123

Query: 123 VEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 182
           VEATGEDY VEPAD RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFAGF
Sbjct: 124 VEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKKV 242
            KD KQLD+D+HRKYIYGGHVA YMR++ E+EPEK+Q HFSEY+KKGI+ADG+E LYKKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMESLYKKV 243

Query: 243 HAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDDED 302
           HAAIRADP++ KS K  P  HKRYNLKKLTY++RKA LVERLNALNS+A ADDDD++++D
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEEDD 303

Query: 303 D 304
           +
Sbjct: 304 E 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot
Match: Q0JGY1 (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=2 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 8.9e-138
Identity = 243/301 (80.73%), Postives = 274/301 (91.03%), Query Frame = 0


Query: 3   FAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDITA 62
           F K QKT AY KR+QVKFKRRR+GKTDYRARIRL NQDKNKYNTPKYR VVRF+NKDITA
Sbjct: 4   FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITA 63

Query: 63  QIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEGN 122
           QI+ A+IAGD+V+A+AYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK   +D EYEGN
Sbjct: 64  QIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGN 123

Query: 123 VEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 182
           +EATGEDY VEPAD RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFAGF
Sbjct: 124 IEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183

Query: 183 SKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKKV 242
            KD KQLD+D+HRKYIYGGHVA YMR++ E+EPEK+Q HFSEY+KKGI+ADG+E LYKKV
Sbjct: 184 KKDEKQLDSDIHRKYIYGGHVADYMRSMAEEEPEKFQAHFSEYLKKGIDADGMEALYKKV 243

Query: 243 HAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDDED 302
           HAAIRADP++ KS K  P  HKRYNLKKLTY++RKA LVERLNALNS+A ADDDD++++D
Sbjct: 244 HAAIRADPTMAKSTKKEPATHKRYNLKKLTYEQRKASLVERLNALNSSAGADDDDEEEDD 303

Query: 303 D 304
           +
Sbjct: 304 E 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot
Match: Q8LBI1 (60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2)

HSP 1 Score: 488.8 bits (1257), Expect = 4.4e-137
Identity = 243/301 (80.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYR VVRF+NKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGED+SVEP D+RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GF K++KQLDA++HR YIYGGHV+ YM+ L EDEPEK QTHFS YIKKG+EA+ IE LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADP+ KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDD+DD+
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

Query: 301 E 302
           E
Sbjct: 301 E 301

[Close]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL
Match: A0A6J1HSR8 (60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111466439 PE=3 SV=1)

HSP 1 Score: 590.5 bits (1521), Expect = 4.0e-165
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD
Sbjct: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300

Query: 301 EDDE 305
           EDDE
Sbjct: 301 EDDE 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL
Match: A0A6J1G1M2 (60S ribosomal protein L5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111449844 PE=3 SV=1)

HSP 1 Score: 580.9 bits (1496), Expect = 3.2e-162
Identity = 299/304 (98.36%), Postives = 302/304 (99.34%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEAD IEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADPSVKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD
Sbjct: 241 KVHAAIRADPSVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300

Query: 301 EDDE 305
           ++D+
Sbjct: 301 DEDD 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL
Match: A0A6J1GXQ9 (60S ribosomal protein L5 OS=Cucurbita moschata OX=3662 GN=LOC111458161 PE=3 SV=1)

HSP 1 Score: 565.1 bits (1455), Expect = 1.8e-157
Identity = 289/304 (95.07%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYR VVRFSNKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDV 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK LEMD+EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDEEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKD KQLDA+VHRKYI+GGHVAAYMRTLMEDEPEKYQ+HFS+YIKKGIEAD IEGLYK
Sbjct: 181 GFSKDGKQLDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSQYIKKGIEADNIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADP VKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNS ANAD+DDDDD
Sbjct: 241 KVHAAIRADPVVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSKANADEDDDDD 300

Query: 301 EDDE 305
           EDDE
Sbjct: 301 EDDE 304

[Close]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL
Match: A0A6J1G1K9 (60S ribosomal protein L5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111449844 PE=3 SV=1)

HSP 1 Score: 563.9 bits (1452), Expect = 4.0e-157
Identity = 299/337 (88.72%), Postives = 302/337 (89.61%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMR-------------------------------- 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMR                                
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRVRPCCLFVLMTCYLYPSKKLYKRLVTFYIWLH 240

Query: 241 -TLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKKVHAAIRADPSVKKSDKPPPKAHKRYN 300
            TLMEDEPEKYQTHFSEYIKKGIEAD IEGLYKKVHAAIRADPSVKKSDKP PKAHKRYN
Sbjct: 241 QTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYKKVHAAIRADPSVKKSDKPQPKAHKRYN 300

Query: 301 LKKLTYDERKARLVERLNALNSAANADDDDDDDEDDE 305
           LKKLTYDERKARLVERLNALNSAANADDDDDDD++D+
Sbjct: 301 LKKLTYDERKARLVERLNALNSAANADDDDDDDDEDD 337

[Close]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL
Match: A0A6J1KC97 (60S ribosomal protein L5 OS=Cucurbita maxima OX=3661 GN=LOC111493018 PE=3 SV=1)

HSP 1 Score: 562.0 bits (1447), Expect = 1.5e-156
Identity = 287/304 (94.41%), Postives = 297/304 (97.70%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYR VVRFSNKD+
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFSNKDV 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLK L+MD+EYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLDMDEEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHS+KRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSEKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKD KQLDA+VHRKYI+GGHVAAYMRTLMEDEPEKYQ+HFS+YIKKGIEAD IEGLYK
Sbjct: 181 GFSKDGKQLDAEVHRKYIFGGHVAAYMRTLMEDEPEKYQSHFSQYIKKGIEADNIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADP VKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNS A+AD+DDDDD
Sbjct: 241 KVHAAIRADPVVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSKAHADEDDDDD 300

Query: 301 EDDE 305
           EDDE
Sbjct: 301 EDDE 304

[Close]

BLAST of CmaCh18G006780 vs. NCBI nr
Match: XP_022966860.1 (60S ribosomal protein L5-like [Cucurbita maxima])

HSP 1 Score: 590.5 bits (1521), Expect = 8.3e-165
Identity = 304/304 (100.00%), Postives = 304/304 (100.00%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD
Sbjct: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300

Query: 301 EDDE 305
           EDDE
Sbjct: 301 EDDE 304

[Close]

BLAST of CmaCh18G006780 vs. NCBI nr
Match: XP_022945687.1 (60S ribosomal protein L5-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 580.9 bits (1496), Expect = 6.5e-162
Identity = 299/304 (98.36%), Postives = 302/304 (99.34%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEAD IEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADPSVKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD
Sbjct: 241 KVHAAIRADPSVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300

Query: 301 EDDE 305
           ++D+
Sbjct: 301 DEDD 304

[Close]

BLAST of CmaCh18G006780 vs. NCBI nr
Match: KAG6573600.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 580.1 bits (1494), Expect = 1.1e-161
Identity = 302/305 (99.02%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEAD IEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDD- 300
           KVHAAIRADPSVKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDD 
Sbjct: 241 KVHAAIRADPSVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDE 300

Query: 301 DEDDE 305
           DEDDE
Sbjct: 301 DEDDE 305

[Close]

BLAST of CmaCh18G006780 vs. NCBI nr
Match: KAG7012684.1 (60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 577.4 bits (1487), Expect = 7.2e-161
Identity = 297/302 (98.34%), Postives = 300/302 (99.34%), Query Frame = 0


Query: 2   AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDIT 61
           AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDIT
Sbjct: 14  AFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDIT 73

Query: 62  AQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEG 121
           AQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEG
Sbjct: 74  AQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYEG 133

Query: 122 NVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAG 181
           NVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAG
Sbjct: 134 NVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFAG 193

Query: 182 FSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYKK 241
           FSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEAD IEGLYKK
Sbjct: 194 FSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYKK 253

Query: 242 VHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDDE 301
           VHAAIRADPSVKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDD++
Sbjct: 254 VHAAIRADPSVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDED 313

Query: 302 DD 304
           D+
Sbjct: 314 DE 315

[Close]

BLAST of CmaCh18G006780 vs. NCBI nr
Match: XP_023541888.1 (60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 577.0 bits (1486), Expect = 9.5e-161
Identity = 297/303 (98.02%), Postives = 300/303 (99.01%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI
Sbjct: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
           TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE
Sbjct: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEAD IEGLYK
Sbjct: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADDIEGLYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADP VKKSDKP PKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDD+
Sbjct: 241 KVHAAIRADPLVKKSDKPQPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDE 300

Query: 301 EDD 304
           +D+
Sbjct: 301 DDE 303

[Close]

BLAST of CmaCh18G006780 vs. TAIR 10
Match: AT3G25520.1 (ribosomal protein L5 )

HSP 1 Score: 488.8 bits (1257), Expect = 3.2e-138
Identity = 243/301 (80.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYR VVRF+NKDI
Sbjct: 1   MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGED+SVEP D+RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GF K++KQLDA++HR YIYGGHV+ YM+ L EDEPEK QTHFS YIKKG+EA+ IE LYK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEELYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRADP+ KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDD+DD+
Sbjct: 241 KVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

Query: 301 E 302
           E
Sbjct: 301 E 301

[Close]

BLAST of CmaCh18G006780 vs. TAIR 10
Match: AT5G39740.1 (ribosomal protein L5 B )

HSP 1 Score: 485.3 bits (1248), Expect = 3.5e-137
Identity = 240/301 (79.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYR VVRF+NKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGED+SVEP D+RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GF K++KQLDA++HR YIYGGHV+ YM+ L EDEPEK QTHFS YIKKG+EA+ IE +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRA+P+ KK++K  PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDD+DD+
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

Query: 301 E 302
           E
Sbjct: 301 E 301

[Close]

BLAST of CmaCh18G006780 vs. TAIR 10
Match: AT5G39740.2 (ribosomal protein L5 B )

HSP 1 Score: 485.3 bits (1248), Expect = 3.5e-137
Identity = 240/301 (79.73%), Postives = 272/301 (90.37%), Query Frame = 0


Query: 1   MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRIVVRFSNKDI 60
           M F K+ K+ AYFKRYQVKF+RRR+GKTDYRARIRLINQDKNKYNTPKYR VVRF+NKDI
Sbjct: 1   MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 60

Query: 61  TAQIISASIAGDLVLASAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKQLEMDDEYE 120
            AQI+SASIAGD+V ASAY+HELP+YGL VGLTNYAAAYCTGLLLARRVLK LEMDDEYE
Sbjct: 61  VAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYE 120

Query: 121 GNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDIPHSDKRFA 180
           GNVEATGED+SVEP D+RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDIPHSDKRFA
Sbjct: 121 GNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFA 180

Query: 181 GFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEADGIEGLYK 240
           GF K++KQLDA++HR YIYGGHV+ YM+ L EDEPEK QTHFS YIKKG+EA+ IE +YK
Sbjct: 181 GFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEAESIEEMYK 240

Query: 241 KVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAANADDDDDDD 300
           KVHAAIRA+P+ KK++K  PK HKRYNLKKLTY+ERK +L+ER+ ALN A   DDD+DD+
Sbjct: 241 KVHAAIRAEPNHKKTEKSAPKEHKRYNLKKLTYEERKNKLIERVKALNGAGGDDDDEDDE 300

Query: 301 E 302
           E
Sbjct: 301 E 301

[Close]

BLAST of CmaCh18G006780 vs. TAIR 10
Match: AT3G25520.2 (ribosomal protein L5 )

HSP 1 Score: 305.8 bits (782), Expect = 3.8e-83
Identity = 149/189 (78.84%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 113 LEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLLKTTTGNRVFGALKGALDGGLDI 172
           LEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGL++TTTGNRVFGALKGALDGGLDI
Sbjct: 2   LEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDI 61

Query: 173 PHSDKRFAGFSKDSKQLDADVHRKYIYGGHVAAYMRTLMEDEPEKYQTHFSEYIKKGIEA 232
           PHSDKRFAGF K++KQLDA++HR YIYGGHV+ YM+ L EDEPEK QTHFS YIKKG+EA
Sbjct: 62  PHSDKRFAGFHKENKQLDAEIHRNYIYGGHVSNYMKLLGEDEPEKLQTHFSAYIKKGVEA 121

Query: 233 DGIEGLYKKVHAAIRADPSVKKSDKPPPKAHKRYNLKKLTYDERKARLVERLNALNSAAN 292
           + IE LYKKVHAAIRADP+ KK+ KP PK HKRYNLKKLTY+ERK +L+ER+ ALN A  
Sbjct: 122 ESIEELYKKVHAAIRADPNPKKTVKPAPKQHKRYNLKKLTYEERKNKLIERVKALNGAGG 181

Query: 293 ADDDDDDDE 302
            DDD+DD+E
Sbjct: 182 DDDDEDDEE 190

The following BLAST results are available for this feature:

BLAST of CmaCh18G006780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6UNT2	1.7e-152	91.78	60S ribosomal protein L5 OS=Cucumis sativus OX=3659 GN=RPL5 PE=2 SV=1	[more]
A2WXX3	3.1e-138	80.73	60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica OX=39946 GN=RPL5A PE=3 ...	[more]
Q8L4L4	6.9e-138	81.06	60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5B PE=...	[more]
Q0JGY1	8.9e-138	80.73	60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL5A PE=...	[more]
Q8LBI1	4.4e-137	80.73	60S ribosomal protein L5-1 OS=Arabidopsis thaliana OX=3702 GN=RPL5A PE=1 SV=2	[more]

BLAST of CmaCh18G006780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HSR8	4.0e-165	100.00	60S ribosomal protein L5-like OS=Cucurbita maxima OX=3661 GN=LOC111466439 PE=3 S...	[more]
A0A6J1G1M2	3.2e-162	98.36	60S ribosomal protein L5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1GXQ9	1.8e-157	95.07	60S ribosomal protein L5 OS=Cucurbita moschata OX=3662 GN=LOC111458161 PE=3 SV=1	[more]
A0A6J1G1K9	4.0e-157	88.72	60S ribosomal protein L5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1KC97	1.5e-156	94.41	60S ribosomal protein L5 OS=Cucurbita maxima OX=3661 GN=LOC111493018 PE=3 SV=1	[more]

BLAST of CmaCh18G006780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966860.1	8.3e-165	100.00	60S ribosomal protein L5-like [Cucurbita maxima]	[more]
XP_022945687.1	6.5e-162	98.36	60S ribosomal protein L5-like isoform X2 [Cucurbita moschata]	[more]
KAG6573600.1	1.1e-161	99.02	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7012684.1	7.2e-161	98.34	60S ribosomal protein L5, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023541888.1	9.5e-161	98.02	60S ribosomal protein L5-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh18G006780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G25520.1	3.2e-138	80.73	ribosomal protein L5	[more]
AT5G39740.1	3.5e-137	79.73	ribosomal protein L5 B	[more]
AT5G39740.2	3.5e-137	79.73	ribosomal protein L5 B	[more]
AT3G25520.2	3.8e-83	78.84	ribosomal protein L5	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PRINTS	PR00058	RIBOSOMALL5	coord: 164..183 score: 70.0 coord: 20..39 score: 76.25 coord: 84..104 score: 83.33 coord: 206..226 score: 49.4 coord: 43..62 score: 72.19 coord: 144..163 score: 72.19
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PFAM	PF17144	Ribosomal_L5e	coord: 14..175 e-value: 9.1E-82 score: 272.9
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	PANTHER	PTHR23410	RIBOSOMAL PROTEIN L5-RELATED	coord: 1..298
IPR005485	Ribosomal protein L5 eukaryotic/L18 archaeal	HAMAP	MF_01337_A	Ribosomal_L18_A	coord: 14..246 score: 21.877895
IPR025607	Ribosomal protein L5 eukaryotic/L18 archaeal, C-terminal	PFAM	PF14204	Ribosomal_L18_c	coord: 191..281 e-value: 2.3E-35 score: 121.4
None	No IPR available	GENE3D	3.30.420.100		coord: 1..291 e-value: 2.0E-146 score: 489.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..269
None	No IPR available	PANTHER	PTHR23410:SF28	SUBFAMILY NOT NAMED	coord: 1..298
None	No IPR available	CDD	cd00432	Ribosomal_L18_L5e	coord: 41..170 e-value: 5.85622E-27 score: 99.5367
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 11..251

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G006780.1	CmaCh18G006780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome